Metagenome Family F097685

Basic Information
Family ID	F097685
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	61 residues
Representative Sequence	MEERRGRSRTPLRLILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.423 % of family members)
Environment Ontology (ENVO)	Unclassified (35.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.692 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0062593_1017945151 2Ga0063356_1006427163 3Ga0066680_100653333 4Ga0066673_106902272 5Ga0066673_108463711 6Ga0066676_104954751 7Ga0070676_102716442 8Ga0070690_1002783522 9Ga0070690_1009598211 10Ga0068869_1006971132 11Ga0070680_1011188761 12Ga0070660_1009045042 13Ga0070667_1008644152 14Ga0070705_1014246821 15Ga0070700_1002216151 16Ga0070700_1009250901 17Ga0070708_1014847551 18Ga0066689_102912062 19Ga0070662_1002722423 20Ga0070707_1019524192 21Ga0070699_1004678982 22Ga0066704_100057401 23Ga0070664_1021897701 24Ga0066705_100225602 25Ga0068854_1003271103 26Ga0068861_1003236041 27Ga0066903_1059864442 28Ga0068858_1017466651 29Ga0068860_1026366302 30Ga0075417_104055892 31Ga0075362_100055127 32Ga0075370_104045262 33Ga0068871_1002336651 34Ga0075421_1001316822 35Ga0075421_1015857141 36Ga0075425_1027187802 37Ga0079215_108167231 38Ga0075424_1003002362 39Ga0075424_1006991411 40Ga0079216_102361862 41Ga0079216_110549222 42Ga0075419_100857252 43Ga0099829_103146013 44Ga0099827_103662072 45Ga0075418_108967342 46Ga0066709_1006536281 47Ga0099792_110593602 48Ga0134127_108534132 49Ga0134122_124418581 50Ga0134121_103387661 51Ga0134123_117852043 52Ga0137391_113428792 53Ga0137388_105727082 54Ga0137365_102200452 55Ga0137363_107218642 56Ga0137374_104996392 57Ga0150985_1224078001 58Ga0137366_107583282 59Ga0157293_101657561 60Ga0157308_100441853 61Ga0157306_102445862 62Ga0157310_105426552 63Ga0137410_103320862 64Ga0164299_112381891 65Ga0163162_104876662 66Ga0120098_10648242 67Ga0137409_106220972 68Ga0184620_102948562 69Ga0184637_102783931 70Ga0190270_122930531 71Ga0193744_10466002 72Ga0193716_11503582 73Ga0210382_101572622 74Ga0224452_11781372 75Ga0207697_105612662 76Ga0207680_111290531 77Ga0207684_101595542 78Ga0207660_110037191 79Ga0207689_102387892 80Ga0207640_101790413 81Ga0207675_1007137831 82Ga0209240_10198061 83Ga0209131_14020872 84Ga0209802_10262483 85Ga0209161_100886241 86Ga0209180_101723783 87Ga0209814_103211322 88Ga0209590_105543521 89Ga0209590_107961232 90Ga0209590_108885571 91Ga0209382_107089313 92Ga0268265_117028262 93Ga0268264_101624551 94Ga0307282_105031232 95Ga0307304_103050292 96Ga0307497_102848921 97Ga0310887_101671541 98Ga0307468_1003451762 99Ga0310891_100150373 100Ga0307471_1010682212 101Ga0307472_1015411542 102Ga0310810_110347781 103Ga0247829_116000542 104Ga0364943_0357331_2_184
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0062593_1017945151 2Ga0066673_106902272 3Ga0070705_1014246821 4Ga0070707_1019524192 5Ga0066903_1059864442 6Ga0079215_108167231 7Ga0066709_1006536281 8Ga0134127_108534132 9Ga0150985_1224078001 10Ga0157310_105426552 11Ga0120098_10648242 12Ga0184637_102783931 13Ga0190270_122930531 14Ga0364943_0357331_2_184
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1Ga0062593_1017945151 2Ga0066673_106902272 3Ga0070705_1014246821 4Ga0070707_1019524192 5Ga0066903_1059864442 6Ga0079215_108167231 7Ga0066709_1006536281 8Ga0134127_108534132 9Ga0150985_1224078001 10Ga0157310_105426552 11Ga0120098_10648242 12Ga0184637_102783931 13Ga0190270_122930531 14Ga0364943_0357331_2_184
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.38% β-sheet: 0.00% Coil/Unstructured: 24.62%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13478	XdhC_C	25.96
PF02625	XdhC_CoxI	19.23
PF10604	Polyketide_cyc2	6.73
PF12804	NTP_transf_3	1.92
PF04945	YHS	1.92
PF08309	LVIVD	1.92
PF02502	LacAB_rpiB	0.96
PF13847	Methyltransf_31	0.96
PF13278	Obsolete Pfam Family	0.96
PF02133	Transp_cyt_pur	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	19.23
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	1.92
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.27%
Host-Associated	Host-Associated	31.73%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.85%
Plants	Host-Associated → Plants	31.73%
Terrestrial	Environmental → Terrestrial	64.42%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.96%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Roots	Host-Associated → Plants → Roots	2.88%
Sediment	Environmental → Aquatic → Sediment	2.88%
Soil	Environmental → Terrestrial → Soil	63.46%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.50%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.96%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.42%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 96 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1017945151	3300004114	Soil	MEERRSRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIR
Ga0063356_1006427163	3300004463	Arabidopsis Thaliana Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTG*
Ga0066680_100653333	3300005174	Soil	MIEERRSRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT*
Ga0066673_106902272	3300005175	Soil	TSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTER*
Ga0066673_108463711	3300005175	Soil	MEERRRRSRTPLRLILTAILVTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTEG*
Ga0066676_104954751	3300005186	Soil	TSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070676_102716442	3300005328	Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070690_1002783522	3300005330	Switchgrass Rhizosphere	MEERRGRSRTPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070690_1009598211	3300005330	Switchgrass Rhizosphere	LTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0068869_1006971132	3300005334	Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0070680_1011188761	3300005336	Corn Rhizosphere	RSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070660_1009045042	3300005339	Corn Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0070667_1008644152	3300005367	Switchgrass Rhizosphere	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070705_1014246821	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDERRSRSRLPLRLILTAIIITVALWLGELYMAPTWDKIRAFLLGYFLGSFTMEWIRTRASRETTVERS*
Ga0070700_1002216151	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0070700_1009250901	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQ
Ga0070708_1014847551	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVEEERRRRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT*
Ga0066689_102912062	3300005447	Soil	TAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0070662_1002722423	3300005457	Corn Rhizosphere	PLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0070707_1019524192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEERRGRSRLPLKLILFAILATSALWLAELYTHPTWDKIRSLLLGYFLGTFIMEWIRQRADRGELGAATSQP
Ga0070699_1004678982	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0066704_100057401	3300005557	Soil	ERRSRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT*
Ga0070664_1021897701	3300005564	Corn Rhizosphere	MEERRGRSRTPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0066705_100225602	3300005569	Soil	MVEERRRRSRTPLRLILTAILITSALWLGELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTSD*
Ga0068854_1003271103	3300005578	Corn Rhizosphere	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRS
Ga0068861_1003236041	3300005719	Switchgrass Rhizosphere	AILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0066903_1059864442	3300005764	Tropical Forest Soil	MEERRRRSRTPLRLVLTAILITSALWLAELYMQPTWTKIRSFVLGYFLGTFTMEWIRQRSDRMPEEEESERMTT*
Ga0068858_1017466651	3300005842	Switchgrass Rhizosphere	SDFMEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0068860_1026366302	3300005843	Switchgrass Rhizosphere	LRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0075417_104055892	3300006049	Populus Rhizosphere	MEERRSRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0075362_100055127	3300006177	Populus Endosphere	ALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0075370_104045262	3300006353	Populus Endosphere	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQ
Ga0068871_1002336651	3300006358	Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQ
Ga0075421_1001316822	3300006845	Populus Rhizosphere	MEERRGRSRLPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERTTE*
Ga0075421_1015857141	3300006845	Populus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMT
Ga0075425_1027187802	3300006854	Populus Rhizosphere	MEERRGRSRTPLRIILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0079215_108167231	3300006894	Agricultural Soil	MEDERRSRSRWPLRIILTVIFVVSALWLGELYMQPTWSKIRSFILGYFLGPFVMEWVHQRASRETVEEVVVKAP*
Ga0075424_1003002362	3300006904	Populus Rhizosphere	MEERRGRSRTPLRIILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0075424_1006991411	3300006904	Populus Rhizosphere	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIR
Ga0079216_102361862	3300006918	Agricultural Soil	MDDDRRSRSRAPLRIILTVIFVVTALWLAELYMDPTWQKIRSFILGYFLGTFVMEWVHQRASREVDATP*
Ga0079216_110549222	3300006918	Agricultural Soil	MEERRGRSRLPLRLILTAILITSALWLGELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERTTT*
Ga0075419_100857252	3300006969	Populus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0099829_103146013	3300009038	Vadose Zone Soil	MVEERRSRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0099827_103662072	3300009090	Vadose Zone Soil	MVEERRARSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0075418_108967342	3300009100	Populus Rhizosphere	LTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0066709_1006536281	3300009137	Grasslands Soil	ELAYPGGMEERRSRSRVPLKLILTAILITTALWLGELYMQPTWTKIRSFLLGYFLGSFTMEWIRQRSERMTDT*
Ga0099792_110593602	3300009143	Vadose Zone Soil	MEERRGRSRTPLRIILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0134127_108534132	3300010399	Terrestrial Soil	METAIDERRARSRAPLKIILTAILLASALWVMELYMAPTWPKIRSFVLGYFLGSFVMTWIHQRASRSTP*
Ga0134122_124418581	3300010400	Terrestrial Soil	MEERRSRSRTPLRLILTAILITSALWLTELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMT*
Ga0134121_103387661	3300010401	Terrestrial Soil	MEERRGRSRTPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWI
Ga0134123_117852043	3300010403	Terrestrial Soil	MEERRGRSRTPLRLILTAILITSALWLTELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0137391_113428792	3300011270	Vadose Zone Soil	MVEERRARSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMST*
Ga0137388_105727082	3300012189	Vadose Zone Soil	MVEERRSRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0137365_102200452	3300012201	Vadose Zone Soil	MEERRGRSRTPLRIILTAILITSVLWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0137363_107218642	3300012202	Vadose Zone Soil	MIEERRSRSRIPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT*
Ga0137374_104996392	3300012204	Vadose Zone Soil	MEERRGRSRTPLRIILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0150985_1224078001	3300012212	Avena Fatua Rhizosphere	LRIILTAILITSALWLAELYMQPTWSKIRSFVLGYFLGSFTMEWVRQRAARMTDG*
Ga0137366_107583282	3300012354	Vadose Zone Soil	MEDRRRRSRTPLRLILTAIFITTSLWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMST*
Ga0157293_101657561	3300012898	Soil	MEERRSRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0157308_100441853	3300012910	Soil	RTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0157306_102445862	3300012912	Soil	LILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE*
Ga0157310_105426552	3300012916	Soil	RSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFAGTFINEWVHQRSSRTVEVVAKQP*
Ga0137410_103320862	3300012944	Vadose Zone Soil	MEERRGRSRTPLRLILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0164299_112381891	3300012958	Soil	LTAILATSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE*
Ga0163162_104876662	3300013306	Switchgrass Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTD*
Ga0120098_10648242	3300015170	Fossill	LILLAIVVTVVLWLAELYMLPTWDKIRSFLLGYFLGSFTMEWIRQRAARDIP*
Ga0137409_106220972	3300015245	Vadose Zone Soil	MEERRGRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS*
Ga0184620_102948562	3300018051	Groundwater Sediment	MEERRGRSRLPLRLILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0184637_102783931	3300018063	Groundwater Sediment	LILTAIFITVALWLGELYMAPTWDKIRAFLLGYFLGSFTMEWIRTRAGREPAEERELSPQRR
Ga0190270_122930531	3300018469	Soil	VWLTELYMQPTWPKIRSFVLGYFVGSFTMEWIRQRAERMTDPLPRPPSLV
Ga0193744_10466002	3300019874	Soil	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0193716_11503582	3300020061	Soil	MEERRGRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0210382_101572622	3300021080	Groundwater Sediment	MEERRSRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0224452_11781372	3300022534	Groundwater Sediment	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0207697_105612662	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0207680_111290531	3300025903	Switchgrass Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIR
Ga0207684_101595542	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVEEERRRRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT
Ga0207660_110037191	3300025917	Corn Rhizosphere	RSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0207689_102387892	3300025942	Miscanthus Rhizosphere	MEERRGRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0207640_101790413	3300025981	Corn Rhizosphere	MEERRGRSRLPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0207675_1007137831	3300026118	Switchgrass Rhizosphere	ILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0209240_10198061	3300026304	Grasslands Soil	MEERRGRSRTPLRIILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0209131_14020872	3300026320	Grasslands Soil	MEERRGRSRTPLRIILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRS
Ga0209802_10262483	3300026328	Soil	MIEERRSRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTT
Ga0209161_100886241	3300026548	Soil	LILTAILITSALWLGELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTSD
Ga0209180_101723783	3300027846	Vadose Zone Soil	MVEERRSRSRTPLRLILTAILITSALWLAELYMAPSWMKIRSFVLGYFLGSFTMEWIRQRSERMTS
Ga0209814_103211322	3300027873	Populus Rhizosphere	MEERRSRSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS
Ga0209590_105543521	3300027882	Vadose Zone Soil	TAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS
Ga0209590_107961232	3300027882	Vadose Zone Soil	MVEERRARSRTPLRLILTAILITSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTS
Ga0209590_108885571	3300027882	Vadose Zone Soil	LYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0209382_107089313	3300027909	Populus Rhizosphere	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRA
Ga0268265_117028262	3300028380	Switchgrass Rhizosphere	RTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0268264_101624551	3300028381	Switchgrass Rhizosphere	GRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0307282_105031232	3300028784	Soil	MEERRGRSRTPLRLILTAILITSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0307304_103050292	3300028885	Soil	LPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0307497_102848921	3300031226	Soil	AILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRAERMTE
Ga0310887_101671541	3300031547	Soil	DFMEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0307468_1003451762	3300031740	Hardwood Forest Soil	MEERRGRSRTPLRLILTAILFTSALWLAELYMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0310891_100150373	3300031913	Soil	GRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0307471_1010682212	3300032180	Hardwood Forest Soil	MEERRGRSRTPLRLILTAIFITSALWLAELNMQPTWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0307472_1015411542	3300032205	Hardwood Forest Soil	MEERRGRSRTPLRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTEG
Ga0310810_110347781	3300033412	Soil	MEERRGRSRTPLRIILTAILITSALWLAELYMQPSWTKIRSFLLGYFLGSFTMEWIRQRSERMTE
Ga0247829_116000542	3300033550	Soil	LRLILTAILTTSALWLAELYMQPSWTKIRSFVLGYFLGSFTMEWIRQRSERMTE
Ga0364943_0357331_2_184	3300034354	Sediment	MQGPERRGRSRAPLKLIMTAVLIGCALWLAELYADPTWAKIRSFLLGYFLGTFVMEWIWQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences