Basic Information | |
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Family ID | F097318 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 58 residues |
Representative Sequence | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Number of Associated Samples | 73 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 69.23 % |
% of genes near scaffold ends (potentially truncated) | 25.00 % |
% of genes from short scaffolds (< 2000 bps) | 65.38 % |
Associated GOLD sequencing projects | 64 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (48.077 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic (25.961 % of family members) |
Environment Ontology (ENVO) | Unclassified (54.808 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (59.615 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 37.93% β-sheet: 6.90% Coil/Unstructured: 55.17% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Lake Freshwater Lentic Freshwater And Sediment Freshwater Freshwater, Plankton Anoxic Zone Freshwater Freshwater Lake Freshwater Lake Sediment Marine Plankton Freshwater Freshwater Deep Subsurface Estuarine Marine Marine Estuarine Sand Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
BS_KBA_SWE12_21mDRAFT_100031903 | 3300000124 | Marine | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHKS* |
BS_KBA_SWE12_21mDRAFT_100147811 | 3300000124 | Marine | TRRVNTLEHYIEYKQYDSIKVMNALQLNGVISDECIMPEDVTDSGKAVYWLEDHVAEIH* |
JGI12421J11937_101113603 | 3300000756 | Freshwater And Sediment | VCCIRWHERVRRVNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHTS* |
BS_KBA_SWE02_21mDRAFT_100221794 | 3300000792 | Marine | MSNTRTPSNTRRVNTLEHYIEYKQYDSIKVMNALQLNGVISDECIMPEDVTDSGKAVYWLEDHVAEIH* |
RCM35_10706404 | 3300001844 | Marine Plankton | MNTLEHYIRVKKLNPTNVMNNLQDNGIISDECINPWDVFDSGKSVSWLEKMDVI |
Ga0049083_100233673 | 3300005580 | Freshwater Lentic | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEVHRS* |
Ga0049081_100174872 | 3300005581 | Freshwater Lentic | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS* |
Ga0049081_100257822 | 3300005581 | Freshwater Lentic | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHTS* |
Ga0049081_100297983 | 3300005581 | Freshwater Lentic | MNTLEHYIEYKRLNPVKVMNALQNNGIISDEAIFPDDVRDSGQAVYWLEDHLFDI* |
Ga0049081_100340764 | 3300005581 | Freshwater Lentic | MRGEHFQNNFRRPMNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI* |
Ga0049081_100509867 | 3300005581 | Freshwater Lentic | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEINKA* |
Ga0049081_100593684 | 3300005581 | Freshwater Lentic | VNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS* |
Ga0049081_100891554 | 3300005581 | Freshwater Lentic | RMNTLEHYIEYKILNATKVMNALQLHGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS* |
Ga0049081_101335522 | 3300005581 | Freshwater Lentic | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHIGEVHKS* |
Ga0049081_101595522 | 3300005581 | Freshwater Lentic | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS* |
Ga0049081_101644942 | 3300005581 | Freshwater Lentic | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS* |
Ga0049081_102952852 | 3300005581 | Freshwater Lentic | MNTLEHYIEYKRLNPVRVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI* |
Ga0049080_101887111 | 3300005582 | Freshwater Lentic | MNTLEHYIEYKILNATKVMNALQLHGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS* |
Ga0049080_102824081 | 3300005582 | Freshwater Lentic | RVNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHTS* |
Ga0079957_10089988 | 3300005805 | Lake | MNTLEHYIQHKKLDAIKAMNALQLNGVISDECVFPEDVRDSGKAVYWLEDHMDEVNSY* |
Ga0070743_101388581 | 3300005941 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEINRS* |
Ga0070743_102260551 | 3300005941 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHIGEINRS* |
Ga0070742_100122335 | 3300005942 | Estuarine | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEINKL* |
Ga0073921_10279413 | 3300005990 | Sand | MNTLEHYIEHKRLNATKVMNALQLHGIISDECIFPDEVRDSGQAVYWLEDHMGEVHRS* |
Ga0070744_101299612 | 3300006484 | Estuarine | MNTLEHYIEYKRLNETKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS* |
Ga0102874_11457221 | 3300007546 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIVSDECIFPDDVRDSGQAVYWLEDHMGEINRS* |
Ga0102877_10140008 | 3300007548 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS* |
Ga0102900_10673922 | 3300007651 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGVISDECIFPDDVRDSGQAVYWLEDHMGEINRS* |
Ga0102898_11036702 | 3300007658 | Estuarine | MNTLEHYIEYKRLNATKVTNALQQNGIISDECIFPDDVRDSGQAVYWL |
Ga0102898_11350231 | 3300007658 | Estuarine | MNTLEHYIEHKRLNATKVMNALQLHGIISDECIFPEDVRDSGQAVYWLEDHMGEINRS* |
Ga0114343_100909010 | 3300008110 | Freshwater, Plankton | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINKA* |
Ga0114841_10862315 | 3300008259 | Freshwater, Plankton | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEINKA* |
Ga0114336_11043702 | 3300008261 | Freshwater, Plankton | MNTLEHYIEYKRLNATKVMNALQLNGIVSDECIFPEDVRDSGQAVYWLEDHMGEINRS* |
Ga0102831_10049566 | 3300008996 | Estuarine | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEYHMGEVHK* |
Ga0102831_10144152 | 3300008996 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLHGIISDECIFPEDVRDSGQAVYWLEDHMGEINKL* |
Ga0114918_100569934 | 3300009149 | Deep Subsurface | VNTLEHYIEYKQYDSIKVMNALQLNGVISDECIMPEDVTDSGKAVYWLEDHVAEIH* |
Ga0114966_100232279 | 3300009161 | Freshwater Lake | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQSVYWLEDHMGEVHTS* |
Ga0114975_100846794 | 3300009164 | Freshwater Lake | LNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS* |
Ga0114974_106159301 | 3300009183 | Freshwater Lake | KKLNAKKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS* |
Ga0114971_100063256 | 3300009185 | Freshwater Lake | VNTLEHYIQYKKLNATKVMNALQLHGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS* |
Ga0114958_101138653 | 3300009684 | Freshwater Lake | MNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFANDVIDSGQAVYWLEDHLFDI* |
Ga0133913_122711502 | 3300010885 | Freshwater Lake | VNTLEHYIQHKKLNATKVMNALQLHGIISDECIFPDDVRDSGQAVYWLEDHMVEIHRL* |
Ga0153702_15927 | 3300011337 | Freshwater | MNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFPEDVRDSGQAVYWLEDHLFDI* |
Ga0153699_13138 | 3300011338 | Freshwater | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEVHK* |
Ga0119955_11484072 | 3300012006 | Freshwater | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEVHTL* |
Ga0177922_100686402 | 3300013372 | Freshwater | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEINKI* |
Ga0177922_105568581 | 3300013372 | Freshwater | RLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEVHKS* |
Ga0181350_10252461 | 3300017716 | Freshwater Lake | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEVHRS |
Ga0181352_10088597 | 3300017747 | Freshwater Lake | MNTLEHYIEYKRLNATKVMNALQLNGIVSDECIFPDEVRDSGQAVYWLEDHMGEI |
Ga0181346_10912482 | 3300017780 | Freshwater Lake | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS |
Ga0181346_12453492 | 3300017780 | Freshwater Lake | RRMNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEVHRS |
Ga0181348_12587611 | 3300017784 | Freshwater Lake | VNTLEHYIEHKKLNATKVMNALQLNGIISDECIFAEDVKDSGKAVYWLEDHMDEVNSY |
Ga0181355_11957243 | 3300017785 | Freshwater Lake | EHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEVHRS |
Ga0194050_11997343 | 3300020155 | Anoxic Zone Freshwater | LEHYIEYKRLNPVKVMNALQNNGVISDECIFADDVRDSGQAVYWLEDHLK |
Ga0194049_11647441 | 3300020157 | Anoxic Zone Freshwater | EHFQDNFRRPMNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFANDVRDSGQAVYWLEDHLFDI |
Ga0207938_10533012 | 3300020525 | Freshwater | VNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0208718_10068575 | 3300020565 | Freshwater | MNTLEHYIEYKRLNPVRVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI |
Ga0210301_11301891 | 3300021325 | Estuarine | KRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHIGEINRS |
Ga0194061_10631934 | 3300021601 | Anoxic Zone Freshwater | YIEYKRLNSVKVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI |
Ga0214921_1001602311 | 3300023174 | Freshwater | MNTLEHYIRVENLCWIKTMNTLQNYGVISDECVEPRDVRDAGKAVAWLSMNMNKYE |
Ga0214919_100681324 | 3300023184 | Freshwater | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEVHTL |
Ga0244777_100032877 | 3300024343 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Ga0244775_1000216733 | 3300024346 | Estuarine | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEYHMGEVHK |
Ga0244775_107854871 | 3300024346 | Estuarine | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Ga0208165_10633091 | 3300027218 | Estuarine | IEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Ga0208442_10271815 | 3300027229 | Estuarine | YKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Ga0208807_10232423 | 3300027239 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINR |
Ga0208974_10075695 | 3300027608 | Freshwater Lentic | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHIGEVHKS |
Ga0208974_10134204 | 3300027608 | Freshwater Lentic | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEVHLS |
Ga0208974_10337576 | 3300027608 | Freshwater Lentic | RGEHFQNNFRRPMNTLEHYIEYKRLNPVRVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI |
Ga0208974_10589622 | 3300027608 | Freshwater Lentic | MRGEHFQNNFRRPMNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI |
Ga0208974_11327642 | 3300027608 | Freshwater Lentic | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHTS |
Ga0208974_11553742 | 3300027608 | Freshwater Lentic | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWL |
Ga0208951_10499262 | 3300027621 | Freshwater Lentic | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEVHRS |
Ga0208133_11075922 | 3300027631 | Estuarine | MNTLEHYIEYKRLNETKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0208975_10193345 | 3300027659 | Freshwater Lentic | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS |
Ga0208975_10353152 | 3300027659 | Freshwater Lentic | MCGEHFQNNFRRKMNTLEHYIEYKRLNPVKVMNALQNNGIISDEAIFPDDVRDSGQAVYWLEDHLFDI |
Ga0208975_10618163 | 3300027659 | Freshwater Lentic | MRGEHFQNNFRRPMNTLEHYIEYKRLNPVRVMNALQNNGIISDECIFPDDVRDSGQAVYWLEDHLFDI |
Ga0208975_10901101 | 3300027659 | Freshwater Lentic | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0208975_11080021 | 3300027659 | Freshwater Lentic | VNTLEHYIEYKKLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0208975_11374791 | 3300027659 | Freshwater Lentic | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEINKA |
Ga0209499_10827362 | 3300027712 | Freshwater Lake | MRGEHFQDNFRRPMNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFANDVIDSGQAVYWLEDHLFDI |
Ga0208305_100084126 | 3300027753 | Estuarine | MNTLEHYIEYKRLNATKVMNALQLHGIISDECIFPEDVRDSGQAVYWLEDHMGEINKL |
Ga0209296_10843793 | 3300027759 | Freshwater Lake | VNTLEHYIQHKKLNATKVMNALQLHGIISDECIFPDDVRDSGQAVYWLEDHMVEIHRL |
Ga0209086_100327832 | 3300027770 | Freshwater Lake | VNTLEHYIQYKKLNATKVMNALQLNGIISDECIFPEDVRDSGQSVYWLEDHMGEVHTS |
Ga0209354_100315755 | 3300027808 | Freshwater Lake | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHKS |
Ga0209354_104207292 | 3300027808 | Freshwater Lake | VNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0307377_111034912 | 3300031673 | Soil | TRDKRKSMRGEHFQHNFRKTMNTLEHYIEYKRLNPVKVMNALQNNGIISDECIFPEDVRDSGQAVYWLEDHLFDI |
Ga0315291_106136213 | 3300031707 | Sediment | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHRS |
Ga0315290_112790792 | 3300031834 | Sediment | VNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQSVYWLEDHMGEINRS |
Ga0315909_100801572 | 3300031857 | Freshwater | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPEDVRDSGQAVYWLEDHMGEINKA |
Ga0315285_107044882 | 3300031885 | Sediment | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINKS |
Ga0315294_102961593 | 3300031952 | Sediment | EHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINKS |
Ga0315294_110415731 | 3300031952 | Sediment | HYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0315274_103061314 | 3300031999 | Sediment | MNTLEHYIEYKRLNPVRLMNALQNNGIISDECIFPDEVRDSGQAVYWLEDHIGEIHLS |
Ga0315289_102068155 | 3300032046 | Sediment | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHIGEIHLS |
Ga0315275_103560934 | 3300032401 | Sediment | MNTLEHYIEHKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEINRS |
Ga0315273_113520753 | 3300032516 | Sediment | MNTLEHYIEYKRLNATKVMNALQLNGIISDECIFPDEVRDSGQAVYWLEDHMGEIN |
Ga0334990_0005114_6147_6323 | 3300034068 | Freshwater | MNTLEHYIEYKRLNATKVMNALQLNGIVSDECIFPDDVRDSGQAVYWLEDHIGEINRS |
Ga0334990_0470808_310_486 | 3300034068 | Freshwater | VNTLEHYILYKKLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEIHRS |
Ga0335022_0010112_3713_3889 | 3300034095 | Freshwater | MNTLEHYIEYKRLNAIKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEINRS |
Ga0335035_0510678_2_214 | 3300034105 | Freshwater | VCCIRWNERVRRVNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHTS |
Ga0335033_0056136_1059_1235 | 3300034117 | Freshwater | MNTLEHYIQYKRLNATKVMNALQLNGIISDECIFPDDVRDSGQAVYWLEDHMGEVHKS |
Ga0335007_0268834_966_1136 | 3300034283 | Freshwater | TLEHYIQHKKLDAIKTMNALQLNGVISDECVFPEDVRDSGKAVYWLEDHMDEVNSY |
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