Metagenome / Metatranscriptome Family F097187

Basic Information
Family ID	F097187
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	42 residues
Representative Sequence	TMKRLEALEKMLSLGLIDVEEAKEMEQMTPNGRETEDETYIQ
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.92 %
% of genes from short scaffolds (< 2000 bps)	0.96 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (98.077 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (75.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (76.923 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1JGI12421J11937_100382463 2GOS2228_10419172 3B570J29590_1001869 4B570J29584_10047202 5B570J29032_1088560592 6B570J29032_1092013892 7LO132_100217421 8B570J40625_1017100491 9JGI25908J49247_101255471 10JGI25910J50241_101378581 11JGI25907J50239_10709581 12JGI25920J50251_100854461 13JGI25911J50253_101799243 14JGI25924J51412_10668762 15JGI25923J51411_10571551 16Ga0065166_103340651 17Ga0049083_102434311 18Ga0049082_102627211 19Ga0079957_13395381 20Ga0075471_103277151 21Ga0075472_102827692 22Ga0099851_13231352 23Ga0099847_11105131 24Ga0099850_10312953 25Ga0114351_13923981 26Ga0114355_10580754 27Ga0114336_10468821 28Ga0114349_11705781 29Ga0114363_11664171 30Ga0114363_11810672 31Ga0114363_12049702 32Ga0114363_12205422 33Ga0114880_11989922 34Ga0114880_12154601 35Ga0114880_12188542 36Ga0114880_12363212 37Ga0114880_12724712 38Ga0114980_105372951 39Ga0114968_105482832 40Ga0114977_103782692 41Ga0114977_105474901 42Ga0114977_106512841 43Ga0114981_107548281 44Ga0114966_106577221 45Ga0114970_107375992 46Ga0105102_104622582 47Ga0114979_105349121 48Ga0114969_105238882 49Ga0114967_104172372 50Ga0157598_12105811 51Ga0157605_10724511 52Ga0157602_11279961 53Ga0164293_106950672 54Ga0170791_158398531 55Ga0177922_110143181 56Ga0177922_112243191 57Ga0181365_10930182 58Ga0181365_11177471 59Ga0181356_12060421 60Ga0181343_10739682 61Ga0181358_12051562 62Ga0181358_12223922 63Ga0181358_12320151 64Ga0181357_10448132 65Ga0181349_12603482 66Ga0181346_12081251 67Ga0188851_10267152 68Ga0181359_12057912 69Ga0181359_12229062 70Ga0207193_18398971 71Ga0208235_10280072 72Ga0208235_10286711 73Ga0208235_10297041 74Ga0207942_10288982 75Ga0208855_10363141 76Ga0222712_101705532 77Ga0222712_107902871 78Ga0196905_11493212 79Ga0196901_10362961 80Ga0214917_102338182 81Ga0214919_106016871 82Ga0255087_10195942 83Ga0209033_12369931 84Ga0209297_12818091 85Ga0209444_102735141 86Ga0209598_103820181 87Ga0209088_102956132 88Ga0209768_101659833 89Ga0209500_102523971 90Ga0209500_102880221 91Ga0209246_103010032 92Ga0209401_12518002 93Ga0209401_12561551 94Ga0315294_106228852 95Ga0315906_109258722 96Ga0315905_110402921 97Ga0334979_0591859_3_125 98Ga0334998_0518691_530_655 99Ga0334995_0048638_36_161 100Ga0334995_0547428_524_649 101Ga0335027_0607140_29_154 102Ga0335066_0687866_333_458 103Ga0335056_0212206_989_1111 104Ga0335016_0548779_494_619
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1JGI12421J11937_100382463 2GOS2228_10419172 3B570J29590_1001869 4B570J29032_1088560592 5B570J40625_1017100491 6JGI25908J49247_101255471 7Ga0079957_13395381 8Ga0075472_102827692 9Ga0099850_10312953 10Ga0114355_10580754 11Ga0114980_105372951 12Ga0114977_106512841 13Ga0181349_12603482
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0157602_11279961 2B570J29584_10047202 3B570J29032_1088560592 4LO132_100217421 5B570J40625_1017100491 6JGI25907J50239_10709581 7Ga0075472_102827692 8Ga0114351_13923981 9Ga0114880_12363212 10Ga0114880_12724712 11Ga0114968_105482832 12Ga0114966_106577221 13Ga0177922_112243191 14Ga0181358_12223922 15Ga0188851_10267152 16Ga0222712_101705532 17Ga0222712_107902871 18Ga0209401_12518002 19Ga0209401_12561551 20Ga0315294_106228852 21Ga0334979_0591859_3_125
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.43% β-sheet: 0.00% Coil/Unstructured: 68.57%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04586	Peptidase_S78	86.54
PF05065	Phage_capsid	5.77

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	86.54
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	5.77

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	1.92 %
Unclassified	root	N/A	98.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Viruses	superkingdom	All Organisms → Viruses	1.92 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.92 %
Unclassified	root	N/A	98.08 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.92 %
Unclassified	root	N/A	98.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.92 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.92 %
Unclassified	root	N/A	98.08 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.92 %
Unclassified	root	N/A	98.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.92 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002278\|B570J29590_100186	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6190	Open in IMG/M
3300022200\|Ga0196901_1036296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.38%
Marine	Environmental → Aquatic → Marine	9.62%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	6.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.96%
Lake	Environmental → Aquatic → Freshwater → Lake	49.04%
Lentic	Environmental → Aquatic → Freshwater → Lentic	36.54%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	0.96%
River	Environmental → Aquatic → Freshwater → River	0.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.12%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	29.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.73%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.46%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.88%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.92%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.96%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	24.04%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	17.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	0.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.96%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	7.69%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.96%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.96%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300002278	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002294	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M

Showing 1 to 10 of 83 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100382463	3300000756	Freshwater And Sediment	KRLEALEKMLSLGLITVEEAKEMENMTPEGNENGNAEYINSTKGENA*
GOS2228_10419172	3300001948	Marine	MKRLEAIEKMLSLGLIDVEQAKEMEDMSPNGNESTDATYVQ*
B570J29590_1001869	3300002278	Freshwater	MKRLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
B570J29584_10047202	3300002294	Freshwater	LRADTMKRLEALEKMINLGLIDVEEAKEMEQMTPNGREEDNETYIQ*
B570J29032_1088560592	3300002408	Freshwater	EAIEKMLSLGLIDIDDAKEMESLTPNGREVEDDTYIQ*
B570J29032_1092013892	3300002408	Freshwater	ADTMKRLEAIEKMLALGLIDVEDAKEMEQMTPNGKEVEDDTYIQ*
LO132_100217421	3300002465	Freshwater Lake	MKRLEALEKMLSLGLITVEEAKQMEDLTPNGNESADVTYVQ*
B570J40625_1017100491	3300002835	Freshwater	ADTMKRLEAIEKMLTLGLIDLDTAKEMEDMTPEGSESNDETYIQ*
JGI25908J49247_101255471	3300003277	Freshwater Lake	RADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ*
JGI25910J50241_101378581	3300003388	Freshwater Lake	EALEKMLSLGLITVEEAKEMENMTPEGNENGNAEYISSTKGENA*
JGI25907J50239_10709581	3300003394	Freshwater Lake	MKRLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ*
JGI25920J50251_100854461	3300003404	Freshwater Lake	GVRADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGNENGNAEYISSTKGENA*
JGI25911J50253_101799243	3300003411	Freshwater Lake	KMLSLGLITVEEAKEMENMTPEGNXNGNAEYISSTKGENA*
JGI25924J51412_10668762	3300003491	Freshwater Lake	ALEKMLSLGLITVEEAKEMENMTPEGNENDNAEYINSTKGENA*
JGI25923J51411_10571551	3300003493	Freshwater Lake	RLEALEKMLSLGLITVEEAKEMENMTPEGNENDNAEYINSTKGENA*
Ga0065166_103340651	3300004112	Freshwater Lake	DTMKRLEAIEKMLSLGLIDIDDAKEMESLTPNGREVEDDTYIQ*
Ga0049083_102434311	3300005580	Freshwater Lentic	RLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ*
Ga0049082_102627211	3300005584	Freshwater Lentic	EALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ*
Ga0079957_13395381	3300005805	Lake	IEKMLSLGLIDVEQAKEMESLTPNGNEDTDVTYVQ*
Ga0075471_103277151	3300006641	Aqueous	DTMKRLEALEKMINLGLIDVEDAKEMESLTPNGKEEEDETYIQ*
Ga0075472_102827692	3300006917	Aqueous	LRADTAKRLEAIEKMLNLGLIDVEQAKQMENMTPNGNETNDATYVQ*
Ga0099851_13231352	3300007538	Aqueous	EAIEKMLALGLIDVEQAKEMEQMTPNGNEEADATYIQ*
Ga0099847_11105131	3300007540	Aqueous	FLRADTIKRLEAIEKMLALGLIDVEQAKEMEQMTPNGNEEADATYIQ*
Ga0099850_10312953	3300007960	Aqueous	EESFLRADTMKRLEAIEKMLNLGLIDVEDAKEMESLTPNGRETEDETYIQ*
Ga0114351_13923981	3300008117	Freshwater, Plankton	MKRLEAIEKMLSLGLIDVEQAKEMEQMTPNGNEDTDVTYVQ*
Ga0114355_10580754	3300008120	Freshwater, Plankton	DTIKRLEAIEKMLNLGLIDIDDAKEMESLTPNGREEDNETYIQ*
Ga0114336_10468821	3300008261	Freshwater, Plankton	ESFLRADTIKRLEAIEKMLALGLIDVEDAKEMEQMTPNGREVEDDTYIQ*
Ga0114349_11705781	3300008263	Freshwater, Plankton	TMKRLEALEKMMALGLIDVEDAKEMEQMTPNGRETEDETYIQ*
Ga0114363_11664171	3300008266	Freshwater, Plankton	EESFLRADTMKRLEALEKMINLGLIDVEQAKEMEQMTPNGREQDDDTYIQ*
Ga0114363_11810672	3300008266	Freshwater, Plankton	SFLRADTMKRLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0114363_12049702	3300008266	Freshwater, Plankton	IEKMLSLGLIDVEQAKEMEQMTPNGNEDTDVTYVQ*
Ga0114363_12205422	3300008266	Freshwater, Plankton	KRLEALEKMLALGLIDVEDAKEMESLTPNGRETEDDTYIQ*
Ga0114880_11989922	3300008450	Freshwater Lake	TMKRLEALEKMLNLGLIDIDDAKEMESLTPNGREEEDDTYIQ*
Ga0114880_12154601	3300008450	Freshwater Lake	LEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0114880_12188542	3300008450	Freshwater Lake	ALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0114880_12363212	3300008450	Freshwater Lake	RADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGNENNNAEYINSTKGENA*
Ga0114880_12724712	3300008450	Freshwater Lake	TMKRLEALEKMLNLGLIDIDDAKEMESLTPNGREEEDETYIQ*
Ga0114980_105372951	3300009152	Freshwater Lake	RADTMKRLEAIEKMLSLGLIDIQQAKEMEDMSPNGSESYNVS*
Ga0114968_105482832	3300009155	Freshwater Lake	SFLRADTMKRLEAIEKMLALGLIDVEDAKEMESLTPNGRETEDDTYIQ*
Ga0114977_103782692	3300009158	Freshwater Lake	IEKMLSLGLIDVEQAKQMEQMTPNGNETDNATYVQ*
Ga0114977_105474901	3300009158	Freshwater Lake	KRLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS*
Ga0114977_106512841	3300009158	Freshwater Lake	EAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS*
Ga0114981_107548281	3300009160	Freshwater Lake	LEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS*
Ga0114966_106577221	3300009161	Freshwater Lake	SFLRADTMKRLEAIEKMLALGLIDVEQAKEMEDMSPNGNENYNVS*
Ga0114970_107375992	3300009163	Freshwater Lake	EAIEKMLSLGLIDVEQAKEMEDMSPNGNESTDATYVQ*
Ga0105102_104622582	3300009165	Freshwater Sediment	RADTMKRLEALEKMINLGLIDVEEAKEMEQMTPNGREEDNETYIQ*
Ga0114979_105349121	3300009180	Freshwater Lake	FLRADTMKRLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS*
Ga0114969_105238882	3300009181	Freshwater Lake	EKMLALGLIDVEDAKEMEQMTPNGKEVEDDTYIQ*
Ga0114967_104172372	3300010160	Freshwater Lake	RLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS*
Ga0157598_12105811	3300012712	Freshwater	KRLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0157605_10724511	3300012716	Freshwater	RLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0157602_11279961	3300012730	Freshwater	TMKRLEALEKMLSLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0164293_106950672	3300013004	Freshwater	RLEALEKMLSLGLIDVEEAKEMEQMTPNGRETEDETYIQ*
Ga0170791_158398531	3300013295	Freshwater	DTMKRLEAIEKMLSLGLIDVEQAKEMEDMTPNGNESYNVS*
Ga0177922_110143181	3300013372	Freshwater	DTMKRLEAIEKMLTLGLIDLDTAKEMEDMTPEGSESNDETYIR*
Ga0177922_112243191	3300013372	Freshwater	ESFLRADTMKRLEALEKMLAFGLIDVEDAKEMENMTPNGKEVEDDTYIQ*
Ga0181365_10930182	3300017736	Freshwater Lake	ALEKMLNLGLIDIDDAKQMESLTPNGREVEDDTYIQ
Ga0181365_11177471	3300017736	Freshwater Lake	KRLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ
Ga0181356_12060421	3300017761	Freshwater Lake	TMKRLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ
Ga0181343_10739682	3300017766	Freshwater Lake	DTMKRLEALEKMINLGLIDVEQAKEMEQMTPNGREQDDDTYIQ
Ga0181358_12051562	3300017774	Freshwater Lake	LRADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGSENNATYIQ
Ga0181358_12223922	3300017774	Freshwater Lake	RADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGSENDVTYVQ
Ga0181358_12320151	3300017774	Freshwater Lake	LEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ
Ga0181357_10448132	3300017777	Freshwater Lake	RADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ
Ga0181349_12603482	3300017778	Freshwater Lake	EALEKMLSLGLITVEEAKEMENMTPEGSENDVTYVQ
Ga0181346_12081251	3300017780	Freshwater Lake	AIEKMLALGLIDVEDAKEMEQMTPNGKEVEDDTYIQ
Ga0188851_10267152	3300018682	Freshwater Lake	TIKRLEAIEKMLALGLIDVEQAKEMEQMTPNGNEEADATYIQ
Ga0181359_12057912	3300019784	Freshwater Lake	SFLRADTMKRLEAIEKMLALGLIDVEDAKEMESLTPNGRETEDDTYIQ
Ga0181359_12229062	3300019784	Freshwater Lake	MKRLEALEKMLSLGLITVEEAKEMENMTPEGSENDVTYVQ
Ga0207193_18398971	3300020048	Freshwater Lake Sediment	MKRLEAIEKMLALGLIDVEDAKEMEQMTPNGKEVEDDTYIQ
Ga0208235_10280072	3300020530	Freshwater	MKRLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ
Ga0208235_10286711	3300020530	Freshwater	ADTMKRLEAIEKMLALGLIDVEDAKEMEQMTPNGKEVEDDTYIQ
Ga0208235_10297041	3300020530	Freshwater	MKRLEALEKMINLGLIDVEEAKEMEQMTPNGREEDNETYIQ
Ga0207942_10288982	3300020549	Freshwater	LRADTMKRLEALEKMINLGLIDVEEAKEMEQMTPNGRETEDETYIQ
Ga0208855_10363141	3300020553	Freshwater	LRADTMKRLEALEKMINLGLIDVEEAKEMEQMTPNGREEDNETYIQ
Ga0222712_101705532	3300021963	Estuarine Water	FLRADTMKRLEAIEKMLALGLIDVEQAKEMEDMTPNGNESNDATYVQ
Ga0222712_107902871	3300021963	Estuarine Water	TMKRLEAIEKMLALGLIDLEDAKEMEQMTPNGSEVEDDTYIQ
Ga0196905_11493212	3300022198	Aqueous	IEKMLALGLIDVEQAKEMEQMTPNGNEEADATYIQ
Ga0196901_10362961	3300022200	Aqueous	FLRADTMKRLEAIEKMLNLGLIDVEDAKEMESLTPNGREIEDETYIQ
Ga0214917_102338182	3300022752	Freshwater	RLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS
Ga0214919_106016871	3300023184	Freshwater	ESFLRADTMKRLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS
Ga0255087_10195942	3300027337	Freshwater	LEAIEKMLSLGLIDVEQAKEMEDMTPNGNESEDATYVQ
Ga0209033_12369931	3300027697	Freshwater Lake	RADTMKRLEAIEKMLALGLIDVEDAKEMESLTPNGRETEDDTYIQ
Ga0209297_12818091	3300027733	Freshwater Lake	MKRLEAIEKMLSLGLIDVEQAKEMEDMSPNGNESYNVS
Ga0209444_102735141	3300027756	Freshwater Lake	RLEALEKMLSLGLITVEEAKEMENMTPEGNENDNAEYINSTKGENA
Ga0209598_103820181	3300027760	Freshwater Lake	RLEAIEKMLSLGLIDVEQAKEMEDMSPNGNESYNVS
Ga0209088_102956132	3300027763	Freshwater Lake	FLRADTMKRLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS
Ga0209768_101659833	3300027772	Freshwater Lake	ADTMKRLEALEKMLSLGLITVEEAKEMENMTPEGNENGNAEYISSTKGENA
Ga0209500_102523971	3300027782	Freshwater Lake	IEKMLSLGLIDVEQAKEMEDMTPNGNESNDATYVQ
Ga0209500_102880221	3300027782	Freshwater Lake	MKRLEAIEKMLALGLIDVEQAKEMEDMSPNGNESYNVS
Ga0209246_103010032	3300027785	Freshwater Lake	RLEALEKMLSLGLITVEEAKEMENMTPEGSEDNATYIQ
Ga0209401_12518002	3300027971	Freshwater Lake	DTMKRLEAIEKMLALGLIDIQQAKEMEDMSPNGSESYNVS
Ga0209401_12561551	3300027971	Freshwater Lake	TIKRLEAIEKMLSLGLIDVEQAKQMEQMTPNGNETDNATYVQ
Ga0315294_106228852	3300031952	Sediment	LRADTMKRLEAIEKMLTLGLIDLDHAKEMENMTPEGSADNATYVQ
Ga0315906_109258722	3300032050	Freshwater	LRADTMKRLEAIEKMLQLGLIDVDDAKEMEDLTPNGREVEDDTYIQ
Ga0315905_110402921	3300032092	Freshwater	TMKRLEALEKMLSIFLITVEEAKEMENMTPEGNENSNGEYINSTKGENA
Ga0334979_0591859_3_125	3300033996	Freshwater	KRLEAIEKMLNLGLIDLDDAKQMESLTPNGREEDNETYIQ
Ga0334998_0518691_530_655	3300034019	Freshwater	MKRLEAIEKMLALGLIDVEDAKEMEQMTPNGRETEDETYIQ
Ga0334995_0048638_36_161	3300034062	Freshwater	MKRLEALEKMINLGLIDVEDAKEMEQMTPNGRETEDETYIQ
Ga0334995_0547428_524_649	3300034062	Freshwater	MKRLEALEKMINLGLIDVEDAKEMEQMTPNGRETENETYIQ
Ga0335027_0607140_29_154	3300034101	Freshwater	MKRLEALEKMLNLGLIDIDDAKEMESLTPNGREEEDDTYIQ
Ga0335066_0687866_333_458	3300034112	Freshwater	MKRLEALEKMLALGLIDVEDAKEMENMTPNGKEVEDDTYIQ
Ga0335056_0212206_989_1111	3300034120	Freshwater	KRLEAIEKMLALGLIDVEDAKEMEQMTPNGREVEDDTYIQ
Ga0335016_0548779_494_619	3300034166	Freshwater	MKRLEAIEKMLALGLIDVEDAKEMESLTPNGRETEDDTYIQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097187

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences