Metagenome / Metatranscriptome Family F097916

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	77 residues
Representative Sequence	MSKRGIALAGAVLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Number of Associated Samples	86
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.88 %
% of genes near scaffold ends (potentially truncated)	25.96 %
% of genes from short scaffolds (< 2000 bps)	65.38 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.731 % of family members)
Environment Ontology (ENVO)	Unclassified (56.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.28% β-sheet: 0.00% Coil/Unstructured: 54.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07690	MFS_1	34.62
PF03825	Nuc_H_symport	19.23
PF06439	3keto-disac_hyd	6.73
PF00437	T2SSE	2.88
PF01408	GFO_IDH_MocA	2.88
PF00296	Bac_luciferase	0.96
PF01261	AP_endonuc_2	0.96
PF13618	Gluconate_2-dh3	0.96
PF00691	OmpA	0.96
PF01872	RibD_C	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	19.23
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.96
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.96
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	91.35 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	91.35 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	43.27 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	42.31 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	42.31 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	40.38 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	2.88 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	42.31 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	40.38 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	2.88 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	40.38 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	19.23 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	2.88 %
Unclassified	root	N/A	2.88 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.92 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	40.38 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	19.23 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	2.88 %
Unclassified	root	N/A	2.88 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_138988_len_8009_cov_18_135597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8059	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig67225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig44361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1617	Open in IMG/M
2140918007\|ConsensusfromContig155924	Not Available	717	Open in IMG/M
2140918007\|ConsensusfromContig6613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1763	Open in IMG/M
3300000880\|AL20A1W_1022238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2973	Open in IMG/M
3300001406\|JGI20187J14854_1003722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	916	Open in IMG/M
3300001409\|JGI20185J14861_1010713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300001532\|A20PFW1_1196718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300001565\|A35518A_1114050	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300004114\|Ga0062593_102723961	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005444\|Ga0070694_100143979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1734	Open in IMG/M
3300005458\|Ga0070681_10298490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1521	Open in IMG/M
3300005545\|Ga0070695_100013208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4962	Open in IMG/M
3300005549\|Ga0070704_100187389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1660	Open in IMG/M
3300005947\|Ga0066794_10245116	Not Available	538	Open in IMG/M
3300006055\|Ga0097691_1000740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	26572	Open in IMG/M
3300006173\|Ga0070716_100544564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	864	Open in IMG/M
3300006864\|Ga0066797_1012235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2933	Open in IMG/M
3300007788\|Ga0099795_10045099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1584	Open in IMG/M
3300007788\|Ga0099795_10633471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300007821\|Ga0104323_127549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2324	Open in IMG/M
3300009029\|Ga0066793_10412954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	774	Open in IMG/M
3300009038\|Ga0099829_10026176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4091	Open in IMG/M
3300009088\|Ga0099830_11354121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300009089\|Ga0099828_11001657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	744	Open in IMG/M
3300009090\|Ga0099827_11330846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300009093\|Ga0105240_10335700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1718	Open in IMG/M
3300009098\|Ga0105245_10169400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2079	Open in IMG/M
3300009143\|Ga0099792_10196443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1144	Open in IMG/M
3300010040\|Ga0126308_10074209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2032	Open in IMG/M
3300011444\|Ga0137463_1030437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1971	Open in IMG/M
3300012019\|Ga0120139_1197825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300012189\|Ga0137388_10002170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	12258	Open in IMG/M
3300012199\|Ga0137383_10088188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2246	Open in IMG/M
3300012200\|Ga0137382_10408667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	957	Open in IMG/M
3300012202\|Ga0137363_11507866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300012205\|Ga0137362_10534178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1013	Open in IMG/M
3300012208\|Ga0137376_10240396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1570	Open in IMG/M
3300012208\|Ga0137376_10535711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300012211\|Ga0137377_10006460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9486	Open in IMG/M
3300012361\|Ga0137360_10265973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1413	Open in IMG/M
3300012361\|Ga0137360_10428164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1119	Open in IMG/M
3300012361\|Ga0137360_10885591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	769	Open in IMG/M
3300012683\|Ga0137398_10108050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1759	Open in IMG/M
3300012683\|Ga0137398_10112133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1730	Open in IMG/M
3300012685\|Ga0137397_10182714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1558	Open in IMG/M
3300012923\|Ga0137359_10093969	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300012923\|Ga0137359_10242693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1607	Open in IMG/M
3300013104\|Ga0157370_11217250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300014052\|Ga0120109_1162059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300014056\|Ga0120125_1136242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300015192\|Ga0167646_1001504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8382	Open in IMG/M
3300015192\|Ga0167646_1010617	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300015197\|Ga0167638_1083318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300015199\|Ga0167647_1031350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1557	Open in IMG/M
3300018051\|Ga0184620_10036564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1320	Open in IMG/M
3300019865\|Ga0193748_1000455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2074	Open in IMG/M
3300019877\|Ga0193722_1015154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1981	Open in IMG/M
3300019879\|Ga0193723_1009308	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3182	Open in IMG/M
3300019880\|Ga0193712_1117650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300019881\|Ga0193707_1007991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3624	Open in IMG/M
3300019881\|Ga0193707_1180321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300019883\|Ga0193725_1002477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5352	Open in IMG/M
3300019883\|Ga0193725_1026196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1574	Open in IMG/M
3300019886\|Ga0193727_1001926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8688	Open in IMG/M
3300019886\|Ga0193727_1002909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7201	Open in IMG/M
3300019887\|Ga0193729_1005686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5937	Open in IMG/M
3300019887\|Ga0193729_1022222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	2741	Open in IMG/M
3300019887\|Ga0193729_1036936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2036	Open in IMG/M
3300019888\|Ga0193751_1012935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4326	Open in IMG/M
3300019888\|Ga0193751_1136275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	897	Open in IMG/M
3300019999\|Ga0193718_1066420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300020002\|Ga0193730_1029217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1597	Open in IMG/M
3300020002\|Ga0193730_1141926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300020006\|Ga0193735_1004934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4286	Open in IMG/M
3300020006\|Ga0193735_1113805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	742	Open in IMG/M
3300020012\|Ga0193732_1008961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1731	Open in IMG/M
3300020021\|Ga0193726_1003365	All Organisms → cellular organisms → Bacteria	10205	Open in IMG/M
3300020059\|Ga0193745_1108763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300020061\|Ga0193716_1029518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2688	Open in IMG/M
3300021363\|Ga0193699_10008912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3598	Open in IMG/M
3300021411\|Ga0193709_1111735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300021415\|Ga0193694_1004754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1829	Open in IMG/M
3300024290\|Ga0247667_1081743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300025457\|Ga0208850_1000197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	20362	Open in IMG/M
3300025505\|Ga0207929_1000594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9820	Open in IMG/M
3300025505\|Ga0207929_1000616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9662	Open in IMG/M
3300025579\|Ga0207927_1007213	Not Available	3997	Open in IMG/M
3300025949\|Ga0207667_10044532	All Organisms → cellular organisms → Bacteria	4702	Open in IMG/M
3300026223\|Ga0209840_1004622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3069	Open in IMG/M
3300026271\|Ga0209880_1097418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300027667\|Ga0209009_1056054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	986	Open in IMG/M
3300027875\|Ga0209283_10927984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300028047\|Ga0209526_10152752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1616	Open in IMG/M
3300028828\|Ga0307312_10433064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	865	Open in IMG/M
3300028828\|Ga0307312_11021590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300028881\|Ga0307277_10146548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1022	Open in IMG/M
3300028884\|Ga0307308_10271074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300030991\|Ga0073994_12288796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1044	Open in IMG/M
3300031740\|Ga0307468_100072259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1922	Open in IMG/M
3300033412\|Ga0310810_10017179	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8650	Open in IMG/M
3300034125\|Ga0370484_0085520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300034268\|Ga0372943_0100644	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.23%
Plants	Host-Associated → Plants	3.85%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Sediment	Environmental → Aquatic → Sediment	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.73%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	17.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	4.81%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001406	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012	Environmental	Open in IMG/M
3300001409	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00861260	2088090008	Soil	MTNLIEAFISKRGIAVASAILTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMTVADSATARQQRMLDTSQQNP
P3_CLC_00401270	2124908041	Soil	MSKRGIALAGAALTLALAACAKEDESAESKPALTQREKDSILANSTIPGAKAVKKSMTVADSATARQQRMLDTSQQNP
A2_c1_00388140	2124908043	Soil	MSQRAITLSGVALTIALAGCGKDESAENKPVRTQREKDSILANSSIPYAGAVKKAMKVADSATARQGRMVDTTPESP
A_all_C_03240080	2140918007	Soil	MSQRGITLAGVALTIALAGCGKDESADTKPVRTQREKDSILANSTIPYAKAVKKAMTVADSATARQGRMVDTTPESP
A_all_C_02024390	2140918007	Soil	MTLAGVALTIALAGCGKDESVANKPVRTQREKDSILANSTIPYAKAVKKAMTVADSATARQGRMVDTTPETP
AL20A1W_10222382	3300000880	Permafrost	MSKRGIALAGAALALALAACGKDEPESKPVLTQREKDSIFANSTIPGARAVKKSMTVADSATARQQRMMDTSQQTP*
JGI20187J14854_10037222	3300001406	Arctic Peat Soil	MSKRGIALAAAALALALAACGKDEPETKPVLTQREKDSIFANSTIPGARAVKKSMTVADSATARQQRMMDTSQNP*
JGI20185J14861_10107132	3300001409	Arctic Peat Soil	VASAILTLALAACAKDESAENKPTLTQREKDSILANSTIPGARAVKKSMSVADSATARQQRMLDTSQQNP*
A20PFW1_11967182	3300001532	Permafrost	RGIALAGAALALALAACGKDEPESKPVLTQREKDSIFANSTIPGARAVKKSMTVADSATARQQRMMDTSQQTP*
A35518A_11140503	3300001565	Permafrost	MSKRGFALVAAALTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP*
Ga0062593_1027239612	3300004114	Soil	MSKRGIALAGAAIALALSACTKDEPENRPALTQREKDSILGGSTIPGAKAVKKSMTVADSVAARQQRMIDTAQ*
Ga0070694_1001439793	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRGMALLAAVLILALAACDSKDDSPNKNLALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0070681_102984903	3300005458	Corn Rhizosphere	MSKRGMALLAAVLILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0070695_1000132082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRGMALLGAVVILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0070704_1001873891	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRGMALLAAVLILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQN
Ga0066794_102451162	3300005947	Soil	MTNLIEAFISKRGIAVASAILTLALAACGKEESAENKPTLTQREKDSILANSTIPGARAVKKSMSVADSATARQTRMLDTAPYNP*
Ga0097691_100074011	3300006055	Arctic Peat Soil	MTNLIEAFISKRGIAVASAILTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSAAARQARMLDTAQQNP*
Ga0070716_1005445642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRGMAVFGAVLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP*
Ga0066797_10122352	3300006864	Soil	MSKRGIALAGAALTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSATARQQRMLDTSQQNP*
Ga0099795_100450993	3300007788	Vadose Zone Soil	MSKRVIALAGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0099795_106334711	3300007788	Vadose Zone Soil	MLKRVIALAGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0104323_1275493	3300007821	Soil	MTNLIEAFISKRGIAVASAILTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSATARQQRMLDTSQQNP*
Ga0066793_104129541	3300009029	Prmafrost Soil	MTNLIEAFISKRGIAVASAILTLALAACAKDESAENKPTLTQREKDSILANSQIPGAKAVKKSMTVADSAAARQARMLDTAQ
Ga0099829_100261762	3300009038	Vadose Zone Soil	MSKRGIALAGAVLTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP*
Ga0099830_113541211	3300009088	Vadose Zone Soil	MSKRGIALAGAVLTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMVDTGQQNP*
Ga0099828_110016572	3300009089	Vadose Zone Soil	SKRGIALAGAVLTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP*
Ga0099827_113308461	3300009090	Vadose Zone Soil	MSKRRIALACTALTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMVDTGQQNP*
Ga0105240_103357002	3300009093	Corn Rhizosphere	MALLAAVLILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0105245_101694002	3300009098	Miscanthus Rhizosphere	MSKRGMALLAAVLILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0099792_101964432	3300009143	Vadose Zone Soil	MSKRGIALAGASLTLALAACDSKDDSPNKNPALTQRESDSLFANSTIPCAKAVKKSVSAADSVAARQGRMSDTGEHNP*
Ga0126308_100742093	3300010040	Serpentine Soil	MEIRGIALSGAVLAFALAACAGDEDQNRPARSQREKDSILAGSQIPGARAVKKTLTAADSAAARQ
Ga0137463_10304373	3300011444	Soil	MSKRGFAVVGSAFTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMADTGQQNP*
Ga0120139_11978252	3300012019	Permafrost	MSKRGIAVVGAALTFALAACGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMADTGQQNP*
Ga0137388_1000217013	3300012189	Vadose Zone Soil	MSKRGIALAGAVLTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVA
Ga0137383_100881882	3300012199	Vadose Zone Soil	MSKRGIALAGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQIP*
Ga0137382_104086673	3300012200	Vadose Zone Soil	MSKRGIALAGAFLTLALAGCDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQIP*
Ga0137363_115078662	3300012202	Vadose Zone Soil	MIEASMSKREIALGGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0137362_105341783	3300012205	Vadose Zone Soil	MIEASMSKRGIALGGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQ
Ga0137376_102403962	3300012208	Vadose Zone Soil	MSKRGIALVGAFLALAACTKDEPDQSKTQLTQREKDSILANSTIPGAKAVKKTLSTADSAAARQARIDSSQQNP*
Ga0137376_105357112	3300012208	Vadose Zone Soil	MTKPRAAFAGAVLALVFAACAKDEPEQTQTVRTQREKDSILANSTIPGAKAVKKSMTVADSVAARQSRMSDTGQQNP*
Ga0137377_100064604	3300012211	Vadose Zone Soil	MTKPRAAFAGAVLALVFAACAKDEPEQTQTVRTQREKDSILANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP*
Ga0137360_102659733	3300012361	Vadose Zone Soil	MIEASMSKRGIALGGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0137360_104281641	3300012361	Vadose Zone Soil	HLIEPSMSKRGIALAGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQIP*
Ga0137360_108855913	3300012361	Vadose Zone Soil	MSKRRIALACTALTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMV
Ga0137398_101080502	3300012683	Vadose Zone Soil	GAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNR*
Ga0137398_101121333	3300012683	Vadose Zone Soil	MSKRVIALAGAFLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP*
Ga0137397_101827141	3300012685	Vadose Zone Soil	MIEASMSKRGMALLGAVLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0137359_100939693	3300012923	Vadose Zone Soil	LALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0137359_102426933	3300012923	Vadose Zone Soil	MSKRGIALAGAFLTLALAACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMS
Ga0157370_112172502	3300013104	Corn Rhizosphere	LIEAPMSKRGMALLGAVVILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP*
Ga0120109_11620592	3300014052	Permafrost	IAVVGAALTFALAACGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQIP*
Ga0120125_11362422	3300014056	Permafrost	MSKRGIALAGAVLTLALVACDKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKTMTVADSVAARQGRMSDTGQQIP*
Ga0167646_10015046	3300015192	Glacier Forefield Soil	MKRYIVVSFSGVESFMSKRGIALAGAIFTLALAACGKDESAENKPVLTQREKDSILANSTIPGARAVKKSMTVADSATARQQRMLDTAPQNP*
Ga0167646_10106173	3300015192	Glacier Forefield Soil	MSKRAIALAGAVLTLALVGCGKDESAENKPALTQREKDSILANSTIPGARAVKKSMTVADSATARQQRMLDTSQQNP*
Ga0167638_10833182	3300015197	Glacier Forefield Soil	MSQRGITLAGVALIIIALAGCGKDEAVENKPVRTQREKDSILANSSIPYAGAVKKAMKVADSATARQGRMVDTTPETP*
Ga0167647_10313503	3300015199	Glacier Forefield Soil	MSKRAIALAGTVLTLALVGCGKDESAENKPALTQREKDSILANSTIPGARAVKKSMTVADSATARQQRMLDTSQQNP*
Ga0184620_100365642	3300018051	Groundwater Sediment	MSKRRIAFAGAALTLALAACTKDEPDNRAALTQREKDSILGASTIPGAKAVKKTLTVADSVAARQQRMIDTAQ
Ga0193748_10004551	3300019865	Soil	MVKRGFALVGAAVTLALAACDTKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMS
Ga0193722_10151543	3300019877	Soil	MSKRGIALAGAFLTLAFAACDSKDDSPNKNPALTQRERDSIFGNSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193723_10093084	3300019879	Soil	MSKRGIAILGAVLTLALAACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193712_11176501	3300019880	Soil	MSKRRIALAGAAVALALAACAKDEPDNRAALTQREKDSILGASTIPGGKAVKKSMTVADSVA
Ga0193707_10079914	3300019881	Soil	MSKRGIALAAVALALALAACDDKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP
Ga0193707_11803211	3300019881	Soil	KTGTTTPFHQHAHLIEATMSKRGIAVVGAVLTLALVACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193725_10024772	3300019883	Soil	MSKRGLALAGALLTLAVAACDSKDDSPNKNPALTQRERDSIFGNSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0193725_10261962	3300019883	Soil	MSKRGIALLGAVLTLAPVACDSKDDSLNKNPALTQRARDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193727_10019269	3300019886	Soil	MSKRGIALAGAALALALAACTKDEPENRPALTQREKDSILGGSTIPGAKAVKKSMTVADSVAARQGRMIDTAP
Ga0193727_10029094	3300019886	Soil	MSKRGIALAGAVITLALAACDTKDDSPNKNPALTQRERDSIFGNSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0193729_10056863	3300019887	Soil	MSKRGFALAVAALTLALAACEGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193729_10222223	3300019887	Soil	MSKRGIALAGAVLTLALGACDNKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193729_10369362	3300019887	Soil	MSKRGIAVVGAVLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMADTGQQNP
Ga0193751_10129354	3300019888	Soil	MSKRGIALAGAVLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193751_11362752	3300019888	Soil	MSKRGIPLAGVVLILAFAACDKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQIP
Ga0193718_10664201	3300019999	Soil	MVKRGFALVGAALTLALAACDTKDDSPNKNPALTQRERDSIFGNSTIPGAKAVKKSLSVADSVAARQGRMSDTGEHNP
Ga0193730_10292171	3300020002	Soil	MSKRGIAILGAVLTLALAACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQ
Ga0193730_11419262	3300020002	Soil	MSKRGIALAGAVLTLALGACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193735_10049342	3300020006	Soil	MSKRVIALAGAALTLAFAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0193735_11138051	3300020006	Soil	MSKRGIAILGAVLTLALAACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSLADSVAARQGRMSDTGQQ
Ga0193732_10089611	3300020012	Soil	MVKRGFALVGAALTLALAACDTKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0193726_10033651	3300020021	Soil	MSKRRIALAGAVLALALAGCAKDEPENRPALTQREKDSILGGSTIPGAKAVKKSMTVADSVAARQGRMID
Ga0193745_11087632	3300020059	Soil	MSKRRIAFAGAALTLALAACTKDEPDNRAALTQREKDSILGASTIPGAKAVKKTLTVADSVAA
Ga0193716_10295182	3300020061	Soil	MSQRGIILAGATLVLALAACGKDEPEVKPVRTQREKDSILANSSIPYAGAVKKAMKVADSATARQGRMVDTTPQDP
Ga0193699_100089125	3300021363	Soil	MSKRGIALAGAVLTLALGACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0193709_11117351	3300021411	Soil	MSKRRIALAGAAVALALAACAKDEPDNRAALTQREKDSILGGSTIPGAKAVKKTMTVADSVAARQQRMID
Ga0193694_10047542	3300021415	Soil	MSKRGFALAGAVLTLAFAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0247667_10817432	3300024290	Soil	MSKRGMALLAAVLILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0208850_100019711	3300025457	Arctic Peat Soil	MTNLIEAFISKRGIAVASAILTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSAAARQARMLDTAQQNP
Ga0207929_10005949	3300025505	Arctic Peat Soil	MSKRGIALAAAALALALAACGKDEPETKPVLTQREKDSIFANSTIPGARAVKKSMTVADSATARQQRMMDTSQNP
Ga0207929_10006163	3300025505	Arctic Peat Soil	MTNLIEAFISKRGIAVASAILTLALAACAKDESAENKPTLTQREKDSILANSTIPGARAVKKSMSVADSATARQQRMLDTSQQNP
Ga0207927_10072134	3300025579	Arctic Peat Soil	MTNLIEAFISKRGIAVASAILTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSATARQQRMLDTAQQNP
Ga0207667_100445325	3300025949	Corn Rhizosphere	MSKRGMALLGAVVILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0209840_10046224	3300026223	Soil	MSTRGIALAGAALTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSATARQQRMLDTSQQNP
Ga0209880_10974181	3300026271	Soil	MSKRGIALAGAALTLALAACAKEESAENKPTLTQREKDSILANSQIPGAKAVKKSMSVADSATARQQRMLDTSQQNP
Ga0209009_10560543	3300027667	Forest Soil	MSKRGMALLGALLTLALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQIP
Ga0209283_109279842	3300027875	Vadose Zone Soil	KRGIALAGAVLTLALAACDKDDSEAKRATLTQREKDSIFANSTIPGAKAVKKSMTVADSVAARQGRMSDTGQQNP
Ga0209526_101527523	3300028047	Forest Soil	MSKRGIALAGALLTLSLAACDKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMTVADSVAARQGRMVDTGQQNP
Ga0307312_104330641	3300028828	Soil	MSKRGITLAGAAVALALAACAKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMTVADSATARQQRMQDTS
Ga0307312_110215902	3300028828	Soil	PMVKRGFALVGAALTLALAACDTKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0307277_101465482	3300028881	Soil	MSKRGIAFAGAVLALALAACTKDEPDQSKTELTQREKDSIFANSTIPGAKAVKKTLSTADSAAARQARIDSSQQYP
Ga0307308_102710742	3300028884	Soil	TGAATPFYQHAHLIEASMSKRGIAILGAVLTLALAACDGKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0073994_122887962	3300030991	Soil	MSKRGIALAGAVLTLALGACDSKDDSPNKNPALTQRERDSIFANSTIPGARAVKKSMSVADSVAARQGRMSDTGQQNP
Ga0307468_1000722593	3300031740	Hardwood Forest Soil	MSTRGFALLGAALTLALAACDTKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0310810_100171797	3300033412	Soil	MSKRGMALLGAVFILALAACDSKDDSPNKNPALTQRERDSIFANSTIPGAKAVKKSMSVADSVAARQGRMSDTGEHNP
Ga0370484_0085520_87_317	3300034125	Untreated Peat Soil	MSKRGIALAAAALALALAACGKDEPETKPVLTQREKDSIFANSTIPGARAVKKSMTVADSATARQQRMMDTSQQNP
Ga0372943_0100644_452_676	3300034268	Soil	MPNRGFLLVALGLALSACAKDNADENKPVLSQREKDSVFANSQIPGARAVKKTLSTADSATARQTRIDSAQQNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences