Metagenome / Metatranscriptome Family F097852

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	74 residues
Representative Sequence	MTAKPKSIKGTGCKFGGCVRKAVEFTSGDLPFVPESGLRVERSILTGRQKSAAGVVVRQRMKAQTVLRKEGNGSGE
Number of Associated Samples	102
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.65 %
% of genes near scaffold ends (potentially truncated)	41.35 %
% of genes from short scaffolds (< 2000 bps)	82.69 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (19.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00078	RVT_1	25.00
PF08388	GIIM	21.15
PF13408	Zn_ribbon_recom	0.96
PF01502	PRA-CH	0.96
PF00118	Cpn60_TCP1	0.96
PF13180	PDZ_2	0.96
PF13620	CarboxypepD_reg	0.96
PF13561	adh_short_C2	0.96
PF05239	PRC	0.96
PF11994	DUF3489	0.96
PF00593	TonB_dep_Rec	0.96
PF01797	Y1_Tnp	0.96
PF00696	AA_kinase	0.96
PF13646	HEAT_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0139	Phosphoribosyl-AMP cyclohydrolase	Amino acid transport and metabolism [E]	0.96
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.15 %
Unclassified	root	N/A	15.38 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.38 %
Unclassified	root	N/A	15.38 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	14.42 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13.46 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.96 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.96 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	12.50 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.96 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	3.85 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	3.85 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.96 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.96 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	3.85 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	2.88 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.96 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.96 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Paraburkholderia sp. BL23I1N1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	3.85 %
Burkholderia sp. Ch1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	2.88 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pseudomonas oleovorans/pseudoalcaligenes group	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group	0.96 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.96 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Paraburkholderia sp. BL23I1N1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	3.85 %
Burkholderia sp. Ch1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	2.88 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pseudomonas oleovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group → Pseudomonas oleovorans	0.96 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.96 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.38 %
Unclassified	root	N/A	15.38 %
Paraburkholderia sp. BL23I1N1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	3.85 %
Burkholderia sp. Ch1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	2.88 %
bacterium BMS3Abin14	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1.92 %
Pseudomonas oleovorans CECT 5344	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group → Pseudomonas oleovorans → Pseudomonas oleovorans CECT 5344	0.96 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.96 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000897\|JGI12167J12862_102002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300001356\|JGI12269J14319_10201421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	783	Open in IMG/M
3300001593\|JGI12635J15846_10103517	All Organisms → cellular organisms → Bacteria → Acidobacteria	2037	Open in IMG/M
3300002538\|JGI24132J36420_10161868	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300003890\|Ga0063162_1001178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1890	Open in IMG/M
3300003938\|Ga0063230_11673414	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300004050\|Ga0055491_10008415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	1775	Open in IMG/M
3300004473\|Ga0068919_1409703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	540	Open in IMG/M
3300004477\|Ga0068971_1564515	All Organisms → cellular organisms → Bacteria → Acidobacteria	1098	Open in IMG/M
3300004609\|Ga0068958_1352014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	951	Open in IMG/M
3300004610\|Ga0068927_1349025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005174\|Ga0066680_10171047	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005332\|Ga0066388_100814272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	1524	Open in IMG/M
3300005436\|Ga0070713_100169549	All Organisms → cellular organisms → Bacteria → Acidobacteria	1955	Open in IMG/M
3300005454\|Ga0066687_10911027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005531\|Ga0070738_10056788	All Organisms → cellular organisms → Bacteria → Proteobacteria	2388	Open in IMG/M
3300005537\|Ga0070730_10006464	All Organisms → cellular organisms → Bacteria	10018	Open in IMG/M
3300005556\|Ga0066707_10204057	All Organisms → cellular organisms → Bacteria → Acidobacteria	1277	Open in IMG/M
3300005575\|Ga0066702_10656785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300005591\|Ga0070761_10721821	Not Available	625	Open in IMG/M
3300006041\|Ga0075023_100633855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	502	Open in IMG/M
3300006046\|Ga0066652_101642357	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300006174\|Ga0075014_100339507	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300009093\|Ga0105240_10705923	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300009177\|Ga0105248_10402016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300009522\|Ga0116218_1381270	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300009700\|Ga0116217_10071189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	2440	Open in IMG/M
3300009792\|Ga0126374_10075240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1823	Open in IMG/M
3300010081\|Ga0127457_1054129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300010147\|Ga0126319_1566492	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300010335\|Ga0134063_10035816	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300010373\|Ga0134128_10125970	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300010376\|Ga0126381_100545396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1642	Open in IMG/M
3300011049\|Ga0138554_160826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300011054\|Ga0138523_1046710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300011078\|Ga0138565_1041411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300011080\|Ga0138568_1180649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300011340\|Ga0151652_10177445	Not Available	910	Open in IMG/M
3300012199\|Ga0137383_10060521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2717	Open in IMG/M
3300012349\|Ga0137387_10447189	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012357\|Ga0137384_10391111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1149	Open in IMG/M
3300012389\|Ga0134040_1232196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group → Pseudomonas oleovorans → Pseudomonas oleovorans CECT 5344	2095	Open in IMG/M
3300012971\|Ga0126369_11090346	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300014200\|Ga0181526_10250307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	1130	Open in IMG/M
3300014490\|Ga0182010_10030531	All Organisms → cellular organisms → Bacteria → Acidobacteria	2495	Open in IMG/M
3300014491\|Ga0182014_10423988	Not Available	660	Open in IMG/M
3300014496\|Ga0182011_10658397	Not Available	663	Open in IMG/M
3300014501\|Ga0182024_10362766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	1889	Open in IMG/M
3300014502\|Ga0182021_11343524	Not Available	861	Open in IMG/M
3300015076\|Ga0167656_1017462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	851	Open in IMG/M
3300018001\|Ga0187815_10035273	Not Available	2117	Open in IMG/M
3300018476\|Ga0190274_13677840	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300019278\|Ga0187800_1050274	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300019487\|Ga0187893_10056383	All Organisms → cellular organisms → Bacteria → Proteobacteria	3903	Open in IMG/M
3300020070\|Ga0206356_10082645	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300020195\|Ga0163150_10184159	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300020213\|Ga0163152_10166100	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300021861\|Ga0213853_10931855	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300022504\|Ga0242642_1071262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL23I1N1	572	Open in IMG/M
3300022506\|Ga0242648_1069786	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300025619\|Ga0207926_1101136	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300025934\|Ga0207686_10638687	Not Available	841	Open in IMG/M
3300026315\|Ga0209686_1037025	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300026532\|Ga0209160_1074445	All Organisms → cellular organisms → Bacteria → Acidobacteria	1819	Open in IMG/M
3300026552\|Ga0209577_10168620	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1706	Open in IMG/M
3300027432\|Ga0209421_1065227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300027654\|Ga0209799_1118008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300027727\|Ga0209328_10195897	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300027857\|Ga0209166_10003400	All Organisms → cellular organisms → Bacteria → Acidobacteria	11504	Open in IMG/M
3300027887\|Ga0208980_10187767	Not Available	1208	Open in IMG/M
3300027903\|Ga0209488_11009764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300027905\|Ga0209415_10040523	All Organisms → cellular organisms → Bacteria → Acidobacteria	6320	Open in IMG/M
3300029817\|Ga0247275_1011142	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300029957\|Ga0265324_10055221	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin14	1362	Open in IMG/M
3300029994\|Ga0302283_1057868	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300030815\|Ga0265746_1014500	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300031231\|Ga0170824_111165152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	989	Open in IMG/M
3300031234\|Ga0302325_10433382	All Organisms → cellular organisms → Bacteria → Acidobacteria	2027	Open in IMG/M
3300031234\|Ga0302325_12552652	Not Available	608	Open in IMG/M
3300031543\|Ga0318516_10236189	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300031708\|Ga0310686_102438140	Not Available	877	Open in IMG/M
3300031712\|Ga0265342_10276492	Not Available	890	Open in IMG/M
3300031726\|Ga0302321_103508077	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300031736\|Ga0318501_10345669	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031747\|Ga0318502_10152882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300031754\|Ga0307475_10602565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	879	Open in IMG/M
3300031765\|Ga0318554_10222019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1076	Open in IMG/M
3300031792\|Ga0318529_10417311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031794\|Ga0318503_10200742	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300031805\|Ga0318497_10078407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1747	Open in IMG/M
3300031880\|Ga0318544_10071937	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300031890\|Ga0306925_10429276	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300031954\|Ga0306926_10348161	All Organisms → cellular organisms → Bacteria → Acidobacteria	1832	Open in IMG/M
3300031962\|Ga0307479_11330484	Not Available	679	Open in IMG/M
3300032008\|Ga0318562_10511464	Not Available	696	Open in IMG/M
3300032035\|Ga0310911_10783964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300032044\|Ga0318558_10674594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300032783\|Ga0335079_10216615	All Organisms → cellular organisms → Bacteria → Acidobacteria	2118	Open in IMG/M
3300032783\|Ga0335079_12359710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300032829\|Ga0335070_11213837	Not Available	692	Open in IMG/M
3300032892\|Ga0335081_11837825	Not Available	654	Open in IMG/M
3300032896\|Ga0335075_10097997	All Organisms → cellular organisms → Bacteria → Proteobacteria	3852	Open in IMG/M
3300033289\|Ga0310914_10891702	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300033405\|Ga0326727_10196609	Not Available	2218	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.69%
Aquatic	Environmental → Aquatic	12.50%
Plants	Host-Associated → Plants	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Peat	Environmental → Terrestrial → Peat	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Marine	Environmental → Aquatic → Marine	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	8.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Lake	Environmental → Aquatic → Freshwater → Lake	1.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.88%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.92%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.96%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000897	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300003938	Wetland microbial communities from Twitchell Island in the Sacramento Delta, California, USA - surface sediment Aug2011 Site C1 Bulk Metatranscriptome (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004609	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004610	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011049	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 35 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011054	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011080	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015076	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6a, vegetation/snow interface)	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12167J12862_1020022	3300000897	Forest Soil	LTAKPISIKGTGCKFGGCARKAVELTSGDLSLVAKSRLGVERSILTGWEKSAEGKVLTKVRKARTVLRKEGKGSGE*
JGI12269J14319_102014212	3300001356	Peatlands Soil	MSGQVTVKSISIKGTGCKFGGCVRKAVELTSGDLPFVSESRLRIERSVLTGRQKSAAGVVVAKAAKAQTVSARG*
JGI12635J15846_101035172	3300001593	Forest Soil	MITKSIFIKRAGCKFGGCVWKAVELTSGDLPFAVDAWLRIERSVLTGRQKSAEGVQPGNPVKARTVLREQGKGSGE*
JGI24132J36420_101618681	3300002538	Arctic Peat Soil	VSGERANDREAHSIKGTGCKFGGCVRKVVELTSGDLPSVRDTGLRIERSVLTGRQKSAAGVVVRRRTKTQTVLRKEGNGSGE*
Ga0063162_10011781	3300003890	Hot Spring Sediments	LIAKPLSIEGMGCKSGGCALKAVKLTSGDLPLVLDTGLRIERLVLTGRQKSAADEVVRRRTKVQTVLRKEGKGKGK*
Ga0063230_116734142	3300003938	Wetland	MTAKPISIKGTGCKFGGCVRKAVDLTSGDLPLVRNTGLRIERSILTGRQKSAAGVVVRQRMKAQTVLRKEGNGSGE*
Ga0055491_100084152	3300004050	Natural And Restored Wetlands	MTAKSISIKGTGCKPGGCAPKAVELTSGDLPFVPDSGLRVEGSILTGRQKSAEGILIPVYGMKARTVPARG*
Ga0068919_14097031	3300004473	Peatlands Soil	KPLSIKGTGCKSGGCVPKAVELTSGDLPSVPESRLGVERSILTGRQKSAEGVVVPEDGMKARTALRKQVKGSGE*
Ga0068971_15645152	3300004477	Peatlands Soil	MTAKPLSIKGAGCKSAGCARKAVELTSGDLPFVPESGLRVERSILTGRQKSATGKVGRELPKAQTVLRQEGKGSGE*
Ga0068958_13520142	3300004609	Peatlands Soil	KPLSIKGTGCKSGGCVPKAVELTSGDLPSVPESRLGVERSILTGRQKSAEGVVVPEDGMKALTALRKQVKGSGE*
Ga0068927_13490251	3300004610	Peatlands Soil	LIAKPLSIKGTGCKSAGCARKAVELTSGDLPFVPESGLRVERSILTGRQKSATGKVGRELPKAQTVLRQEGKGSGE*
Ga0066680_101710472	3300005174	Soil	MTAKPISIKGAGCKFGGCVRKATELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE*
Ga0066388_1008142722	3300005332	Tropical Forest Soil	MTAKSVSIKGTGCKFGGCASKADELTSGDLLLVSESKLGIERSILTGQQESAEGVLAAQAVKARTVPARG*
Ga0070713_1001695492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKPVSIKGAGCKFGGCVRKAVELTSGDLPFVSESRLRVERSVLTGRQKSAEGVVTVQTAKARTVLARG*
Ga0066687_109110271	3300005454	Soil	GCKFGGCVRKATELTSGDLPFVSVETEGEAFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE*
Ga0070738_100567882	3300005531	Surface Soil	MTTKSLSIKSLDCKSGGCVQKAVELTSGDLPFAVDSRLRVERSALIRRQKSAEGVLAAQAVKARTVLREQGKGSGE*
Ga0070730_100064646	3300005537	Surface Soil	MIAKPISIKGTERKFGGCAWKAVELTSGGLSLVVEIRLGVERLTLTGRQKSAAGIVVQQAGMKAQTVLRKESKGRGK*
Ga0066707_102040572	3300005556	Soil	KPISIKGTGCKFGGCVRKAVELTSGDLPFVLESGLRVERSILTGRQKSAEGVLGTQVLKARTVPARG*
Ga0066702_106567851	3300005575	Soil	MTAKPISIQGTGCKFGGCVRKAVELTSGDLPFVRKSGLRAKRFVLTGRQKSAEGVVGTQVLKARTVLRKQVNGSGE*
Ga0070761_107218212	3300005591	Soil	KPISIKGTGCKFGGCVRKAVELTSGDLPFVSESRLRMERSVLTGRQKSAEGVVVAQAMKAQTVPRKGVNGSGK*
Ga0075023_1006338552	3300006041	Watersheds	ISIKGTGCKSGGCVRKAVELTSGDLPLVVESQLRVEQSVLIGRQKSAAGVVVTKVMKAQTVPARG*
Ga0066652_1016423571	3300006046	Soil	MTAKPISIKGAGCKFGGCVRKAAELTSGDLPFVSESRLRWKRFLLTGRQKSAEGEVVRQRMKARTVI
Ga0075014_1003395072	3300006174	Watersheds	MTAKPKSIKGTGCKFGGCVRKAVEFTSGDLPFVPESGLRVERSILTGRQKSAAGVVVRQRMKAQTVLRKEGNGSGE*
Ga0105240_107059232	3300009093	Corn Rhizosphere	MTTKSASIKGLERRFGGCVRKAVELTSGDLPFAVDSRLRVERSVLTGRQKSAEGVVTARAVKARTVLRKQGKGSGK*
Ga0105248_104020161	3300009177	Switchgrass Rhizosphere	VPDELANDNKVHIHQGPGCKSGGCAAKAVELTSGDLPFVPESGLRAKRFVLTGRQKSAKGVLGTQVPKARTVLRKQVNGSGE*
Ga0116218_13812702	3300009522	Peatlands Soil	MTMKPLSIKGTGCKSGGCVPKAVEFTSGDLPSVPESRLGVERSILTGRQKSAEGVVVPEDGMKARTALRKQVKGSGE*
Ga0116217_100711893	3300009700	Peatlands Soil	MTMKPLSIKGTGCKSGGCVPKAVELTSGDLPSVPESRLGVERSILTGRQKSAEGVVVPEDGMKARTALRKQVKGSGE*
Ga0126374_100752402	3300009792	Tropical Forest Soil	MTAKSVSIKGTGCKFGGCALKADELTSGDLPLVPESGLRDERSALTGRQKSAEGEVVAQATKARTVPARG*
Ga0127457_10541292	3300010081	Grasslands Soil	MTAKPISIKGTGCKFGGCVRKAAELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE*
Ga0126319_15664921	3300010147	Soil	MYKNRIKGIRRRASWQMTTKPISIKGAGCKFGGCARKAVELTSGDLPFVVESRLRIERLILTGRQKSAEGVVVTQVAKARTVPARG*
Ga0134063_100358162	3300010335	Grasslands Soil	MTAKPISIKGAGCKFGGCVRKAAELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE*
Ga0134128_101259703	3300010373	Terrestrial Soil	MYKNRIKGIRRRARWQMTMKPISIKGAGCKFGGCARKAVELTSGDLPFVVKSRLRIERLILTGRQKSAEGVVVTQVTKARTVPARG*
Ga0126381_1005453962	3300010376	Tropical Forest Soil	IRCRTSGQLTAKSVSIKGTGCKFGGCALKADELTSGDLPLVPESGLRDEQSTLTGRQKSAKGEVAAQAAKARTVPARG*
Ga0138554_1608262	3300011049	Peatlands Soil	SIKGAGCKSDGCVRKAVELTSGDLLSVSESGLRVERSILTGRQKSATGKVGRELPKAQTVLRQEGKGSGE*
Ga0138523_10467101	3300011054	Peatlands Soil	SIKGAGCKSAGCARKAVELTSGDLPFVPESGLRVERSILTGRQKSATGKVGRELPKAQTVLRQEGKGSGE*
Ga0138565_10414112	3300011078	Peatlands Soil	RCRASGLMTAKPISIKGTGCKFGGCVRKAVELTSGDLPLVPESRLGVERSILTGRQKSAEGVVVPEDGMKARTALRKQVKGSGE*
Ga0138568_11806491	3300011080	Peatlands Soil	PLSIKGTGCKSGGCVPKAVELTSGDLPSVPESRLGVERSILTGRQKSAEGVVVPEDGMKARTALRKQVKGSGE*
Ga0151652_101774452	3300011340	Wetland	LTAKPISIKGTGCKSGGCAPKAVELTSGDLLLVPESGLRRERFLLTGRQKSAEGVVVPKGMKARTVLRKEGNGSGK*
Ga0137383_100605212	3300012199	Vadose Zone Soil	MITKSLSIKGLGCKSGGCVRKAVELTSGDLPFAVDSRPRVERSVLTGRQKSAEGVLAAQAVKARTVLHEQGKGSGE*
Ga0137387_104471892	3300012349	Vadose Zone Soil	MTTKPISIKGAGCKFGGCAQKAVELTSGDLPFVVNSRLRIERLILTGRQKSAEGVVVTPVTKARTVPARG*
Ga0137384_103911111	3300012357	Vadose Zone Soil	MITKSLSIKGLGCKSGGCVRKAVELTSGDLPFAVDSRPRVERSVLTGRQKSAEGVLAAQSVKARTVLHEQGKGSGE*
Ga0134040_12321962	3300012389	Grasslands Soil	MTAKPISIKGAGCKFGGCVRKAAELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGRGE*
Ga0126369_110903462	3300012971	Tropical Forest Soil	RCRTSGQLTAKSVSIKGTGCKFGGCALKADELTSGDLPLVPESGLRDEQSTLTGRQKSAKGEVAAQAAKARTVPARG*
Ga0181526_102503073	3300014200	Bog	MTAKPPSIKGAGCKSAGCVRKAVELTSGDLPFVSESGLRVERLILTGRQKSAAGKVGRELPKAQTVPRKGGKGSG
Ga0182010_100305312	3300014490	Fen	MSAKPISIKGTGCKSAGCVRKAVELTSGDLPFVPESGLGVEQLILTERQKSAAGKVGGELPKAQTVPRKGGKGSGE*
Ga0182014_104239881	3300014491	Bog	PISIKGTGCKSAGCVRKAVELTSGDLPFVPKSGLGVERSILIGRQRSAAGKVGRERPKAQTVLPKEGKGSGE*
Ga0182011_106583972	3300014496	Fen	PISIKGTGCKSAGCVRKAVELTSGDLPFVSESRLRVERSILTGRQKSAAGKVGRELPKAQTVLREEGKGSGE*
Ga0182024_103627662	3300014501	Permafrost	MTAKPISIKGTGCKFGGCVRKAVELTSGDLPLVRDAGLRIGQLILTGRQKSAEGVLGTKVLKARTVPARG*
Ga0182021_113435242	3300014502	Fen	MTARPISIKGTGCKSAGCVRKAVELTSGDLPFVSESRLRVERSILTGRQKSAAGKVGRELPKAQTVLREEGKGSGE*
Ga0167656_10174622	3300015076	Glacier Forefield Soil	MYKNRIRGIRCRTSGHVTAKSISIKGTGCKFGVPRGGPVRKAVELTSGDLPFVVESRLRVEQSILTGRQKSAEGVVVAKAMKARTVPARG*
Ga0187815_100352731	3300018001	Freshwater Sediment	MITKCLSIKSLDCKFGGCVQTAVELTSGDLPFAVDSRLRVERSVLIGRQKSAEGVLAASAVKARTVLRKQGKGSGSSQRNS
Ga0190274_136778402	3300018476	Soil	REVRIHQGTGCKTGGCVPKAVELTSGDLPFVPESGLRVEGSILIGRQKSAEGVVGRRVPKARTVPARG
Ga0187800_10502741	3300019278	Peatland	VTVKPISIKGAGCKFGGCVRKAVEITSGDLSFVRESGLRVERFILTGRQKSAAGVVVRQRMKAQTVLRKEGNGSGE
Ga0187893_100563832	3300019487	Microbial Mat On Rocks	MTTKSISIKGAGCKSGGCVPKAVELTSGDLPFAVESRLRIERSVLTGRQKSAKGVLAAQAVKARTVLREQGKGSGE
Ga0206356_100826452	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKSASIKGLERRFGGCVRKAVELTSGDLPFAVDSRLRVERSVLTGRQKSAEGVVTARAVKARTVLRKQGKGSGE
Ga0163150_101841592	3300020195	Freshwater Microbial Mat	PMTAKPISIKGTGCKFGGCVRKVVELTSGDLPFVSESRLRVERSILIGRQKSAEGVLVAKAMKARTVPARG
Ga0163152_101661002	3300020213	Freshwater Microbial Mat	MIAKPISIKGTGCKFGGCVRKVVELTSGDLPFVSESRLRVERSILIGRQKSAEGVLVAKAMKARTVPARG
Ga0213853_109318552	3300021861	Watersheds	MTTKSRSIKGIVCKFGGCVRKAVELTSGDLPFVPESGLRVERSTLIERQKSAEGIVVTGVTKARTVPEGDKESGE
Ga0242642_10712622	3300022504	Soil	MTAKPLSIKGTGCKFGGCVRKVVELTSGDLPFVLESRLRVEQLVLTGRQKSAEGVLGTEVLKARTVLRKQVNGRGK
Ga0242648_10697862	3300022506	Soil	MTAKPISIKGAGCKFGGCVRKAVELTSGDLSLVRDTGLGIERLILTGRQKSAEGVVGTEVLKARTVPARG
Ga0207926_11011361	3300025619	Arctic Peat Soil	PISIKGTGCKFGGCVRKVVELTSGDLPLVREPGLRIERSILTGRQKSAAGVVVRRRMKAQTVLRKEGNGSGE
Ga0207686_106386872	3300025934	Miscanthus Rhizosphere	MIAKPISIKGTGCKFGGCVRKAVELTSGDLPFVVESRLRIERLILTGRQKSAEGVVVTQVMKARTVPARG
Ga0209686_10370252	3300026315	Soil	MTAKPISIKGAGCKFGGCVRKATELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE
Ga0209160_10744452	3300026532	Soil	MTAKPISIKGAGCKFGGCVRKATELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGRGE
Ga0209577_101686201	3300026552	Soil	GCKFGGCVRKATELTSGDLPFVSESRLRGKRFLLTGRQKSAEGEVGRQLPKARTVLRQQVNGSGE
Ga0209421_10652272	3300027432	Forest Soil	MTAKPISIKGTGCKFGGCVRKVGELTSGDLPLVRNTGLRIERLVLTGRQKSAAGIVVRQRMKAQTVLRKEGNGSGE
Ga0209799_11180082	3300027654	Tropical Forest Soil	IRCRTSGQLTAKSVSIKGTGCKFGGCALKADELTSGDLPLVPESGLRDEQSTLTGRQKSAKGEVAAQAAKARTVPARG
Ga0209328_101958972	3300027727	Forest Soil	TKSIFIKHAGCKSGGCVRKAVEFTSGDLPFAVDSRLRIERSVLTGRQKSAEGVLGTQVLKARTVPARG
Ga0209166_100034003	3300027857	Surface Soil	MIAKPISIKGTERKFGGCAWKAVELTSGGLSLVVEIRLGVERLTLTGRQKSAAGIVVQQAGMKAQTVLRKESKGRGK
Ga0208980_101877672	3300027887	Wetland	LTAKPISIKGTGCKSGGCAPKAVELTSGDLLLVPESGLRRERFLLTGRQKSAEGVVVPKGMKARTVLRKEGNGSGK
Ga0209488_110097642	3300027903	Vadose Zone Soil	SGLMTAKSRSIKRTGCKFGGCVSKAVELTSGDLPFAVETRLRVERSVLTGWQKSAAGVVAAQVVKAQTVLRERGKGSGE
Ga0209415_1004052310	3300027905	Peatlands Soil	MSGQVTVKSISIKGTGCKFGGCVRKAVELTSGDLPFVSESRLRIERSVLTGRQKSAAGVVVAKAAKAQTVSARG
Ga0247275_10111424	3300029817	Soil	IKGAGCKSDGCVRKAVELTSGDLPFVPESGLRRERFLLTGRQKSAAGKVGRELPKAQTVLRKEGKGSGE
Ga0265324_100552211	3300029957	Rhizosphere	SIKGAGCKFGGCVRKAVELTSGDLPLVRDTGLRIERSVPTGRQKSAAGVVVRLRMKAQTVLRKEGNGSGE
Ga0302283_10578682	3300029994	Fen	RSIKGTGCKSGVCVPKAVELTSGGLPLVRNSGLRIGQPVLTGRQKSAEGVLGTKVLKARTVLARG
Ga0265746_10145002	3300030815	Soil	MTAKPISIKGTGCKFGGCVRKAVELTSGDLPLVRDAGLRIGQLILTGRQKSAEGVLGTKVLKARTVPARG
Ga0170824_1111651522	3300031231	Forest Soil	MTTKSIFIKRMGCKFGGCVRKAVELTSGDLPFAVDSRLRVERSVLTGRQKSAEGVLAAQAVKARTVLREAG
Ga0302325_104333821	3300031234	Palsa	MTTKSISIKGTGCKFGGCVRKAVELTSGDPSLVRDTGLRIGQPVLTGRQKSAEGVLGTKVLKARTVLRKQVDGSGK
Ga0302325_125526522	3300031234	Palsa	AKPISIKGTGCKSAGCVRKAVELTSGDLPFVPESGLRVEQSILTGRQKSAAGKAGGELPKAQTVLRKEGKGSGK
Ga0318516_102361892	3300031543	Soil	MITKSLSIKGMDCKSGGCVRKAVELTSGDLPFAVGSQLRVERSVLTGRQKSAEGVLAGEPVKARTVLRKQGKGSGE
Ga0310686_1024381401	3300031708	Soil	MTAKPISIKGTGCKSAGGVRKTVELTSGDLLLVSKAGLRVERSTPTGQQKSAAGKVGRELPKAQTVLRKEGKGSGE
Ga0265342_102764921	3300031712	Rhizosphere	MTAKPISIKGTGCKFGGCVRKAVELTSGDLPFVPKSGLRRERSVLTGRQKSAEGVVVTQVMKARTVPARG
Ga0302321_1035080772	3300031726	Fen	MTAKPISIKGTGCKFGGCVRKVGELTSGDLPLVRNTGLRIERLVLTGRQKSAAGVVVRQRMKAQTVLRKEGNGSGE
Ga0318501_103456691	3300031736	Soil	IKGMDCKSGGCVRKAVELTSGDLPFAVGSQLRVERSVLTGRQKSAEGVLAGEPVKARTVLRKQGKGSGE
Ga0318502_101528822	3300031747	Soil	MNKNRMRGIRGRTSWLVTTKSISIKGTGCRSGGRVRKAAELTSGDLPFVLESGLRVERSILTGRQKSAEGVLGTQVLKARTVPARG
Ga0307475_106025651	3300031754	Hardwood Forest Soil	MTVKPISIKGTGCKFGGCVRKAVEITSGDLPFVPESGLRVERSILTGRQKSAAGVVVRQRTKAQTVLRKEGNGSGE
Ga0318554_102220192	3300031765	Soil	IKGAGCKFGGGVRKAVELTSGDLSLVSETGLRVERSILTGRQKSAEGVVVPQGMKARTVLREAG
Ga0318529_104173112	3300031792	Soil	IRRRASWPVTAKPISIKGAGCKFGGCARKAVELTSGDLPLVSQSGLRVERSILTGRQRSAEGVVVPQGTKARTVLREAG
Ga0318503_102007422	3300031794	Soil	IKGTGCKSGGCVLKADELTSGDLPLVPESGLRDEQSALTGRQKSAEGEVVAEATKARTVPARG
Ga0318497_100784072	3300031805	Soil	SLSIKGMDCKSGGCVRKAVELTSGDLPFAVGSQLRVERSVLTGRQKSAEGVLAGEPVKARTVLRKQGKGSGE
Ga0318544_100719371	3300031880	Soil	IKGAGCKFGGGARKAVELTSGDLSLVSETGLRVERSILTGRQKSAEGVVVPQGMKARTVLREAG
Ga0306925_104292763	3300031890	Soil	MYKNRMRGMLCGTSGPMTAKSISIKGAECRSGVCVGKAVELTSGDLPLVPESGLRVERLILTGRQKSAEGVVIVQTVKARTVPARG
Ga0306926_103481612	3300031954	Soil	MYKNRMRGMLCGTSGPMTAKSISIKGAECRSGVCVRKAVELTSGDLPLVPESGLRVERLILTGRQKSAEGVVIVQTVKARTVPARG
Ga0307479_113304842	3300031962	Hardwood Forest Soil	MKSISIKGTGCKFGGCVRKVVELTSGDLPFVLESRLRVEQLVLTGRQKSAEGVVGVKTLKARTVPAKGLMGVASKQRNS
Ga0318562_105114641	3300032008	Soil	VSIKGTGCKSGGCALKADELTSGDLPLVPESGLRDEQSALTGRQKSAEGEVVAEATKARTVPARG
Ga0310911_107839642	3300032035	Soil	LSIKGMDCKSGGCVRKAVELTSGDLPFAVGSQLRVERSVLTGRQKSAEGVLAGEPVKARTVLRKQGKGSGE
Ga0318558_106745942	3300032044	Soil	GMDCKSGGCVRKAVELTSGDLPFAVGSQLRVERSVLTGRQKSAEGVLAGEPVKARTVLRKQGKGSGE
Ga0335079_102166153	3300032783	Soil	MYKNRIRGIRCRASELWIVKPLSIKGTGCKSGGDASKAVELTLGDLPFVAETRLRSKRLILTGRQKSAEDEVVRQRTKVQTVLRKEGKGKGE
Ga0335079_123597102	3300032783	Soil	KGAGCKSAGCVRKAVELTSGDLPFVSESGLRVERLILTGRQKSAAGKVGRELPKAQTVPRKGGKGSGE
Ga0335070_112138372	3300032829	Soil	VKPLSIKGAGCKSAGCARKAVELTSGDLPFVSESGLGVERSILTGRQKSAAGKVGGELPKAQTVLRKEGKGSGQ
Ga0335081_118378251	3300032892	Soil	SRLMTAKPLSIKGAGCKSAGCARKAVELTSGDLPFVPESGLGVERSILTGRQKSAAGKVGRELPKAQTVLRKEGKGSGE
Ga0335075_100979974	3300032896	Soil	MTTKSLSIKSLDCKFGGCVQKAVELTSGDLPFAVDSRLRVERSALTGRQKSAEGVLAAQAVKARTVLRKQGKGSGE
Ga0310914_108917021	3300033289	Soil	MLCGTSGPMTAKSISIKGAECRSGVCVGKAVELTSGDLPLVPESGLRVERLILTGRQKSAEGVVIVQTVKARTVPARG
Ga0326727_101966092	3300033405	Peat Soil	TGCKFGGGVRKAVELTSGDLPLVSESRLRVERSNLTGRQKSAEGKVGRELPKAPTVLRKEGKGSGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences