Metagenome / Metatranscriptome Family F097697

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097697
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	54 residues
Representative Sequence	VMVVGVMPGADAVRAALELLLELALELELDEHAATPSAAAVMMAAACQRSR
Number of Associated Samples	95
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	82.69 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (17.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.10% β-sheet: 0.00% Coil/Unstructured: 51.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02653	BPD_transp_2	70.19
PF13458	Peripla_BP_6	6.73
PF08402	TOBE_2	0.96
PF11838	ERAP1_C	0.96
PF12399	BCA_ABC_TP_C	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.31 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.35 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.96 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.88 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.88 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.88 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10072311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2548	Open in IMG/M
3300004082\|Ga0062384_100424924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300005181\|Ga0066678_10340862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300005437\|Ga0070710_10052883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2286	Open in IMG/M
3300005445\|Ga0070708_100001174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20181	Open in IMG/M
3300005458\|Ga0070681_10895396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300005468\|Ga0070707_100804878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300005471\|Ga0070698_100550066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300005518\|Ga0070699_102205268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300005541\|Ga0070733_10749625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300006176\|Ga0070765_101343574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300006176\|Ga0070765_101508360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300006796\|Ga0066665_10801532	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300009038\|Ga0099829_10179148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1705	Open in IMG/M
3300009148\|Ga0105243_12559343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300009174\|Ga0105241_11833572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300009522\|Ga0116218_1518864	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009525\|Ga0116220_10377001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	632	Open in IMG/M
3300009672\|Ga0116215_1148646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040	Open in IMG/M
3300009683\|Ga0116224_10041202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2262	Open in IMG/M
3300009698\|Ga0116216_10374919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	864	Open in IMG/M
3300009698\|Ga0116216_10745781	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010162\|Ga0131853_11278957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300010361\|Ga0126378_10320390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1656	Open in IMG/M
3300010361\|Ga0126378_11090796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300010373\|Ga0134128_10826227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300010376\|Ga0126381_100090714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3873	Open in IMG/M
3300010376\|Ga0126381_100392779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1930	Open in IMG/M
3300010379\|Ga0136449_100517750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2065	Open in IMG/M
3300010379\|Ga0136449_103617828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300010379\|Ga0136449_104430361	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300010400\|Ga0134122_11309471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300010401\|Ga0134121_12685404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300010880\|Ga0126350_10601558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1164	Open in IMG/M
3300012200\|Ga0137382_11299036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300012205\|Ga0137362_11055862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300012206\|Ga0137380_10018232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6429	Open in IMG/M
3300012209\|Ga0137379_11554820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300012351\|Ga0137386_11200623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300012357\|Ga0137384_10661526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300012925\|Ga0137419_10474728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300012927\|Ga0137416_11297409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300014169\|Ga0181531_10173426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300015371\|Ga0132258_10899689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2235	Open in IMG/M
3300016445\|Ga0182038_10419033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1126	Open in IMG/M
3300017822\|Ga0187802_10077139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1239	Open in IMG/M
3300017822\|Ga0187802_10381065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300017823\|Ga0187818_10198765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300017926\|Ga0187807_1221310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300017932\|Ga0187814_10351615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300017975\|Ga0187782_10276725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300018001\|Ga0187815_10055334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1668	Open in IMG/M
3300018006\|Ga0187804_10361475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300018007\|Ga0187805_10592622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300018025\|Ga0187885_10208716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300018047\|Ga0187859_10135488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1302	Open in IMG/M
3300018058\|Ga0187766_10168875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1367	Open in IMG/M
3300018085\|Ga0187772_10433995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300018085\|Ga0187772_10742423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300020581\|Ga0210399_11133655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300020583\|Ga0210401_10164070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2073	Open in IMG/M
3300021401\|Ga0210393_10162847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1795	Open in IMG/M
3300021406\|Ga0210386_10064573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2933	Open in IMG/M
3300021406\|Ga0210386_10612524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300021477\|Ga0210398_10415033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1097	Open in IMG/M
3300021479\|Ga0210410_11616914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300022711\|Ga0242674_1058066	Not Available	546	Open in IMG/M
3300022715\|Ga0242678_1083280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300026041\|Ga0207639_10449483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1169	Open in IMG/M
3300026214\|Ga0209838_1039381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300026555\|Ga0179593_1143201	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300027172\|Ga0208098_1014088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300027297\|Ga0208241_1044884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300027821\|Ga0209811_10055599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1361	Open in IMG/M
3300028146\|Ga0247682_1018120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1230	Open in IMG/M
3300028789\|Ga0302232_10200573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300028875\|Ga0307289_10367230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300028877\|Ga0302235_10065599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1707	Open in IMG/M
3300030494\|Ga0310037_10352466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300030743\|Ga0265461_12371621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300031525\|Ga0302326_10462458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1939	Open in IMG/M
3300031544\|Ga0318534_10033351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2821	Open in IMG/M
3300031546\|Ga0318538_10039593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2255	Open in IMG/M
3300031572\|Ga0318515_10279353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300031640\|Ga0318555_10253693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031718\|Ga0307474_10914726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300031763\|Ga0318537_10249922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300031765\|Ga0318554_10645260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300031770\|Ga0318521_10717510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300031778\|Ga0318498_10490421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300031781\|Ga0318547_10520360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300031823\|Ga0307478_11058272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300031981\|Ga0318531_10163796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	998	Open in IMG/M
3300032010\|Ga0318569_10008164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3822	Open in IMG/M
3300032044\|Ga0318558_10070391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1590	Open in IMG/M
3300032059\|Ga0318533_11393169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300032060\|Ga0318505_10053678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1734	Open in IMG/M
3300032066\|Ga0318514_10216441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300032205\|Ga0307472_101526136	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300032261\|Ga0306920_100044184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6456	Open in IMG/M
3300034124\|Ga0370483_0129138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300034163\|Ga0370515_0241609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Aquatic	Environmental → Aquatic	11.54%
Plants	Host-Associated → Plants	3.85%
Arthropoda	Host-Associated → Arthropoda	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.81%
Freshwater	Environmental → Aquatic → Freshwater	11.54%
Peat	Environmental → Terrestrial → Peat	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.54%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100723114	3300001593	Forest Soil	ARRAVSGWWLPMRIWVGVIPGAEAVRAALELPEPEVEPEVPLELELDEHAATASAATVTMAAACQRRRRGLSMRC*
Ga0062384_1004249241	3300004082	Bog Forest Soil	PGADAVRAAFELLVPEAAGGELELDEQAATPSAATVMMAAACQ*
Ga0066678_103408622	3300005181	Soil	PVSGWWLPIRIWVGVMPGADAVSAELELLEPDPALEPELELEEQAATVNAATVMMAAACQRRR*
Ga0070710_100528834	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ADAVRAALELLLEPAPGLELEPEPEEQAATVNAATVMTAAACQRSR*
Ga0070708_1000011741	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ADAVSAALELPELLEPDPGLELELELEFDEQAATASAATVMMAAACQRSR*
Ga0070681_108953962	3300005458	Corn Rhizosphere	GADAVSAELELLEPDPGLELEPELDEQAATVNAATVMMAAACQRSR*
Ga0070707_1008048782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSGWWLPIRIWVGVMPGADAVSAELELLEPDPALEPEPELDEQAATVNAATVMMAAACQRSR*
Ga0070698_1005500661	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPGADAVSAELELPEPDPALEPEFELDEQAATVNAATVMMAAACQRSR*
Ga0070699_1022052682	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VGVMPGADAVSAALELPEPDPELEPELELEPDEQAATESAATVATAAACQRSR*
Ga0070733_107496252	3300005541	Surface Soil	PVSGWWLPMVIVVGVMPGADAVRAALELPLLLLPAELGVELELLLEHAATASALTVIRAAACQRSR*
Ga0070765_1013435742	3300006176	Soil	DAVRAALELVLEVALELELDEHAATPSAATVIMAAACQRSR*
Ga0070765_1015083602	3300006176	Soil	GAAGPVSGWWLPMRIWVGVIPGAEAVRAALELPEPEVDPEVPLELELDEHAATASAATVTMAAAPVTRQRRRRGLSMRC*
Ga0066665_108015321	3300006796	Soil	MVIWVGVMPGADAVSAALDDPDPWLEPELELPPEEQAATVNAATVMTAAACQRSR*
Ga0099829_101791481	3300009038	Vadose Zone Soil	PMVICVGVMPGADAVKAELELLELLELEPEPELELELDEQAATARAATVMMAAACQRSR*
Ga0105243_125593432	3300009148	Miscanthus Rhizosphere	MPGADAVSAALELPEPDPELEPELELEPDEQAATESAATVATAAACQRSR*
Ga0105241_118335722	3300009174	Corn Rhizosphere	MPGADAVSAALELPEPDPELEPELELEPDEQAATASAATVATAAACQRSR*
Ga0116218_15188642	3300009522	Peatlands Soil	MRIWVGVMPGADAVRAELELLELELEPVVELELDEQAATARAATVMMAAACQRSR*
Ga0116220_103770013	3300009525	Peatlands Soil	MVIVVGVMPGADAVRAAFELLEPELLEPEPGLELELELDEQAAIVNVATVIMAAAC
Ga0116215_11486461	3300009672	Peatlands Soil	MRIWVGVMPGADAVRAELELLELEPELELELELDEQPATARAATVMMAAACQRSR*
Ga0116224_100412023	3300009683	Peatlands Soil	MVMVVAVMPGADAVRAALELVLELALELELDEHAATPSAAAVIRAAACQRSR*
Ga0116216_103749192	3300009698	Peatlands Soil	GPVSGWWLPMRIWVAVMPGAEAVRAALELLEPELLEPVPGLELELELDEQAATVSAATVMMAAACQRSRGVLRFM*
Ga0116216_107457812	3300009698	Peatlands Soil	VSGWWLPMVIVVGVIPGADAVKAELELLELEPELALELELDEQAATASAATVMMAAACQRSR*
Ga0131853_112789572	3300010162	Termite Gut	VMPGADAVRAAFVFEVAVELGLEVELDEHAATASALAAIRAVACQRRR*
Ga0126378_103203903	3300010361	Tropical Forest Soil	AGPVSGWWLPTVIVVAVMPGADAVSAAPELLEPDPGPELEVELDEQAATASAAAVMMAAACQRRR*
Ga0126378_110907961	3300010361	Tropical Forest Soil	GATGPVSGWWLPMVMVVAVMPGADAVSAVFELLLELELELELDEHAATPSAAAVMMAAACQRSR*
Ga0134128_108262271	3300010373	Terrestrial Soil	GAAGPVSGWWLPMVIVVAVMPGADAVSAALDEPDPGLELELPPEEQAATVNAAAVMTAAACQRRR*
Ga0126381_1000907145	3300010376	Tropical Forest Soil	WWLPMVMVVEVMPGADAVSAALELAAELADELELDEHAATPSAATVMMAAACQRSR*
Ga0126381_1003927791	3300010376	Tropical Forest Soil	MVIVVAVMPGADAVSAAPELLEPDPGLELEVELDEQAATASAAAVMMAAACQRRR*
Ga0136449_1005177503	3300010379	Peatlands Soil	MVIVVGVMPGADAVRAALELLELEPELELELELDEQAATARAATVMMAAACQRSR*
Ga0136449_1036178282	3300010379	Peatlands Soil	GVMPGADAVRAELELLELELEPVVELELDEQAATARAATVMMAAACQRSR*
Ga0136449_1044303612	3300010379	Peatlands Soil	MRIWVGVMPGADAVRAELELLELELEPELGLELELDEQAATARAATVIMAAACQRSR*
Ga0134122_113094711	3300010400	Terrestrial Soil	GAAGPVSGWWLPMVIWVAVMPGAEAVSAALELPEPDPEPEPELELEPDEQAATESAATVATAAACQRSR*
Ga0134121_126854042	3300010401	Terrestrial Soil	MPGAEAVSAELELLEPDPALELEPELDEQAATVNAATVMMAAACQRSR*
Ga0126350_106015582	3300010880	Boreal Forest Soil	GVMPGADAVRAALELPPELELELELELDEHAATPSSAEVMMAAACQRSR*
Ga0137382_112990362	3300012200	Vadose Zone Soil	VGVMPGADAVSAEFELPDPDPVLELEPEPEEQAATVNAATVTTAAACQRSR*
Ga0137362_110558622	3300012205	Vadose Zone Soil	GADAVSAELELLEPDPALELELELDEQAATVNAATVATAAACQRSR*
Ga0137380_100182321	3300012206	Vadose Zone Soil	PVSGWWLPMVIWVGVMPGADAVSAALELLEPDPGLELELEPDEQAAMVNAATVMMAAACQRSR*
Ga0137379_115548201	3300012209	Vadose Zone Soil	VSGWWLPIRIWVGVMPGADAVSAELELLEPDPALEPELELEEQAATVNAATVMMAAACQRRR*
Ga0137386_112006232	3300012351	Vadose Zone Soil	MPGADAGSAELELLEPDPALEPELELEEQAATVNAATVMMAAACQRRR*
Ga0137384_106615262	3300012357	Vadose Zone Soil	MVIWVGVMPGADAVSAALELLEPDPGLELELEPDEQAAMVNAATVMMAAACQRSR*
Ga0137419_104747282	3300012925	Vadose Zone Soil	VSREIARSMGGELELLEPDPALELELELDEQAATVNAATVATAAACQRSR*
Ga0137416_112974092	3300012927	Vadose Zone Soil	VMPGADAVSAELELLEPDPALELEPELDEQAATVNAATVMMAAACQRSR*
Ga0181531_101734261	3300014169	Bog	MRIWVGVIPGADAVRAALELPEPEVELELPLELELDEHAATPSAATVTIAAACQRRRRGLARRC*
Ga0132258_108996893	3300015371	Arabidopsis Rhizosphere	MVIVVGVMPGADAVSAALELLEPDPGLELEVELDEQAATVNAATVMTAAACQRRR*
Ga0182038_104190332	3300016445	Soil	GWWLPMVMVVGVMPGADAVRAAFELLLEVALELELDEHAATPSAAAVMMAAACQRSR
Ga0187802_100771392	3300017822	Freshwater Sediment	AGPVSGWWLPIVMVVGVMPGADAVRAAFELLLELALELGLEVDEHAATPSAAAVMMAAACQRSR
Ga0187802_103810652	3300017822	Freshwater Sediment	AVMPGADAVRAAFELLFEPVLELELELELDEHAATPSRAEVMMAAACQRSR
Ga0187818_101987651	3300017823	Freshwater Sediment	VSGWWLPIVMVVGVMPGAEAVRAALELLLELELELELELDEHAATPSAATVMMATACQRS
Ga0187807_12213102	3300017926	Freshwater Sediment	VSGWWLPMVMVVAVMPGADAVRAAFELGVEVVLELELDEHAVTASAAAAIRAVACQRSR
Ga0187814_103516152	3300017932	Freshwater Sediment	AALELPEPELLEPAPGLELELELDEQAATVSAATVMMAAACQRSRGVLRFM
Ga0187782_102767252	3300017975	Tropical Peatland	PGADAVSAALELLVELVLELELDEHAATASAATVARAMACQRSR
Ga0187815_100553341	3300018001	Freshwater Sediment	VMPGADAVRAALELPLLLLPPELGVELELLLEHAATASALTVIRAAACQRSR
Ga0187804_103614752	3300018006	Freshwater Sediment	GWWLPMVMVVAVMPGADAVRAAFELGVEVVLELELDEHAVTASAAAAIRAVACQRSR
Ga0187805_105926221	3300018007	Freshwater Sediment	VSGWWLPIVIVVGVMPGAEAVRAALELLLELALELELELDEHAATPSAATVMMATACQRS
Ga0187885_102087161	3300018025	Peatland	SGWWLPMRIWVGVMPGADAVRAELELPEPEVELELGLELDEHAATASAATVTMAAACQRRRRALLMRC
Ga0187859_101354882	3300018047	Peatland	GVMPGADAVRAELELPEPEVELELGLELDEHAATASAATVTMAAACQRRRRDLAMRC
Ga0187766_101688751	3300018058	Tropical Peatland	AVRAALELLVEVVLEVELDEQAATASAATVMMAAACQRSR
Ga0187772_104339951	3300018085	Tropical Peatland	MVVEVMPGADAVSAALELLVELALELELDEHAATASSATVARAVACQRSR
Ga0187772_107424231	3300018085	Tropical Peatland	MVIVVAVMPGADAVSAALELLEPDAAPELVVELDEQAATASAATVMMAAACQRRR
Ga0210399_111336552	3300020581	Soil	DAVRAALELLLELALELELDEHAATPSAATVMMAAACQRSR
Ga0210401_101640703	3300020583	Soil	VVGVMPGADAVRAAFELLLVLELELELPLDEHAATPSSAEVMMAAACQRSR
Ga0210393_101628473	3300021401	Soil	ADAVRAAFELLLVLELELELPLDEHAATPSSAEVMMAAACQRSR
Ga0210386_100645734	3300021406	Soil	RAALELLVEPEVEVEVELELELDEHAATPSSAEVMMAAACQRSR
Ga0210386_106125241	3300021406	Soil	PGADAVRAALELVPALELELELEFDEHAATPSRAEVMMAAACQRSR
Ga0210398_104150332	3300021477	Soil	GWWLPMVIVVGVMPGADAVRAELELLELEPELGLELELELDEQAATASAATVMMAAACQRSR
Ga0210410_116169142	3300021479	Soil	DAVRAALELLLEPAPGLELEPEPEEQAATVNAATVMTAAACQRSR
Ga0242674_10580663	3300022711	Soil	GWWLPIVIVVGVMPGADAVRAAFELLLELELELELELDEHAATPSSAEVMMAAACQRSR
Ga0242678_10832802	3300022715	Soil	WWLPIVIVVGVMPGADAVRAAFELLLVLELELELPLDEHAATPSSAEVMMAAACQRSR
Ga0207639_104494831	3300026041	Corn Rhizosphere	GADADSAAVELPEPDPEPEPELELEPDEQAATESAATVATAAACQRSR
Ga0209838_10393811	3300026214	Soil	AGPVSGWWLPMVIVVAVIPGADAVRAALELPELDPEAALELELDEHAARASAATVMMAAACQRTL
Ga0179593_11432014	3300026555	Vadose Zone Soil	MVIWVGVMPGADAVSAALELLDPDPGLELEPEPDEQAATVNAATVATAATCQRRR
Ga0208098_10140882	3300027172	Forest Soil	AAGPVSGWWLPIVIVVGVMPGADAVRAAFELLLVLELELELPLDEHAATPSSAEVMMAAACQRSR
Ga0208241_10448842	3300027297	Forest Soil	LPMVIVVGVMPGADAVRAELELLELEPELGLELELELDEQAATASAATVMMAAACQRSR
Ga0209811_100555992	3300027821	Surface Soil	GADAVSAELELLEPDPALELEPEPEPDEQAATVKAATVMMAAACQRSR
Ga0247682_10181202	3300028146	Soil	AVSAALELPEPDPELEPELELEPDEQAATESAATVATAAACQRSR
Ga0302232_102005732	3300028789	Palsa	WLPMVIVVAVIPGADAVRAALELPELDPEPALELELDEHAARASAATVMMAAACQRTR
Ga0307289_103672301	3300028875	Soil	GAEAVSAAFELLDPDPELGLELEPDEQAATENVATVTTAAACQRSR
Ga0302235_100655993	3300028877	Palsa	VIVVGVMPGADAVRAAPELPELDPEAALELEPDEHAARANAATVMMAAACQRTR
Ga0310037_103524661	3300030494	Peatlands Soil	GADAVRAELELLELELEPVVELELDEQAATARAATVMMAAACQRSR
Ga0311370_122954672	3300030503	Palsa	AELELPEPEVELEVPLELELDEHAATASAATVTMAAACQRRRRGLSMRC
Ga0265461_123716213	3300030743	Soil	VGVMPGADAVRAALELPAELELELELELDEHAATPSRAEVMMATACQRIR
Ga0302326_104624581	3300031525	Palsa	WLPMRIWVGVIPGAEAVRAALELPEPEVPPELELELDEHAATASAATVTMAAACQRRRRGLPMRC
Ga0318534_100333515	3300031544	Soil	MVMVVVVTPGADAVRAALELALEVGLELGLELDDHAATPSAAAVMMAA
Ga0318538_100395934	3300031546	Soil	TVIVVAVMPGADAVSAALELVEPDPGLELEVELDEQAATASAATVMMAAACQRRR
Ga0318515_102793532	3300031572	Soil	DAVSAALELVEPDPGLELEVELDEQAATASAATVMMAAACQRRR
Ga0318555_102536932	3300031640	Soil	VTPGADAVRAALELALEVGLELGLELDEHAATPSAAAVLMAAACQRSR
Ga0307474_109147262	3300031718	Hardwood Forest Soil	LPMVMVVGVMPGADAVRAALELPPVLELELELELDEHAATPSRAEVMMAAACQRSR
Ga0318537_102499222	3300031763	Soil	PVSGWWLPMVMVVVVTPGADAVRAALELALEVGLELGLELDEHAATPSAAAVMMAAACQRSR
Ga0318554_106452601	3300031765	Soil	VMPGADAVSAARELVEPDPGLELEVELDEQAATASAATVMMAAACQRRR
Ga0318521_107175101	3300031770	Soil	IVVAVMPGADAVSAAPELLEPDPGLELEVELDEQAATASAAAVMMAAACQRRR
Ga0318498_104904212	3300031778	Soil	MVMVVGVMPGADAVRAALELLLELALELELDEHAATPSAAAVMMAAACQRSR
Ga0318547_105203601	3300031781	Soil	IVVAVMPGADAVSAAPELLEPGIGLELEVELDEQAATASAAAVMMAAACQRRR
Ga0307478_110582722	3300031823	Hardwood Forest Soil	VSGWWLPMVMVVEVMPGADAVRAALELLPALVLVLVLELELDEHAAAPSAAAVMMAAACQRSR
Ga0318531_101637961	3300031981	Soil	VTPGADAVRAALELALEVGLELGLELDEHAATPSAAAVMMAAACQRSR
Ga0318569_100081641	3300032010	Soil	VMPGADAVSAALELVEPDPGLELEVELDEQAATASAATVMMAAACQRRR
Ga0318558_100703913	3300032044	Soil	VMVVGVMPGADAVRAALELLLELALELELDEHAATPSAAAVMMAAACQRSR
Ga0318533_113931691	3300032059	Soil	PGADAVRAALELLLELALELELDEHAATPSAAAVMMAAACQRSR
Ga0318505_100536783	3300032060	Soil	VRAALELALEVGLELGLELDEHAATPSAAAVMMAAACQRSR
Ga0318514_102164411	3300032066	Soil	GWWLPMVMVVGVMPGADAVRAALELLLELALELELDEHAATPSAAAVMMAAACQRSR
Ga0307472_1015261362	3300032205	Hardwood Forest Soil	MPGADAVSAELELLEPYPAHEPEPEPELEEQAATVNAATVMMAAACQRRR
Ga0306920_1000441847	3300032261	Soil	PMVIVVAVMPGADAVSAAPELLEPDPGLELEVELDEQAATASAAAVMMAAACQRRR
Ga0335075_115030182	3300032896	Soil	AVRGEVVLVAELELELELEEQAATPSAATVTMAVACQRSR
Ga0370483_0129138_675_842	3300034124	Untreated Peat Soil	AVIPGADAVRAALELPELEAELELELDEHAAAASAATVTMAAACQRRRRALFMRC
Ga0370515_0241609_84_266	3300034163	Untreated Peat Soil	MRIWVAVIPGADAVRAALELPELEAELELELDEHAAAASAATVTMAAACQRRRRALFMRC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097697

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences