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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F097113 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 104 |
| Average Sequence Length | 49 residues |
| Representative Sequence | LTAIQATSGQFQITGFGYEINDSLTDAYVVVTVRINEHHYKAAVNSV |
| Number of Associated Samples | 99 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 99.04 % |
| % of genes from short scaffolds (< 2000 bps) | 92.31 % |
| Associated GOLD sequencing projects | 94 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.23 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (89.423 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (14.423 % of family members) |
| Environment Ontology (ENVO) | Unclassified (35.577 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (33.654 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.23 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF10124 | Mu-like_gpT | 1.92 |
| PF08291 | Peptidase_M15_3 | 0.96 |
| PF01541 | GIY-YIG | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 89.42 % |
| All Organisms | root | All Organisms | 10.58 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 14.42% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 9.62% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 9.62% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 8.65% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 6.73% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 4.81% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 3.85% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 3.85% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 3.85% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 3.85% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 3.85% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 2.88% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 1.92% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 1.92% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 1.92% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 1.92% |
| Hypersaline | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline | 1.92% |
| Polar Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine | 1.92% |
| Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment | 0.96% |
| Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 0.96% |
| Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 0.96% |
| Freshwater, Surface Ice | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice | 0.96% |
| Freshwater | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater | 0.96% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 0.96% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.96% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 0.96% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.96% |
| Freshwater And Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine | 0.96% |
| Hypersaline Lake Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 0.96% |
| Hydrocarbon Resource Environments | Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments | 0.96% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000928 | Marine plume microbial communities from the Columbia River - 25 PSU | Environmental | Open in IMG/M |
| 3300001460 | Marine viral communities from the Pacific Ocean - LP-28 | Environmental | Open in IMG/M |
| 3300001523 | Hypersaline microbial communities from Lake Vida, Antarctica - Brine Hole Two >0.2 micron | Environmental | Open in IMG/M |
| 3300001605 | Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin | Engineered | Open in IMG/M |
| 3300003393 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD | Environmental | Open in IMG/M |
| 3300005580 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
| 3300007622 | Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02 | Environmental | Open in IMG/M |
| 3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
| 3300008120 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA | Environmental | Open in IMG/M |
| 3300009009 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 | Environmental | Open in IMG/M |
| 3300009051 | Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 | Environmental | Open in IMG/M |
| 3300009152 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG | Environmental | Open in IMG/M |
| 3300009159 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG | Environmental | Open in IMG/M |
| 3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
| 3300009497 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 | Environmental | Open in IMG/M |
| 3300010157 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG | Environmental | Open in IMG/M |
| 3300010370 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA | Environmental | Open in IMG/M |
| 3300010883 | western Arctic Ocean co-assembly | Environmental | Open in IMG/M |
| 3300011253 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate | Environmental | Open in IMG/M |
| 3300011334 | Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung | Environmental | Open in IMG/M |
| 3300012413 | Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012418 | Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012666 | Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2 | Environmental | Open in IMG/M |
| 3300012764 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES155 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300013126 (restricted) | Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m | Environmental | Open in IMG/M |
| 3300017706 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG | Environmental | Open in IMG/M |
| 3300017723 | Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N | Environmental | Open in IMG/M |
| 3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
| 3300017752 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22 | Environmental | Open in IMG/M |
| 3300017754 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D | Environmental | Open in IMG/M |
| 3300017766 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D | Environmental | Open in IMG/M |
| 3300017774 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D | Environmental | Open in IMG/M |
| 3300017780 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N | Environmental | Open in IMG/M |
| 3300017963 | Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG | Environmental | Open in IMG/M |
| 3300020162 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1 | Environmental | Open in IMG/M |
| 3300020205 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1 | Environmental | Open in IMG/M |
| 3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
| 3300022176 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2) | Environmental | Open in IMG/M |
| 3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
| 3300022179 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N | Environmental | Open in IMG/M |
| 3300022407 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D | Environmental | Open in IMG/M |
| 3300024549 | Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8d (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024860 | Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8d (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024864 | Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300025098 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025135 | Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes) | Environmental | Open in IMG/M |
| 3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
| 3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
| 3300025732 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025869 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes) | Environmental | Open in IMG/M |
| 3300025872 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026571 | Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300026573 | Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300027139 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h | Environmental | Open in IMG/M |
| 3300027142 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h | Environmental | Open in IMG/M |
| 3300027196 | Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes) | Environmental | Open in IMG/M |
| 3300027578 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h | Environmental | Open in IMG/M |
| 3300027743 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027754 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027762 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027793 | Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027892 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300027975 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300028076 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 10R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300028392 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2) | Environmental | Open in IMG/M |
| 3300029349 | Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103 | Environmental | Open in IMG/M |
| 3300029697 | Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8h (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031540 | Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_544_20m (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031571 | Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_535_32.3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031608 | Marine microbial communities from water near the shore, Antarctic Ocean - #1 | Environmental | Open in IMG/M |
| 3300031628 | Marine microbial communities from water near the shore, Antarctic Ocean - #229 | Environmental | Open in IMG/M |
| 3300031629 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80 | Environmental | Open in IMG/M |
| 3300031645 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #129 | Environmental | Open in IMG/M |
| 3300031669 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-1 | Environmental | Open in IMG/M |
| 3300031758 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123 | Environmental | Open in IMG/M |
| 3300031774 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915 | Environmental | Open in IMG/M |
| 3300031963 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116 | Environmental | Open in IMG/M |
| 3300032011 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416 | Environmental | Open in IMG/M |
| 3300032053 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16 | Environmental | Open in IMG/M |
| 3300032118 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15 | Environmental | Open in IMG/M |
| 3300032177 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0 | Environmental | Open in IMG/M |
| 3300032516 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0 | Environmental | Open in IMG/M |
| 3300033981 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011 | Environmental | Open in IMG/M |
| 3300033995 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056 | Environmental | Open in IMG/M |
| 3300034022 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058 | Environmental | Open in IMG/M |
| 3300034061 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028 | Environmental | Open in IMG/M |
| 3300034062 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045 | Environmental | Open in IMG/M |
| 3300034071 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110 | Environmental | Open in IMG/M |
| 3300034095 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091 | Environmental | Open in IMG/M |
| 3300034104 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120 | Environmental | Open in IMG/M |
| 3300034107 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133 | Environmental | Open in IMG/M |
| 3300034109 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158 | Environmental | Open in IMG/M |
| 3300034117 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124 | Environmental | Open in IMG/M |
| 3300034122 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181 | Environmental | Open in IMG/M |
| 3300034279 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163 | Environmental | Open in IMG/M |
| 3300034418 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| OpTDRAFT_102126432 | 3300000928 | Freshwater And Marine | APGGSTAVGLSATKLTAIQATQAQFQITGIAGGVDNALTDAFVTVTVRMNEAQYKAPVASV* |
| JGI24003J15210_100537381 | 3300001460 | Marine | VGLSTTSLTVLQGTSGQFQITGVAGGADNALTDAYVDVTVRINEMQYNAAVNTIS* |
| JGI1221J15618_10351151 | 3300001523 | Hypersaline | TSQLTVLQATSGQFQITGFSGNVNDSITDAFAVVTVRINEHQYKASVNSVG* |
| JGI1221J15618_10351169 | 3300001523 | Hypersaline | TVLQATSGQFQITGFSGNVNDSITDAFAVVTVRINEHQYKASVNSVG* |
| Draft_104366441 | 3300001605 | Hydrocarbon Resource Environments | STRTGLSNTKLSVIQATSGQFQITGWAYNINDSLTDAYVVATVRINEHHYKAAVNSV* |
| JGI25909J50240_10969381 | 3300003393 | Freshwater Lake | STCQLTAIQATSGQFQITGFANSIFDSITDAYVQVTVRINEHHYKAAVNSV* |
| Ga0049083_103045012 | 3300005580 | Freshwater Lentic | ATGLSNTQIGVIETTSGQFQLTGFGGEINDSITDAYIVAIVRINEHIYKAAVNSI* |
| Ga0098048_12026052 | 3300006752 | Marine | TAIQTTQGQFQITGFEGTTGGPNSTLTDAFVVATVRINESQYKAPVNSV* |
| Ga0070749_107861332 | 3300006802 | Aqueous | FQITGWGYNINDSLTDAYVVATVRINEHQYKASVNSV* |
| Ga0070754_103436862 | 3300006810 | Aqueous | VPTAPGGSTAVGLSATKLTAIQATQAQFQITGIAGGVDNALTDAFVTVTVRMNEAQYKAPVASV* |
| Ga0102863_10610122 | 3300007622 | Estuarine | TGFEGNVNDSLTDAYIVATVRINEHAYKAPVNSI* |
| Ga0102863_12492211 | 3300007622 | Estuarine | GGSTSTGLSTTYLSAIVATSGQFQITGFAGNINDSLTDAYVVATVRINEHHYKAAVNSV* |
| Ga0070751_13043832 | 3300007640 | Aqueous | STQTGLSNTQLTVIQATSGQFQITGFGYNINDSLTDAYVVVTVRINEHHYKAAVNSV* |
| Ga0114355_11290332 | 3300008120 | Freshwater, Plankton | QFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV* |
| Ga0105105_101578191 | 3300009009 | Freshwater Sediment | STQLGVIQATAGQFQITGFGNEITDSLTDAYIVAIVRINEHQYKAAVNSI* |
| Ga0102864_11450261 | 3300009051 | Estuarine | SGQFQITGFEGNVNDSLTDAYIVATVRINEHAYKAPVNSI* |
| Ga0114980_107444811 | 3300009152 | Freshwater Lake | ATSGQFQITGFQGNITDSLTDAYVVVTVRINEHHYKAAVNSV* |
| Ga0114978_107774052 | 3300009159 | Freshwater Lake | SGQFQITGLGYEINDSLTDAYAVVTVRINEHHYKAAVNSV* |
| Ga0114915_10607662 | 3300009428 | Deep Ocean | LTAIQATSGQYQITGVAGGPNNLITDAFVKVSVRINEHQYKAAVNSV* |
| Ga0115569_105090491 | 3300009497 | Pelagic Marine | TSVGLSTTSLTAIQATSAQFQITGIAGGVDNALTDAYVTVTVRINESQYKAAVNSV* |
| Ga0114964_100197901 | 3300010157 | Freshwater Lake | TSGQFQMTGFAGEINDSLTDAYIVVIVRINEHIYKASVNSI* |
| Ga0129336_101886811 | 3300010370 | Freshwater To Marine Saline Gradient | QTGLSNCQLTAIQATSGQFQITGFAYNINDSLTDAYVQVTVRINEHHYKAAVNSV* |
| Ga0133547_111704741 | 3300010883 | Marine | TATGLSSTSLTAIQTTSGQYQITGIAGGPNNLITDAFVKVSVRINEHQFKAAVNSV* |
| Ga0151671_11147972 | 3300011253 | Marine | LSSTSLTAIQTTQGQFQITGISGGVDNALTDAYVNVTVRINEMQYNAAVNSV* |
| Ga0153697_158819 | 3300011334 | Freshwater | STATGLSNTQIGVIEATSGQFQLTGFAGEINDSITDAYNVVIVRINEHIYKAAVNSI* |
| Ga0138258_14449711 | 3300012413 | Polar Marine | QYQITGVAGGPNNLITDAFVVVTVRINEHQYKASVASV* |
| Ga0138261_12605521 | 3300012418 | Polar Marine | AIQAGTGQYQITGVAGGPNNLITDAFVVVTVRINEHQYKASVASV* |
| Ga0157498_10188912 | 3300012666 | Freshwater, Surface Ice | LTAIQATSGQFQITGFGYEINDSLTDAYVVVTVRINEHHYKAAVNSV* |
| Ga0157624_12049601 | 3300012764 | Freshwater | SPGGSTQTGLSTCQLTAIQATSGQFQITGFAYNINDSLTDAYVQVTVRLNEAAYKAPVNSI* |
| (restricted) Ga0172367_101453033 | 3300013126 | Freshwater | TAIQATSGQFQITGFAYNINDSLTDAYVQVTVRINEHAYKAAVNSI* |
| Ga0181377_10821632 | 3300017706 | Marine | LSAIQATSGQFQITGFEGTTGGVDSTLTDAFVVATVRINEHQYKAAVNSV |
| Ga0181362_11237161 | 3300017723 | Freshwater Lake | ATGLSTTVLSVIQATSGQFQITGFANSIFDSITDAYVQVTVRINEHHYKAAVNSV |
| Ga0181399_11259582 | 3300017742 | Seawater | GSTSVGLSTTSLTAIQATSAQFQITGIAGGVDNALTDAYVTVTVRINESQYKAAVNSV |
| Ga0181400_10653742 | 3300017752 | Seawater | SLTAIQATSAQFQITGIAGGVDNALTDAYVTVTVRINESQYKAAVNSV |
| Ga0181344_12268522 | 3300017754 | Freshwater Lake | EDSPGGSTATGLSNTVLSAIQATSGQFQITGFQGNIDDSLTDAYVVVTVRINEHQYKAPVNSI |
| Ga0181343_11645162 | 3300017766 | Freshwater Lake | STSTGLSTTQLGVIEATSGQFQITGFANNINDSITDAYIVAMCRINEHAYKAAVNSI |
| Ga0181358_11382041 | 3300017774 | Freshwater Lake | QFQLTGFAGDINDSLTDAYIVAIVRINEHQYKAAVNSI |
| Ga0181346_11467921 | 3300017780 | Freshwater Lake | PGGSTATGLSTTVLSVIQATSGQFQITGFQGNITDSLTDAFVVVTVRINEHHYKAAVNSV |
| Ga0180437_101997943 | 3300017963 | Hypersaline Lake Sediment | GLSNTKLTAIQATSGQFQITGFANNVNDALTDAYVTVTVRINEHHYKASVNSI |
| Ga0211735_104633471 | 3300020162 | Freshwater | SGQFQITGFAYNINDSLTDAYVVATVRINEHHYKAAVNSV |
| Ga0211731_102075251 | 3300020205 | Freshwater | TAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAAVNSV |
| Ga0222713_104056002 | 3300021962 | Estuarine Water | PFQITGWGYNINDSLTDAYVVATVRINEHQYKASVNSV |
| Ga0222713_107925351 | 3300021962 | Estuarine Water | GQFQITGSAYLVTDSLTDAYVSMTVRLNEAAYKAPVNAI |
| Ga0212031_10374522 | 3300022176 | Aqueous | ATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0196887_11231451 | 3300022178 | Aqueous | FQITGFSGNINDSLTDAYVVATVRINEHAYKAAVNSI |
| Ga0181353_11550652 | 3300022179 | Freshwater Lake | TGLSNTFLTAIVATSGQFQITGFEGNVNDSLTDAYVVVTVRINEHAYKAAVNSI |
| Ga0181351_12520802 | 3300022407 | Freshwater Lake | ATSGQFQITGFGYNINDSLTDAYVVVTVRINEHHYKAAVNSV |
| Ga0256308_10375811 | 3300024549 | Freshwater | ALVATSGQFQITGSAYLITDSLTDAYVSMTVRLNEAAYKAPVNAI |
| Ga0256344_11259452 | 3300024860 | Freshwater | GGSTQTGLSNCQLTVIQSTSGQFQITGFAYSIFDSLTDAYVQVTVRINEHHYKAAVNSV |
| Ga0255271_10790151 | 3300024864 | Freshwater | SNCQLTAIQATSGQFQITGFAYNINDSLTDAYVQVTVRINEHAYKAAVNSI |
| Ga0208434_10971402 | 3300025098 | Marine | AIQTTQGQFQITGFEGTTGGPNSTLTDAFVVATVRINESQYKAPVNSV |
| Ga0209498_11129792 | 3300025135 | Sediment | LTALQGTSGQFQITGFAPRVGDTLTDAYVVATVRMNEAHYKASVNTIA |
| Ga0208643_11042601 | 3300025645 | Aqueous | QSTSGQFQITGFGYNINDSLTDAYVTATVRINEHAYKAAVNSI |
| Ga0208134_10874541 | 3300025652 | Aqueous | AIQATSAQFQITGIAGGVDNALTDAYVTVTVRINESQYKAAVNSV |
| Ga0208784_11144491 | 3300025732 | Aqueous | QATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0209308_103098792 | 3300025869 | Pelagic Marine | SPGGSTSVGLSTTSLTAIQATSAQFQITGIAGGVDNALTDAYVTVTVRINESQYKAAVNS |
| Ga0208783_100707161 | 3300025872 | Aqueous | QTGLSNCQLTAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0255289_10974591 | 3300026571 | Freshwater | ITGFAYNINDSLTDAYVQVTVRINEHAYKAAVNSI |
| Ga0255269_10901651 | 3300026573 | Freshwater | QFQITGFGYNINDSLTDAYVTATVRINEHAYKAAVNSI |
| Ga0255082_10444892 | 3300027139 | Freshwater | GLSNTYLTAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0255065_10024011 | 3300027142 | Freshwater | TQTGLSNTYLTAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0208438_10827941 | 3300027196 | Estuarine | TYLTAIQATSGQFQITGLGFEINDSLTDAYAVVSVRINEHHYKAAVNSV |
| Ga0255075_10835671 | 3300027578 | Freshwater | AIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0209593_102454812 | 3300027743 | Freshwater Sediment | LTAIQSTSGQFQITGFAYNINDSLTDAYVTVTVRLNEAAYKAAVNSI |
| Ga0209596_12392422 | 3300027754 | Freshwater Lake | AGISSTYLSALVATSGQFQITGSAYLVTDSLTDAYVSMTVRLNEAAYKAPVNAI |
| Ga0209288_100619991 | 3300027762 | Freshwater Sediment | STQLGVIQATAGQFQITGFGNEITDSLTDAYIVAIVRINEHQYKAAVNSI |
| Ga0209972_102261041 | 3300027793 | Freshwater Lake | TSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0209550_105494081 | 3300027892 | Freshwater Lake | GGSTQTGLSNCQLTAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0209391_102928232 | 3300027975 | Freshwater Sediment | PGGSTATGLSNTKLSVIQATSGQFQITGFGYNVNDSITDAYVVATVRINEHHYKAAVNSV |
| Ga0247562_10326062 | 3300028076 | Seawater | GQFQITGFEGTTGGVDSTLTDAFVVATVRINEHQYKAAVNSV |
| Ga0304729_10785691 | 3300028392 | Freshwater Lake | TSGQFQMTGFAGEINDSLTDAYIVVIVRINEHIYKASVNSI |
| Ga0238435_1173972 | 3300029349 | Freshwater | STTQLSAIQATSGQFQITGFAYNINDSLTDAYVVATVRINEHHYKAPVNSI |
| Ga0256301_10191021 | 3300029697 | Freshwater | STQTGLSNCQLTAIQATSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAPVNSV |
| Ga0308143_1056972 | 3300031540 | Marine | LSSTSLTAIQTTSGQYQITGVAGGPNNLITDAFVKVSVRINEHQYKAAVNSV |
| Ga0308141_10638412 | 3300031571 | Marine | LTAIQATSGQFQITGFSGNVEDALTDAYIVATVRINEHAYKAAVNSV |
| Ga0307999_10836842 | 3300031608 | Marine | APGGRTATGLSSTSLTAIQATSGQYQITGVAGGPNNLITDAFVVVTVRINEHQYKAPVNS |
| Ga0308014_11222571 | 3300031628 | Marine | GLTATGLSATRLTAIQAGTGQYQITGVAGGPNNLITDAFVKVSVRINEHQYKASVASV |
| Ga0307985_102502301 | 3300031629 | Marine | LTAIQATSGQYQITGVAGGPNNLITDAFVKVSVRINEHQYKASVNSI |
| Ga0307990_11584411 | 3300031645 | Marine | WTVATPGGSTATGLSTTSLTAIQAGTGQYQITGVAGGPNNLITDAFVKVSVRINEHQYKASVASV |
| Ga0307375_108249451 | 3300031669 | Soil | SGQFQITSFAYGVDNALTDAYVVATVRINEHHYKASVNSV |
| Ga0315907_106602221 | 3300031758 | Freshwater | GLSTTQLTAIQSTSGQFQITGFAYNINDSLTDAYVTVTVRLNEAAYKAAVNSI |
| Ga0315907_110760652 | 3300031758 | Freshwater | STRTGLSNTSLTVIQSTSGQFQITGFAGNINDSLTDAYIVATVRINEHQYKASVNSV |
| Ga0315907_111611781 | 3300031758 | Freshwater | RTGLSNCQLTAIQSTSGQFQITGFAYSIFDSITDAYVQVTVRINEHHYKAAVNSV |
| Ga0315331_105062211 | 3300031774 | Seawater | ATSGQFQITGFEGTTGGVDSTLTDAFVVATVRINEHQYKAAVNSV |
| Ga0315901_106185523 | 3300031963 | Freshwater | TSTGLSTTQIGVIETTSGQFQLTGFGNEVGDSITDAYIVAIVRINEHQYKASVNSI |
| Ga0315316_100240191 | 3300032011 | Seawater | QITGFEGTTGGPNSTLTDAYVVATVRINESQYKAPVNSV |
| Ga0315284_124340002 | 3300032053 | Sediment | VIEATSGQFQLTGFGGEINDSITDAYIVAIVRINEHIYKAAVNSI |
| Ga0315277_117743622 | 3300032118 | Sediment | MTGFAGEINDSITDAYNVVIVRINEHIYKAAVNSI |
| Ga0315276_112580551 | 3300032177 | Sediment | TATGLSNTVLSVIQATSGQFQITGFQGNITDSLTDAYVVVTVRINEHHYKAAVNSV |
| Ga0315273_114486552 | 3300032516 | Sediment | GQFQLTGFGGEINDSITDAYIVAIVRINEHIYKAAVNSI |
| Ga0334982_0442198_2_118 | 3300033981 | Freshwater | QFQITGFAYSIFDSLTDAYVQVTVRINEHHYKAAVNSV |
| Ga0335003_0457990_2_181 | 3300033995 | Freshwater | GGSTQTGLSNTYLTAIQATSGQFQITGFGYEINDSLTDAYVVVTVRINEHHYKAAVNSV |
| Ga0335005_0253943_881_1063 | 3300034022 | Freshwater | GGSTSTGISSTYLTAEVATSGQFQITGYAYLITDSATDAYVNMTVRLNESQYKAPVNSVS |
| Ga0334987_0041266_3791_3919 | 3300034061 | Freshwater | ATSGQFQITGSAYLITDSLTDAYVSMTVRLNEAAYKAPVNAI |
| Ga0334995_0651935_3_149 | 3300034062 | Freshwater | QLTAIQATSGQFQITGFAYNINDSLTDAYVQVTVRLNEAAYKAPVNSI |
| Ga0335028_0747816_2_148 | 3300034071 | Freshwater | YLTAIQATSGQFQITGFGYEITDSLTDAYVVVSVRINEHHYKAAVNSV |
| Ga0335022_0045095_3_158 | 3300034095 | Freshwater | SNTQIGVIEATSGQFQLTGFGGEINDSLTDAYIVAIVRINEHIYKAAVNSI |
| Ga0335031_0374341_708_899 | 3300034104 | Freshwater | VASPGGSTRTGLSNTQLGVIQATSGQFQITGFAYNINDSITDAYIVATVRINEHHYKAAVNSV |
| Ga0335037_0289081_3_137 | 3300034107 | Freshwater | SATSGQFQITGYAYLVTDSPTDAFVNMSVRLNESQYKAPVNSVS |
| Ga0335051_0162852_2_184 | 3300034109 | Freshwater | PGGSTQTGLSNCQLTAIQATSGQFQITGFAYSIFDSLTDAYVQVTVRINEHHYKAAVNSV |
| Ga0335033_0489310_409_567 | 3300034117 | Freshwater | LSNTQIGVIEATSGQFQLTGFGGEINDSLTDAYIVAIVRINEHIYKAAVNSI |
| Ga0335060_0337067_680_814 | 3300034122 | Freshwater | IEATSGQFQLTGFGGEINDSLTDAYIVAIVRINEHIYKAAVNSI |
| Ga0335052_0665762_3_179 | 3300034279 | Freshwater | GSTQTGLSTCQLTAIQATSGQFQITGFAYNINDSLTDAYVQVTVRLNEAAYKAPVNSI |
| Ga0348337_171895_2_172 | 3300034418 | Aqueous | TQTGLSNTQLTVIQATSGQFQITGFGYNINDSLTDAYVVVTVRINEHHYKAAVNSV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |