Basic Information | |
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Family ID | F097344 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 52 residues |
Representative Sequence | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVRSL |
Number of Associated Samples | 80 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 81.73 % |
% of genes near scaffold ends (potentially truncated) | 27.88 % |
% of genes from short scaffolds (< 2000 bps) | 62.50 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.44 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (88.462 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (21.154 % of family members) |
Environment Ontology (ENVO) | Unclassified (59.615 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (53.846 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.49% β-sheet: 0.00% Coil/Unstructured: 39.51% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Sediment Freshwater Freshwater Freshwater Lake Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater Lake Sediment Freshwater Freshwater Freshwater Surface Ice Aqueous Estuarine Estuarine Sand |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J29032_1087918063 | 3300002408 | Freshwater | MFTILELAMVVIACSAGWFLVGWSIGYKQGVKDGFNR |
B570J40625_1001629471 | 3300002835 | Freshwater | MFTILELAMVVIACSAGWFLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL* |
JGI25908J49247_100089896 | 3300003277 | Freshwater Lake | MFTILELAMVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0079957_10031185 | 3300005805 | Lake | MFTILELAVVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY* |
Ga0073921_10652602 | 3300005990 | Sand | MFTILELAAVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0070744_100271871 | 3300006484 | Estuarine | MFTILELAIISIVMSFAWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0070749_100272395 | 3300006802 | Aqueous | MFTVVELAGAVILASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS* |
Ga0075464_100163116 | 3300006805 | Aqueous | MFTILELAAVVIACSVGWFLVGWTIGYKQGVKDGWQRGRAAGLRWATDRVRNS* |
Ga0075464_100427475 | 3300006805 | Aqueous | MISIEKMLVLLLVSNVGWLLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0075464_101600992 | 3300006805 | Aqueous | MFTVLEMAAVALLCSVGWFLVGWSIGFKEGVKEGFNRGRAAGIRAATDRVRSF* |
Ga0075464_102386763 | 3300006805 | Aqueous | TRERISRSPESGANMFTVLELAAVVIVASIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERIKSY* |
Ga0075473_103230922 | 3300006875 | Aqueous | MFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGR |
Ga0075458_100718113 | 3300007363 | Aqueous | MFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY* |
Ga0114351_10411143 | 3300008117 | Freshwater, Plankton | MFTVLEMAGAVFLASVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY* |
Ga0114363_10365737 | 3300008266 | Freshwater, Plankton | SGANMFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY* |
Ga0114363_11288821 | 3300008266 | Freshwater, Plankton | MFTILEMAIAVFIASIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY* |
Ga0114880_10409866 | 3300008450 | Freshwater Lake | LEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY* |
Ga0114880_10994761 | 3300008450 | Freshwater Lake | MFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRSAGLRAATNYVKSL* |
Ga0114880_11715872 | 3300008450 | Freshwater Lake | PESGANMFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY* |
Ga0102816_10035267 | 3300008999 | Estuarine | MFTILELAMVVIACSAAWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0114973_100068188 | 3300009068 | Freshwater Lake | MFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0114973_105358091 | 3300009068 | Freshwater Lake | MISIEKVLLVVIVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0105098_1000044115 | 3300009081 | Freshwater Sediment | MFTILELAVVVVATSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATNYVKSL* |
Ga0105098_102865371 | 3300009081 | Freshwater Sediment | SRFLESGAKMFTVVELAGAVILASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS* |
Ga0105103_100939205 | 3300009085 | Freshwater Sediment | MFTILELAVVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAAT |
Ga0105103_108964812 | 3300009085 | Freshwater Sediment | MFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATNYVKSL* |
Ga0114968_100519831 | 3300009155 | Freshwater Lake | MFTVLELAGAVILASIVWFIVGWSIGFKEGVKDGFNRGRAAGLRAATEIVRNS* |
Ga0114968_100566991 | 3300009155 | Freshwater Lake | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVKSL* |
Ga0114968_100766245 | 3300009155 | Freshwater Lake | MFTVVELAGAVILASVGWFLVGWSVGYKQGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0114977_100078848 | 3300009158 | Freshwater Lake | MISIEKVLLVVIVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVKNS* |
Ga0114978_101576302 | 3300009159 | Freshwater Lake | MFTVLEMAGAVLLASVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATDRVRSY* |
Ga0114979_1000676110 | 3300009180 | Freshwater Lake | MISIEKVLLIVLVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0114974_101461173 | 3300009183 | Freshwater Lake | MFTVLELAGAVIFASIGWFMVGWSIGFKEGVKDGFNRGRAAGLRAATEIVRNS* |
Ga0114974_102068183 | 3300009183 | Freshwater Lake | MFTVLELAGAVILASIGWFLVGWSVGSKSGFKDGYMRGRANAMRDATNRVRNS* |
Ga0114971_101393053 | 3300009185 | Freshwater Lake | SHPESGAKMFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0114972_103364951 | 3300009187 | Freshwater Lake | VLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0133913_115907311 | 3300010885 | Freshwater Lake | MFTVLELAAVVIVASVGWFLVGWTIGFKEGVKDGFNRGRAAGLRAATNYVKSL* |
Ga0151514_106475 | 3300011115 | Freshwater | MFTILELAAVVIVASIGWFLVGWTIGFKQGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0153698_113527 | 3300011335 | Freshwater | MFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRAATNYVKSL* |
Ga0153805_10505181 | 3300012013 | Surface Ice | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVRSL* |
Ga0157203_10061964 | 3300012663 | Freshwater | MFTILELAMVVIACSAGWFLVGWSIGFKEGVKDGFNRGRAAGLRAATEIVRNS* |
Ga0157210_10286701 | 3300012665 | Freshwater | MFTILEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY* |
Ga0164292_103107721 | 3300013005 | Freshwater | MFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGL |
Ga0164292_103416123 | 3300013005 | Freshwater | SHPESGAKMFTVLELAGAVILASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS* |
Ga0164294_1000331912 | 3300013006 | Freshwater | MFTVVEMAGAVFLASVGWFLVGWSIGYKQGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0164295_103589483 | 3300013014 | Freshwater | MFTVLEMAGTVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRWATDRVRNS* |
Ga0181362_10646394 | 3300017723 | Freshwater Lake | MFTILELSLVVIACSVGWFLVGWSMGYKEGVKDGFNRGRAAGMRAATDYVRSL |
Ga0181365_10385291 | 3300017736 | Freshwater Lake | LAMVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0181348_13035002 | 3300017784 | Freshwater Lake | MFTILELALVVIGCSVGWFIVGWSIGYKEGVKDGFNRGRAAGMRAATDYVRSL |
Ga0181359_11386192 | 3300019784 | Freshwater Lake | MFTILELAMVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGLRAATDYVRSL |
Ga0181359_11581132 | 3300019784 | Freshwater Lake | MFTILELAMVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0211729_101571733 | 3300020172 | Freshwater | MFTILELAAVVIACSVGWFLVGWTIGFKEGVKDGFNRGRAAGLRAATE |
Ga0211731_105271063 | 3300020205 | Freshwater | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVRSL |
Ga0211731_107946052 | 3300020205 | Freshwater | MFTVLELAGAVILASIGWFMVGWSIGFKEGVKDGFNRGRAAGLRAATEIVRNS |
Ga0211731_111005684 | 3300020205 | Freshwater | MFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRAATEIVRNS |
Ga0208854_10168371 | 3300020517 | Freshwater | MFTILELAMVVIACSAGWFLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0214162_10007358 | 3300021108 | Freshwater | MFTILELAAVVIACSAGWFLVGWSIGYKQGVKDGFNRGRAAGLRAATDYVRSL |
Ga0214163_10103485 | 3300021141 | Freshwater | MFTVLELLVVVIIASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS |
Ga0244775_100055923 | 3300024346 | Estuarine | MFTILELAAVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0208303_10944141 | 3300025543 | Aqueous | MFTVVELAGAVILASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS |
Ga0208916_100008285 | 3300025896 | Aqueous | MFTILELAAVVIACSVGWFLVGWTIGYKQGVKDGWQRGRAAGLRWATDRVRNS |
Ga0208916_100232664 | 3300025896 | Aqueous | MISIEKMLVLVLVSNVGWLLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVRSL |
Ga0255074_10386492 | 3300027121 | Freshwater | MFTILELAIISIVMSFAWCLVGWSIGYKQGVKDGWQRGRAAGLRWATDRVRNS |
Ga0255064_10246542 | 3300027138 | Freshwater | LELAMVVIACSAGWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0255078_10416401 | 3300027156 | Freshwater | MFTILELAMVVIACSAGWCLVGWSIGYKQGVKDGWQRGRAAGLRWATDRVRNS |
Ga0255084_10914662 | 3300027488 | Freshwater | ILELAMVVIACSAGWCLVGWSIGYKQGVKDGWQRGRAAGLRWATDRVRNS |
Ga0209392_100014516 | 3300027683 | Freshwater Sediment | MFTILELAVVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY |
Ga0209704_10297543 | 3300027693 | Freshwater Sediment | MFTILELAVVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0209297_10636275 | 3300027733 | Freshwater Lake | MISIEKVLLVVIVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVKNS |
Ga0209190_10288636 | 3300027736 | Freshwater Lake | MFTVLELAGAVILASIGWFLVGWSIGFKEGVKDGFNRGRAAGLRWATDRVRNS |
Ga0209596_10078083 | 3300027754 | Freshwater Lake | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATDYVKSL |
Ga0209596_11371033 | 3300027754 | Freshwater Lake | SGANMFTVVELAGAVILASVGWFLVGWSVGYKQGVKDGFNRGRAAGLRWATDRVRNS |
Ga0209296_10048766 | 3300027759 | Freshwater Lake | MISIEKVLLVVIVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVRNS |
Ga0209088_101034491 | 3300027763 | Freshwater Lake | MISIEKVLLIVLVSNVGWLLVGWSMGFKQGVKDGFNRGRAAGLRWATDRVRNS |
Ga0209820_10233525 | 3300027956 | Freshwater Sediment | MFTILELAVVVVATSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATNY |
Ga0209400_10532192 | 3300027963 | Freshwater Lake | MFTVVELAGAVILASVGWFLVGWSVGYKQGVKDGFNRGRAAGLRWATDRVRNS |
(restricted) Ga0247844_10370034 | 3300028571 | Freshwater | MFTILELAAVVIATSIGWFLVGWSIGFKAGIKDGYNRGRAAGLRWATDRVRNS |
Ga0315907_102739833 | 3300031758 | Freshwater | MFTVLEMAGAVFLASVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY |
Ga0315288_106640983 | 3300031772 | Sediment | MFTILELAAVVIACSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATEIVRNS |
Ga0315290_109347411 | 3300031834 | Sediment | MFTILELALVVIACSVAWCLVGWTIGYKEGVKDGFNRGRAAGMRAATEIVRNS |
Ga0315278_102967332 | 3300031997 | Sediment | MFTILELALVVIACSIAWCLVGWTIGYKEGVKDGFNRGRAAGMRAATEIVRNS |
Ga0315274_101588172 | 3300031999 | Sediment | MFTILELALVVIACSVAWCLVGWSIGYKQGVKEGFIRGRSAGLRWATDRVRNS |
Ga0315289_108940592 | 3300032046 | Sediment | MFTILELAAVVIASSVGWFLVGWTIGYKEGVKDGFNRGRAAGMRAATEIVRNS |
Ga0315906_102020311 | 3300032050 | Freshwater | HPESGANMFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0315903_102039136 | 3300032116 | Freshwater | MFTVLEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATE |
Ga0315903_102171951 | 3300032116 | Freshwater | LEMAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0315276_122776292 | 3300032177 | Sediment | GANKSHPESGAKMFTILELAMVVIVCSVAWCLVGWSIGYKQGVKEGFIRGRSAGLRWATDRVRNS |
Ga0334979_0053545_711_872 | 3300033996 | Freshwater | MFTILELAAVVIACSAGWFLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0334986_0040357_355_516 | 3300034012 | Freshwater | MFTVLEMAGAVLLASVGWFLVGWTVGFKEGVKDGFNRGRAAGMRAATDYVRSL |
Ga0334987_0003987_4280_4441 | 3300034061 | Freshwater | MFTILELAAVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0334995_0035409_2_139 | 3300034062 | Freshwater | MFTVVELLVVVIIASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWA |
Ga0334995_0519587_377_538 | 3300034062 | Freshwater | MFTILELAAVVIATSIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0335019_0584016_234_395 | 3300034066 | Freshwater | MFTILELSAVVIATSIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY |
Ga0334990_0644717_2_133 | 3300034068 | Freshwater | MFTILELAAVVIATSVGWFLVGWTIGYKEGVKDGFNRGRAAGLR |
Ga0335031_0806183_3_149 | 3300034104 | Freshwater | ELAAVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0335036_0058621_2364_2525 | 3300034106 | Freshwater | MFTVLEMAGAVFLASVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0335036_0141731_131_292 | 3300034106 | Freshwater | MFTVLELAGAVILASVGWCLVGWSIGFKAGMKDGYNRGRAAGLRWATDRVRNS |
Ga0335036_0255281_193_354 | 3300034106 | Freshwater | MFTILELAMVVIACSVVWCLVGWSIGYKQGVKDGFNRGRAAGMRAATDYVRSL |
Ga0335036_0326280_115_276 | 3300034106 | Freshwater | MFTVVEMAGAVILASVGWCLVGWSIGYKAGMKDGYNRGRAAGLRWATDRVRNS |
Ga0335036_0575002_542_685 | 3300034106 | Freshwater | MAIAVFIAGIGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERVRSY |
Ga0335060_0099768_1606_1752 | 3300034122 | Freshwater | EMAGAVLLASVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATERLRSY |
Ga0335017_0173832_891_1052 | 3300034167 | Freshwater | MFTVVEMAGAVILASVGWCLVGWSMGYKVGLKDGFNRGRAAGLRWATDRVRNS |
Ga0335007_0002767_9745_9906 | 3300034283 | Freshwater | MFTILELAVVVVACSVGWFLVGWTIGYKEGVKDGFNRGRAAGLRAATDRVRSY |
Ga0335039_0317807_1_135 | 3300034355 | Freshwater | MFTVVEMAGAVILASVGWCLVGWSMGYKVGLKDGFNRGRAAGLRW |
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