Basic Information | |
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Family ID | F097498 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 60 residues |
Representative Sequence | MEFGNKYLGGDLNKDYVSIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Number of Associated Samples | 57 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 81.73 % |
% of genes near scaffold ends (potentially truncated) | 20.19 % |
% of genes from short scaffolds (< 2000 bps) | 92.31 % |
Associated GOLD sequencing projects | 41 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.46 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (64.423 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (71.154 % of family members) |
Environment Ontology (ENVO) | Unclassified (97.115 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (98.077 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 34.48% Coil/Unstructured: 65.52% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.46 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Seawater Marine Marine Diffuse Hydrothermal Flow Volcanic Vent Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25129J35166_10057174 | 3300002484 | Marine | MEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEINFTIWPVQLTFGIGKNRSLFRD* |
FS891DNA_103556312 | 3300003539 | Diffuse Hydrothermal Flow Volcanic Vent | MEFGNKYLGGDLSKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD* |
FS896DNA_101052962 | 3300003540 | Diffuse Hydrothermal Flow Volcanic Vent | MEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGRNRSLFRD* |
Ga0068471_13791904 | 3300006310 | Marine | VEFGNKYLGGDINKDYASFFIAPFGIEVFSYNEDIEINFTMWPVQFTFGIGKNRSLFRD* |
Ga0068503_105728703 | 3300006340 | Marine | MEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPIQFTFGIGRNRSLFRS* |
Ga0098033_10175532 | 3300006736 | Marine | MIMEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEINFTIWPVQLTFGIGKNRSLFRD* |
Ga0098033_10450245 | 3300006736 | Marine | VEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDVEMSLTIWPIQLTFCIGKNRSLFRK* |
Ga0098033_10917082 | 3300006736 | Marine | MKFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDMEINFTIWPVQFTFGIGKNRSLFRD* |
Ga0098033_11011352 | 3300006736 | Marine | GDLNKDYVSIFIIPFGIEVFAYNEDIEINFTIWPVQFTFGIGRNRSLFRD* |
Ga0098033_11435112 | 3300006736 | Marine | VEFGNRYLGGDFSKDYVSIFMFPIGLEFFAYNEDVEVSLTIWPIQLTFCIGKNRSLFRN* |
Ga0098033_11602552 | 3300006736 | Marine | LVRRKIYLFNAGGQIVEFGNKYLGGDINKDYASIFIAPFGIEVFSYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0098033_11683972 | 3300006736 | Marine | VEFGNKYFGGDLSKDYVSVFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFRD* |
Ga0098035_10459012 | 3300006738 | Marine | MIMEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEMCFTLWPIKLTFGIGKNRSLFRD* |
Ga0098035_10845582 | 3300006738 | Marine | VEFGNRYLGGDFSKDYISMFIFPIGLEFFAYNEDVEVSLTIWPIQLTFCIGKNRSLFRN* |
Ga0098035_11439852 | 3300006738 | Marine | VEFGNKYVGGDLGKSYSSLFIFPLGIELFFYNEDIELNFTIWPLQLTFGIGKNRSLFN* |
Ga0098035_11621682 | 3300006738 | Marine | LVRRKIYLFNAGGQIVEFGNKYLGGDINKDYASIFIAPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0098035_13022652 | 3300006738 | Marine | VEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDLEVSLTIWPIQFTFCIGKNRSLFRN* |
Ga0098035_13132532 | 3300006738 | Marine | MEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD* |
Ga0098058_11585262 | 3300006750 | Marine | VEFGNRYLGGDFSKDYISMFIFPIGLEFFAYNEDVEVSLTIWPIQLTFCIGKNRSLFRK* |
Ga0098040_11453092 | 3300006751 | Marine | MKFGNKYIGGDLDKDYASIFIVPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0098040_11784612 | 3300006751 | Marine | VEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDVEMSLTIWPIQLTFCIGKNRSLFRN* |
Ga0098039_10748732 | 3300006753 | Marine | MIMEVGNKYVGGDFGGSYYSFFIFPLGIEVFFFNEDIEINFTVWPVQLTFGIGKNRSLFRD* |
Ga0098039_11260892 | 3300006753 | Marine | GNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPIQFTFGIGRNRSLFKG* |
Ga0098039_11322954 | 3300006753 | Marine | VEFGNKYFGGDLSKDYVSVFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLF |
Ga0098039_12666882 | 3300006753 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIQVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD* |
Ga0098044_11076781 | 3300006754 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQLTFGIGKNRSLFRN* |
Ga0098044_12768242 | 3300006754 | Marine | MEFGNNYVGGDAGKNYFSLFIFPIGIELFFFNEDIEISLTFWPVKITFGIGRNRSLFNN* |
Ga0098044_13837081 | 3300006754 | Marine | VEFGNKYVGGDLSKDYSSLFLFPLGVELFFYNEDVELNLTIWPLQLTFGVGRNRSLFKG* |
Ga0098055_10485133 | 3300006793 | Marine | MEFGNKYLGGDLNKDYVSIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD* |
Ga0098055_14006852 | 3300006793 | Marine | MEFGNKYIGGDLNKDYASIFIAPFGIEVFSHNEDIEINLTIWPVQLTFGIGKNRSLFRD* |
Ga0098057_10529232 | 3300006926 | Marine | VEFGNKYLGGDINKDYASIFIAPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0098057_11106492 | 3300006926 | Marine | MEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRG* |
Ga0098057_11546152 | 3300006926 | Marine | VEFGNRYLGGDFSKDYVSIFMFPIGLEFFAYNEDVEVSLTIWPIQFTFCIGKNRSLFRN* |
Ga0098034_10423423 | 3300006927 | Marine | VEFGNKYLGGDFSKDYVSIFIFPIGLEFFAYNEDVEISLTIWPIQLTFCIGKNRSLFRN* |
Ga0098034_10930952 | 3300006927 | Marine | MEFGNKYVGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGRNRSLFRD* |
Ga0098034_11105752 | 3300006927 | Marine | VEFGNKYFGGDFNKDYISIFIFPIGLEFFAYNEDLEISLTIWPIQLTFCIGKNRSLFRK* |
Ga0098034_11822052 | 3300006927 | Marine | VEFGNKYLGGDFGGNYCSFFIFPIGIEIFFFNEDLELCVSFWPVKLTFGIGRNRSLFN* |
Ga0098034_12014212 | 3300006927 | Marine | MEFGNNYVGGDAGKNYYSFFIFPVGIELFFFNEDIEVSLTFWPVKITFGIGRNRSLFNN* |
Ga0098036_11564911 | 3300006929 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQLTFGIGKNRSLFRD* |
Ga0105019_11268443 | 3300007513 | Marine | VEFGNKYLGGDISKDYISIFLFPMGIEFFAYNEDVEISFTIWPVQLTFCIGKNRSLFKG* |
Ga0110931_11083492 | 3300007963 | Marine | YIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD* |
Ga0098052_10174012 | 3300008050 | Marine | MEFGNKYIGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQFTFGIGKNRSLFRD* |
Ga0098052_10205972 | 3300008050 | Marine | MEFGNKYIGGNLNKDYASIFIAPFGIEVFSHNEDIEINLTIWPVQLTFGIGKNRSLFRD* |
Ga0114898_100059910 | 3300008216 | Deep Ocean | VEFGNKYLGGDINKDYASIFIAPFGIEVFSYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0114898_10087582 | 3300008216 | Deep Ocean | VEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDLEVSLTIWPIQLTFCIGKNRSLFRN* |
Ga0114898_10409392 | 3300008216 | Deep Ocean | MEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD* |
Ga0114899_12270721 | 3300008217 | Deep Ocean | MEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRG* |
Ga0114905_11158212 | 3300008219 | Deep Ocean | MEFGNKYLGGDLSKDYISIFLFPFGLEFFAYNEDLEVSLTIWPVQFMFCIGRNRTLFNN* |
Ga0114905_11786002 | 3300008219 | Deep Ocean | VEFGNKYLGGDLNKDYASIFIVPFGIEIFAYNEDIEIIFTIWPVQFTFGIGKNRSLFRD* |
Ga0114910_10494173 | 3300008220 | Deep Ocean | VEFGNKYFGCDLSKDYVSIFIVPFGIEIFAYNEDLEINFTIWPAQLTFGIGRNRSLFRD* |
Ga0114996_108206461 | 3300009173 | Marine | IHQLNARGKVMEFGNKYLGGDLNKDYASFFIMPFGIEVFAYSEDIEINFTIWPVQFTFGIGRNRSLFTD* |
Ga0114902_10430553 | 3300009413 | Deep Ocean | VEFGNKYFGGDLSKDYVSIFIVPFGIEIFAYNEDLEINFTIWPAQLTFGIGRNRSLFRD* |
Ga0114909_11297562 | 3300009414 | Deep Ocean | MEFGNKYLGGDLSKDYISIFLFPFGLEFFAYNEDLEVSLTIWPVQFMFCFGRNRTLFNN* |
Ga0114908_12519441 | 3300009418 | Deep Ocean | VEFGNKYFGGDLSKDYVSVFIVPFGIEIFAYNEDLEINFTIWPAQLTFGIGRNRSLFRD* |
Ga0114900_10377262 | 3300009602 | Deep Ocean | VEFGNKYFGADLSTDYVSIFIVPFGIEIFAYNEDLEINFTIWPAQLTFGIGRNRSLFRD* |
Ga0114906_10880022 | 3300009605 | Deep Ocean | KYFGGDLSKDYVSVFIVPFGIEIFAYNEDLEINFTIWPAQLTFGIGRNRSLFRD* |
Ga0114906_11438612 | 3300009605 | Deep Ocean | MEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTMWPVQLTFGIGRNRSLFRD* |
Ga0114912_11648562 | 3300009620 | Deep Ocean | VEFGNKYFGCDLSKDYVSIFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFRD* |
Ga0098056_12847161 | 3300010150 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEIFAYNEDIEINLTIWPIQFTFGIGRNRSLFRD* |
Ga0098061_13252801 | 3300010151 | Marine | VEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTMWPVQFTFGIGKNRSLFRD* |
Ga0098059_12283382 | 3300010153 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEVFSHNEDIEINLTIWPVQLTFGIGKNRSLFRD* |
Ga0098047_100984392 | 3300010155 | Marine | VEFGNKYFGGDLSKDYISIFIVPFGIEIFAYSEDLEINFTIWPVQLTFGIGRNRSLFRD* |
Ga0098047_101610062 | 3300010155 | Marine | YIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD* |
Ga0098047_101944582 | 3300010155 | Marine | MEFGNNYVGGDAGKNYYSFFIFPVGIELFFFNEDIEISLTFWPVKITFGIGRNRSLFNN* |
Ga0098047_102025242 | 3300010155 | Marine | VEFGNKYFGGDLSKDYVSVFIIPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFKD* |
Ga0098047_102706342 | 3300010155 | Marine | YLGGDFSKDYVSMFIFPIGLEFFAYNEDLEVSLTIWPIQLTFCIGKNRSLFRK* |
Ga0098047_103866202 | 3300010155 | Marine | MEFGNNYLGGDLNKDYISIFIFPFGLELFAYSTDLEISFSIWPMRFTFCIGRNRTLFRS* |
Ga0098047_104018342 | 3300010155 | Marine | MEFGNKYLGGDLSKDYVSIFIAPFGIELFAYNEDLEINFTIWPVQFTFGIGRNRSLFRD* |
Ga0098047_104059982 | 3300010155 | Marine | MKFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD* |
Ga0163108_107394662 | 3300012950 | Seawater | VEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD* |
Ga0181375_10430492 | 3300017718 | Marine | LVRRKIHLFNVRGEIVEFGNKYFGCDLSKDYVSIFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFRD |
Ga0181432_10312702 | 3300017775 | Seawater | VEFGNKYFGGDLSKDYVSVFVVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFRD |
Ga0181432_10594382 | 3300017775 | Seawater | VEFGNKYVGGDLGKNYYSLFLYPIGVELFFYNEDVELSFTIWPLQLTFCMGRNRSLFND |
Ga0187827_101663531 | 3300022227 | Seawater | GGKMIMEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Ga0187827_102041581 | 3300022227 | Seawater | MIMEFGNKYVGGDCGGNYYSLFIYPIGIEFFFFNEDIEVSLTFWPLKITFGIGRNRSLFS |
Ga0207892_10450912 | 3300025050 | Marine | MEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGKNRSLFRD |
Ga0207887_10762992 | 3300025069 | Marine | IHLLNARGEIMEFGNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGRNRSLFRD |
Ga0208920_10194952 | 3300025072 | Marine | KYLGGDINKDYASIFIAPFGIEVFSYNEDIEINFTMWPVQLTFGIGKNRSLFRD |
Ga0208920_10375522 | 3300025072 | Marine | VEFGNKYFGGDLSKDYVSVFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFRD |
Ga0208920_10673193 | 3300025072 | Marine | MIMEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEINFTIWPVQLTFGIGKNRSLFR |
Ga0208011_10862922 | 3300025096 | Marine | MKFGNKYIGGDLDKDYASIFIVPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD |
Ga0208010_10148712 | 3300025097 | Marine | VEFGNKYLGGDFSKDYVSIFIFPIGLEFFAYNEDVEISLTIWPIQLTFCIGKNRSLFRN |
Ga0208010_10389701 | 3300025097 | Marine | FNAGGKMIMEVRNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Ga0208010_10663802 | 3300025097 | Marine | VEFGNKYLGGDINKDYASIFIAPFGIEVFAYNEDIEINFTMWPVQLTFGIGKNRSLFRD |
Ga0208010_11044822 | 3300025097 | Marine | VEFGNKYLGGDFGGNYCSFFIFPIGIEIFFFNEDLELCVSFWPVKLTFGIGRNRSLFN |
Ga0208553_11058342 | 3300025109 | Marine | VEFGNKYFGGDLSKDYISIFIIPFGIEIFAYNEDLEINFTIWPVQLTFGIGKNRSLFKD |
Ga0208553_11365812 | 3300025109 | Marine | VEFGNKYVGGDLGKSYSSLFIFPLGIELFFYNEDIELNFTIWPLQLTFGIGKNRSLFN |
Ga0209349_11215763 | 3300025112 | Marine | MEFGNKYLGGDLNKDYISIFIAPFGIELFAYNEDIEISFTIWPVQFTFCIGRNRSLFRD |
Ga0208433_10550122 | 3300025114 | Marine | IVEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDLEVSLTIWPIQLTFCIGKNRSLFRN |
Ga0208433_11472871 | 3300025114 | Marine | MIMEVGNKYVGGDFGGNYYSFFIFPLGIEVFFFNEDIEMCFTLWPIKLTFGIGKNRSLFR |
Ga0208790_11431092 | 3300025118 | Marine | MEFGNKYIGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQFTFGIGKNRSLFRD |
Ga0208919_10864773 | 3300025128 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQLTFGIGKNRSLFRD |
Ga0209128_10332563 | 3300025131 | Marine | VEFGNKYLGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQLTFGIGKNRSLFRN |
Ga0209128_11903111 | 3300025131 | Marine | GNKYLGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQFTFGIGRNRSLFRD |
Ga0208299_10076668 | 3300025133 | Marine | MEFGNKYLGGDLNKDYASIFIAPFGIEVFSHNEDIEINLTIWPVQLTFGIGKNRSLFRD |
Ga0209756_13247251 | 3300025141 | Marine | LVRGKIHLFNARGTLMEFGNKYLGGDLNKDYASIFIAPFGIEVFSYNEDIEINLTIWPVQLTFGIGKNRSLFRD |
Ga0209756_13446482 | 3300025141 | Marine | LVRRKIYLFNAGGQIVEFGNKYLGGDFSKDYVSVFIFPIGLEFFAYNEDLEVSLTIWPIQLTFCIGKNRSLFRK |
Ga0208182_10260952 | 3300025251 | Deep Ocean | VEFGNKYLGGDFSKDYVSMFIFPIGLEFFAYNEDLEVSLTIWPIQLTFCIGKNRSLFRN |
Ga0208180_10318762 | 3300025277 | Deep Ocean | MEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Ga0208449_10974751 | 3300025280 | Deep Ocean | YIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Ga0208315_10666392 | 3300025286 | Deep Ocean | MEFGNKYLGGDLSKDYISIFLFPFGLEFFAYNEDLEVSLTIWPVQFMFCIGRNRTLFNN |
Ga0208316_10808632 | 3300025296 | Deep Ocean | ARGTLMEFGNKYIGGDLNKDYASIFIVPFGIEVFAYNEDIEINFTIWPVQLTFGIGKNRSLFRD |
Ga0208684_10775532 | 3300025305 | Deep Ocean | FGNKYFGGDLSKDYVSIFIVPFGIEIFAYNEDLEINFTIWPVQLTFGIGRNRSLFKG |
Ga0209501_106108432 | 3300027844 | Marine | KIHQLNARGKVMEFGNKYLGGDLNKDYASFFIMPFGIEVFAYSEDIEINFTIWPVQFTFGIGRNRSLFTD |
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