Metagenome / Metatranscriptome Family F097287

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097287
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	119 residues
Representative Sequence	MSTPLADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFL
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.73 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (33.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.29% β-sheet: 2.88% Coil/Unstructured: 56.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02885	Glycos_trans_3N	29.81
PF07831	PYNP_C	6.73
PF01773	Nucleos_tra2_N	0.96
PF07670	Gate	0.96
PF11624	M157	0.96
PF00563	EAL	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0213	Thymidine phosphorylase	Nucleotide transport and metabolism [F]	6.73
COG1972	Nucleoside permease NupC	Nucleotide transport and metabolism [F]	0.96
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.96
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.96
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.96
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.35 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.35 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.77 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.92 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.35 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.92 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.96 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.35 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	1.92 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.96 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.35 %
Desulfurispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfurispora	1.92 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.96 %
Aeromonas salmonicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.35 %
Desulfurispora thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfurispora → Desulfurispora thermophila	1.92 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.96 %
Aeromonas salmonicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	0.96 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0480822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300000956\|JGI10216J12902_100495246	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300000956\|JGI10216J12902_111212667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300004020\|Ga0055440_10086941	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300004156\|Ga0062589_100555107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	984	Open in IMG/M
3300004480\|Ga0062592_100621676	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005176\|Ga0066679_10944302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005179\|Ga0066684_10278503	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005280\|Ga0065696_1235937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005340\|Ga0070689_100188289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1679	Open in IMG/M
3300005353\|Ga0070669_100401909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1121	Open in IMG/M
3300005355\|Ga0070671_100371068	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005355\|Ga0070671_101152180	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005441\|Ga0070700_100007779	All Organisms → cellular organisms → Bacteria	5807	Open in IMG/M
3300005441\|Ga0070700_100486009	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005450\|Ga0066682_10198559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300005455\|Ga0070663_100947656	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005457\|Ga0070662_100200600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1583	Open in IMG/M
3300005540\|Ga0066697_10215091	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300005544\|Ga0070686_100028498	All Organisms → cellular organisms → Bacteria	3387	Open in IMG/M
3300005544\|Ga0070686_101430863	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005545\|Ga0070695_100323646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1147	Open in IMG/M
