Metagenome Family F097422

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097422
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	139 residues
Representative Sequence	MLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.38 %
% of genes near scaffold ends (potentially truncated)	49.04 %
% of genes from short scaffolds (< 2000 bps)	74.04 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (10.577 % of family members)
Environment Ontology (ENVO)	Unclassified (64.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.89% β-sheet: 24.68% Coil/Unstructured: 54.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.129.6.2: Ssp2 C-terminal domain-like	d2qrda_	2qrd	0.67928
d.129.6.2: Ssp2 C-terminal domain-like	d3t4na_	3t4n	0.67723
d.129.3.1: Pathogenesis-related protein 10 (PR10)-like	d4a8ua_	4a8u	0.67525
d.129.3.0: automated matches	d2vjga_	2vjg	0.67309
d.129.3.5: AHSA1 domain	d2nn5a1	2nn5	0.6714

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03932	CutC	17.31
PF02897	Peptidase_S9_N	17.31
PF01061	ABC2_membrane	9.62
PF00005	ABC_tran	4.81
PF13474	SnoaL_3	1.92
PF01112	Asparaginase_2	1.92
PF13442	Cytochrome_CBB3	0.96
PF13304	AAA_21	0.96
PF10518	TAT_signal	0.96
PF01425	Amidase	0.96
PF04775	Bile_Hydr_Trans	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	17.31
COG1770	Protease II	Amino acid transport and metabolism [E]	17.31
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	17.31
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	1.92
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	76.92 %
Unclassified	root	N/A	1.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	76.92 %
Unclassified	root	N/A	1.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	75.96 %
Unclassified	root	N/A	1.92 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	75.96 %
Unclassified	root	N/A	1.92 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	75.96 %
Unclassified	root	N/A	1.92 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	75.96 %
Unclassified	root	N/A	1.92 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	75.96 %
Unclassified	root	N/A	1.92 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105617968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105618630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1924	Open in IMG/M
3300004114\|Ga0062593_101238214	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300004463\|Ga0063356_101398774	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005327\|Ga0070658_10031113	All Organisms → cellular organisms → Bacteria	4285	Open in IMG/M
3300005327\|Ga0070658_10120104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2184	Open in IMG/M
3300005328\|Ga0070676_10056799	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300005328\|Ga0070676_10141380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1533	Open in IMG/M
3300005329\|Ga0070683_100029265	All Organisms → cellular organisms → Bacteria	4984	Open in IMG/M
3300005329\|Ga0070683_100157406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2155	Open in IMG/M
3300005336\|Ga0070680_100893954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300005337\|Ga0070682_100410327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1027	Open in IMG/M
3300005347\|Ga0070668_100160694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1823	Open in IMG/M
3300005347\|Ga0070668_100739335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	870	Open in IMG/M
3300005355\|Ga0070671_100406834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1164	Open in IMG/M
3300005356\|Ga0070674_100896195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300005364\|Ga0070673_101462853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300005366\|Ga0070659_100085105	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300005367\|Ga0070667_100052454	All Organisms → cellular organisms → Bacteria → Acidobacteria	3442	Open in IMG/M
3300005530\|Ga0070679_101010684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	776	Open in IMG/M
3300005543\|Ga0070672_100985279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300005543\|Ga0070672_101884710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300005544\|Ga0070686_101124033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300005564\|Ga0070664_102198019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300005578\|Ga0068854_100706111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	871	Open in IMG/M
3300005614\|Ga0068856_102649022	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300005616\|Ga0068852_100560377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1144	Open in IMG/M
3300005616\|Ga0068852_101992785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300005719\|Ga0068861_101093822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300005834\|Ga0068851_10013470	All Organisms → cellular organisms → Bacteria	3871	Open in IMG/M
3300006046\|Ga0066652_100000952	All Organisms → cellular organisms → Bacteria	14407	Open in IMG/M
3300006358\|Ga0068871_101652133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300006881\|Ga0068865_100308242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1269	Open in IMG/M
3300006954\|Ga0079219_11388978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300009148\|Ga0105243_10192961	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300009174\|Ga0105241_12636164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300009177\|Ga0105248_10101029	All Organisms → cellular organisms → Bacteria	3250	Open in IMG/M
3300010042\|Ga0126314_10775002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300010375\|Ga0105239_12270458	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300010397\|Ga0134124_10600759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1078	Open in IMG/M
3300012469\|Ga0150984_122267417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300012955\|Ga0164298_10303437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	990	Open in IMG/M
3300012961\|Ga0164302_10253188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1120	Open in IMG/M
3300012977\|Ga0134087_10602344	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	569	Open in IMG/M
3300012985\|Ga0164308_10081045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2217	Open in IMG/M
3300012986\|Ga0164304_10094753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1764	Open in IMG/M
3300012987\|Ga0164307_10351936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1069	Open in IMG/M
3300012988\|Ga0164306_10071174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2179	Open in IMG/M
3300012989\|Ga0164305_10049179	Not Available	2456	Open in IMG/M
3300013100\|Ga0157373_10268417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1208	Open in IMG/M
3300013102\|Ga0157371_11069228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300013297\|Ga0157378_10355212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1433	Open in IMG/M
3300013297\|Ga0157378_13278935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300013306\|Ga0163162_12300223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300013306\|Ga0163162_12926588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300013307\|Ga0157372_10434745	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300013307\|Ga0157372_12250487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300013308\|Ga0157375_10724373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1147	Open in IMG/M
3300015262\|Ga0182007_10315045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300015371\|Ga0132258_10452005	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300015371\|Ga0132258_10523180	Not Available	2969	Open in IMG/M
3300015371\|Ga0132258_11640420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1623	Open in IMG/M
3300017792\|Ga0163161_10081752	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300018476\|Ga0190274_11069554	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	885	Open in IMG/M
3300021445\|Ga0182009_10272365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	846	Open in IMG/M
3300022756\|Ga0222622_11063621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300025907\|Ga0207645_10068196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2274	Open in IMG/M
3300025907\|Ga0207645_10929774	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300025909\|Ga0207705_10254159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1341	Open in IMG/M
3300025909\|Ga0207705_10875516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	696	Open in IMG/M
3300025919\|Ga0207657_10136517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2006	Open in IMG/M
3300025919\|Ga0207657_11049201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	624	Open in IMG/M
3300025920\|Ga0207649_10648314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300025921\|Ga0207652_10527137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1063	Open in IMG/M
3300025923\|Ga0207681_11139647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	655	Open in IMG/M
3300025930\|Ga0207701_10118011	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300025931\|Ga0207644_11542596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300025933\|Ga0207706_10190825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1798	Open in IMG/M
3300025935\|Ga0207709_10062876	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300025940\|Ga0207691_10080651	All Organisms → cellular organisms → Bacteria	2926	Open in IMG/M
3300025940\|Ga0207691_10161439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1966	Open in IMG/M
3300025940\|Ga0207691_11441404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300025941\|Ga0207711_11056211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	752	Open in IMG/M
3300025941\|Ga0207711_11747456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300025945\|Ga0207679_10533193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1051	Open in IMG/M
3300025960\|Ga0207651_11089297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300025972\|Ga0207668_10041132	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300025972\|Ga0207668_10790723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300025981\|Ga0207640_10809073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300026023\|Ga0207677_10697178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	901	Open in IMG/M
3300026035\|Ga0207703_10791751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	905	Open in IMG/M
3300026088\|Ga0207641_10336635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1435	Open in IMG/M
3300026116\|Ga0207674_12001525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300026142\|Ga0207698_11299587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	742	Open in IMG/M
3300028754\|Ga0307297_10280567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300030496\|Ga0268240_10001012	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300031366\|Ga0307506_10263360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	661	Open in IMG/M
3300031548\|Ga0307408_102214259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300031716\|Ga0310813_11509727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300031938\|Ga0308175_100164440	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300031938\|Ga0308175_102648240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300031939\|Ga0308174_10046263	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300031996\|Ga0308176_10009066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6856	Open in IMG/M
3300032074\|Ga0308173_10051766	All Organisms → cellular organisms → Bacteria	2994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.35%
Environmental	Environmental	33.65%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.35%
Terrestrial	Environmental → Terrestrial	32.69%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	46.15%
Soil	Environmental → Terrestrial → Soil	32.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.23%
Sediment	Environmental → Aquatic → Sediment	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	30.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	6.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	30.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	10.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	9.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056179681	3300000364	Soil	QSQWGQSKWVRTCWQSSCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGSKPETEPFREGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSDEREVRNSDDPTERALWTRLQQLRLAIRQP*
INPhiseqgaiiFebDRAFT_1056186303	3300000364	Soil	MPTSTPRRRCAKHPRPSLARLRALAATAILAALPACGLLGGKPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGSKPETEPFREGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSDEREVRNSDDPTERALWTRLQQLRLAIRQP*
Ga0062593_1012382142	3300004114	Soil	MLRRTRLLLCLPLVAALPACGLLRGAPAERDVTLDLPVSRSEAVRRTLTAFREQGYTIRSTLTSGLKPETEPFRQGEAEAVFRAEIAGTAASSRVVLSGTYHRVQFGGIVRTGEHEVRNSDDPTEHALWNRLQQLRLAIREP*
Ga0063356_1013987742	3300004463	Arabidopsis Thaliana Rhizosphere	MLRRTRLLLCLLLVAALPACGLLRGAPAERDVTLDLPVSRSEAVRRTLTAFREQGYTIRSTLTSGLKPETEPFRQGEAEAVFRAEIAGTAASSRVVLSGTYHRVQFGGIVRTGEHEVRNSDDPTEHALWNRLQQLRLAIREP*
Ga0070658_100311133	3300005327	Corn Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0070658_101201044	3300005327	Corn Rhizosphere	MRVRSAMMTRFARLLATVTTLAALTGCGLLGGRPAERDVTIDLPVSRATAIRRVTSAFRDEGYVIRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSARVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP*
Ga0070676_100567992	3300005328	Miscanthus Rhizosphere	MRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS*
Ga0070676_101413802	3300005328	Miscanthus Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070683_1000292653	3300005329	Corn Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0070683_1001574064	3300005329	Corn Rhizosphere	ERDVTIDLPVPRAEAVRRVTSAFREQGYVVRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSARVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP*
Ga0070680_1008939542	3300005336	Corn Rhizosphere	AEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTPRVVLSGTYHTKQFGGIVKSSEHEVRNTDDPTERALWNRLQQLRLAIREQ*
Ga0070682_1004103272	3300005337	Corn Rhizosphere	MLGALAACGLIGGRPAERDVTIDLPISRSAAIRRVMSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREDAGK*
Ga0070668_1001606941	3300005347	Switchgrass Rhizosphere	GQSQWGQSQWGQSQWGQSQWVRTCWQSSCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSHVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070668_1007393352	3300005347	Switchgrass Rhizosphere	MTRLLRFLAGATMLAALPGCGLFRGAAEERDVTIDLPVSRSEAVRRTLAVFREEGYVIRATLTSGTQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWNRLQQLRLAIREP*
Ga0070671_1004068341	3300005355	Switchgrass Rhizosphere	MLGTLPACGLIGGRPAERDVTIDLPVSRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP*
Ga0070674_1008961951	3300005356	Miscanthus Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070673_1014628532	3300005364	Switchgrass Rhizosphere	RDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSHVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070659_1000851051	3300005366	Corn Rhizosphere	TGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0070667_1000524542	3300005367	Switchgrass Rhizosphere	MRLRAPLAAIVCSVVLTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070679_1010106842	3300005530	Corn Rhizosphere	MTRLLRLLAGTTMLGALAACGLIGGRPAERDVTIDLPISRSAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREDAGK*
Ga0070672_1009852791	3300005543	Miscanthus Rhizosphere	WGQSKWGQSKWGQSKWGQSKWVRTCWQSSCAFDGAMTRLAHLLASAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSHVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070672_1018847101	3300005543	Miscanthus Rhizosphere	RVHAGHSATMIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0070686_1011240331	3300005544	Switchgrass Rhizosphere	SCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0070664_1021980192	3300005564	Corn Rhizosphere	LAVLPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS*
Ga0068854_1007061111	3300005578	Corn Rhizosphere	VLADFMRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREDAGK*
Ga0068856_1026490221	3300005614	Corn Rhizosphere	MTRPLRLLAAAAMLGTLPACGLIGGRPAEHDVAIDLPMSRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP*
Ga0068852_1005603772	3300005616	Corn Rhizosphere	MTRLTRLLIGSVTLAALSACGLIAGRPAERDVTIDLPVPRAEAVRRVTSAFREQGYVVRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSARVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP*
Ga0068852_1019927852	3300005616	Corn Rhizosphere	MRVVAAMTRLARMVAGAAMLAVLPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS*
Ga0068861_1010938221	3300005719	Switchgrass Rhizosphere	AVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0068851_100134701	3300005834	Corn Rhizosphere	MIRRARLLITTGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE
Ga0066652_1000009527	3300006046	Soil	MIRHPRAVLALALLGSLAGCGLFRGTPEERSVTIDLAVSRSEAVRRTLTTFREEGYAVRATLTSGSQPETEPFKQGDAEAVFRATISGSAATSRVVLAGTYRRKQLGGIVQSGEHEVRNSDDPIERALWSRLQQIALAIRHP*
Ga0068871_1016521331	3300006358	Miscanthus Rhizosphere	VRTCWQSSCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRATAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP*
Ga0068865_1003082421	3300006881	Miscanthus Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALW
Ga0079219_113889781	3300006954	Agricultural Soil	IGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIRTE
Ga0105243_101929612	3300009148	Miscanthus Rhizosphere	MTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0105241_126361641	3300009174	Corn Rhizosphere	LIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIRE
Ga0105248_101010292	3300009177	Switchgrass Rhizosphere	MTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRATAVLRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0126314_107750022	3300010042	Serpentine Soil	GLFRGAPEARSLVTDLPVSRSEAVRRTLTAFREQGYTVRASLTSGLNPETEPFRQGDAEAVFRAEISGSGGTSRVVLSGTYHTSGLGGIVRSGEHEVRNSDETIERALWSRLEQLRLTIRQP*
Ga0105239_122704581	3300010375	Corn Rhizosphere	TLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0134124_106007592	3300010397	Terrestrial Soil	MRLRAPLAAIVCSVVLTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP*
Ga0150984_1222674171	3300012469	Avena Fatua Rhizosphere	MTRHLRFLAGATMLAALPACGLFRGAAEERDVTIDLPVSRSEAVRRTLAVFREEGYVIRATLTSGTQPETEPFKQGDAQAVFRASISGSGATSRVVLSGTYHTKQFGGIVKSGEHDVRNSDDPIERVLWNRLQQLRLGIRERG
Ga0164298_103034371	3300012955	Soil	MTGAAILTSLAGCGLIGGMPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0164302_102531882	3300012961	Soil	MTGAAILTSLAGCGLLGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0134087_106023441	3300012977	Grasslands Soil	MMRALTLAGAIACGAALSACGLIRGGPEERDVTIDLPVSRAAAVRRVTTAFRDEGYVIRNTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVLLSGTYHTKQFGGIVKSGEHEVRNSDDPIERALWTRLQQLRLAIRGEG*
Ga0164308_100810452	3300012985	Soil	MTGAAILTSLAGCGLIGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREP*
Ga0164304_100947531	3300012986	Soil	GMPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0164307_103519361	3300012987	Soil	MTGAAILTSLAGCGLIGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDHPTERALWNRLQQLRLAIREP*
Ga0164306_100711742	3300012988	Soil	RAKLRVSTVAIACFAAVTGCGLFRGAPEERNVTIDLPASRSEAVRRTLTAFREEGYVVRTTLTSGTKPETEPFKQGDAEAVFRAEITGSGNSSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0164305_100491794	3300012989	Soil	MNRLAQLMTGAAILTSLAGCGLIGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0157373_102684172	3300013100	Corn Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVILSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0157371_110692281	3300013102	Corn Rhizosphere	LGVLPACGLIGGRPAERDVTLDLPVSRAEAVRRVTSAFREQGYVIRNTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSSEHEVRNTDDTTERALWNRLQQLRLAIREQ*
Ga0157378_103552121	3300013297	Miscanthus Rhizosphere	ERDVAIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0157378_132789351	3300013297	Miscanthus Rhizosphere	AERDVTIDLPVSRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP*
Ga0163162_123002231	3300013306	Switchgrass Rhizosphere	EARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP*
Ga0163162_129265881	3300013306	Switchgrass Rhizosphere	EARDVTIDLPISRSAAVRRVTAVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE*
Ga0157372_104347452	3300013307	Corn Rhizosphere	MTRLFQRLIITAMLAALPACGLVGGRPAERDVTVNLPVSRSDAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSSEHEVRNTDDPTERALWNRLQQLRLAIREQ*
Ga0157372_122504872	3300013307	Corn Rhizosphere	CGLIGGRPAERDVTIDLPISRSAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREDAGKK*
Ga0157375_107243732	3300013308	Miscanthus Rhizosphere	VSLPACGLFRGAAEARDVTIDLPVSRATAVRRVTSAFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0182007_103150451	3300015262	Rhizosphere	TARVLVLASLGAVSGCGLIGGSPAARSLSIDLPVTRSEAVRRTLTAFREQGYTLRASLTSGLNPETEPFRQNDAQAVFRAEISGSGSRSRVVLSGTYHTRQLGGIVRSGEHEVRNSDDPHERALWSRLDQLRLAIRLP*
Ga0132258_104520053	3300015371	Arabidopsis Rhizosphere	MLRSTRATALAPRSLAAAIACSAMLSACGLIGGRPAERDVTLDLPVPRAEAVRRVTSAFREQGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLTIRER*
Ga0132258_105231801	3300015371	Arabidopsis Rhizosphere	MRVPTLAIACSAALAGCGLFRGAEERNVTVDLPVSRSVAVRRTLTAFREEGYVVRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDETERKLWNRLQQLRLAIRMRD*
Ga0132258_116404202	3300015371	Arabidopsis Rhizosphere	MTRLAQLLTGATMLATLTGCGLIGGKPAERDVTIDLPVSRSTAVRRVRSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ*
Ga0163161_100817522	3300017792	Switchgrass Rhizosphere	MRLRAPLAAIVCSVVLTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP
Ga0190274_110695541	3300018476	Soil	VAALAVLGVLAGCGLFRGTPEERDITIDLTVSRSEAVRRTLAAFREQGYPIRATLTSGTQPETEPFKQGEAEAVFRATVSGSARTSRVVLAGTYRRPQLGGIVQGGEHEVRNSDDPIERALWSRLQQIGLTIRQP
Ga0182009_102723652	3300021445	Soil	MTRLLHLLFGAAMLGVLPACGLIGGRPAERDVTLDLPVSRAEAVRRVTSAFREQGYVIRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSSRVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP
Ga0222622_110636211	3300022756	Groundwater Sediment	RRPRKSLYLKNTRAYQVSDSDGRLHAPRSGSMTRLLRFLAGVTMLAVLPACGLFRGAAEERDVTIDLPVSRSEAVRRTLAVFREEGYVIRATLTSGTQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLGLRERG
Ga0207645_100681962	3300025907	Miscanthus Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS
Ga0207645_109297741	3300025907	Miscanthus Rhizosphere	MRLRAPLAAIVCSVVLTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERVLWNRLQQLRLGIRERG
Ga0207705_102541592	3300025909	Corn Rhizosphere	MRVRSAMMTRFARLLATVTTLAALTGCGLLGGRPAERDVTIDLPVSRATAIRRVTSAFRDEGYVIRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSARVVLSGTYHTKQFGGIVKSGEKEVRNTDDPTERALWNRLQQLRLAIREP
Ga0207705_108755161	3300025909	Corn Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE
Ga0207657_101365172	3300025919	Corn Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE
Ga0207657_110492011	3300025919	Corn Rhizosphere	MLGALAACGLIGGRPAERDVTIDLPISRSAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALW
Ga0207649_106483141	3300025920	Corn Rhizosphere	LTGCGLLGGRPAERDVTIDLPVSRATAIRRVTSAFRDEGYVIRNTLTSGTKPETEPFRQGDAEAVFRAEISGSGSSARVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIRER
Ga0207652_105271372	3300025921	Corn Rhizosphere	MLGALAACGLIGGRPAERDVTIDLPISRSAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEVTGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREDAGK
Ga0207681_111396471	3300025923	Switchgrass Rhizosphere	VLADFMRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVISGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207701_101180112	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207644_115425961	3300025931	Switchgrass Rhizosphere	MLGTLPACGLIGGRPAERDVTIDLPVSRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTR
Ga0207706_101908252	3300025933	Corn Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207709_100628762	3300025935	Miscanthus Rhizosphere	MLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207691_100806513	3300025940	Miscanthus Rhizosphere	MRLRAPLAAIVCSVALTGCGLFRGAAEARDVTIDLPISRSSAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSHVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWNRLQQLRLAIREP
Ga0207691_101614392	3300025940	Miscanthus Rhizosphere	MTRLAHLLASAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSHVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207691_114414041	3300025940	Miscanthus Rhizosphere	LADFMRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS
Ga0207711_110562111	3300025941	Switchgrass Rhizosphere	AAEARDVTIDLPISRSSAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSHVVLSGTYHTKQFGGIVKSDEHDVRNSDDPTERALWTRLQQLRLAIREP
Ga0207711_117474561	3300025941	Switchgrass Rhizosphere	KWGQSKWGQSKWGQSKWVRTCWQSSCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207679_105331931	3300025945	Corn Rhizosphere	AAMLAVLPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIRER
Ga0207651_110892971	3300025960	Switchgrass Rhizosphere	GAAILTSLAGCGLIGGRPAERDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSHVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207668_100411323	3300025972	Switchgrass Rhizosphere	GQSQWGQSQWGQSQWGQSQWVRTCWQSSCAFDGAMTRLAHLLAGAVVLVSLPACGLFRGAAEARDVTIDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207668_107907231	3300025972	Switchgrass Rhizosphere	VLADFMRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERVLWNRLQQLRLAIRMGS
Ga0207640_108090731	3300025981	Corn Rhizosphere	VLADFMRVVAAMTRLARMVAGAAMLAALPACGLFRGAAEARNVTIDLPISRSEAVRRTLAVFREEGYVIRSTLTSGSQPETEPFKQGDAEAVFRASISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWKRLQQLR
Ga0207677_106971781	3300026023	Miscanthus Rhizosphere	MRLRAPLAAIVCSVVLTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIREQ
Ga0207703_107917511	3300026035	Switchgrass Rhizosphere	MRLRAPLAAILCSVGLVGCGLRGAAAERDVAIDLPVSRSAAVRRVTSVFRDEGYIIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQVRLAIREQ
Ga0207641_103366352	3300026088	Switchgrass Rhizosphere	MIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERAQFRNAMTA
Ga0207674_120015251	3300026116	Corn Rhizosphere	RHQRSSLAGFLRVSAPMRLRAVLPTIACSATLVGCGLFRGAPEERNVTVDLPVSRSAAVRRVTSAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEVTGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIRER
Ga0207698_112995871	3300026142	Corn Rhizosphere	SATMIRRARLLIATGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNASRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE
Ga0307297_102805672	3300028754	Soil	TPEARDITIDLTVSRSEAVRRTLAAFREQGYPIRATLTSGTQPETEPFKQGDAEAVFRATVSGSARTSRVVLAGTYRRAQLGGIVQGGVHEVRNSDDPIERALWSRLQQIGLTIRQP
Ga0268240_100010125	3300030496	Soil	MHRTRVLVLASLGALSGCGLIGGSPAARSLTIDLPVTRSEAVRRTLTAFREQGYTVRASLTSGLNPETEPFRQNDAEAVFRAEVSGSGSRSRVVLSGTYHTRQFGGIARSGEHEVRNGDDPLERALWSRLEQLRLAI
Ga0307506_102633601	3300031366	Soil	PLITRIACGAVLASLSACGLFHGAAEERDVTVDLPVSRSVAVRRTLTAFREEGYVIRATLTSGSKPETEPFRQGDAEAVFRAEVTGAGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNSDDPIERALWTRLQQLRLAIREP
Ga0307408_1022142591	3300031548	Rhizosphere	IGTTLLAALTACGLIGGKPAERDVTIDLPVSRSAAVRRVTSAFREQGYVIRSTLTSGTKPETEPFKQGDAEAVFRAEITGSGSTSRVILSGTYHTKQLGGIVKSGEHEVRNSDDPTERALWNRLQQLRLAIRAQ
Ga0310813_115097271	3300031716	Soil	ATMIRRARLLITTGTLAALPACGLIGGRPAERDVTIDLPVSRAAAIRRVTSAFRDEGYVIRSTLTSGSKPETEPFRQGDAEAVFRAEITGSGNTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPTERALWNRLQQLRLAIRTE
Ga0308175_1001644403	3300031938	Soil	MTRLAHFLIGAAMLGVLPACGLIGGRPAERDVTIDLPVSRSTAVRRVTQAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPIERALWNRLEQLRLAIREP
Ga0308175_1026482401	3300031938	Soil	RLAQLLVGVTMLGALSACGLIGGRPAERDVTIDLPVSRSAAVRRVTQAFRDEGYAIRNTLTSGTKPETEPFRQGDAEAVFRAEITGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDATERALWNRLQQLRLAIRDQ
Ga0308174_100462632	3300031939	Soil	MRLRAPLAAIVCSVALTGCGLFRGAAEARDVTIDLPISRSAAVRRVTSVFREEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEITGSGNTSRVVLTGTYHTKQFGGIVKSGEHDVRNSDDPTERALWNRLQQLRLAIREP
Ga0308176_100090664	3300031996	Soil	MTRLAHFLIGAAMLGVLSACGLIGGRPAERDVTIDLPVSRSTAVRRVTQAFRDEGYVIRSTLTSGTKPETEPFRQGDAEAVFRAEISGSGSTSRVVLSGTYHTKQFGGIVKSGEHEVRNTDDPIERALWNRLEQLRLAIREP
Ga0308173_100517664	3300032074	Soil	MLLLASVATLSGCGLIGGAPAARTLALDLPVSRSEAVRRTLAAFREQGYTVRASLTSGLNPETEPFRQDDAEAVFRAEISGSGNTSRVVLSGSYHTRELAGIVRSGEHEVRNGDDPLERKLWSRLEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097422

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences