Metagenome / Metatranscriptome Family F097285

Basic Information
Family ID	F097285
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	46 residues
Representative Sequence	DEPTWGDAATTEKEAANEEAKGPVSHSLEWLKSEEGQASIRQNARK
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.54% β-sheet: 0.00% Coil/Unstructured: 59.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07690	MFS_1	72.12
PF08240	ADH_N	3.85
PF13661	2OG-FeII_Oxy_4	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.69 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.69 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	3.85 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	2.88 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	3.85 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	3.85 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3.85 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Unclassified	root	N/A	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02JFJ0E	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
2170459014\|G1P06HT02FRJBU	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	590	Open in IMG/M
2209111022\|2221206555	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300000550\|F24TB_10255811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10087584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300002239\|JGI24034J26672_10094285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300002407\|C687J29651_10185866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	669	Open in IMG/M
3300004114\|Ga0062593_101692379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	691	Open in IMG/M
3300004463\|Ga0063356_106215947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005332\|Ga0066388_106517238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	588	Open in IMG/M
3300005337\|Ga0070682_100394230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1045	Open in IMG/M
3300005354\|Ga0070675_100601451	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300005356\|Ga0070674_100810789	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005441\|Ga0070700_100774367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300005445\|Ga0070708_101236183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300005459\|Ga0068867_101245487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300005549\|Ga0070704_101945028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300005713\|Ga0066905_100497742	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005764\|Ga0066903_103387365	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005764\|Ga0066903_105566639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300006580\|Ga0074049_12427823	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300006604\|Ga0074060_10202164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300006881\|Ga0068865_100428992	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300009177\|Ga0105248_11878043	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300009661\|Ga0105858_1061326	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300009792\|Ga0126374_10905808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300010047\|Ga0126382_11154317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300010047\|Ga0126382_12359531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300010359\|Ga0126376_12092279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300010362\|Ga0126377_10075825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3005	Open in IMG/M
3300010373\|Ga0134128_10645782	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300010375\|Ga0105239_10541648	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300010396\|Ga0134126_11019988	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300010396\|Ga0134126_11187731	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010398\|Ga0126383_10469923	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300010403\|Ga0134123_10276736	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300011119\|Ga0105246_10902951	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012475\|Ga0157317_1000233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2048	Open in IMG/M
3300012476\|Ga0157344_1020466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300012483\|Ga0157337_1022859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300012495\|Ga0157323_1004329	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300012503\|Ga0157313_1015957	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300012507\|Ga0157342_1001422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300012884\|Ga0157300_1069772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300012891\|Ga0157305_10002191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2373	Open in IMG/M
3300012893\|Ga0157284_10008024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1789	Open in IMG/M
3300012906\|Ga0157295_10000374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5374	Open in IMG/M
3300012948\|Ga0126375_10784483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300012948\|Ga0126375_12098602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300012986\|Ga0164304_10058618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2132	Open in IMG/M
3300012987\|Ga0164307_11897434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300014299\|Ga0075303_1006200	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300014969\|Ga0157376_11788028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300015372\|Ga0132256_103763441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300015373\|Ga0132257_103159288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300015374\|Ga0132255_100438072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1910	Open in IMG/M
3300015374\|Ga0132255_103968339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300017947\|Ga0187785_10341312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300017959\|Ga0187779_10573241	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300018060\|Ga0187765_10845185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300018060\|Ga0187765_11142540	Not Available	543	Open in IMG/M
3300018074\|Ga0184640_10423158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300019877\|Ga0193722_1068931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	879	Open in IMG/M
3300022756\|Ga0222622_10536584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300023260\|Ga0247798_1010193	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300024177\|Ga0247686_1049041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300024254\|Ga0247661_1121286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300025167\|Ga0209642_10591667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	605	Open in IMG/M
3300025322\|Ga0209641_10316448	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300025905\|Ga0207685_10091312	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300025922\|Ga0207646_11330759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	626	Open in IMG/M
3300025930\|Ga0207701_10825680	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300025937\|Ga0207669_10658228	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300025938\|Ga0207704_10702731	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300025944\|Ga0207661_12120442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300026088\|Ga0207641_10747645	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300026095\|Ga0207676_11044103	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300026142\|Ga0207698_11596630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300026747\|Ga0207587_101320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300026879\|Ga0207763_1007172	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300027288\|Ga0208525_1031176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300027447\|Ga0207622_100459	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300027717\|Ga0209998_10105966	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027775\|Ga0209177_10495255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	508	Open in IMG/M
3300028711\|Ga0307293_10197472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300028782\|Ga0307306_10192029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300028791\|Ga0307290_10066717	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300028828\|Ga0307312_10312863	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300028875\|Ga0307289_10391870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031057\|Ga0170834_101309194	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031231\|Ga0170824_115142221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031562\|Ga0310886_10263789	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300031573\|Ga0310915_10935282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031847\|Ga0310907_10277174	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300032180\|Ga0307471_101680841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300032205\|Ga0307472_100023050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3456	Open in IMG/M
3300032205\|Ga0307472_100747875	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300032828\|Ga0335080_10603476	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300032892\|Ga0335081_10642957	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300032893\|Ga0335069_12749236	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300033004\|Ga0335084_10418013	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300033433\|Ga0326726_10271259	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300033433\|Ga0326726_10952075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300033758\|Ga0314868_003126	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.04%
Host-Associated	Host-Associated	25.00%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.12%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	1.92%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Sediment	Environmental → Aquatic → Sediment	1.92%
Peat	Environmental → Terrestrial → Peat	1.92%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.23%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012475	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610	Host-Associated	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026747	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A3-10 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027447	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_05273410	2170459005	Grass Soil	MGRGHDEPTWGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNA
2PV_04117440	2170459014	Switchgrass, Maize And Mischanthus Litter	MNRPGAIPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK
2222039934	2209111022	Grass Soil	PKKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
F24TB_102558111	3300000550	Soil	AWGDGDDEPTWGDAATTEKQAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
AF_2010_repII_A001DRAFT_100875842	3300000793	Forest Soil	EPVWGDAVTTEKETANEEAKGPVSHSVEWLKSEEGQASLRQNARK*
JGI24034J26672_100942851	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	TEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
C687J29651_101858662	3300002407	Soil	NWGDGSEEPTWGDAAATQKEAALEEKLAPVSHSREWLRSEEGQTATRQNTRK*
Ga0062593_1016923792	3300004114	Soil	AWGDGEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGQAALRQSARK*
Ga0063356_1062159472	3300004463	Arabidopsis Thaliana Rhizosphere	TWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGQASLRQAARK*
Ga0066388_1065172382	3300005332	Tropical Forest Soil	YRPRAWGEGDDEPTWGDAATTEKETAAEEAKGPVSHSAEWFKSEEGQASTRQKNARK*
Ga0070682_1003942302	3300005337	Corn Rhizosphere	RPRAWGDGEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0070675_1006014512	3300005354	Miscanthus Rhizosphere	EGDDEPTWGDAATTEKETAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0070674_1008107892	3300005356	Miscanthus Rhizosphere	EDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0070700_1007743671	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PRAWGDGDDEPTWGDATATEKEAAAEEAKGPVSHSLEWLKSEEGQASLRQNARK*
Ga0070708_1012361832	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GDAAETEKEAAAEEAKGPVSHSREWLRSEEGQAAARQSARK*
Ga0068867_1012454872	3300005459	Miscanthus Rhizosphere	EGDDEPTWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0070704_1019450281	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0066905_1004977422	3300005713	Tropical Forest Soil	GDAATTEKETAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0066903_1033873651	3300005764	Tropical Forest Soil	GDDEPTWGDAATTEKETAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0066903_1055666391	3300005764	Tropical Forest Soil	WGEGDDEPTWGDAATTEKETAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0074049_124278231	3300006580	Soil	DEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0074060_102021641	3300006604	Soil	GDGEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0068865_1004289922	3300006881	Miscanthus Rhizosphere	TTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0105248_118780431	3300009177	Switchgrass Rhizosphere	EKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0105858_10613261	3300009661	Permafrost Soil	DAKATEKEADKEEQESPVSHSLEWLRSEEGRASTRQSARK*
Ga0126374_109058082	3300009792	Tropical Forest Soil	WGDAATTEKETAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0126382_111543171	3300010047	Tropical Forest Soil	DEPIWGDAAATEKEAAAEEAKGPVSHSKEWLKSEEGQAFTRQKNARK*
Ga0126382_123595311	3300010047	Tropical Forest Soil	DAAVTEKEAAAEEAEGPVSHSKEWLKSEEGQAFTRQKNAHK*
Ga0126376_120922791	3300010359	Tropical Forest Soil	GEDEPVWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASLRQNARK*
Ga0126377_100758251	3300010362	Tropical Forest Soil	TTEKQAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK*
Ga0134128_106457821	3300010373	Terrestrial Soil	EPTWGDPAETEKEAAKEEARGPVSHSKEWLKSEEGQASLRQSARK*
Ga0105239_105416482	3300010375	Corn Rhizosphere	AATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0134126_110199881	3300010396	Terrestrial Soil	EAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0134126_111877311	3300010396	Terrestrial Soil	WGDGEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGQALLRQSARK*
Ga0126383_104699232	3300010398	Tropical Forest Soil	WGNGEDEPVWGDPETTEKETAKEEAKGPVSHSIEWLKSEEGQAAARQSARR*
Ga0134123_102767361	3300010403	Terrestrial Soil	AWGDGDDEPTWGDATATEKEAAAEEAKGPVSHSLEWLKSEEGQASLRQNARK*
Ga0105246_109029512	3300011119	Miscanthus Rhizosphere	GEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0157317_10002333	3300012475	Arabidopsis Rhizosphere	PAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0157344_10204661	3300012476	Arabidopsis Rhizosphere	AATTEKEAAAEEAKGPVSHSLEWLKAEEGQASTRQKNARK*
Ga0157337_10228592	3300012483	Arabidopsis Rhizosphere	DAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0157323_10043292	3300012495	Arabidopsis Rhizosphere	ETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0157313_10159572	3300012503	Arabidopsis Rhizosphere	PRAWGDGEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0157342_10014221	3300012507	Arabidopsis Rhizosphere	EKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0157300_10697722	3300012884	Soil	DPVETEKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSARR*
Ga0157305_100021911	3300012891	Soil	DPAETEKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSARR*
Ga0157284_100080243	3300012893	Soil	GDPAETEKEAAKEEAQGPVSHSKEWLKSEEGQALLRQSARK*
Ga0157295_100003741	3300012906	Soil	AWGDGEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0126375_107844832	3300012948	Tropical Forest Soil	WGDAVTTEKQAAAEEAKGAVSHSLEWLKSQEGQASIRQKNARK*
Ga0126375_120986021	3300012948	Tropical Forest Soil	EPVWGDAATTEKETANEEAKGPVSHSLEWLKSDEGQASLRQNARK*
Ga0164304_100586181	3300012986	Soil	DEPTWGDAATTEKEAANEEAKGPVSHSLEWLKSEEGQASIRQNARK*
Ga0164307_118974341	3300012987	Soil	PTAWGDGEDEPTWGDPVTTEKEADREEKMAPVSHSLEWLRSEEGRASLRQNARK*
Ga0075303_10062001	3300014299	Natural And Restored Wetlands	PRAWGDGEDEPTWGDPAETEKETAKEEAQGPVSHSKEWLKSEEGQALLRQSARN*
Ga0157376_117880282	3300014969	Miscanthus Rhizosphere	TWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0132256_1037634412	3300015372	Arabidopsis Rhizosphere	DEPTWGDPVATEKEADKEEKMAPVSHSLEWLRSEEGRASLRQNARK*
Ga0132257_1031592881	3300015373	Arabidopsis Rhizosphere	FYRPTAWGDGEDEPTWGDPVATEKEADKEEKMAPVSHSLEWLRSEEGRASLRQNARK*
Ga0132255_1004380721	3300015374	Arabidopsis Rhizosphere	DPAEIEKEATKEEAQGPVSHSKEWLKSEEGQASLRQSARK*
Ga0132255_1039683392	3300015374	Arabidopsis Rhizosphere	EKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK*
Ga0187785_103413121	3300017947	Tropical Peatland	DEPTWGNPEESAKETANEEAKGPVSHSLEWLRAQEEQAPPRHTARK
Ga0187779_105732412	3300017959	Tropical Peatland	GDAATTAKETAQEEAKGPVSHSLEWLRSEEGKASLRQNARK
Ga0187765_108451851	3300018060	Tropical Peatland	HTFYRPLNWGNGEEEPVWSDPVTTEKHASMEEAKGPVNHSLEYLRSEEGQAELRAKAGK
Ga0187765_111425402	3300018060	Tropical Peatland	LTWGAGDEEPVWSDPATTEKHAAMEESMGPVSHSKEWLQSDEGQAEAARERK
Ga0184640_104231581	3300018074	Groundwater Sediment	DDEPTWGDPVTTEREAAAEEAKGPVSHSSEWLRSEEGRAAARQSARK
Ga0193722_10689312	3300019877	Soil	WGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
Ga0222622_105365841	3300022756	Groundwater Sediment	KEAAAEEAKGPVNHSLEWLKSEEGQASTRQKNARK
Ga0247798_10101931	3300023260	Soil	AWGDGEDEPTWGDPVETEKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSARR
Ga0247686_10490411	3300024177	Soil	GEGDDEPTWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0247661_11212862	3300024254	Soil	EGDDEPTWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0209642_105916671	3300025167	Soil	FYRPRNWGDGSEEPTWGDAAATQKEAALEEKLAPVSHSREWLRSEEGQTATRQNTRK
Ga0209641_103164481	3300025322	Soil	PTWGDAAATQKEAALEEKLAPVSHSREWLRSEEGQTATRQNTRK
Ga0207685_100913122	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GDASATDKEAANEEAKGPVSHSLEWLKSEEGQASLRQNARK
Ga0207646_113307592	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RAWGDGEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGLASLRQSARK
Ga0207701_108256801	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGLASLRQSARK
Ga0207669_106582281	3300025937	Miscanthus Rhizosphere	RAWGDGEDEPTWGDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK
Ga0207704_107027312	3300025938	Miscanthus Rhizosphere	TTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0207661_121204422	3300025944	Corn Rhizosphere	DDEPTWGDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0207641_107476452	3300026088	Switchgrass Rhizosphere	GEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGLASLGQSARK
Ga0207676_110441032	3300026095	Switchgrass Rhizosphere	DGEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGLASLRQSARK
Ga0207698_115966302	3300026142	Corn Rhizosphere	PRAWGDGDDEPVWGDASATDKEAANEEAKGPVSHSLEWLKSEEGQASLRQNARK
Ga0207587_1013202	3300026747	Soil	EKEAAKEEAQGPVSHSREWLKSEEGQASLRQSARR
Ga0207763_10071721	3300026879	Tropical Forest Soil	DPVITQKVAATEEAMGPVSHSSEWLRSEEGQASLRQKIR
Ga0208525_10311761	3300027288	Soil	YRPRAWGDGEDEPTWGDPVETAKEAANEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0207622_1004591	3300027447	Soil	AETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARR
Ga0209998_101059661	3300027717	Arabidopsis Thaliana Rhizosphere	RPRAWGDGEDEPTWGDPAETEKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSAHR
Ga0209177_104952552	3300027775	Agricultural Soil	AAATEKEAAIEEAKGPVSHSLEWLRSEEGRASLGQNARK
Ga0307293_101974722	3300028711	Soil	AWGEGDDEPTWGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
Ga0307306_101920291	3300028782	Soil	PRAWGEGDDEPTWGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
Ga0307290_100667172	3300028791	Soil	YRPRAWGEGDDEPTWGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
Ga0307312_103128632	3300028828	Soil	EPTWGDAAATEKEAAAEEAKGPVSHSIEWLRSEEGRASGRQSARK
Ga0307289_103918702	3300028875	Soil	RAWGEGDDEPTWGDAATTEKEAAAEEAKGPVSHSAEWLKSEEGQASTRQKNARK
Ga0170834_1013091942	3300031057	Forest Soil	GDGDDEPTWGDAATTEKEAANEEAKGPVSHSLEWLKSEEGQASLRQNAHK
Ga0170824_1151422212	3300031231	Forest Soil	WGDGEDEPVWGDPVETAKEAANEEAKGPVSHSREWLRSEEGQAAARQNARK
Ga0310886_102637891	3300031562	Soil	GDPAETEKEAANEEAQGPVSHSKEWLKSEEGQASLRQSARK
Ga0310915_109352821	3300031573	Soil	PRAWGGGEDEPVWGDPATTEKETASEEAKGPVSHSLEWLKSEEGQASLRPSAGK
Ga0310907_102771741	3300031847	Soil	IEKEATKEEAQGPVSHSKEWLKSEEGQASLRQSARK
Ga0307471_1016808411	3300032180	Hardwood Forest Soil	GDAATTEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0307472_1000230505	3300032205	Hardwood Forest Soil	TEKEAAAEEAKGPVSHSLEWLKSEEGQASTRQKNARK
Ga0307472_1007478752	3300032205	Hardwood Forest Soil	EKEAAKEEAQGPVSHSKEWLKSEEGQASLRQSARR
Ga0335080_106034761	3300032828	Soil	DGEDEPTWGNPDETAKEAANEEAKGPVSHSREWLRSEEGQAAARQNARK
Ga0335081_106429571	3300032892	Soil	YRPLTGGTGEEEPVWSDPATTEKHAAMEESLGPVSHSKEWLQSEEGQAEMRAKAGK
Ga0335069_127492361	3300032893	Soil	WGDPAETAKEAANEEAKGPVSHSLEWLRSEEGQAFVRQNARK
Ga0335084_104180132	3300033004	Soil	DPVATEKEAANEEKMAPVSHSLEWLRSEEGRASLRQNARK
Ga0326726_102712591	3300033433	Peat Soil	GDPAETAKEAANEEAKGPVSHSIEWLRSEEGQAFVRQNARK
Ga0326726_109520751	3300033433	Peat Soil	VWGDPVETAKEAANEEAKGPVSHSREWLRSEEGQAAARQNAHK
Ga0314868_003126_1_120	3300033758	Peatland	PVETAKEAANEEAKGPVSHSREWLRSEEGQAAARLNARK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097285

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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