3300005549\|Ga0070704_101884928	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005719\|Ga0068861_101366792	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005841\|Ga0068863_100140474	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300005843\|Ga0068860_100962632	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005844\|Ga0068862_100716358	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006034\|Ga0066656_10591261	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006046\|Ga0066652_100085384	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300006579\|Ga0074054_11941859	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006797\|Ga0066659_10416062	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006844\|Ga0075428_100572736	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300006844\|Ga0075428_100861151	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006844\|Ga0075428_102435388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas salmonicida	537	Open in IMG/M
3300006847\|Ga0075431_101128171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300006847\|Ga0075431_101304272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300006847\|Ga0075431_102209274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfurispora → Desulfurispora thermophila	505	Open in IMG/M
3300006852\|Ga0075433_11178996	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006854\|Ga0075425_101999724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300006894\|Ga0079215_11148187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfurispora → Desulfurispora thermophila	586	Open in IMG/M
3300006918\|Ga0079216_10284869	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300006918\|Ga0079216_10948559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	656	Open in IMG/M
3300006918\|Ga0079216_11133820	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300006969\|Ga0075419_10603923	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300007004\|Ga0079218_12374655	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300007004\|Ga0079218_12859765	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300009012\|Ga0066710_104901625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009100\|Ga0075418_10205435	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300009137\|Ga0066709_100310219	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300009147\|Ga0114129_10496715	All Organisms → cellular organisms → Bacteria → Acidobacteria	1594	Open in IMG/M
3300009156\|Ga0111538_12738342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300010336\|Ga0134071_10292573	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300011119\|Ga0105246_11061055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300011271\|Ga0137393_11409817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300011436\|Ga0137458_1156228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300012021\|Ga0120192_10147719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012043\|Ga0136631_10046678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1610	Open in IMG/M
3300012208\|Ga0137376_11803492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012530\|Ga0136635_10008941	All Organisms → cellular organisms → Bacteria	3055	Open in IMG/M
3300012681\|Ga0136613_10751981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012910\|Ga0157308_10240698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300012918\|Ga0137396_10487545	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300012922\|Ga0137394_10184204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781	Open in IMG/M
3300012972\|Ga0134077_10546278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300013297\|Ga0157378_12600928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300015054\|Ga0137420_1350004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300015200\|Ga0173480_10233203	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300015241\|Ga0137418_10687039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300015245\|Ga0137409_11368608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300015259\|Ga0180085_1242766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300015373\|Ga0132257_103716898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300017656\|Ga0134112_10266104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300017659\|Ga0134083_10064823	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300017695\|Ga0180121_10015925	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300018078\|Ga0184612_10284549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300018482\|Ga0066669_11930427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300019458\|Ga0187892_10423152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300019487\|Ga0187893_10724666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300021090\|Ga0210377_10747502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300025322\|Ga0209641_10070769	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300025899\|Ga0207642_10254497	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300025910\|Ga0207684_10891257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300025922\|Ga0207646_11223989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025923\|Ga0207681_11078104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300025927\|Ga0207687_10454507	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300026035\|Ga0207703_10979828	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300026095\|Ga0207676_12045754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300026118\|Ga0207675_101049312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300027637\|Ga0209818_1234692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300027882\|Ga0209590_10221928	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300027909\|Ga0209382_12104808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300028793\|Ga0307299_10375002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031184\|Ga0307499_10029118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300031226\|Ga0307497_10679640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031547\|Ga0310887_10069295	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300031908\|Ga0310900_10070264	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300031944\|Ga0310884_10831255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300032075\|Ga0310890_10476565	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300032163\|Ga0315281_10767823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300032174\|Ga0307470_10343799	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300032180\|Ga0307471_102862168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300032782\|Ga0335082_11314303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300034090\|Ga0326723_0619209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300034177\|Ga0364932_0056121	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.23%
Host-Associated	Host-Associated	30.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.62%
Plants	Host-Associated → Plants	30.77%
Aquatic	Environmental → Aquatic	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.62%
Freshwater	Environmental → Aquatic → Freshwater	5.77%
Sediment	Environmental → Aquatic → Sediment	2.88%
Cave	Environmental → Terrestrial → Cave	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.77%
Ice	Environmental → Aquatic → Freshwater → Ice	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.96%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04808221	2228664021	Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLSALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETAILGPQDIVCVDTVRSD
JGI10216J12902_1004952461	3300000956	Soil	MPTAQEDYYRLRTEWLRYKSQLYDALTGLPALPAVIEDVRRILEARGTVDVVYLDLGRSGGHETTLGWAAYDNAVRELAGLLVSLRQTGEIGAGDPVCLHTVRSDRFLVFLGEGDTTDAGRSAAARRERI
JGI10216J12902_1112126672	3300000956	Soil	LESAFLTTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVIEDVRRLLESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRSGGALAAEDVVCLQTVRSDRFLI
Ga0055440_100869411	3300004020	Natural And Restored Wetlands	VLPTPDRDYFELRTDWLRLKSHVFDGLTGLPSLPAVIEDVRRLLESERSIEVVYVDLGRSGWQESKLGWAAYDAVVKEFAALLGRLRDEGLLARSDVVCLHTVRSDRFLVFLGPGDRPGASSAGRRQDVT
Ga0062589_1005551072	3300004156	Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLDGVIRAVEKRGRVDLVYLDLGRSGGHETKLGWAAYDGAVKEFAGVLKSLVAGGDLGTEGVVCLHTVRSDRFLVFLGDGDATRSVAAQREAVVTAVRKRIEGLPAGSLLHILRLSAGHAR
Ga0062592_1006216761	3300004480	Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLSALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETAILGPQDIVCVDTVRSDRFLLFLGEGEPEEAGRT
Ga0066679_109443021	3300005176	Soil	VRGAPPTSRIRETERSLAVTAHNDYYRLRTEWLRYKSQLYDGLTGLPALPAVMEDVRRIVESRGAADVVYVDLGRSGGQESKLGWAAYDGAVREFAAVVASLKAGGALGPEDVVCLHTVRSDRFLVFLAGGDGSSAVRRDR
Ga0066684_102785032	3300005179	Soil	LESAFLTTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVIEDVRRLLESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRSGGELAA*
Ga0065696_12359371	3300005280	Switchgrass Rhizosphere Bulk Soil	MFSSLPAPDAEYYRLRTEWLRFKSHLYDGLTGLPALPALVEDVRRALEDAGALEVLSLDPGRSGCHEMNLGWSAYDDTLREFAALLGSLRGSGEIAERDLVCLHTVRSDRFLVFMPEAAPSDGSRADRLVAALQRRLA
Ga0070689_1001882893	3300005340	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHT
Ga0070669_1004019091	3300005353	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLKAAGDLGAQDVVCLHTV
Ga0070671_1003710681	3300005355	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAPHDIVCLHTVRSDRFLVFLAGGDGDALAARRAPGGRKEQVVGALRRAIDQSPEDSPL
Ga0070671_1011521802	3300005355	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRILESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGELAPADVVCLHTVRSDRFLVFVAGGESSSGARR
Ga0070700_1000077797	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGAADVVYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVA
Ga0070700_1004860091	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGGAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLTLRDTGPLGPHDIVCLHTVRSDRFLVFLAGSDDALAARRAPGGRKEQVVGALRRAID
Ga0066682_101985593	3300005450	Soil	MSTPLADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSD
Ga0070663_1009476562	3300005455	Corn Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVA
Ga0070662_1002006003	3300005457	Corn Rhizosphere	VLPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGAADVVYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVA
Ga0066697_102150913	3300005540	Soil	MSTPQADYFRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYIDLGRSGGHETQLGWAAYDQAVREFARLLVSLKDTGVLGPPDIVCVDTVRSDRFLLFLGEGEPEEAGRTPVGRRER
Ga0070686_1000284985	3300005544	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQD
Ga0070686_1014308631	3300005544	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAPHDIVCLHTVRSDRFLVFLAGGDGDALA
Ga0070695_1003236461	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LETALPPTSTQTDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVA
Ga0070704_1018849282	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTTTPQEDYYRLRTEWLRYKSQLFDALTGLPALPAVVEDVRRILELRGTVDVVYLDLGRSGGHETTLGWAAYDGAVRELATLLLSLRETGEIGREDPISL
Ga0068861_1013667922	3300005719	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAAHDIVCLHTVRSDRF
Ga0068863_1001404741	3300005841	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAPHDIVCLHTVRSDRFLVFLAGGDGDALAARRAPGGR
Ga0068860_1009626323	3300005843	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAPHDIVCLHTVRSDRFLVFLAGGDGDALAARRAPGGRKEQV
Ga0068862_1007163581	3300005844	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVAGGESSSAARR
Ga0066656_105912611	3300006034	Soil	MSTPLADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFL
Ga0066652_1000853844	3300006046	Soil	MSTPLADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFLGDG
Ga0074054_119418591	3300006579	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRILESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGELGPQDV
Ga0066659_104160621	3300006797	Soil	MATPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGAAEVIYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLALRDTGPLGPLDIVCLHTVRSDRFLVFLGASDADTLAARRAPGGRKEQV
Ga0075428_1005727363	3300006844	Populus Rhizosphere	LNAPEADYYRLRTEWLRFKSQLFDGLTGLPALSAVMDDIRRLLETQGVLDVVYLDLGRSGGHETKLGWAAYDEAVREFASVLGSLREGADMERPDLICLHTVRSDRFLAFLGGAAPSRGSPAARRERVVSAVKA
Ga0075428_1008611513	3300006844	Populus Rhizosphere	MTGSQVGASQADYYRLRTEWLRFKSQLFDGLTGLPALAAVVDEVRVLAEVHGSADVVYLDLGRSGGHETNLGWSAYDEAVREFASVLGSLRGTGDLGPDDIVCLHIVRSDRFL
Ga0075428_1024353881	3300006844	Populus Rhizosphere	VAASQADYYRLRTEWLRFKSQLFDGLTGMPALAAVLDDVRALVANHGSADVVYLDLGRSGGHETNLGWSAYDEAVREFAAVLGGLRETGDLGPDDIVCLHIVRSDRFLVFLA
Ga0075431_1011281712	3300006847	Populus Rhizosphere	LTGLAALPAVLEDVRRIAEARGSADIVYIDLGRSGGHETKLGWAAYDGAVREFAALLLSLVGTGDLGPQDIVCVHTVRSDRFLIFLAEADAGRTPAVRRERVVTAIRARLESA
Ga0075431_1013042721	3300006847	Populus Rhizosphere	LSAAEADYYRLRTEWLRYKSHLYDNLTGLPSLPAVMEDLRRVLETQGCAEVVFLDPGRSGWHETKLGWAAYDRTLREFARALGSLHESGELGNQDLLCLHTVRSDRFLVFLPE
Ga0075431_1022092741	3300006847	Populus Rhizosphere	LSAPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVMDDVRRLLETQGVLDVVYLDLGRSGGHETKLGWAAYDEAVREFASVLGSLRDGAAEDRPDLVCLHTVRSDRFL
Ga0075433_111789961	3300006852	Populus Rhizosphere	MSTPQADYFRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYIDLGRSGGHETQLGWAAYDQAVREFARLLVSLKDTGVLGRPDIVCVDTVRSDRF
Ga0075425_1019997241	3300006854	Populus Rhizosphere	LSTPEADYYRLRTEWLRFKSHLFDSMTGLPALPAVLEDVRRLVESRGFVDVVYLDLGRSGWHETKLGWAAYDQAVREFARIAGLLRGKGALGGQDILCVHTVRSDRFLLFLAGGRELPADNGSS
Ga0079215_111481871	3300006894	Agricultural Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTLEKRGRVDLVYLDLGRSGGHETKLGWAAYDGAVKEFAGVLKSLVTTGELRPDDVVCLHTVRSDRFLVFMSEGDPMRSVAARREAVVTGVRKRIEGLPQGS
Ga0079216_102848691	3300006918	Agricultural Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTLEKRGRVDLVYLDLGRSGGHETKLGWAAYDGAVKEFAGVLKSLVTTGELRPDDVVCLHTVRSDRFLVFMSEGDPMRSVAARR
Ga0079216_109485592	3300006918	Agricultural Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYIDLGRSGGHETKVGWAAYDGAVKEFAGVLKSLATTGELRPDDVVCLHTVRSDRFLIFMSEGDATGSVAARREAVVRFDFAVSPETWQSAAYITFGHMF*
Ga0079216_111338201	3300006918	Agricultural Soil	MPTAQEDYYRLRTEWLRYKSQLFDALTGLPALPAVVEDIRKILEARGTVDVVYLDLGRSGGHETTLGWAAYDHAVRVLGAMLLGLRKTGEIGAGDPICLHTVRSDRFL
Ga0075419_106039231	3300006969	Populus Rhizosphere	LSAPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVMDDVRRLLETQGVLDVVYLDLGRSGGHETKLGWAAYDEAVREFASVLGSLRDGAAEDRPDLVCLHTVRSDRFLTFLGGASLARGSSAARRERVVSAI
Ga0079218_123746551	3300007004	Agricultural Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLIYIDLGRSGGHETKVGWSAYDGAVKEFAGVLKSLATTGELRPDDVVCLH
Ga0079218_128597652	3300007004	Agricultural Soil	VSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDLGRSGGHETKLGWAAYDGAVKEFAGVLKSLVTTGELRPDDVVCLHTVRSDRFLVFMSEGDPTRSVAARREAVVTGVR
Ga0066710_1049016251	3300009012	Grasslands Soil	MSTPQADYFRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYIDLGRSGGHETQLGWAAYDQAVREFARLLVSLKDTGVLGPPDIVCVDTVRSDRFLLFLGEGEPEEAGRTPVG
Ga0075418_102054351	3300009100	Populus Rhizosphere	MPTPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRVLESRGAAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLSLRDTGPLGPADIVCLHTVRSDRFLVFLGASEADALSARRSP
Ga0066709_1003102191	3300009137	Grasslands Soil	MATPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGAAEVIYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLALRDTGPLGPLDIVCLHTVRSDR
Ga0114129_104967153	3300009147	Populus Rhizosphere	MTTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVVYLDLGRSGGHETELGWAAYDQAVREFARLLFSLKESPGILGPADIVCVDTVRSDRFLLFLGEGDPQAAGRTPVGRRE
Ga0111538_127383422	3300009156	Populus Rhizosphere	MPTPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRILESRGAAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLRSLRDTGPLGPADIVCLH
Ga0134071_102925731	3300010336	Grasslands Soil	MSTPLADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIFLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTV
Ga0105246_110610552	3300011119	Miscanthus Rhizosphere	LETALPTTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRILESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGELGPQDVVCLHTVRSDRFLVFLAGGESSSGA
Ga0137393_114098172	3300011271	Vadose Zone Soil	MSTPQADYYRLRTEWLRYKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFLGEGEPEEAGRTPVGRRERVVGSLR
Ga0137458_11562282	3300011436	Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDLGRSGGHETKLGWAAYDGAVKEFAGVLKSLALTGELRSDDVVCLATVRSDRFLVFMSEGDPTRSVAA
Ga0120192_101477191	3300012021	Terrestrial	VAARPGVESLPTSGGPTTAHPQTDYYRLRTECLRYKSQLFDGLTGLPALPAVLEGVRRIVESCGAADVVYLDLGRSGGHETKLGWAAYDGAVREFASLLTALQASGELDGRD
Ga0136631_100466781	3300012043	Polar Desert Sand	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDIGRSGGHETKLGWAAYDGAVKEFAGVLKALAATGELRPDDVVCLY
Ga0137376_118034921	3300012208	Vadose Zone Soil	VETSLPASTHHDYYRLRTEWLRYKSQLYDGLTGLPALPAVMEDVRRIVESKGAADVVYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLQAAGELTPEDVVCLHTVRSDRFLVFTAD
Ga0136635_100089414	3300012530	Polar Desert Sand	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDIGRSGGHETKLGWAAYDGAVKEFSGVLKSLAATGELRPDDVVCLHTVRSDRFLVFMSEGDA
Ga0136613_107519812	3300012681	Polar Desert Sand	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDIGRSGGHETKLGWAAYDGAVKEFAGVLKSLAATGELRPDDVVCLYTVRSDRFLVFMSEGDATRSVAARRE
Ga0157308_102406982	3300012910	Soil	LIESALVSLGDTSSSTTPQADYYALRTEWLRFKSQLFDGLTGLPALPAVMEDVRRVLESRGAAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLSLRDTGPLGPADIVCLHTVRSDRFLVFLGASEADALAA
Ga0137396_104875453	3300012918	Vadose Zone Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLFVSLKETGILGPQDIVCVDTVRSDRFLLFLGEGEPE
Ga0137394_101842043	3300012922	Vadose Zone Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRLLESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRSGGELAPEDVVCLQTVRSDRF
Ga0134077_105462781	3300012972	Grasslands Soil	MSTPQADYYRLRTEWLRFKRQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYIDLGRSGGHETQLGWAAYDQAVREFARLLVSLKDTGVLGPPDIVCVDTVRSDRFLLFLGEGEPEEAGRTPVGRRERVVG
Ga0157378_126009281	3300013297	Miscanthus Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVAGGESSSAARRDRVAV
Ga0137420_13500042	3300015054	Vadose Zone Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFSDVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFLGEG
Ga0173480_102332033	3300015200	Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVIDDVQRALEAHGRVDLVYLDLGRSGGHETKLGWSAYDGAVREFAGVLKSMAAAGDLRREDVVCL
Ga0137418_106870392	3300015241	Vadose Zone Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFSDVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFLGEGEPEEAGRTPVGRRE
Ga0137409_113686081	3300015245	Vadose Zone Soil	MPRPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGAAEVIYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLALRDTGPLGPLDIVCLHTVRSDRFLVFLGASDADALAARRAPGGRKEQVVGALRRAIDSSPEGSPLRSFRLA
Ga0180085_12427661	3300015259	Soil	VTEPDSEYYRLRTEWLRFKSHLFDSLTGLPALAAVVEDVRRILEARGSAYVVYVDLGQSGWHEAKLGWAAYDEAVREFARSLLSLRESGELGSQDIVCLHTVRSDRFLVFQSGDGSNGGGGSAAVRRE
Ga0132257_1037168982	3300015373	Arabidopsis Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGAADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGALGPQDVVCLH
Ga0134112_102661042	3300017656	Grasslands Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVMEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETDILAPPDIVCVDT
Ga0134083_100648231	3300017659	Grasslands Soil	MSTPQADYFRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIV
Ga0180121_100159251	3300017695	Polar Desert Sand	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLVYLDIGRSGGHETKLGWAAYDGAVKEFSGVLKSLAATGELRPDDVVCLHTVRSDRFLVFMSEGDATRSVAARREAVVTGVRKNIEGLPHGSLLRIL
Ga0184612_102845491	3300018078	Groundwater Sediment	MATPEAEYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGAAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLALRDTGPLGAQDIVCLHTVRSDRFLVFLGGSDLDALAARRAPGGRKEQVVGALRRAIDAMPEGSPLRSFRLAS
Ga0066669_119304271	3300018482	Grasslands Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLISLKESGILGPQDIVCVDTVRSDRFLLFLGEG
Ga0187892_104231522	3300019458	Bio-Ooze	VNHPEADYYRLRTEWLRYKSHLRDSLTGLPALAAVVEDVRKLLEAQRGVEVLYLDLGRSGWHETELGWAAYDGLVREFAAALRRARETGLLAPQDIVCLNTVRSDRFLVFLAGG
Ga0187893_107246661	3300019487	Microbial Mat On Rocks	MEALSTVDADYYRLRTEWLRFKSHLFDSLTGLPALPAVLEDVRRLVESRWSVDVLYLDLGRSGWHETKVGWQEYDETVQRFASLLSGLRQTGELGPSDVMCLHTVRSDRFLVFLAGASEE
Ga0210377_107475021	3300021090	Groundwater Sediment	MATPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDIRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLGPADIVCLHTVRSDRFLVFLGASDADALAARRAPGGRKELVVGALRRAIDHSPEDS
Ga0209641_100707691	3300025322	Soil	LSTAQADYYRLRTEWLRFKSQLFDALTGLPALPAVIEDVRRVVEARGGVEVLYLDLGRSGLHEMAHGWAAYDEAVREFAQLLLSSRESGALGTHDVVCLLSVRSDRFIAFLAEEDPRSP
Ga0207642_102544971	3300025899	Miscanthus Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQ
Ga0207684_108912571	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LESAFLTTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVIEDVRRLLESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRSGGELAAEDVVCLQTVRSDRF
Ga0207646_112239891	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTTTPQEDYYRLRTEWLRYKSQLFDALTGLPALPAVVEDVRRILELRGTVDVVYLDLGRSGGHETTLGWAAYDGAVRELATLLLSLRETGEIGREDPISLHTVRSDRQSDVQRAVDDE
Ga0207681_110781041	3300025923	Switchgrass Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDV
Ga0207687_104545071	3300025927	Miscanthus Rhizosphere	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVS
Ga0207703_109798281	3300026035	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAPHDIVCLHTVR
Ga0207676_120457541	3300026095	Switchgrass Rhizosphere	LETALPTTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRILESKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGELAAQDVVCLHTV
Ga0207675_1010493121	3300026118	Switchgrass Rhizosphere	MPTPEADYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDVRRIVESRGAAEVVYLDLGRSGGQELKLGWAAYDEAVREFAGLLLALRDTGPLAAHDIVCLHTVRSDRFLVFLAGGDGDALAARRAPGGRKEQVVGALRRAIDQS
Ga0209818_12346921	3300027637	Agricultural Soil	LSTTPQADYYRLRTEWLRFKSQLFDGLTGLPALPAVLEDVRRTVEKRGRVDLIYIDLGRSGGHETKVGWSAYDGAVKEFAGVLKSLATTGELRPDDVVCLHT
Ga0209590_102219283	3300027882	Vadose Zone Soil	VETSLPASTHHDYYRLRTEWLRYKSQLYDGLTGLPALPAVMEDVRRIVESKGAADVVYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLQASGELTSQDVVC
Ga0209382_121048081	3300027909	Populus Rhizosphere	LPASDADYYRLRTEWLRFKSHLHDGLTGLPALPALVEDVRRALEASGAVDVLSLDPGRSGWHEMNLGWSAYDDTVRQFASLLASLRASGELTSSDLVCLHTVRSDRFLVFLPESSLSGR
Ga0307299_103750022	3300028793	Soil	MSTPQADYYRLRTEWLRFKSQLFDGMTGLPALPAVLEDIRRMVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLVSLKETGILGPQDIVCVDTVRSDRFLLFLGEGDPE
Ga0307499_100291183	3300031184	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRA
Ga0307497_106796402	3300031226	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGSQDVVSLHTVRSDRFLIFIAGGESSSAARR
Ga0310887_100692953	3300031547	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLI
Ga0310900_100702644	3300031908	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLVFV
Ga0310884_108312552	3300031944	Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAAALASLRAGGELGPQDVVSLHTVRSDRFLIFVAGGESSSAARRD
Ga0310890_104765651	3300032075	Soil	MPTPETDYYRLRTEWLRFKSQLFDGLTGLPALPAVMEDVRRIVESRGAAEVVYLDLGRSGGQEMKLGWAAYDEAVREFAGLLLTLRDAGPLGPHDIVCLHTVRSDRFLVFLAGSDDALAARRAPGGRKEQVVGALRRAIDQSP
Ga0315281_107678231	3300032163	Sediment	MTHPEADYYRLRTEWLRYKSQLFDGLTGLPSLAAVVEDVRRIVESQGTVDVVYLDLGRSGGHEAKLGWAAYDEAVREFAGLLGSLHETGAFGGQNLICLHTVRSDRFLVFLGDSDPLQARSAAGRRERVVAAVRSRVGKSSPLRTL
Ga0307470_103437993	3300032174	Hardwood Forest Soil	LETALPPTSTQNDYYRLRTEWLRYKSQLYDGLTGLPALPAVVEDVRRVLETKGTADVIYVDLGRSGGQETKLGWAAYDGAVREFAASLASLRASGELGPQDVVSLHTVRSD
Ga0307471_1028621681	3300032180	Hardwood Forest Soil	VERALPASTHHDYYRLRTEWLRYKSQLYDGLTGLPALPAVIEDVRRIVESKGAADVVYVDLGRSGGQETKLGWAAYDGAVREFAAVLASLRAGGELAPEDVVCLHTVR
Ga0335082_113143031	3300032782	Soil	MAAPEADYYRLRTEWLRFKSHLFDSLTGLPSLPAALEEVRRVVESRGAVEVLYIDLGRSGWHETKLGWAAYDQAVREFALLLSSLRQSGELGAHDLVCL
Ga0326723_0619209_194_502	3300034090	Peat Soil	MNTSPTDYYRLRTEWLRFKSQLFDGLTGLPALPAVIEDIRRVVEDRGFADVIYLDLGRSGGHETQLGWAAYDQAVREFARLLLALKETGVLGPQDIVCVDTVR
Ga0364932_0056121_1087_1482	3300034177	Sediment	MRDSLGAGPHADYFRLRTEWLRFKSHLVDGLTGLPALAAVVEDVRRLLESERSVEVLYLDLGRSGRHETKLGWAAYDEAVRGFAGVLRALSESKALAARDIVCLHTVRSDRFLLFLGPEEHPAARSRRERVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097287

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences