Metagenome / Metatranscriptome Family F097177

Basic Information
Family ID	F097177
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	65 residues
Representative Sequence	IMAVETIDYNGYRLEVVPVGKGWRVSIYPPDSTLALRESPSILEKVPKETVIAEAKKIVDARAATN
Number of Associated Samples	69
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.81 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Most Common Taxonomy
Group	Unclassified (61.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.731 % of family members)
Environment Ontology (ENVO)	Unclassified (52.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.15% β-sheet: 23.40% Coil/Unstructured: 57.45%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
e.3.1.0: automated matches	d4ovda2	4ovd	0.6681
e.3.1.0: automated matches	d6xqya1	6xqy	0.66663
d.110.1.1: Profilin (actin-binding protein)	d2pbdp_	2pbd	0.65812
e.3.1.0: automated matches	d6i1ha1	6i1h	0.64106
e.3.1.1: beta-Lactamase/D-ala carboxypeptidase	d2d83a_	2d83	0.64039

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04545	Sigma70_r4	9.62
PF02195	ParBc	4.81
PF00313	CSD	3.85
PF00118	Cpn60_TCP1	2.88
PF04392	ABC_sub_bind	1.92
PF13189	Cytidylate_kin2	1.92
PF05362	Lon_C	1.92
PF01176	eIF-1a	1.92
PF13561	adh_short_C2	0.96
PF00857	Isochorismatase	0.96
PF13007	LZ_Tnp_IS66	0.96
PF13592	HTH_33	0.96
PF00872	Transposase_mut	0.96
PF00589	Phage_integrase	0.96
PF01738	DLH	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	1.92
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.92
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	1.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.92
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	1.92
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.96
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
All Organisms	root	All Organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
cellular organisms	root	All Organisms → cellular organisms	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.54 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.88 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.12 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.65 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.92 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.92 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.92 %
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1.92 %
Methylosinus sp. LW3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.96 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10206630	Not Available	1031	Open in IMG/M
3300004633\|Ga0066395_10663202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	616	Open in IMG/M
3300005560\|Ga0066670_10725069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300005764\|Ga0066903_101986275	Not Available	1117	Open in IMG/M
3300005764\|Ga0066903_102166342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300005764\|Ga0066903_103984271	Not Available	792	Open in IMG/M
3300005764\|Ga0066903_106302940	Not Available	619	Open in IMG/M
3300006642\|Ga0075521_10185167	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300009029\|Ga0066793_10551028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300009088\|Ga0099830_10400219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300009088\|Ga0099830_10639240	Not Available	874	Open in IMG/M
3300009089\|Ga0099828_10542360	Not Available	1048	Open in IMG/M
3300009089\|Ga0099828_11745657	Not Available	547	Open in IMG/M
3300010048\|Ga0126373_10013787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6640	Open in IMG/M
3300010048\|Ga0126373_10964232	Not Available	918	Open in IMG/M
3300010048\|Ga0126373_11122344	Not Available	852	Open in IMG/M
3300010048\|Ga0126373_11981841	Not Available	645	Open in IMG/M
3300010048\|Ga0126373_12481964	Not Available	578	Open in IMG/M
3300010358\|Ga0126370_10849984	Not Available	819	Open in IMG/M
3300010361\|Ga0126378_12316264	Not Available	613	Open in IMG/M
3300010366\|Ga0126379_10117957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2403	Open in IMG/M
3300010366\|Ga0126379_12049490	Not Available	674	Open in IMG/M
3300010366\|Ga0126379_12620977	Not Available	602	Open in IMG/M
3300010376\|Ga0126381_104310285	Not Available	551	Open in IMG/M
3300010398\|Ga0126383_11731436	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300011269\|Ga0137392_11482796	Not Available	537	Open in IMG/M
3300011271\|Ga0137393_10795199	Not Available	809	Open in IMG/M
3300011271\|Ga0137393_11270496	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012096\|Ga0137389_11460932	Not Available	579	Open in IMG/M
3300012189\|Ga0137388_11167614	Not Available	707	Open in IMG/M
3300012362\|Ga0137361_10847290	Not Available	830	Open in IMG/M
3300012363\|Ga0137390_10859717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300012971\|Ga0126369_10139605	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300016294\|Ga0182041_11495916	Not Available	621	Open in IMG/M
3300016294\|Ga0182041_11600638	Not Available	601	Open in IMG/M
3300016319\|Ga0182033_10783229	Not Available	839	Open in IMG/M
3300016319\|Ga0182033_10836648	Not Available	812	Open in IMG/M
3300016319\|Ga0182033_11287326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300016341\|Ga0182035_10083451	All Organisms → cellular organisms → Bacteria → Proteobacteria	2289	Open in IMG/M
3300016357\|Ga0182032_10695177	Not Available	853	Open in IMG/M
3300016357\|Ga0182032_10937924	Not Available	737	Open in IMG/M
3300016357\|Ga0182032_11239228	Not Available	643	Open in IMG/M
3300016357\|Ga0182032_11815368	Not Available	533	Open in IMG/M
3300016371\|Ga0182034_10050098	Not Available	2753	Open in IMG/M
3300016371\|Ga0182034_10163679	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300016371\|Ga0182034_11481364	Not Available	594	Open in IMG/M
3300016387\|Ga0182040_10045436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2693	Open in IMG/M
3300016387\|Ga0182040_10083012	All Organisms → cellular organisms → Bacteria → Proteobacteria	2118	Open in IMG/M
3300016404\|Ga0182037_10700435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	867	Open in IMG/M
3300016404\|Ga0182037_10993044	Not Available	731	Open in IMG/M
3300016404\|Ga0182037_11305452	Not Available	640	Open in IMG/M
3300016422\|Ga0182039_10584295	Not Available	974	Open in IMG/M
3300016422\|Ga0182039_11037320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300017930\|Ga0187825_10339513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300017972\|Ga0187781_10795856	Not Available	686	Open in IMG/M
3300021432\|Ga0210384_10562338	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300021476\|Ga0187846_10488577	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300021478\|Ga0210402_10594706	Not Available	1026	Open in IMG/M
3300021479\|Ga0210410_10168070	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300021560\|Ga0126371_10458653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1421	Open in IMG/M
3300024347\|Ga0179591_1182597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1869	Open in IMG/M
3300025548\|Ga0208716_1052239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300025725\|Ga0209638_1158355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300026508\|Ga0257161_1085033	Not Available	654	Open in IMG/M
3300027727\|Ga0209328_10030879	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300027862\|Ga0209701_10119487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1633	Open in IMG/M
3300027882\|Ga0209590_10288857	Not Available	1052	Open in IMG/M
3300028047\|Ga0209526_10281021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. LW3	1131	Open in IMG/M
3300029636\|Ga0222749_10064184	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300031545\|Ga0318541_10514162	Not Available	670	Open in IMG/M
3300031573\|Ga0310915_10443979	Not Available	922	Open in IMG/M
3300031573\|Ga0310915_10720591	Not Available	704	Open in IMG/M
3300031680\|Ga0318574_10956613	Not Available	502	Open in IMG/M
3300031681\|Ga0318572_10676245	Not Available	615	Open in IMG/M
3300031682\|Ga0318560_10566057	Not Available	616	Open in IMG/M
3300031719\|Ga0306917_10777682	Not Available	751	Open in IMG/M
3300031736\|Ga0318501_10159259	Not Available	1166	Open in IMG/M
3300031744\|Ga0306918_10083076	All Organisms → cellular organisms → Bacteria → Proteobacteria	2235	Open in IMG/M
3300031748\|Ga0318492_10196301	Not Available	1032	Open in IMG/M
3300031797\|Ga0318550_10623033	Not Available	518	Open in IMG/M
3300031879\|Ga0306919_10202358	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1477	Open in IMG/M
3300031897\|Ga0318520_10248197	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1062	Open in IMG/M
3300031897\|Ga0318520_10368771	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300031910\|Ga0306923_12273274	Not Available	542	Open in IMG/M
3300031910\|Ga0306923_12366817	Not Available	528	Open in IMG/M
3300031910\|Ga0306923_12501446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031912\|Ga0306921_10727412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300031941\|Ga0310912_10989938	Not Available	645	Open in IMG/M
3300031942\|Ga0310916_11075401	Not Available	669	Open in IMG/M
3300031942\|Ga0310916_11346345	Not Available	586	Open in IMG/M
3300031945\|Ga0310913_10495154	Not Available	868	Open in IMG/M
3300031946\|Ga0310910_10070273	Not Available	2526	Open in IMG/M
3300031946\|Ga0310910_10981445	Not Available	661	Open in IMG/M
3300031947\|Ga0310909_10560624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300031947\|Ga0310909_10847573	Not Available	753	Open in IMG/M
3300031954\|Ga0306926_10091690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3714	Open in IMG/M
3300032001\|Ga0306922_11636114	Not Available	639	Open in IMG/M
3300032059\|Ga0318533_10756236	Not Available	713	Open in IMG/M
3300032066\|Ga0318514_10471125	Not Available	668	Open in IMG/M
3300032066\|Ga0318514_10473958	Not Available	666	Open in IMG/M
3300032076\|Ga0306924_11892177	Not Available	619	Open in IMG/M
3300032261\|Ga0306920_100090650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4514	Open in IMG/M
3300032261\|Ga0306920_101066022	Not Available	1174	Open in IMG/M
3300032261\|Ga0306920_104009325	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.46%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097177

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102066301	3300004633	Tropical Forest Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPDSTSALRESPASLEKVPKETVIAEAKKIVDARAATN*
Ga0066395_106632022	3300004633	Tropical Forest Soil	MAVDTINYNGYRLEVAPVGKGWRVSIYPPASTSALRESPCILEKVPKETVIADAKKIVDARAGSN*
Ga0066670_107250691	3300005560	Soil	MTVENIEYNGYRLEVVPVGKGWRVSIYPPNSTSALRESPSMLEKVPKETVIAEA
Ga0066903_1019862752	3300005764	Tropical Forest Soil	MTAETVDYNGYRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRQLLG*
Ga0066903_1021663423	3300005764	Tropical Forest Soil	ETINYNGYRLEVAPVGKGWRVSIYPPGSTSPLRESPSSLEKVPKETVIAEAKKIVDARAATN*
Ga0066903_1039842712	3300005764	Tropical Forest Soil	MAVEIVNYNGYRLEVVPVGKGWRVSIYPPDSSAALRESPSNLEKVLKETVIAE
Ga0066903_1063029401	3300005764	Tropical Forest Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPDSTSALRESPASLEKVPKETVIAEAKKIVDA
Ga0075521_101851672	3300006642	Arctic Peat Soil	MAESIDYNGYRIDVSPLGKGWRTMIYPPGSKVALPESPSNMERVPKETIIAEAMKIIDARVYPTNR*
Ga0066793_105510281	3300009029	Prmafrost Soil	MAESIDYNGYRIEVSPLGKGWRTMIYPPGSKLALPESPSNMERVPKETIIAEAMKIIDARI*
Ga0099830_104002193	3300009088	Vadose Zone Soil	VETIDYNGYRLEVVPVGKGWRVSIYPPDSTSTLRESPSILEKVPKETVIGEAKKIVDARAATN*
Ga0099830_106392402	3300009088	Vadose Zone Soil	MTVETIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILEKVPKETVIVEAKKIVDARAATN*
Ga0099828_105423601	3300009089	Vadose Zone Soil	MTVENIDYNEYRLEVVPVGKGWRVSIYPPDSTSVLRESPSILEKVPKETVIAEAKKIVDARASTNRDGR*
Ga0099828_117456571	3300009089	Vadose Zone Soil	MTVETIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILGKVPKETVIVEAKKIVDARAATN*
Ga0126373_1001378712	3300010048	Tropical Forest Soil	MALEIVNYNGYRLEVVPVGKGWRVSIYPPDSSSALRESPSTLEKVPKEIVIAQAKKIVDARATTN*
Ga0126373_109642322	3300010048	Tropical Forest Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPASTSALRESPCILEKVPKETVIADAKKIVDARAASN*
Ga0126373_111223442	3300010048	Tropical Forest Soil	MAVEILNYNGYRLEVVPVGKGWRVSIYPPDSTVALRESPSSLEKVLKETVIAEAKKIVDARVANN*
Ga0126373_119818411	3300010048	Tropical Forest Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSSALRESPSTLEKVLKETVISEAKKIVDARAAAN*
Ga0126373_124819641	3300010048	Tropical Forest Soil	MAVEIVNYNGYRLEVVPVGKGWRVSIYSPDSTLALRESPSIVEKVLKETVIAEAKKIVDARAVTHWLAN*
Ga0126370_108499842	3300010358	Tropical Forest Soil	MAVETINYNGYRLEVAPVGNGWRVSIYPPDSTSALRESPASLEKVPKETVIAEAKKIVDARAATN*
Ga0126378_123162641	3300010361	Tropical Forest Soil	YRLEVAPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKKIVDARAATTDES*
Ga0126379_101179573	3300010366	Tropical Forest Soil	NCEGFEGNMAVEILNYNGYRLEVVPVGKGWRVSIYPPDSTAALRESPSSLEKVLKETVIAEAKKIVDARVATN*
Ga0126379_120494902	3300010366	Tropical Forest Soil	MAVEILNYNGYRLEVVPVGKGWRVSIYPPDSTVALRESPSSLEKVLKETVIAEAKKIVDVRVANN*
Ga0126379_126209771	3300010366	Tropical Forest Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARNGTD*
Ga0126381_1043102851	3300010376	Tropical Forest Soil	ILGRYAASDYSRKPMTIETVDYNGYRLEVVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLMG*
Ga0126383_117314362	3300010398	Tropical Forest Soil	MAVETIHYNGYRLEVVPVGKGWRVSFYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD*
Ga0137392_114827961	3300011269	Vadose Zone Soil	MTVENIDYNEYRLEVVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARVSTNSDGR*
Ga0137393_107951992	3300011271	Vadose Zone Soil	MTVENIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILEKVPKEMVIVEAKKIVDARAATN*
Ga0137393_112704962	3300011271	Vadose Zone Soil	MTVENIDYNGYRLEVVPVGKGWRVSIYPPDSTSALRESPFILEKVPKETVIAETKKIVDARASTNRDGR*
Ga0137389_114609322	3300012096	Vadose Zone Soil	MTVETIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILEKVPKETVVVEAKKIVDARAATN*
Ga0137388_111676142	3300012189	Vadose Zone Soil	MTVENIDYNGYRLEVVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIVEAKKIVDARAPTNRDGR*
Ga0137361_108472903	3300012362	Vadose Zone Soil	MTVETIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILEKVPKETVIVEAKKIVDARAAT
Ga0137390_108597171	3300012363	Vadose Zone Soil	MTVENIDYNEYRLEVVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIA
Ga0126369_101396053	3300012971	Tropical Forest Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPGSTSPLRESPSSLEKVPKETVIAEAKKIVDARAATN*
Ga0182041_114959162	3300016294	Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPGSTSPLRESPSSLEKVPKETVIAEAKKIVDARAATN
Ga0182041_116006381	3300016294	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPGSASALRESPSILEKVLKETVVAEAKKIVDARGATD
Ga0182033_107832292	3300016319	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIAEAKKIVDARATRQLLG
Ga0182033_108366481	3300016319	Soil	MTVETVDYNGYRLEIVPVGKGWRVSIYPPDSTSALRDSPSILEKVPKETVIAEAKKIVDARATRPL
Ga0182033_112873261	3300016319	Soil	TMAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0182035_100834514	3300016341	Soil	MVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIPEAKKIDDARATRRLVG
Ga0182032_106951771	3300016357	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVTAEAKRIVDARAATK
Ga0182032_109379242	3300016357	Soil	MAIEIVNYNGYRLEVVPVGKGWRVSIYPPDSTLALRESPSILEKVPKETVIAEAKKIVDARAPRQLMG
Ga0182032_112392281	3300016357	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPAILEKVLKETVIAEAKKIVDARGATD
Ga0182032_118153682	3300016357	Soil	MTVETVDYKGYRLEIVPVGKGWRVSIYPPDSSSALRESPSILEKVPKETVIAEAKKIVDARAT
Ga0182034_100500986	3300016371	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATHPLRG
Ga0182034_101636793	3300016371	Soil	MTVEIINYNGYRFEVVPVGKGWRVSIYPPDSTVALRESPSILEKVPKETVIAEAKKIVDARVATN
Ga0182034_114813642	3300016371	Soil	MTVETVDYKGYRLEIVPVGKGWRVSIYPPDSSSALRDSPSILEKVPKETVIAEAKKIVDARATTN
Ga0182040_100454362	3300016387	Soil	MMVEIVDYNGHRLEIVPVGKAWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLVG
Ga0182040_100830121	3300016387	Soil	MAVETIHYNGYRLEAVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0182037_107004351	3300016404	Soil	MGGPRNLGPATAQSQAASDYSGETMAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0182037_109930441	3300016404	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALCESPSILEKVLKETVIAEAK
Ga0182037_113054521	3300016404	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKK
Ga0182039_105842953	3300016422	Soil	PPQPWSGYRAQSQAASDYSGKTMAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0182039_110373203	3300016422	Soil	MAVEIVDYNGYRLEVAPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKKIVDARAATN
Ga0187825_103395131	3300017930	Freshwater Sediment	DYNGYRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKVVDARAAPN
Ga0187781_107958561	3300017972	Tropical Peatland	MAVETIHYNGYRLEVVPVGKGWRVSIYPPGSASALRESPSILEKVLKETVVAEAKKIVDTRGATD
Ga0210384_105623382	3300021432	Soil	IMAVETIDYNGYRLEVIPVGKGWRVCIYLPGSTLALRESPSILEKVPKEIVIAEAKKIVDARAATN
Ga0187846_104885771	3300021476	Biofilm	FGKTMAVETIHYNRYRLEVVPMRKGWRVSIYPPDSTSALRESPCILEKVLRETVIAEAKEIVDARGATD
Ga0210402_105947063	3300021478	Soil	MAVETINYNGYRLEVVPVGKGWRVSIYPPDSTSALRESPSVLEKVPKETVIAEAKKIVDARASTNRDGN
Ga0210410_101680701	3300021479	Soil	MTVEHIDYNGYRLEVAPVGKGWRVSIYPPDSTSALRESPSVLEKVPKETVIAEAKKIVDARASTNRDGN
Ga0126371_104586533	3300021560	Tropical Forest Soil	MALEIVNYNGYRLEVVPVGKGWRVSIYPPDSSSALRESPSTLEKVPKEIVIAQAKKIVDARATTN
Ga0179591_11825972	3300024347	Vadose Zone Soil	MAVETVDYNGYRLEVVPVGKGWRVSIYPPGSTSALPESPSMLEKVLKETVIAEAKKIVDARAAIKLMGNAP
Ga0208716_10522391	3300025548	Arctic Peat Soil	MAESIDYNGYRIDVSPLGKGWRTMIYPPGSKVALPESPSNMERVPKETIIAEAMKIIDAR
Ga0209638_11583552	3300025725	Arctic Peat Soil	MAESIDYNGYRIEVSPLGKGWRTMIYPPGSKLALPESPSNMERVPKETIIAEAMKIIDAR
Ga0257161_10850332	3300026508	Soil	IMAVETIDYNGYRLEVVPVGKGWRVSIYPPDSTLALRESPSILEKVPKETVIAEAKKIVDARAATN
Ga0209328_100308792	3300027727	Forest Soil	MTVENIDYNGYRLEVVAVGKGWRVSIYPPDSMSALHESPSILEKVPKEIVIAEAKKIVDARAATN
Ga0209701_101194872	3300027862	Vadose Zone Soil	MTAENIDYNGYRLEVVPVGKGWRVSIYPPDSTSTLRESPSILEKVPKETVIGEAKKIVDARAATN
Ga0209590_102888572	3300027882	Vadose Zone Soil	MTVETIDYNGYRLEVVPVGKGWRVSIYAPESTSALRESPSILEKVPKETVIVEAKKIVDARAATN
Ga0209526_102810212	3300028047	Forest Soil	MTVENIDYNGYRLEVVPVGKGWRVSIYPPASTSALRESPSILEKVPKETVIAEAKKIVDARVSTNVDGR
Ga0222749_100641841	3300029636	Soil	MAVETIDYNGYRLEVIPVGKGWRVSIYLPGSTLALRESPSILEKVPKEIVIAEAKKIVDARAATN
Ga0318541_105141622	3300031545	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVD
Ga0310915_104439791	3300031573	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTQEKVLKETVIAEAKRIVYATK
Ga0310915_107205911	3300031573	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIPEAKKIVDARATRRLVG
Ga0318574_109566132	3300031680	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0318572_106762452	3300031681	Soil	VAKLASDYSRKTMTVETVDYNGYRLEIVAVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKRIVDARAATK
Ga0318560_105660571	3300031682	Soil	MAVEIVDYNGYRLEVVPVVKGWRVSIYPPGSSLALRESPSTLEKVLKETVTAEAKRIVDARAATK
Ga0306917_107776821	3300031719	Soil	MVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIPEAKKIVDARATRRLVG
Ga0318501_101592592	3300031736	Soil	MVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIPEAKKIVDARATRRLVG
Ga0306918_100830761	3300031744	Soil	MVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLVG
Ga0318492_101963011	3300031748	Soil	GNNMAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVTAEAKRIVDARAATK
Ga0318550_106230331	3300031797	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTQEKVLKETVIAEAKR
Ga0306919_102023582	3300031879	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLVG
Ga0318520_102481972	3300031897	Soil	MTVETVDYNGYRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLLG
Ga0318520_103687711	3300031897	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVITE
Ga0306923_122732742	3300031910	Soil	KRPLRWGGPRDLGAAIAQSQAASDYSGKTMAVETIHYNGYRPEVVPVGKGWRVSTYPPESALALRESPAILEKVLKETVIAEAKKTVDARGATD
Ga0306923_123668171	3300031910	Soil	MAVETINYNGYRLEVAPVGKGWRVSIYPPDSTSALRESPASLEKVPKETVIAEAKKIVDARAATN
Ga0306923_125014462	3300031910	Soil	MAVEIVDYNGYRLEVAPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAAAKKIVDARAATN
Ga0306921_107274122	3300031912	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKRIVDARAATN
Ga0310912_109899382	3300031941	Soil	RNLGPAPAQSQAGSDYSGRTMAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0310916_110754011	3300031942	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIAEAKKIVDARATRRLVG
Ga0310916_113463451	3300031942	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVITEA
Ga0310913_104951542	3300031945	Soil	MVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIPEAKKIVD
Ga0310910_100702731	3300031946	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRDSPSILEKVPKETVIAEAKKIV
Ga0310910_109814451	3300031946	Soil	DYSRKTMTVETVDYNGYRLEIVPVGKGWRVSIYPPDSSSALRESPSILEKVPKETVIAEAKKIVDARATAN
Ga0310909_105606242	3300031947	Soil	MAVKIVNYNGYRLEVVPVGKGWRVSIYPPDSTLALRESPSILEKVLKETVIAEAKKIVDARAATN
Ga0310909_108475732	3300031947	Soil	MTVETVDYNGYRLEIVPVGKGWRVSIYPPHSTSALRESPSILEKVPKETVIAEAKKIVDA
Ga0306926_100916902	3300031954	Soil	MAVEIVDYNGYRLEVVPVGKGWRVSIYPPGSSLALRESPSTLEKVLKETVIAEAKKIVDARAAAN
Ga0306922_116361141	3300032001	Soil	IHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0318533_107562361	3300032059	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPPDSTSALRESPSILEKVPKETVIAEAKKIVDARATRQ
Ga0318514_104711251	3300032066	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALCESPSILEKVLKETVIAEAKKIVDARGATD
Ga0318514_104739582	3300032066	Soil	MTVETVDYNGYRLEIVPVGKGWRVSIYPPDSTSVLRESPSILEKVPKETVIAEAKKIVDARATRPLRG
Ga0306924_118921771	3300032076	Soil	CRLEVVPVGKGWRVSIYPPDSASALRESPAILEKVLKETVIAEAKKIVDARGATD
Ga0306920_1000906504	3300032261	Soil	MMVEIVDYNGHRLEIVPVGKGWRVSIYPLDSTSALRESPSILEKVPKETVIPEAKKIVDARATRRLVG
Ga0306920_1010660221	3300032261	Soil	AQSQAGSDYSGRTMAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDARGATD
Ga0306920_1040093251	3300032261	Soil	MAVETIHYNGYRLEVVPVGKGWRVSIYPPDSASALRESPSILEKVLKETVIAEAKKIVDA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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