NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097563

Metagenome / Metatranscriptome Family F097563

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097563
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 99 residues
Representative Sequence MTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLVLRERTSLLVKHARELRAPVHPALGVSPSAEAPAEGR
Number of Associated Samples 85
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.08 %
% of genes near scaffold ends (potentially truncated) 35.58 %
% of genes from short scaffolds (< 2000 bps) 87.50 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (69.231 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(10.577 % of family members)
Environment Ontology (ENVO) Unclassified
(32.692 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.654 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.98%    β-sheet: 19.05%    Coil/Unstructured: 53.97%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.283.1.1: Putative modulator of DNA gyrase, PmbA/TldDd1vpba_1vpb0.60054
d.283.1.1: Putative modulator of DNA gyrase, PmbA/TldDd1vl4a_1vl40.58089
b.68.1.1: Sialidases (neuraminidases)d1nsca_1nsc0.57174
c.1.2.4: Tryptophan biosynthesis enzymesd6wx3a_6wx30.57068
a.124.1.1: Phospholipase Cd1ca1a11ca10.56959


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00296Bac_luciferase 10.58
PF00497SBP_bac_3 1.92
PF02534T4SS-DNA_transf 1.92
PF13492GAF_3 1.92
PF00753Lactamase_B 0.96
PF00437T2SSE 0.96
PF02518HATPase_c 0.96
PF13358DDE_3 0.96
PF06429Flg_bbr_C 0.96
PF13751DDE_Tnp_1_6 0.96
PF00083Sugar_tr 0.96
PF13604AAA_30 0.96
PF03006HlyIII 0.96
PF03372Exo_endo_phos 0.96
PF00135COesterase 0.96
PF07690MFS_1 0.96
PF04796RepA_C 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 10.58
COG3505Type IV secretory pathway, VirD4 component, TraG/TraD family ATPaseIntracellular trafficking, secretion, and vesicular transport [U] 1.92
COG1256Flagellar hook-associated protein FlgKCell motility [N] 0.96
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 0.96
COG1558Flagellar basal body rod protein FlgCCell motility [N] 0.96
COG1749Flagellar hook protein FlgECell motility [N] 0.96
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.96
COG4786Flagellar basal body rod protein FlgGCell motility [N] 0.96
COG4787Flagellar basal body rod protein FlgFCell motility [N] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.23 %
All OrganismsrootAll Organisms30.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2032320006|FACEOR_FYWIORV02I1NVCNot Available545Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101678158Not Available680Open in IMG/M
3300000789|JGI1027J11758_12391568Not Available633Open in IMG/M
3300000789|JGI1027J11758_12721067Not Available549Open in IMG/M
3300000955|JGI1027J12803_101891618Not Available527Open in IMG/M
3300002568|C688J35102_120918609All Organisms → cellular organisms → Bacteria2326Open in IMG/M
3300002568|C688J35102_120973205All Organisms → cellular organisms → Bacteria3925Open in IMG/M
3300005329|Ga0070683_101278805Not Available705Open in IMG/M
3300005332|Ga0066388_101025856All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300005337|Ga0070682_101686217Not Available550Open in IMG/M
3300005367|Ga0070667_101497442Not Available634Open in IMG/M
3300005435|Ga0070714_100139820All Organisms → cellular organisms → Bacteria2172Open in IMG/M
3300005435|Ga0070714_100890173Not Available864Open in IMG/M
3300005436|Ga0070713_100073261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae2899Open in IMG/M
3300005436|Ga0070713_101061506Not Available782Open in IMG/M
3300005437|Ga0070710_10971111Not Available617Open in IMG/M
3300005441|Ga0070700_100775587All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300005544|Ga0070686_100122382Not Available1788Open in IMG/M
3300005577|Ga0068857_100482275All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300005614|Ga0068856_100048331All Organisms → cellular organisms → Bacteria → Proteobacteria4192Open in IMG/M
3300005719|Ga0068861_102181216Not Available555Open in IMG/M
3300005764|Ga0066903_107567109Not Available560Open in IMG/M
3300005842|Ga0068858_100803194Not Available918Open in IMG/M
3300006028|Ga0070717_10101635All Organisms → cellular organisms → Bacteria2442Open in IMG/M
3300006028|Ga0070717_10492598All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300006028|Ga0070717_10741404Not Available893Open in IMG/M
3300006028|Ga0070717_11511869Not Available609Open in IMG/M
3300006237|Ga0097621_100545303Not Available1055Open in IMG/M
3300006806|Ga0079220_10761810All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300006881|Ga0068865_101212747Not Available668Open in IMG/M
3300006904|Ga0075424_102031406Not Available606Open in IMG/M
3300006904|Ga0075424_102720081All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006954|Ga0079219_11433123All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300009094|Ga0111539_10860361Not Available1055Open in IMG/M
3300009098|Ga0105245_13035943Not Available520Open in IMG/M
3300009101|Ga0105247_11732944All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009156|Ga0111538_10163412Not Available2828Open in IMG/M
3300009176|Ga0105242_10142778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2079Open in IMG/M
3300009176|Ga0105242_10474484Not Available1184Open in IMG/M
3300009553|Ga0105249_13534461Not Available503Open in IMG/M
3300010048|Ga0126373_10973223All Organisms → cellular organisms → Bacteria → Proteobacteria914Open in IMG/M
3300010152|Ga0126318_10912470Not Available590Open in IMG/M
3300010154|Ga0127503_10509989Not Available525Open in IMG/M
3300010361|Ga0126378_10608406Not Available1207Open in IMG/M
3300010375|Ga0105239_10035745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5455Open in IMG/M
3300010375|Ga0105239_10872694Not Available1032Open in IMG/M
3300010376|Ga0126381_100853539All Organisms → cellular organisms → Bacteria → Proteobacteria1309Open in IMG/M
3300010376|Ga0126381_102513244Not Available738Open in IMG/M
3300010398|Ga0126383_11336244Not Available807Open in IMG/M
3300012212|Ga0150985_103642522All Organisms → cellular organisms → Bacteria2417Open in IMG/M
3300012212|Ga0150985_104290305Not Available724Open in IMG/M
3300012212|Ga0150985_110052288Not Available637Open in IMG/M
3300012469|Ga0150984_110677906Not Available734Open in IMG/M
3300012469|Ga0150984_117122920Not Available1226Open in IMG/M
3300012958|Ga0164299_10687682Not Available713Open in IMG/M
3300012985|Ga0164308_11112789Not Available708Open in IMG/M
3300012985|Ga0164308_11520793Not Available615Open in IMG/M
3300013104|Ga0157370_11659600All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300013296|Ga0157374_12567751Not Available537Open in IMG/M
3300013306|Ga0163162_10642313Not Available1185Open in IMG/M
3300014497|Ga0182008_10021801All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3288Open in IMG/M
3300014497|Ga0182008_10369343All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300014968|Ga0157379_11469385Not Available662Open in IMG/M
3300014969|Ga0157376_11317169Not Available752Open in IMG/M
3300015371|Ga0132258_11718201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1583Open in IMG/M
3300015372|Ga0132256_100196285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2062Open in IMG/M
3300015372|Ga0132256_102277376All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium645Open in IMG/M
3300015374|Ga0132255_103610066Not Available658Open in IMG/M
3300016270|Ga0182036_11450945Not Available575Open in IMG/M
3300016319|Ga0182033_11609352Not Available587Open in IMG/M
3300016371|Ga0182034_11937597Not Available520Open in IMG/M
3300016422|Ga0182039_10847562Not Available814Open in IMG/M
3300017965|Ga0190266_10712214Not Available629Open in IMG/M
3300020070|Ga0206356_10227912All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300021388|Ga0213875_10540546Not Available561Open in IMG/M
3300021560|Ga0126371_11847332Not Available725Open in IMG/M
3300021560|Ga0126371_13626129Not Available521Open in IMG/M
3300025898|Ga0207692_10365322Not Available893Open in IMG/M
3300025915|Ga0207693_10579216Not Available874Open in IMG/M
3300025927|Ga0207687_10035226All Organisms → cellular organisms → Bacteria → Proteobacteria3404Open in IMG/M
3300025928|Ga0207700_10915485Not Available785Open in IMG/M
3300025929|Ga0207664_10454153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila1144Open in IMG/M
3300025938|Ga0207704_11972198Not Available502Open in IMG/M
3300025941|Ga0207711_10185834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1892Open in IMG/M
3300025961|Ga0207712_11768898Not Available554Open in IMG/M
3300026023|Ga0207677_11070847All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300026067|Ga0207678_10755644All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300026078|Ga0207702_10510526All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300026118|Ga0207675_101954961Not Available604Open in IMG/M
3300028708|Ga0307295_10062408Not Available973Open in IMG/M
3300028810|Ga0307294_10151502Not Available773Open in IMG/M
3300031231|Ga0170824_110095061Not Available631Open in IMG/M
3300031231|Ga0170824_123795702Not Available566Open in IMG/M
3300031446|Ga0170820_13776914Not Available580Open in IMG/M
3300031469|Ga0170819_10199654Not Available516Open in IMG/M
3300031474|Ga0170818_102805740Not Available679Open in IMG/M
3300031545|Ga0318541_10410878Not Available757Open in IMG/M
3300031744|Ga0306918_11075087Not Available624Open in IMG/M
3300031747|Ga0318502_10760488Not Available587Open in IMG/M
3300031771|Ga0318546_10253749Not Available1211Open in IMG/M
3300031792|Ga0318529_10461508Not Available591Open in IMG/M
3300031879|Ga0306919_10733057Not Available761Open in IMG/M
3300031996|Ga0308176_12002512Not Available619Open in IMG/M
3300032090|Ga0318518_10695723Not Available517Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.58%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.88%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.92%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.92%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.96%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2032320006Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEORE_40483502032320006SoilMTGLAEAESKFGHMVRGAGGAIFGIEKSPSAGTRREEKLQIGTPDGFVKIAVLLNQPNIDAVLRERTATIVKHAQELRESSQSTLGGFSAPGARTGRL
INPhiseqgaiiFebDRAFT_10167815813300000364SoilMTGLAEAESKFGHMVRGAGGAIFGIEKSPSAGTRQEEKLQIGTPDGFVKIAVLLNQPNIDAVLRERTATIVKHAXELRESSQSTLGGFSAPGARTGRL*
JGI1027J11758_1239156813300000789SoilMTSLAXAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKIAVSLNQPNIDAVLRERTALLAKHAGELRASTHPALATSPLREARAGR
JGI1027J11758_1272106713300000789SoilSLAEAENRFGTVVRRAGGAIFGVERTPSACNRPEEKLQIGTPDGFVRIAVLLNQPDIDAVLQERTAILVMHADQLRSPARRDLAGSVTSEPSALSEPVAPTRRR*
JGI1027J12803_10189161813300000955SoilMTSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKIAVSLNQPNIDAVLRERTALLVKHAGELRASTRPALASSPLREARAGRR*
C688J35102_12091860913300002568SoilMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLVLRERTSLLVKHARELRAPVHPALGVSPSAEAPAEGR*
C688J35102_12097320533300002568SoilMTSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRKEEKLRIGTLDGFVKIAVSLDQPDIDTVLRERTALLVKHAGELRASTHPALASSPLREARAGRR*
Ga0070683_10127880513300005329Corn RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGILRERTALLVRHARELRAPVHPALGVSPSSEA
Ga0066388_10102585623300005332Tropical Forest SoilMTSMAEAEGKFGRVVRGAGGAIFGIETSPSLGSRLEEKLRIGTPDGFVKIAVALNQPDIAAVLRERTALLVKHAEQLRASSRLTLADDPAMPGARAGRR*
Ga0070682_10168621713300005337Corn RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGILRERTALLVRHARELRAPVHPALGVSPSSEALVGDH*
Ga0070667_10149744213300005367Switchgrass RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPIKGARAARR*
Ga0070714_10013982023300005435Agricultural SoilMTSLAEAENKFGRLVRGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVRHARELRAPVHPALGVSPSAEAPAERG*
Ga0070714_10089017323300005435Agricultural SoilMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLQERTAILVMHADQLRSPARRDLAGSFMSERAALSEPVAPTRRR*
Ga0070713_10007326113300005436Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAERKFGPVVRGAGGAIYGIETTPSVGGRQEEKLRIGTLDGFVKVAVSLNQPNIDAVLRERTALLVKHAGEQKAPTQPLLHLRCGEASPRQR*
Ga0070713_10106150623300005436Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAERKFGPVVRDAGGAIYGIESTPSVGGRQEEKLRIGTLDGFVKIAVSLKQPNIDAVLRERTALLVKHAGELRAPTHPALASSPMREVRTGRR*
Ga0070710_1097111123300005437Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDVVLQERTTILVMHADQLRSPARRDLAGSFMSERAALSEPVAPTRRR*
Ga0070700_10077558723300005441Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLVLRERTSLLVKHARELRAPVHPALGVSPSAEALAEGR*
Ga0070686_10012238233300005544Switchgrass RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPVKGARATRR*
Ga0068857_10048227523300005577Corn RhizosphereMTSLVEAENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0068856_10004833143300005614Corn RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGILRERTALLVRHARELRAPVHPALGVSPSSEAFVGDH*
Ga0068861_10218121613300005719Switchgrass RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLQERTAILVMHADQLRSPARRDLAGSFMLERVVPTRPRSF*
Ga0066903_10756710913300005764Tropical Forest SoilMIGGDPDTTATRAGLSEMSSTSWEAQDMTSLAEAESKFGPVVRGAGGAIFGIERAPSVGNRQEEKLQIGTPDGFLRIAVLLNQPDIDAVLRERTVKLVRHAGELRSPARRALSGSAIPEAPSRRR*
Ga0068858_10080319413300005842Switchgrass RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPAKGARATRR*
Ga0070717_1010163523300006028Corn, Switchgrass And Miscanthus RhizosphereMTSLAEVESRFGTAVRGAGGAIFGIERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDVVLQKRTAILVKHADELRSPARRALAGSSIPEPAAAARRRY*
Ga0070717_1049259823300006028Corn, Switchgrass And Miscanthus RhizosphereAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAGAPAEGH*
Ga0070717_1074140423300006028Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDEVLRERTAILVMHADQLRSPARRDLAGSFMSEPAALSEPVAPTRRR*
Ga0070717_1151186913300006028Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENKFGRLVKGAGGAIFGIERAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVRHARELRAPVHPALGVSPSAEAPAERG*
Ga0097621_10054530333300006237Miscanthus RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRL
Ga0079220_1076181023300006806Agricultural SoilAENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0068865_10121274713300006881Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVVLNQPDINAVLQERTAILVMHADQLRSPARRDLAGSFMLERVVPTRPRSF*
Ga0075424_10203140613300006904Populus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLQERTAILVMHADQLRSPARRDLAGSFMSERVVSTRPRSF*
Ga0075424_10272008123300006904Populus RhizosphereGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVRHARELRAPVHPALGVSPSAEAPAERG*
Ga0079219_1143312323300006954Agricultural SoilEAENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0111539_1086036123300009094Populus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRMAVLLNQPDIDAVLRERTAILVMHADQLRSPARRDLAGSFMLERVVSTRPRSL*
Ga0105245_1303594313300009098Miscanthus RhizosphereLVEAQEMFGPAVRDAGGVIFGIEWAPLGGSGREERIQIGTPDGFVKIAVYLNQPDINTVLRERTASLVRHAGELRSPARLALAGSSISEPEAPPRRR*
Ga0105247_1173294423300009101Switchgrass RhizosphereRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0111538_1016341253300009156Populus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVVLNQPDINAVLQERTAILVMHADQLRSPARRDLAGSFMSERVVSTRPRSL*
Ga0105242_1014277823300009176Miscanthus RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDLILRERTAVLVRHAEELRTSSRLTLANPPVKGARATRR*
Ga0105242_1047448423300009176Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVVLNQPDINAVLQERTAILVMHADQLRSPARRDLAGSFMSEPAALSEPVAPTRRR*
Ga0105249_1353446113300009553Switchgrass RhizosphereMSSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKIAVSLNQPDIDTVLRERTVLLVKHAGELRASTHPALASSPMREARAGRW*
Ga0126373_1097322323300010048Tropical Forest SoilMTSLAEADRKFGDVVRSAGGAIFGIEKGVSVGSRQEEKLQIGTPDGFVKSAVLLHQPDIDAVLRERTMILIKHAEELRTASRPTLSGSSIAVAPPGRR*
Ga0126318_1091247013300010152SoilMTSLAEAENKFGRLVRGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVKHARELRAPVHPALGVSPSAGAPAERG*
Ga0127503_1050998913300010154SoilEVVMEVSLPFSDGGPFWRCSRDWEAQGMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLGNPPVKGARATRR*
Ga0126378_1060840613300010361Tropical Forest SoilMTTSLAEAKNRFGPVVRGAGGAIFGIESALCIGGRQGEKLQIGTPDGFVRIAVLLTQPDIEAVLREQTTILVKHAGQLRSPARRALAGSSISEAAPSDAPARRRPIG*
Ga0105239_1003574513300010375Corn RhizosphereLSLPFLDGGPFWRCTRDWEARSMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPVKGARATRR
Ga0105239_1087269413300010375Corn RhizosphereCDMTSLVEAENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKMAVLLNQPNISGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0126381_10085353923300010376Tropical Forest SoilMSAGVISLPLTRRAFGLWKEAKCMTTLAEADRHFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDAVLRERTVVLVKHAEELRTSSRRTLSGSSIPGASPRRR*
Ga0126381_10251324413300010376Tropical Forest SoilVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDTILRERTVILVKHAEELRTSPRPALSSSSIPGTPPGRR*
Ga0126383_1133624413300010398Tropical Forest SoilMTSLAEAENRFGTVVRDAGGAIFGIESVPCIGSRQGEKLQIGTPDGFVRIAVPLNQPNIDAVLHEQTAILVKHAGELRSPAH
Ga0150985_10364252233300012212Avena Fatua RhizosphereMTSLAEAESKFGPVVRDAGGEIYGIETTPSVGGRQEEKLRIGTLDGFVKIAVSLNQPNIDAVLRERTALLFKHAGELRAPSHPALASSPVREARAGRR*
Ga0150985_10429030523300012212Avena Fatua RhizosphereMTSLAEAESKFGPVVRDAGGAIYGIETTPSVGGRQEEKLRIGTLDGFVKTAVSLNRPNIDAVLRERTALLVRHAGELRVPSHPALASSPVREARAGRR*
Ga0150985_11005228813300012212Avena Fatua RhizosphereQSWGGYSMTSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKIAVSLNQPDIDAVLRERTALLVKHAGELRASTYPALASSQLREARAGRR*
Ga0150984_11067790613300012469Avena Fatua RhizosphereMTSLAEAESKFGPVVRDSGGAIYGIETTPSVGGRQEEKLRIGTLDGFVKIAVSLNQPNIDAVLRERTALLFKHAGELRAPSHPALASSPVREARAGRR*
Ga0150984_11712292013300012469Avena Fatua RhizosphereQSWGGYSMTSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKMAVSLNQPNIDAVLRERTALLVKHAGELRASTHPALASSPLREARAGRR*
Ga0164299_1068768213300012958SoilMTSLIEAESKFGSVVRGAGGAIFGIEKAPFVGSRQEEKLLIGTPDGFVKIAVLLNQPDIDAVLRERTSFLVRHAGELRSPARRALAGSFMEEPASATTVRRR*
Ga0164308_1111278923300012985SoilLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRMAVLLNQPDIDAVLQERTAILVMYADQLRSPARKDLAGSFMSEPAALTEPVAPTRRR*
Ga0164308_1152079313300012985SoilMTSLIEAESKFGSVVRGAGGAIFGIEKAPFVGSRQEEKLQIGTPDGFVKIAVLLNQPDIDAVLRERTSLLVRHADELRSPARRALAGSFMEEPVSETTVRRRKY
Ga0157370_1165960023300013104Corn RhizosphereGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD*
Ga0157374_1256775113300013296Miscanthus RhizosphereMTSLAEAESKFGPVVRDAGGAIYGIETTHSVGGRQEEKLRIGTLDGFVKIAVSLNQPNIDAVLRERTALLVKHAGELRASTHPALASSPLREARAGRR*
Ga0163162_1064231323300013306Switchgrass RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRMAVLLNQPDIDAVLRERTAILVMHADQLRSPARRDLAGSFMSEPAALSEPVAPTRRR*
Ga0182008_1002180143300014497RhizosphereMTSLAEAENKFGRLVRGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVKHARELRAPVHPALGVSPSGGAPAERG*
Ga0182008_1036934323300014497RhizosphereMLDMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLVLRERTSLLVKHARELRAPVHPALGVSPSAEAPAEDR*
Ga0157379_1146938523300014968Switchgrass RhizosphereWRCSRDWEAQGMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPVKGARATRR*
Ga0157376_1131716913300014969Miscanthus RhizosphereMTSLVEAQEMFGPAVRDAGGVIFGIEWAPLGGSGREERIQIGTPDGFVKIAVYLNQPDINTVLWERTASLVRHAGELRSPARLALAGSSISEPEAPPRRR*
Ga0132258_1171820133300015371Arabidopsis RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLRERTAILVMHADQLRSPARRDLAGSFMSERAALSEPVARTRPRSF*
Ga0132256_10019628513300015372Arabidopsis RhizosphereMWCGGAGGAIFRIERGPSIGGRHEEKLRIGTLGGFVKIAIPLNQPNIDAILRGETCLPVQHARELRAATQPA
Ga0132256_10227737623300015372Arabidopsis RhizosphereMTSWAEAENKFGRLVRGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVRHARELRAPVHPALGVSPSAEAPA
Ga0132255_10361006623300015374Arabidopsis RhizosphereMTGLAEAESKFGHMVRGAGGAIFGIEKSPSAGTRQEEKLQIGTPDGFVKIAVLLNQPNIDAVLRERTATIVKHAQELRESSQSTLGGFSAPGARTGRL*
Ga0182036_1145094513300016270SoilMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPDIDAVLRERTMILIKHAEELRMASRPTLSGSSIPGAPPGRR
Ga0182033_1160935223300016319SoilDVVRSAGGAIFGIEKGPSFGSRQEEKLQIGTPDGFVKLAVLLHQPDIDAVLRERTMILIKHAEELRMASRPTLSGSSIPGAPPGRR
Ga0182034_1193759713300016371SoilMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDTILRERTVILVKHAEELRTSSHPALSGSSITGTPPGR
Ga0182039_1084756213300016422SoilMTSLAEAENKFGRVVRGAGGAIFGIERTPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVEHARELRA
Ga0190266_1071221423300017965SoilMTSLIEAESKFGSVVRGAGGAIFGIEKAPFVGSRQEEKLQIGTPDGFVKIAVLLNQPDIDAVLRERTSLLVRHAGELRSPARRALAGSCTEEPVPETTVRRRKYP
Ga0206356_1022791223300020070Corn, Switchgrass And Miscanthus RhizosphereMTSLVEAENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD
Ga0213875_1054054613300021388Plant RootsMTSLTEAENQFGGVVRGAGGAIFGIETAASCGGRQQEKLQIGTLDGFVKISVLLNQPNITGVLRERTALLVKHARELREPVHPALGVSPSAEAPAASR
Ga0126371_1184733213300021560Tropical Forest SoilMIVTGSKPARHGGLFGVAFESWEALNMTSLAEAENRFGAVVRGAGGTIAGIERTPSACGRQEEKLQIGTPDGFVRIAVLLDQPDIDAVLKERTAVLVQHAEELRSPARLALAGSSLPGPEVPPRRR
Ga0126371_1362612913300021560Tropical Forest SoilDAGGAIFGIESVPCIGSRQGEKLQIGTPDGFVRIAVPLNQPNIVAVLHEQTAILVKHADELRSPAHRALAGSSISEAAPSDAPARRRPIG
Ga0207692_1036532213300025898Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENKFGRLVRGAGGAIFGIETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINLILRERTSLLVRHARELRAPVHPALGVSPSAEAPAERG
Ga0207693_1057921623300025915Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLQERTAILVMHADQLRSPARRDLAGSFMSERAALSEPVAPTRRR
Ga0207687_1003522613300025927Miscanthus RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPAKGARAT
Ga0207700_1091548513300025928Corn, Switchgrass And Miscanthus RhizosphereMTSLAEAERKFGPVVRDAGGAIYGIESTPSVGGRQEEKLRIGTLDGFVKIAVSLKQPNIDAVLRERTALLVKHAGELRAPTHPALASSPMREVRTGRR
Ga0207664_1045415333300025929Agricultural SoilMTSLAEAERKFGPVVRGAGGAIYGIETTPSVGGRQEEKLRIGTLDGFVKVAVSLNQPNIDAVLRERTALLVKHAGELRAPTHPALASSPVREARVGRW
Ga0207704_1197219813300025938Miscanthus RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVVLNQPDINAVLQERTAILVMHADQLRSPARRDLAGSFMLERVVPTRPRSF
Ga0207711_1018583423300025941Switchgrass RhizosphereMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLANPPAKGARATRR
Ga0207712_1176889813300025961Switchgrass RhizosphereMTSLAEAESRFGHVVRGAGGAIFGIEKGPSVGSVHEEKLQIGTPDGFVKIAVLLNQPNIDAILQERTAVISKHAGKLRTHTPPSLASSPTPGTPAGRR
Ga0207677_1107084713300026023Miscanthus RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGILRERTALLVRHARELRAPVHPALGVSPSSEALVGDH
Ga0207678_1075564413300026067Corn RhizosphereENRFGRVVRGAGGAIFGIESAPSFGGRQAEKLQIGTLDGFVKIAVLLNQPNINGVLRERTALLVQHARELRAPVHPALGVSPSAEARVEGD
Ga0207702_1051052623300026078Corn RhizosphereMTSLAEAENKFGRVVRGAGGAIFGVERAPSFGGRQEEKLQIGTLDGFVKIAVLLNQPNINGILRERTALLVRHARELRAPVHPALGVSPSSEAFVGDH
Ga0207675_10195496113300026118Switchgrass RhizosphereMTSLAEAENRFGTVVRGAGGAIFGVERTPSACNRQEEKLQIGTPDGFVRIAVLLNQPDIDAVLRERTAILVMHADQLRSPARRDLAGSFMLERVVPTRPRSF
Ga0307295_1006240813300028708SoilMTSLIEAESKFGSVVRGAGGAIFGIEKAPFVGSRQEEKLQIGTPDGFVKIAVLLNQPDIDAVLRERTSLLVRHAGELRSPARRA
Ga0307294_1015150223300028810SoilMTSLIEAESKFGSVVRGAGGAIFGIEKAPFVGSRQEEKLQIGTPDGFVKIAVLLNQPDIDAVLRERTSLLVRHAGELRSPARRALAGSFTEEPVPETTVRRRKYP
Ga0170824_11009506113300031231Forest SoilMEASLPFLDGGPFWRRTRDWEARSMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLGNPPVKGARATRR
Ga0170824_12379570213300031231Forest SoilMTGLAEAESKFGHMVRGAGGAIFGIEKSPSAGTRQEEKLQIGTPDGFVKIAVLLNQPNIDAVLRERTATIVKHAQELRESSQSTLGGFSAPGARTGRSKRLP
Ga0170820_1377691413300031446Forest SoilSLPFLDGGPFWRRTRDWEARSMTSLVEAERKFGHVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAVLVRHAEELRTSSRLTLGNPPVKGARATRR
Ga0170819_1019965413300031469Forest SoilMTSLVEAERKFGDVVRDAGGAIFGIERAPSVGSKDEEKLQIGTADGFVKMAVLLNQPNIDAILRERTAFLVRHAEELRTSSRLTLGNPPVKGARATRR
Ga0170818_10280574023300031474Forest SoilMTGLAEAESKFGHMVRGAGGAIFGIEKRPSAGTRQEEKLQIGTPDGFVKIAVLLNQPNIDAVLRERTATIVKHAQELRESSQSTLGGFSAPGARTGRSKRLP
Ga0318541_1041087813300031545SoilMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDTILRERTVILVKHAEELRMSPRPALSSSSIPGTPPGRR
Ga0306918_1107508713300031744SoilMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPDIDTILRERTVILVKHAEELRTSSRPALSGPSIPGTPPGRR
Ga0318502_1076048813300031747SoilRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPDIDTILRERTVILVKHAEELRMSPRPALSSSSIPGTPPGRR
Ga0318546_1025374913300031771SoilMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDTILRERTVILVKHAEELRTSS
Ga0318529_1046150813300031792SoilMTSLAEADRKFGDVVRSAGGAIFGIEKGPSFGSRQEEKLQIGTPDGFVKLAVLLHQPDIDAVLRERTMILIKHAEELRMASRPTLSGSSIPGAPPGRR
Ga0306919_1073305723300031879SoilSLPPTRRAFGLWKEAKCMTTLAEADRQFGDVVRSAGGAIFGIENGPSVGSRQEEKLQIGTPDGFVKSAVLLHQPNIDTILRERTVILVKHAEELRMSPRPALSSSSIPGTPPGRR
Ga0308176_1200251213300031996SoilMTSLAEAENKFGRLVRGAGGAIFGVETAPSFGGRQEEKLQIGTLDGFVKMAVLLNQPNINVILRERTSLLVRHARELRAPVHPALGVSPSAEAPAERG
Ga0318518_1069572313300032090SoilMISLTEAESKFGHVVRDAGGAIFGIETGPSIGGRHEEKLRIGTLDGFVKIAIPMNQPNIDAILRERTCLLVQHARELRAATQPALAASPQRARAGSRMASDT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.