NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F097516

Metagenome Family F097516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097516
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 50 residues
Representative Sequence MVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL
Number of Associated Samples 69
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.96 %
% of genes near scaffold ends (potentially truncated) 42.31 %
% of genes from short scaffolds (< 2000 bps) 97.12 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (86.538 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(26.923 % of family members)
Environment Ontology (ENVO) Unclassified
(87.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.154 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76
1DCM3_09359281
2GOS2241_10380924
3GOS2235_10536273
4GOS2232_10167405
5GOS2232_10249103
6GOS2239_10073713
7GOS2239_10081875
8GOScombined01_1004079751
9JGI25128J35275_10194654
10JGI26062J44793_10130631
11Ga0064346_109362001
12Ga0069134_1716771
13Ga0066845_102366741
14Ga0066845_103676472
15Ga0066845_104427311
16Ga0066830_100442821
17Ga0066377_100956101
18Ga0066370_100453231
19Ga0066371_101132171
20Ga0068468_10275333
21Ga0068468_11405702
22Ga0068468_11410791
23Ga0099675_16298371
24Ga0099693_14397432
25Ga0099693_14870571
26Ga0099693_14870581
27Ga0099693_15646272
28Ga0099954_10689146
29Ga0099954_11511341
30Ga0099954_12472615
31Ga0099954_13152911
32Ga0099954_13402371
33Ga0099954_14008764
34Ga0099954_14733531
35Ga0099963_14334301
36Ga0099963_14376341
37Ga0099963_14420312
38Ga0100229_10516743
39Ga0100229_15234362
40Ga0098038_10612403
41Ga0101666_10737391
42Ga0101667_10954121
43Ga0115011_119180581
44Ga0115012_107182841
45Ga0160422_110536991
46Ga0160422_111319641
47Ga0160423_105032551
48Ga0163110_105786182
49Ga0163110_106209081
50Ga0163110_113246121
51Ga0163179_108981631
52Ga0163111_106003831
53Ga0163111_114574842
54Ga0181381_10891821
55Ga0181417_10830161
56Ga0181385_12692232
57Ga0181386_11724552
58Ga0181380_12148491
59Ga0211696_10488511
60Ga0211586_10701561
61Ga0211667_10528564
62Ga0211589_10439492
63Ga0211703_101364362
64Ga0211666_100586786
65Ga0211499_102152991
66Ga0211651_101728603
67Ga0211472_101439931
68Ga0211472_101601742
69Ga0211699_100425563
70Ga0211699_103381861
71Ga0211699_104110372
72Ga0211644_102700833
73Ga0211557_101299721
74Ga0211557_104250712
75Ga0211512_100163806
76Ga0211556_104127621
77Ga0211695_103193391
78Ga0211564_102505921
79Ga0211473_103784201
80Ga0211473_105497711
81Ga0211473_107040941
82Ga0211548_101860221
83Ga0211713_104280591
84Ga0211547_106046192
85Ga0224906_11124961
86Ga0209348_11177682
87Ga0209348_11243462
88Ga0209348_11638781
89Ga0209348_11777102
90Ga0209645_10605592
91Ga0209645_11074021
92Ga0209645_11512791
93Ga0209645_11666681
94Ga0208878_10210911
95Ga0208763_10407361
96Ga0207993_10627302
97Ga0209433_101234894
98Ga0209404_104401183
99Ga0135227_10367671
100Ga0183748_11171731
101Ga0183757_10534311
102Ga0315331_104903822
103Ga0310343_105113061
104Ga0310343_115473331
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.69%    β-sheet: 23.08%    Coil/Unstructured: 69.23%
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5101520253035404550MVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEELSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
13.5%86.5%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Marine
Seawater
Seawater
Saline Water Concentrator Pond
Marine
Surface Seawater
Seawater
Surface Seawater
Marine
Marine
Seawater
Marine
Seawater
Marine Harbor
Volcanic Co2 Seep Seawater
26.9%19.2%5.8%3.8%26.9%5.8%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DCM3_093592812236876022Saline Water Concentrator PondMVINSQLAPCQQSYRITLDLTVTEDFNPHQIDFRRVFDLSEWESINTHIEEL
GOS2241_103809243300001945MarineMVINSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL*
GOS2235_105362733300001954MarineMVINNQLAPCQQSYRITLDLSVDEDFNPHQIDFRRIFDLTEWESINTHIEEF*
GOS2232_101674053300001958MarineMVINSQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFNLSEWESINTHIEEF*
GOS2232_102491033300001958MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL*
GOS2239_100737133300001962MarineMVINSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL*
GOS2239_100818753300001962MarineMVINSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEEF*
GOScombined01_10040797513300002040MarineMVINNQLAPCQQSYRITLDLSVDEDFNPHQIDFRRVFDLTEWESINTHIEEF*
JGI25128J35275_101946543300002488MarineMVINSQLAPCQQSYRITLNLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEL*
JGI26062J44793_101306313300002955MarineMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0064346_1093620013300003977MarineMVINSQLAPCQQSYRITLDLTVTEDFNPHQIDFRRVFDLSEWESINTHIEEL*
Ga0069134_17167713300004831Surface SeawaterMVINSQLAPCQQSYRITLDLTVDDDFNPRQIDFRRVFDLSDYESINTHIEEL*
Ga0066845_1023667413300005432MarineMVINSQLAPCQQSYRITLNLTVDQDFNPRQIDYQKLFDLSEWESINTHIEEL*
Ga0066845_1036764723300005432MarineFLPMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0066845_1044273113300005432MarineMVINSQLAPCQQSYRITLDLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEL*
Ga0066830_1004428213300005433MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0066377_1009561013300005934MarineMRQLSKRINANLLMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0066370_1004532313300005971MarineMVIDSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0066371_1011321713300006024MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFDLSEWESINTHIEEL*
Ga0068468_102753333300006305MarineMVINSQLAPCQQSFRITLNLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEL*
Ga0068468_114057023300006305MarineMVIDNQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0068468_114107913300006305MarineMVINSQLAPCQQSFRITLDLTVDEDFNPREIDFNKVFNLSEWEHINTHIEEL*
Ga0099675_162983713300006334MarineYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL*
Ga0099693_143974323300006345MarineHAFLLMVINSQLAPCQQSYRITLELTVTEDFNPHQIDFRRVFNLSEWESINTHIEQF*
Ga0099693_148705713300006345MarineRINAFLLMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0099693_148705813300006345MarineQQSYRITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF*
Ga0099693_156462723300006345MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEF*
Ga0099954_106891463300006350MarineMVINSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLLEWESINTHIEEL*
Ga0099954_115113413300006350MarineMVIDSQLAPCQQSYRITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF*
Ga0099954_124726153300006350MarineMVINSQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFNLSEWEHINTHIEEF*
Ga0099954_131529113300006350MarineMVIDSQLAPCQQSYRITLDLTVDEDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0099954_134023713300006350MarineTLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0099954_140087643300006350MarineLNLTVDQDFNPRQINYQRLFDLSEWESINTHIEEL*
Ga0099954_147335313300006350MarineLELTVTEDFNPHQIDFRRVFDLSDWESINTHIEEL*
Ga0099963_143343013300006413MarineMVINSQLAPCQQSFRITLNLTVDEDFNPRQIDYQRLFDLSEWESINTHIEEL*
Ga0099963_143763413300006413MarineQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL*
Ga0099963_144203123300006413MarineMVIDSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEEL*
Ga0100229_105167433300006481MarineMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF*KKASTLHFRGP
Ga0100229_152343623300006481MarineLDLTVDEDFNPRQIDFRRVFNLSDYESINTHIEEF*
Ga0098038_106124033300006735MarineMVINSQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFDLSEWESINTHIEEL*
Ga0101666_107373913300007113Volcanic Co2 Seep SeawaterSQLAPSQQSYRITLDLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEY*
Ga0101667_109541213300007116Volcanic Co2 Seep SeawaterMVINSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0115011_1191805813300009593MarineMVINNQLAPCQQSYRITLDLSVDEDFNPHQIDFRRVFDLTEWESISTHIEEL*
Ga0115012_1071828413300009790MarineMVINSQLAPCQQSYRITLDLSVDEDFNPHQIDFRRVFDLTEWESINTHIEEL*
Ga0160422_1105369913300012919SeawaterMVINSQLAPCQQSYRITLDLTVDDDFNPRQIDYQKLFDLSEWESINTHIEEL*
Ga0160422_1113196413300012919SeawaterSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL*
Ga0160423_1050325513300012920Surface SeawaterMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL*
Ga0163110_1057861823300012928Surface SeawaterQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0163110_1062090813300012928Surface SeawaterMVINSQLASCQQSFRITLNLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEL*
Ga0163110_1132461213300012928Surface SeawaterPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF*
Ga0163179_1089816313300012953SeawaterAPCQQSYRITLDLTVTEDFNPHQINFRRVFDLSEWESINTHIEEL*
Ga0163111_1060038313300012954Surface SeawaterQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEGP*
Ga0163111_1145748423300012954Surface SeawaterMVINSQLAPCQQSYRITLDMTVDDDFNPRQIDFNKVFNLSEWESINTHIEGP*
Ga0181381_108918213300017726SeawaterMVINSQLAPCQQSYRITLDLTVTEDFNPHQINFRRVFDLSEWESINTHIEEL
Ga0181417_108301613300017730SeawaterMVINNQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0181385_126922323300017764SeawaterITLDLTVDEDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0181386_117245523300017773SeawaterYRITLDLTVDEDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0181380_121484913300017782SeawaterNQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0211696_104885113300020252MarineMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFNLSEWESINTHIEEF
Ga0211586_107015613300020255MarineMVINSQLAPCQQSYRITLDLSVDEDFNPHQIDFRRVFNLTEWESISTHIEEF
Ga0211667_105285643300020282MarineMVINSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWERINTHIEGP
Ga0211589_104394923300020315MarineFLPMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEL
Ga0211703_1013643623300020367MarineITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL
Ga0211666_1005867863300020392MarineNSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWERINTHIEGP
Ga0211499_1021529913300020402MarineHNLLMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEGP
Ga0211651_1017286033300020408MarineSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEGP
Ga0211472_1014399313300020409MarineVINSQLAPSQQSYRITLDLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEY
Ga0211472_1016017423300020409MarineSQLAPCQQSFRITLNLTVDDDFNPRQIDYQRLFDLSEWESINTHIEEL
Ga0211699_1004255633300020410MarineMVINSQLAPCQQSFRITLNLTVDEDFNPRQIDYQRLFDLSEWESINTHIEEL
Ga0211699_1033818613300020410MarineITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF
Ga0211699_1041103723300020410MarineIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFNLSEWESINTHIEEL
Ga0211644_1027008333300020416MarineNSQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEGP
Ga0211557_1012997213300020418MarineQQSYRITLELTVTEDFNPHQIDFRRVFDLSEWESINTHIEQF
Ga0211557_1042507123300020418MarineLAPCQQSYRITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF
Ga0211512_1001638063300020419MarineMVINSQLAPCQQSYRITLDLTVDDDFNPRQIDFRRVFDLSDYESINTHIEEL
Ga0211556_1041276213300020432MarineQQSYRITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF
Ga0211695_1031933913300020441MarineMVIDSQLAPCQQSYRITLDLTVDQDFNPRQIDFRRVFNLSDYESINTHIEEF
Ga0211564_1025059213300020445MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFDLSEWESISTHIEEL
Ga0211473_1037842013300020451MarineLMVINSQLAPCQQSYRITLELTVTEDFNPHQIDFRRVFDLSDYESINTHIEQF
Ga0211473_1054977113300020451MarinePCQQSYRITLNLTVDEDFNPRQIDFRRVFDLSDYESINTHIEEL
Ga0211473_1070409413300020451MarinePCQQSYRITLNLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF
Ga0211548_1018602213300020454MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0211713_1042805913300020467MarineSQLAPCQQSYRITLDLTVTEDFNPHQIDFRRVFDLSEWESINTHIEQF
Ga0211547_1060461923300020474MarineLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0224906_111249613300022074SeawaterMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFDLSEWESINTHIEEL
Ga0209348_111776823300025127MarineMVINSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL
Ga0209348_112434623300025127MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF
Ga0209348_116387813300025127MarineMVINSQLAPCQQSYRITLNLTVDQDFNPRQIDYQKLFDLSEWESINTHIEEL
Ga0209348_117771023300025127MarineMVINSQLAPCQQSFRITLDLTVDNDFNPRQIDYQRLFDLSEWESINTHIEEF
Ga0209645_106055923300025151MarineMVINSQLAPCQQSYRITLDLTVDQDFNPRQIDYQRLFDLSEWESINTHIEEL
Ga0209645_110740213300025151MarinePCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL
Ga0209645_115127913300025151MarineMVINSQLAPCQQSFRITLDLTVDDDFNPRQIDYQKLFDLSEWESINTHIEEL
Ga0209645_116666813300025151MarineMVINSQLAPCQQSFRITLNLTVDQDFNPRQIDYQKLFDLSEWESINTHIEEL
Ga0208878_102109113300026083MarineMVIDSQLAPCQQSYRITLDLTVDEDFNPRQIDFRRVFNLSDYESINTHIEEF
Ga0208763_104073613300026136MarineAFLPMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF
Ga0207993_106273023300026270MarineMVINSQLAPCQQSYRITLDLTVDEDFNPRQIDFSKVFNLSEWESINTHIEEL
Ga0209433_1012348943300027774MarineMVINSQLAPCQKSYRITLDLTVDDDFNPRQIDFNKVFNLSEWESINTHIEGP
Ga0209404_1044011833300027906MarineMVINNQLAPCQQSYRITLDLSVDEDFNPHQIDFRRVFDLTEWESISTHIEEL
Ga0135227_103676713300029302Marine HarborGHTEYAFLPMVINSQLAPSQQSYRITLDLTVDQDFNPRQIDYKRLFDLSEWENIDTHIEE
Ga0183748_111717313300029319MarineSYRITLDLTVDEDFNPRQIDFNKVFNLSEWEHINTHIEEL
Ga0183757_105343113300029787MarineMVINNQLAPCQQSYRITLDLTVDDDFNPRQIDFNKVFDLSEWESINTHIEEL
Ga0315331_1049038223300031774SeawaterMVINNQLAPCQQSYRITLDLTVDQDFNPRQIDFNKVFSLSEWESINTHIEEL
Ga0310343_1051130613300031785SeawaterHAFLLMVIDSQLAPCQQSYRITLELTVTEDFNPHQIDFRRVFDLSDWESINTHIEQF
Ga0310343_1154733313300031785SeawaterMVIDSQLAPCQQSFRITLDLTVDEDFNPRQIDFNKVFNLSEWESINTHIEEF


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