Metagenome / Metatranscriptome Family F097789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097789
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	110 residues
Representative Sequence	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGDGADRFTLSA
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	98.08 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.60% β-sheet: 21.90% Coil/Unstructured: 63.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00903	Glyoxalase	19.23
PF01070	FMN_dh	5.77
PF06078	DUF937	1.92
PF01370	Epimerase	1.92
PF03992	ABM	1.92
PF04185	Phosphoesterase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	5.77
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	5.77
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	1.92
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.23 %
Unclassified	root	N/A	2.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	94.23 %
Unclassified	root	N/A	2.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	91.35 %
Unclassified	root	N/A	2.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	71.15 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	16.35 %
Unclassified	root	N/A	2.88 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.96 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	71.15 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	16.35 %
Unclassified	root	N/A	2.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.96 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	71.15 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	16.35 %
Unclassified	root	N/A	2.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Glycomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces	0.96 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.96 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	71.15 %
Phytohabitans flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	15.38 %
Unclassified	root	N/A	2.88 %
unclassified Glycomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces	0.96 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	0.96 %
Kineococcus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	0.96 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	71.15 %
Phytohabitans flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	15.38 %
Unclassified	root	N/A	2.88 %
Glycomyces sp. TRM65418	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces → Glycomyces sp. TRM65418	0.96 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	0.96 %
Kineococcus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	0.96 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10091071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1262	Open in IMG/M
3300005345\|Ga0070692_10959536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300005434\|Ga0070709_10961657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300005435\|Ga0070714_100628422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1033	Open in IMG/M
3300005436\|Ga0070713_100353115	Not Available	1364	Open in IMG/M
3300005436\|Ga0070713_100702333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	966	Open in IMG/M
3300005436\|Ga0070713_102267159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	526	Open in IMG/M
3300005439\|Ga0070711_100672839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300005538\|Ga0070731_10536723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300005578\|Ga0068854_102272668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	502	Open in IMG/M
3300005591\|Ga0070761_10530760	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005602\|Ga0070762_10534823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	772	Open in IMG/M
3300005614\|Ga0068856_101113970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	807	Open in IMG/M
3300006028\|Ga0070717_11828952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	549	Open in IMG/M
3300006175\|Ga0070712_100939319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	747	Open in IMG/M
3300006176\|Ga0070765_102258266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	507	Open in IMG/M
3300006806\|Ga0079220_10322407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	967	Open in IMG/M
3300010043\|Ga0126380_11875336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	544	Open in IMG/M
3300010048\|Ga0126373_12246755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	606	Open in IMG/M
3300010048\|Ga0126373_12322552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	597	Open in IMG/M
3300010048\|Ga0126373_13266331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	505	Open in IMG/M
3300010361\|Ga0126378_11940276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670	Open in IMG/M
3300010373\|Ga0134128_11954040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	646	Open in IMG/M
3300010373\|Ga0134128_13171885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	505	Open in IMG/M
3300010876\|Ga0126361_10960780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	629	Open in IMG/M
3300010880\|Ga0126350_11534953	Not Available	566	Open in IMG/M
3300011120\|Ga0150983_12455413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	520	Open in IMG/M
3300011270\|Ga0137391_11042904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	664	Open in IMG/M
3300012359\|Ga0137385_11126969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	645	Open in IMG/M
3300012363\|Ga0137390_11679693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300012683\|Ga0137398_10507339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	830	Open in IMG/M
3300012944\|Ga0137410_10942528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	732	Open in IMG/M
3300012955\|Ga0164298_10664843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	725	Open in IMG/M
3300013104\|Ga0157370_11087666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	723	Open in IMG/M
3300014201\|Ga0181537_11013191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	562	Open in IMG/M
3300014325\|Ga0163163_12468911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	578	Open in IMG/M
3300014655\|Ga0181516_10463230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	649	Open in IMG/M
3300014657\|Ga0181522_10403693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	817	Open in IMG/M
3300020081\|Ga0206354_10726844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	502	Open in IMG/M
3300020140\|Ga0179590_1046173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1113	Open in IMG/M
3300020610\|Ga0154015_1025651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1081	Open in IMG/M
3300021170\|Ga0210400_10220583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1545	Open in IMG/M
3300021178\|Ga0210408_11336754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	542	Open in IMG/M
3300021402\|Ga0210385_11449284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	525	Open in IMG/M
3300021403\|Ga0210397_10548760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	879	Open in IMG/M
3300021404\|Ga0210389_10368156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1129	Open in IMG/M
3300021404\|Ga0210389_10865066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	704	Open in IMG/M
3300021404\|Ga0210389_10932234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	675	Open in IMG/M
3300021405\|Ga0210387_11296579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	630	Open in IMG/M
3300021407\|Ga0210383_10301280	Not Available	1379	Open in IMG/M
3300021420\|Ga0210394_10501666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1068	Open in IMG/M
3300021433\|Ga0210391_10997841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	652	Open in IMG/M
3300021474\|Ga0210390_11051709	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300021475\|Ga0210392_10896332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	663	Open in IMG/M
3300021479\|Ga0210410_11258357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300022467\|Ga0224712_10685714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300022533\|Ga0242662_10357148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	500	Open in IMG/M
3300025904\|Ga0207647_10304281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	907	Open in IMG/M
3300025904\|Ga0207647_10440659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	731	Open in IMG/M
3300025906\|Ga0207699_11420166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	513	Open in IMG/M
3300025909\|Ga0207705_10931987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	672	Open in IMG/M
3300025916\|Ga0207663_10762620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	769	Open in IMG/M
3300025916\|Ga0207663_11229020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	603	Open in IMG/M
3300025917\|Ga0207660_10243502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1417	Open in IMG/M
3300025928\|Ga0207700_10823865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	830	Open in IMG/M
3300025929\|Ga0207664_11137114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces → Glycomyces sp. TRM65418	697	Open in IMG/M
3300025949\|Ga0207667_10677363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1035	Open in IMG/M
3300027037\|Ga0209005_1010853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1053	Open in IMG/M
3300027528\|Ga0208985_1007509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2032	Open in IMG/M
3300027684\|Ga0209626_1166712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300027765\|Ga0209073_10278611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	657	Open in IMG/M
3300027817\|Ga0209112_10082571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1020	Open in IMG/M
3300027855\|Ga0209693_10437499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	630	Open in IMG/M
3300027889\|Ga0209380_10322980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	906	Open in IMG/M
3300027895\|Ga0209624_10337901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1003	Open in IMG/M
3300028536\|Ga0137415_11450803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300028877\|Ga0302235_10267162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	743	Open in IMG/M
3300028877\|Ga0302235_10299944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	695	Open in IMG/M
3300029943\|Ga0311340_11344251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	567	Open in IMG/M
3300029951\|Ga0311371_11558525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	731	Open in IMG/M
3300029999\|Ga0311339_10386038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1466	Open in IMG/M
3300030053\|Ga0302177_10516195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	616	Open in IMG/M
3300030490\|Ga0302184_10375777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	557	Open in IMG/M
3300030503\|Ga0311370_11362769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	753	Open in IMG/M
3300030524\|Ga0311357_10524353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1100	Open in IMG/M
3300030618\|Ga0311354_11124095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300030677\|Ga0302317_10342524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	665	Open in IMG/M
3300030738\|Ga0265462_12247461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300030738\|Ga0265462_12275623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300030739\|Ga0302311_10867904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	581	Open in IMG/M
3300031250\|Ga0265331_10441007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	585	Open in IMG/M
3300031250\|Ga0265331_10447661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	580	Open in IMG/M
3300031616\|Ga0307508_10332131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300031708\|Ga0310686_106501006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1156	Open in IMG/M
3300031711\|Ga0265314_10303813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	894	Open in IMG/M
3300031715\|Ga0307476_10437091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	968	Open in IMG/M
3300031754\|Ga0307475_10219428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1522	Open in IMG/M
3300031823\|Ga0307478_10412671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	1119	Open in IMG/M
3300032160\|Ga0311301_12661375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	552	Open in IMG/M
3300032896\|Ga0335075_11651656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	524	Open in IMG/M
3300032898\|Ga0335072_10039076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6505	Open in IMG/M
3300033134\|Ga0335073_10300435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1927	Open in IMG/M
3300033475\|Ga0310811_11021729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	719	Open in IMG/M
3300033547\|Ga0316212_1024742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.08%
Peat	Environmental → Terrestrial → Peat	11.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Roots	Host-Associated → Plants → Roots	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.23%
Loam	Environmental → Terrestrial → Soil → Loam	25.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100910712	3300001867	Forest Soil	MTDGEAVFQPGAEETRIPFRARGAYAGYRAFGSGDGAVLVEPQVARRLRSAAEFATQERRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRSDRISADGTD
Ga0070692_109595362	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQERRITGGLLYGRGWADEQGAYLVIDGYLEAGPGENRGDRLSADGADNFTLSAADLRLLREDAARMYSSFIEVGWWRTLA
Ga0070709_109616571	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTEDGTAFQPAADEVTVPFRSRGEYTGYRAFGSGDGAVLIAPSVARVLRSAAELATAAGRVAGGLLYGCGWADEMGTYLVIDH
Ga0070714_1006284221	3300005435	Agricultural Soil	MTDGGAAYQAGIEDAGDLFRPRGEYAGYRAFGSGDGAVLIDPRVTRALRSAAESATLERR
Ga0070713_1003531152	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGMTDGTAAFQPGADEVAVPFRPRDLYAGFRAFGSGNGAVLMAPPLAHNLRAAAKLATAERRIAWGLLYGCGWADELGTYLVIDHYLE
Ga0070713_1007023331	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSGMTDDGAAFQPGEQEVTFPFRPRATYAGYRAFGSGDGPVLLDPKIARKLRSAAEFATAERRIAGGLLYGRAWNDDQGAYLVIEGYLEAGPGENKDDRIRGDGTDDFTLSEADLRLLR
Ga0070713_1022671591	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAAFQPGAAEARIPFRARGAYAGYRAFGSGDGAVLVEPQVARRLRSAAEFANQERRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPG
Ga0070711_1006728391	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGEAVIQPGAEEVNVPFRPRGSYAGYRAFGSGDGAVLLEPAVARNLRSAAEFATQEERITGGLLYGRGWADDEGAYLVIDGYLEGGPGENRGDRISADGFDNFTLSEADLRLLRADGARMYSSFLEVGWWRTLPELGEFGPQDF
Ga0070731_105367232	3300005538	Surface Soil	MTEDGTAFQPAADEVTVPFRSRGAYTGYRAFGSGDGAVLIAPSVVRDLRSAAELATAERRIAGGLLYGHGWADEMGTYLVIDHYLEAGPGENRGDRISA
Ga0068854_1022726681	3300005578	Corn Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQERRITGGLLYGRGWADEQGAYLVIDGYLEAGPGENRGDRLSADGADNFTLSAADLRLLRED
Ga0070761_105307601	3300005591	Soil	MTDSGALFQPGADEAEASFRPRSAYAGYRAFGGGDGAVLVNPEVAHDLRRAAESATQERRITGGLLYGRGWADDQGDYLVVSGYLEAGPGENRGDRITRDGFDEFTLSQADLRLLREDAARMYSGALEAGWWRTL
Ga0070762_105348231	3300005602	Soil	MTDGVAAFQPGSGGAPAPVRPRSAYTGYEAFGDGDGAVLVDPQVARNLRRAAEAATQEGRIAGGLLYGRGFADEQGRYLVVNGYLEAGPGENRGDRISRDGTGRFTLSAPDLRLLRRDASRMYTASAEAGWWRS
Ga0068856_1011139701	3300005614	Corn Rhizosphere	MTDGGAGLQPGAEETRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRVAGGLLYGHGWED
Ga0070717_118289521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSDGEAVIQPGAEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWSDEQGAYLVIDGYLEAGPGENSGDRIYRDGADHFTLSAADLRLLREDAARMYSGSLEAGWWRTLA
Ga0070712_1009393192	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAAFQPGAGGAPTPLRPRSAYSGHEAFGAGDGAVLVEPRVTRSLRLAAEFAAQEKRITGGLLYGRWFADEHGAYLVINGYLEAGPGENRGDRISRSGHSD
Ga0070765_1022582661	3300006176	Soil	MTDGGAAFQPGTEEVRVPFRPRGSYAGYRAFGRGDGAVLVKPEVARELRTAAEFATQERRFTGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGHGADRFTLS
Ga0079220_103224072	3300006806	Agricultural Soil	MTDGGAGFQPGAEETRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLREDGARMYSDALESGWWRTLPALGEFGP
Ga0126380_118753361	3300010043	Tropical Forest Soil	MTDGEAAFQPGAEETRIPFRARGAYAGYRAFGSGDGAVLLEPQVARRLRSAAEFATQERRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENSDRIAADGTDEFTLSAADRRLLRED
Ga0126373_122467551	3300010048	Tropical Forest Soil	MTDGSTTEGGAAFQPDVGEKPAPFRPRSAYAGHEAFGGGEGAVLIEPHVARQLRLAAESATMEGRIAGGLLYGRRWTDDQGSYLVINGFLEAGPGENRGDQLLRARRDEFTLSAADLRLLRRDAGRMYTSSAEAGWWRSLPTAGEF
Ga0126373_123225521	3300010048	Tropical Forest Soil	MTDGSTTDAGAVLQPGAGGAPVPVRARSAYAGHEAFGEGDGAVLIEPRIARELRLAAESATLEGRIAGGLLYGRRFADEQGSYLIINGFLEAGPGENRGDRITRDGRDAFTLSAADLRLLRRDATRMY
Ga0126373_132663311	3300010048	Tropical Forest Soil	MTDGSALSGGAAFHPGAAGTPALIRPRSAYVGHEAFGDGDGAVLVESHVVRGLRLAAESATQEGRIAGGLLYGRRWADEQGTYLVVNGFLEDGPGENRGDRIHRDGHDEFSLSAADLRLLRKDAAR
Ga0126378_119402761	3300010361	Tropical Forest Soil	MTDGGAAFQPGAGGAPTPLRPRTAYSGHEAFGIGDGAVLVEPRVARNLRLAAEFATQEKRIAGGLLYGRWFADEHGAYLVINGYLEAGPGENRGDRISRSGHSDFTLTDPDLRLLRRDAR
Ga0134128_119540401	3300010373	Terrestrial Soil	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQERRITGGLLYGRGWADEEGAYLVIDGYLEGGPGENRGDRISADGF
Ga0134128_131718851	3300010373	Terrestrial Soil	MTDGGATFQPGAEETRIPFRARGAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRVAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLREDAA
Ga0126361_109607802	3300010876	Boreal Forest Soil	MTDGGAAFQPGTEDVRVPFRPRGSYAGYRAFGGGDGAVLVKPEVARELRSAAEFATQERRFAGGLLYGRGWADEQGAYLVIDGYLEAGPGENSGDRIYSDGSDRFTLSEAD
Ga0126350_115349532	3300010880	Boreal Forest Soil	MTEDGAPLQPEEIAVPFRPRGHYAGYKAFGSGDGAVLVEHGVGHELRSAAEFAAQEGRVAGGLLFGRGWVDDQGTYLVVSGFLEAGPGE
Ga0150983_124554131	3300011120	Forest Soil	MSEGGTPFQPGADEVTVPFRGRDTYAGYRAFGSGDGAVLVKPEVARDLRRGAEFATQEGRITGGLLYGRGWADDQGAYLVVNGYVEAGPGENRHDRFSRSGADDFTLSEADLRLLREDA
Ga0137391_110429041	3300011270	Vadose Zone Soil	MTDGGAAFQPGTEEVGVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGD
Ga0137385_111269692	3300012359	Vadose Zone Soil	MSGMTDDGAAVQPGVEEVTVPFRPRVTYVGYRAFGSGDGAVLVDPKVTRELRSAAELAAAERRIAGGLLYGRGWNDDQGAYLVIEGYLEAGPGENK
Ga0137390_116796932	3300012363	Vadose Zone Soil	MTDGGAAFQPGTEEFRIPFRPRGSYAGYRAFGSGDGAVLVKPEVTRELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGD
Ga0137398_105073392	3300012683	Vadose Zone Soil	MTDGGAAFQPGTEEVRVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISHGADRFTL
Ga0137410_109425281	3300012944	Vadose Zone Soil	MTDGGAAFQPGADEARIPFRPRGSYAGYRAFGSGDGAVLLEPGVTRELRSAAEFATQEGRITGGLLYGRGWADEQGAYLVIDGYLEAGPGENSDDRISGDGYDSFT
Ga0164298_106648432	3300012955	Soil	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQEGRITGGLLYGRGWADEQGAYLVIDGYLEGGPGENRGDQISADGFDNFTLSEADLRLLREDAARMYS
Ga0157370_110876662	3300013104	Corn Rhizosphere	MTDGGAGFQPGAEEMRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQEGRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLREDGARMYSD
Ga0181537_110131911	3300014201	Bog	MTDGGVAFQPGADEVTVPFRVRGDYVGYRAFGDGDGAVLVKPEVAHALRSAAESATQERRVAGGLLYGSGWVDDQGAYLVVNGYLEAGPG
Ga0163163_124689111	3300014325	Switchgrass Rhizosphere	MTDGGAGFQPGAEETRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRVAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRDDRIAADGT
Ga0181516_104632302	3300014655	Bog	MTEDGTAFQQAADEVTVPFRSRGAYTGYRAFGSGDGAVLIAPSVVHGLRSAAESATAERRIAGGLLYGRGWADD
Ga0181522_104036932	3300014657	Bog	MSESGTPFQPGADEVTVPFRGRDTYAGYRAFGSGDGAVLVKPNVARDLRRGAELATQEGRITGGLLYGRGWADDQGAYLVVNGYVEAG
Ga0206354_107268441	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQEGRITGGLLYGRGWADEQGAYLVIDGYLEGGPGENRGDQISADGFDNFTLSEADLRLLREDAARMYSAFIEVGWWRTLAALGEFGPQDFA
Ga0179590_10461731	3300020140	Vadose Zone Soil	MTYDGAAFQPGTEEARVPFRPRGTYAGYRAFGSGNGAVLIDPKVTRELRTAAEFATQERRITGGLLYGRGWADEQGVYLVISGYEESGPGENSDDQIASDGTD
Ga0154015_10256511	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQERRITGGLLYGRGWADEQGAYLVIDGYLEAGPGENRGDRLSADGADNFTLSAADLR
Ga0210400_102205831	3300021170	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGDGADRFTLSAADLRLLREDAARMYS
Ga0210408_113367542	3300021178	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFTGGLLYGHGWADD
Ga0210385_114492841	3300021402	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGGGADRFTLSAADLRLLREDAARMYSGSLE
Ga0210397_105487602	3300021403	Soil	MAEEEAPFLPGAEDSDEGIEISFRPRGHYAGYKAFGNGEGAVLLEPRVARELRNAAEFATQEGRVTGGLLYGRGYLDDQGAYLVINGFIEAGPGENSGDRLSSDGADAFTLSEADLRLLREDAARMYSASLELGWWRT
Ga0210389_103681561	3300021404	Soil	MTDGAAFQPGMEEARVPFRPRGTYAGYRAFGSGNGAVLIEPKVTRELRTAAEFATQEQRITGGLLYGRGWADEQGVYLVIDGYVEAGPGENRGDRISRDGYDSFTLSAADLRLLREDAARMYSGLVEAGW
Ga0210389_108650661	3300021404	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGENSGDRISGDGADRFTLSA
Ga0210389_109322342	3300021404	Soil	MTDGGAAFQPGTEEARVPFRPRGTYAGYRTFGSGNGAVLIPPEVTRELRTAAEFATQEQRITGGLLYGRGWADEQGVYLVIDGYLEAGPGENRVDRISR
Ga0210387_112965792	3300021405	Soil	MTDGGAAFQPGTEELGIPFRARATYAGYRVFGSGDGAVLLDPGVTRDLRNAAEFATQERRVTGGLLFGHVWADDEGRYLVIDGFVEAGPGESRGDRVASDGTDSFTLSDADLR
Ga0210383_103012802	3300021407	Soil	MTEDGTAFQPAADEVTVPFRSRGAYTGYRAFGSGDGAVLIAPSVVHALRSAAERATAERRIAGGLLYGRGWADELGAYL
Ga0210394_105016662	3300021420	Soil	MTDGGAVFQPGARRAPVPLRPRSVYAGLDAFGDGDGAVLVEPRVSRNLRLAAESATQEGRIAGGLLYGRGFVDEKGAYL
Ga0210391_109978412	3300021433	Soil	MSEGGTPFQPGADEVTVPFRGRDTYAGYRAFGSGDGAVLVKPEVARDLRRGAEFATQEGRITGGLLYGRGWADDQGAYLVVNGYVEAGPGENRHDRFSRSGADDFTLSEA
Ga0210390_110517091	3300021474	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLE
Ga0210392_108963321	3300021475	Soil	MTDGGAPFQPGTEEVAVPFRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRITGGLLYGRGFADEQGAYLVIDGYLEAGPGENSGDRLS
Ga0210410_112583571	3300021479	Soil	MSDGSAAFQPGADEVRALFRPRGTYAGHRAFGSGDGAVLVEPEVARKLRSAAEFATQERRVTGGLLYGRGWADEQGAYLVIDGYLESGPGENRGDRISD
Ga0224712_106857141	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAGFQPGAEEMRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQEGRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENSDRIAADGTDEFTLSAADLRLLREDAARMYSDALESGWWRTLPALGEFGPRDFE
Ga0242662_103571481	3300022533	Soil	MSDGGAVFHSGPGRAPVPLRPRSVYAGLDAFGDSDGAVLLETRVSRNLRLAAESATQEGRITGGLLYGRGFVDEKGAYLVVSGYLEAGPGENRGDRISRGGSDQFTLSEPDLRLLRRDATRMYTSSVEAGWWRSLPAPGEFGPRDRQTQRALVGPG
Ga0207647_103042811	3300025904	Corn Rhizosphere	MTDGGAGFQPGAEEMRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQEGRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENSDRIAADGTDEFTLSAADLRLLREDAV
Ga0207647_104406591	3300025904	Corn Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQERRITGGLLYGRGWADEQGAYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLRED
Ga0207699_114201661	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAVFQPGARRAPVPLRPRSVYAGLDAFGDGDGAVLLEARVSRNLRLAAESASQEGRITGGLLYGRGFVDEKGAYLVVSGYLEAGPGENRGDRISRGGSDEFTLSEPDLRLLRRDATRMYTSSVEAGWWRSLPAPGE
Ga0207705_109319871	3300025909	Corn Rhizosphere	MTDGGAGFQPGAEEMRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRVAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLREDAARMYSDALESGWWRTL
Ga0207663_107626202	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAAYQAGIEDAGDLFRPRGEYAGYRAFGSGDGAVLIDPRVTRALRSAAESATLERRITGGLLFGSGWADEQGDYLVITGYLEAGPGENRGDRIASDGTDRFTLSDADLRLLRED
Ga0207663_112290201	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAAFQPGAGGAPTPLRPRSAYSGHEAFGAGDGAVLVEPRVTRSLRLAAEFATQEKRITGGLLYGRWFADEHGAYLVINGYLEA
Ga0207660_102435022	3300025917	Corn Rhizosphere	MTDGGAGFQPGAEETRIPFRARGAYAGYRAFGSGNGAVLVEPQVTRRLRSAAEFATQEGRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENSDRIAADGTDEFTLSAADLRLLREDGARMYSDALESGWWRTL
Ga0207700_108238651	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGGAVFQPGARRAPVPLRPRSVYAGLDAFGDGDGAVLLEARVSRNLRLAAESASQEGRITGGLLYGRGFVDEKGAYLVVSGYLEAGPGENRGDRISRGGSDEFTLSEPDLRLLRRDATRMYTSSVEAGWWRSLPAPGEFGPRDRQTQRASTE
Ga0207664_111371141	3300025929	Agricultural Soil	MTDGGMTDGTAAFQPGADEVAVPFRPRDLYAGFRAFGSGNGAVLMAPPLAHNLRAAAKLATAERRIAWGLLYGCGWADELGTYLVIDHYLEAGAGESGD
Ga0207667_106773632	3300025949	Corn Rhizosphere	MTEGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEVARNLRTAAEFATQEQRIAGGLLYGRGWADEQ
Ga0209005_10108531	3300027037	Forest Soil	MTDGGAPFQPGTEEVAVPFRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRITGGLLYGRGFADEQGAY
Ga0208985_10075093	3300027528	Forest Soil	MTDGEAAIQPDADEVNVPFRPRGSYAGYRAFGSGDGAVLLEPEVARSLRTAAEFATQEGRIAGGLLYGRGWADEQGF
Ga0209626_11667122	3300027684	Forest Soil	MTDGGAAFQPGTEEVAVPFRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRITGGLLYGRGFADEQGAYLVIDGYLEAGPGENSGDRISGHGADRFTLSAADLRLLRE
Ga0209073_102786112	3300027765	Agricultural Soil	MTDGGAGFQPGAEETRIPFRARSAYAGYRAFGSGDGAVLVEPQVTRRLRSAAEFATQERRIAGGLLYGHGWEDEQGSYLVIDGYLEAGPGENRGDRIAADGTDEFTLSAADLRLLREDGARMYSDALESGWWRTLPALGEFGPQ
Ga0209112_100825712	3300027817	Forest Soil	MTDGGAPFQPGTEEVAVPFRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRITGGLLYGRGWADEQGVYLVIDGYLEAGP
Ga0209693_104374991	3300027855	Soil	MAEEEAPFLPGAEDSDEGIEISFRPRRQFAGYKAFGNGEGAVLLEPRVARELRNAAEFATQERRVTGGLLYGRGYLDDQGAYLVINGFIEAGPGENSGDRLSSDGADAFTLS
Ga0209380_103229802	3300027889	Soil	MTDGGAAFQPGTEEVSVPFRPRGSYAGYRAFGSGDGAVLVKPEVARELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGPGEN
Ga0209624_103379011	3300027895	Forest Soil	MTDGGAAFQPGTEDLNPPYRPRGSYAGYRAFGSGDGAVLVKPETARALRSAAEFATQERRIAGGLLFGRGWADEQGAYLVIDGYLEAGPGETSGDRISG
Ga0137415_114508032	3300028536	Vadose Zone Soil	MTDGGAAFQPGTEEVRVPFRPRGSYAGYRAFGSGDGAVLVKPEVTRELRTAAEFATQERRFAGGLLYGHGWADDQGAYLVIDGYLEAGP
Ga0302235_102671622	3300028877	Palsa	MTDDAGGFGPGQEELALAFRARAAYVGHRAFGSGDGAVLVDPAVAHELRNAAEFATQERRVTGGLLYGRGWADDQGAYLVVDGYLEAGPGENSGDRISASGLDDFTLSQADLRLLRD
Ga0302235_102999441	3300028877	Palsa	MTNGETVIQPGADEVTVPFRERSAYLGYKAFGGGDGAVLVAPKVARELRSAAEFATQERRITGGLLYGRGWADEQGAYVVVDRYLEAGPGENSGDRLVVDGPD
Ga0311340_113442511	3300029943	Palsa	MTDDAGGFGPGQEELALAFRARAAYVGHRAFGSGDGAVLVDPAVAHELRNAAEFATQERRVTGGLLYGRGWADDQGAYLVVDGYLEAGPGENSGDRISASGLDDFTL
Ga0311371_115585252	3300029951	Palsa	MTNGETVIQPGADEVTVPFRERSAYLGYKAFGGGDGAVLVAPKVARELRSAAEFATQERRITGGLLYGRGWADEQGAYVV
Ga0311339_103860381	3300029999	Palsa	MTDGGTAFQPGAEEVSVPFRPRSAYAGYRAFGDGDGAVLVEPKITHKLREAAENATAERRIAGGLLYGRGWADEQGAYLVIGGYLEAGPGENSGDRISSDGPDNFTL
Ga0302177_105161951	3300030053	Palsa	MTNGETVIQPGADEVTVPFRERSAYLGYKAFGGGDGAVLVAPKVARELRSAAEFATQERRITGGLLYGRGWADEQGAYVVVDRYLEAGPGENSGDRLVVDGPDDFTLSQADLRLLH
Ga0302184_103757771	3300030490	Palsa	MTDDAGGFGPGQEELALAFRARAAYVGHRAFGSGDGAVLVDPAVAHELRNAAEFATQERRVTGGLLYGRGWADDQGAYLVVDGYLEAGPGENSGDRISASGLDD
Ga0311370_113627691	3300030503	Palsa	MTNGETVIQPGADEVTVPFRERSAYLGYKAFGGGDGAVLVAPKVARELRSAAEFATQERRITGGLLYGRGWADEQ
Ga0311357_105243532	3300030524	Palsa	MTNGETVIQPGADEVTVPFRERSAYLGYKAFGGGDGAVLVAPKVARELRSAAEFATQERRITGGLLYGRGWADEQGAYVVVDRYLEAGPGENSGDRLVVDGPDDFTLSQADLRL
Ga0311354_111240951	3300030618	Palsa	MTDGGTAFQPGAEEVSVPFRPRSAYAGYRAFGDGDGAVLVEPKITHKLREAAENATAERRIAGGLLYGRGWADEQGAYLVIGGYLEAGPGENSGDRISSDGPDNFTLSEADLRLLREDAARMYSASLEVGWWR
Ga0302317_103425241	3300030677	Palsa	MTDGGTAFQPGAEEVSVPFRPRSAYAGYRAFGDGDGAVLVEPKITHKLREAAENATAERRIAGGLLYGRGWADEQGAYLVIGGYLEAGPGENSGDRISSDGPDNFTLSEADLRLLREDAARMYSASLEVG
Ga0265462_122474611	3300030738	Soil	MSEGGTPFQPGADEVTVPFRGRDTYAGYRAFGSGDGAVLVKPQVARDLRRGAELATQEGRITGGLLYGRGWADDQGAYLVVNGYVEAGPGENRHDRFSRADTDDFTLSEADLRLLREDASRMYTAELEVGWWRTLP
Ga0265462_122756231	3300030738	Soil	MTDGVSVFQPGARRAPMPLRPRSVYAGLDAFGHGDGAVLVETGVARNLRLAAESATQEGRIAGGLLYGRGFVDEKGAYLVVSGYLEAGPGENRGDRISRGGFDDFTLSGPDLRLLRRDAARTYTSSVEAGWWRSLPAAGEF
Ga0302311_108679041	3300030739	Palsa	MTDGGTAFQPGAEEISVPFRPRSAYAGYRAFGDGDGAVLVEPKITHKLREAAENATAERRIAGGLLYGRGWADEQGAYLVIGGYLEAGPGE
Ga0265331_104410071	3300031250	Rhizosphere	MTDDGTAFQPDADEMTVPFRSRGAYTGYRAFGSGDGAVLIAPSVVHDLRSAAESATAERRITGGLLYGRGWADDMGTYLVIDHYLE
Ga0265331_104476611	3300031250	Rhizosphere	MTDGGAVFQPGARRAPVPLRPRSVYAGLDAFGDGDGAVLVEPRVSRNLRLAAESATQEGRIAGGLLYGRGFVDEKGAYLVVSGYLEAGPGENRGDRISRGESDEFTLSEPDLRLLRRDAARMYTSSVEAGWWRSLPAPGAFGRRDLE
Ga0307508_103321311	3300031616	Ectomycorrhiza	MSGMTDDGAAFQPGVEEVTVPFRSRVTYAGHRAFGSGDGAVLIDREVFRKLRSAAEFAAQERRVAGGLLFGRGWADDQGAYLVIEDYLEAGPGENRDDRIREDGSDDFTLSEADLRLLREDA
Ga0310686_1065010061	3300031708	Soil	MTEGETVIQPGEEEVAVPFRERGAYLGYKAFGSGDGAVLVAPKVARKLRSAAEFATQERRITGGLLLGRGWADGQGAYLVVEGYLEAGPGENRRDRLVDGGPDDFTLSRADLRLLREDAARMYSALL
Ga0265314_103038132	3300031711	Rhizosphere	MTDGGAVFQPGARRAPVPLRPRSVYAGLDAFGDGDGAVLVEPRVSRNLRLAAESATQEGRIAGGLLYGRGFVDEKGAYLVV
Ga0307476_104370912	3300031715	Hardwood Forest Soil	MTDGGAAFQPGTEDLNPPYRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRIAGGLLFGRGWADEQGAYLVIDGYLEAGPGE
Ga0307475_102194281	3300031754	Hardwood Forest Soil	MSDGSAAFQPGADEVRALFRPRGTYAGHRAFGSGDGAVLVEPEVARKLRSAAEFATQERRVTGGLLYGRGWADEQGAYLVIDGYLESGPGENRGDRISDHGTDQFSLSEAGLRLLREDAARMYSTSLEVGWWRTLAGLGEFGPR
Ga0307478_104126711	3300031823	Hardwood Forest Soil	MTDGGAPFQPGTEEVAVPFRPRGSYAGYRAFGSGDGAVLVKPETARELRSAAEFATQERRITGGLLYGRGFADEQGAYLVID
Ga0311301_126613751	3300032160	Peatlands Soil	MTDEGAPFQPGTEQITVPLRPRGTYAGYKAFGGGDGAVLVKPEVARELRSAAEFATQERRVTGGLLFGRGWADGQGAYLVIDGFVEGGPGENSGDRLA
Ga0335075_116516561	3300032896	Soil	MTDGGAAFRPGAEGLNPPYRPRAEYAGYRAFGDDDGAVLVKPEVTRKLRTAAEFATQERRIAGGLLYGRGWADEAGTYLVVEHYIEAGPGDSGGRISGDG
Ga0335072_100390761	3300032898	Soil	MTDGGAVFQPGERESPVPIRPRGTFAGHEVFGHEDSVVLVEPEVQRDLRLAAEFASQEGRVTGGLLYGRRWADEQGVYLVVSGYVEAGPGENPDDRISRDSAGEFTLSPADLRLLRKDAARMYTASPEVGWWRSL
Ga0335073_103004351	3300033134	Soil	MTDGGAVFRPGAGRAPAPLRPRSVYAGLDAFGDGDGAVLVESRVVRNLRLAAEFAAQEGRITGGLLYGRSFVDEKGAYLVISGYLEAGPGENPGDQVSRDGYGEFTLSEPDLRLLRRDAARMYTSSVEAGWWRT
Ga0310811_110217292	3300033475	Soil	MTDGEAVIQPGAEEVSVPFRPRGSYAGYRAFGTGDGAVLLEPEIARNLRNAAEFATQEERITGGLLYGRGWADDEGAYLVIDGYLEGGPGENRGDRISADGFDSFTLSEADLRLLRADGARMYSSFLEV
Ga0316212_10247422	3300033547	Roots	MSEGGTPFQPGADEVTVPFRGRDTYAGYRAFGSGDGAVLVKPEVARDLRRGAELATQEGRITGGLLYGRGWADDQGAYLVVNGYVEAGPGENRHDRFSRADADDFTLSEADLRLLREDASRMYTAELEVGWWRTLPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences