Basic Information | |
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Family ID | F097073 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 55 residues |
Representative Sequence | MAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Number of Associated Samples | 75 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 21.05 % |
% of genes near scaffold ends (potentially truncated) | 11.54 % |
% of genes from short scaffolds (< 2000 bps) | 18.27 % |
Associated GOLD sequencing projects | 70 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.58 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (84.615 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.846 % of family members) |
Environment Ontology (ENVO) | Unclassified (42.308 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (51.923 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Vadose Zone Soil Tropical Forest Soil Agricultural Soil Soil Grasslands Soil Soil Soil Tropical Forest Soil Corn, Switchgrass And Miscanthus Rhizosphere Miscanthus Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066683_102536601 | 3300005172 | Soil | DGGTLRTIGEACEYMAAIGKEREQRRHWQQVRELMLQEADVAAVSRRVRLAVLKDAKLDVSALSEPLR* |
Ga0066388_1028722151 | 3300005332 | Tropical Forest Soil | IGKERELRPHWQQVRELMLQETDVGAVSWRVRLAVLKDAKLDVSALSEPLR* |
Ga0066388_1036031292 | 3300005332 | Tropical Forest Soil | MAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0066388_1043509481 | 3300005332 | Tropical Forest Soil | LAAIGKERRLRWHQVRNLMLEEANVESVSWYVRLAVLKDAKLDVSKTPAE* |
Ga0066388_1057271471 | 3300005332 | Tropical Forest Soil | MAAISRKREQRRHWEQVRELIHQEADVDAVSWQLRLAILKDAKLVLSALS* |
Ga0066388_1061815201 | 3300005332 | Tropical Forest Soil | VPPGLLVAADSLRTILEACEYMAAIGKERELRPHWQQIRELMLREADVAAVTWRVRLAVLKDAKLDVSALLSEPLT* |
Ga0066388_1080886022 | 3300005332 | Tropical Forest Soil | KDGGTLRTILEACEYMAAIGKERELRPHWQQVRELMLQELDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0070713_1021124312 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLDV |
Ga0070707_1005130792 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAISKEREQRRHWQQVRELIDQEADVDAVSWDLRIAVLKDAKLDVAAMA* |
Ga0066692_103025712 | 3300005555 | Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLDVSALSEPPT* |
Ga0066905_1005986933 | 3300005713 | Tropical Forest Soil | MAAIGNERELRPHWQRVRELMLQEADVAALSSRVRLAVLKDAKL |
Ga0066905_1022847422 | 3300005713 | Tropical Forest Soil | QQVRELIDQEADVDAISWKLRLAILKDAKLDVSKVPAK* |
Ga0066905_1022939502 | 3300005713 | Tropical Forest Soil | VSYVRIGRVRELIDQEADVDAVSWKLRLAILKDAKLDVSKVLAK* |
Ga0066903_1004276744 | 3300005764 | Tropical Forest Soil | MAAISEEREQRRHWQQVRELIDQEADVAAVSWKLPLAILKDAKLDVSKVPAK* |
Ga0066903_1007718771 | 3300005764 | Tropical Forest Soil | MAAISNEREQRRHWQQVRELIDQEADVDAISWKLRLAILKDAKLDVSKVPAK* |
Ga0066903_1042669982 | 3300005764 | Tropical Forest Soil | ILEACEYMAAIGKERALRPHWQQVRELMLQEPDVAAVSWQLRLAVLKDAKLDVSKVPAK* |
Ga0066903_1056758101 | 3300005764 | Tropical Forest Soil | QQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0066903_1065919772 | 3300005764 | Tropical Forest Soil | MAAIGKERELRPHWQQIRELMLREADVAAVTWRVRLAVLKDAKLDVSALLSEPLT* |
Ga0066903_1083369271 | 3300005764 | Tropical Forest Soil | MAAIGKERELRPHWQRVRELMLQEADVAALSSRVRLAVLKDAKL |
Ga0079222_123016701 | 3300006755 | Agricultural Soil | HNSGSAIGKERELRRHWQQVAKLILEEADVASVSWQLRLALLKDAKLDVAKMPA* |
Ga0066665_113781032 | 3300006796 | Soil | MAAIGKQRELRRHWQHVRKLILEEADVVAVSWQLRLAVLKDAKLDVAADQAIGKE |
Ga0066665_114685481 | 3300006796 | Soil | MAAIGEERELRPHCQRVRELMLQEADVAALSSRVQLAVLKDAKLD |
Ga0099791_101548882 | 3300007255 | Vadose Zone Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLEASALSHAPT* |
Ga0105242_109889432 | 3300009176 | Miscanthus Rhizosphere | MAAIGKEREQRLHWQRVREVMLQEADEAAVTWRVQLAVLKDAKLDVTALSEPIERMIGE |
Ga0126380_113295672 | 3300010043 | Tropical Forest Soil | MAAIGKERELRPHWKQVRELMLQEADAAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0126384_102154292 | 3300010046 | Tropical Forest Soil | MAAISEVRAQRPHWHQVRKLILEEADVAAVSWQLRLALLKDAKFDLAATFA* |
Ga0126384_114155642 | 3300010046 | Tropical Forest Soil | LRTIQQGCQYMAAISKEREQRRHWQQVRELIDQEADVDAVSWKLRIAVLKDAKLVGTRPQAAAE* |
Ga0126373_112009543 | 3300010048 | Tropical Forest Soil | GTLRTILEACEYMAAIGKERELRPHWQQVRELMLQEPDVAAISWQVRLAVLKDAKLDVSKVPAK* |
Ga0099796_104385781 | 3300010159 | Vadose Zone Soil | TKDGGTLHTIQEAWEYMAAISKEREQRRHWQQVRKMILDEEANMAAVSWQLRLAVLKDAKLDVTKMGT* |
Ga0126370_114545053 | 3300010358 | Tropical Forest Soil | ACEYMAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0126370_122299762 | 3300010358 | Tropical Forest Soil | AIGNERELRPHWLQIRELMLQEADVAAVTWRVRLAVLKDAKLDVSALLSEPLT* |
Ga0126381_1023081693 | 3300010376 | Tropical Forest Soil | MLQEPDVTAVSWQVRLAALKDAKLAKLDVSKVPAKCV |
Ga0126381_1024684102 | 3300010376 | Tropical Forest Soil | TLRTILEACEYMAAIGKERELRPHWQQVRELMLQEPDVTAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0126383_121227932 | 3300010398 | Tropical Forest Soil | LRPHWRQVRELMLQEAEVAAVSWQVRLAVLKDAKLDVSALLEPLT* |
Ga0126383_121272002 | 3300010398 | Tropical Forest Soil | MVAIGKERELRPHWQQVRELMLQEAEVAAVSWRVRLAVLKDAKLDVSALSEPFT* |
Ga0126383_133836961 | 3300010398 | Tropical Forest Soil | TILEACEYMAAIGKERELRSHWQQVRELIDQEADVDAVSWKLRLAILKDAKLDVSKVPVK |
Ga0124844_10154225 | 3300010868 | Tropical Forest Soil | MAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVP |
Ga0137391_113236102 | 3300011270 | Vadose Zone Soil | RVKEREQRRHWQQVRKMILDEEANMAAVSWQLRLAVLKDAKLDVTKMGT* |
Ga0137383_112545131 | 3300012199 | Vadose Zone Soil | QRMAARRVLELRPHWQRVRELMLQEAEVAAVSWQVRLAALKDAKLDVSALSEPLR* |
Ga0137365_100884395 | 3300012201 | Vadose Zone Soil | MAAIGKERELRRHWQQVRELMLQEADVAALSSRLRLAVLKDAKLDVTALSEP* |
Ga0137363_104094331 | 3300012202 | Vadose Zone Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKL |
Ga0137363_106908231 | 3300012202 | Vadose Zone Soil | TIGKERELRPHWHQVRELMLQEAEVAAVSSQVRLAVLKDAKLDVSALSKPLT* |
Ga0137363_110155091 | 3300012202 | Vadose Zone Soil | MTAISKEREQRRHWQQVRKMILDEEANMAAVTWQLRLAVLKDAKLDLTKMPV* |
Ga0137380_100454052 | 3300012206 | Vadose Zone Soil | MAAISKEREQRRHWQQVRELIDQEADVDAVSWNLRIAVLKDAKLDVAAMA* |
Ga0137379_116746091 | 3300012209 | Vadose Zone Soil | CEYMAAIGRERELRRHPQHVRKQILEEADVAAVSWQLRLAILKDAKLDVSASCSWIGGRPC* |
Ga0137367_107713474 | 3300012353 | Vadose Zone Soil | MAAIGKERELRRHWQQVRELMLQEADVAAVSRQFRLAVLKDAKVDVTALS |
Ga0137360_100607785 | 3300012361 | Vadose Zone Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRARLAVLKDAKLDVSALSEPPT* |
Ga0137360_106016861 | 3300012361 | Vadose Zone Soil | LTRPLPTKDGGTLRTIKTCAAIGKEREQRPRWQQVRQVILEEADAAALSCQIRLAVLKHAKLDVSGMNT* |
Ga0137358_104736161 | 3300012582 | Vadose Zone Soil | FRASNAHCAKAPCTGGMLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLDVSALSEPPT* |
Ga0137359_108461201 | 3300012923 | Vadose Zone Soil | ISKEREQRRHWQQVRKMILDEEANMAAVTWQLRLAVLKDAKLDLTKMPV* |
Ga0126375_104763941 | 3300012948 | Tropical Forest Soil | DGGTLRTIQQGCQYMAAISKEREQRRHWQQVRELIDQEADVDAVSWKLRIAVLKDAKLVGTRPQAAAE* |
Ga0126369_100967521 | 3300012971 | Tropical Forest Soil | PTKDGGTLRTIFEACEYMAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0126369_109895761 | 3300012971 | Tropical Forest Soil | LRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK* |
Ga0182041_116387261 | 3300016294 | Soil | ACEYMAAIGKERELRPHWQQVRELMLQEADVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0182041_116794931 | 3300016294 | Soil | TILEACEYMAAIGKERQLRPHWQQVRELMLQEAEVAAVSWRVWLSVLKDGKLDVSALSEPLT |
Ga0182033_109888272 | 3300016319 | Soil | TKDGGTLRTILEACEYMAAIGKERELRPHWQQVRELLLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0182035_118809241 | 3300016341 | Soil | AIGKERELRPHWQQVGELIDQEADVDAVSWQVRLAVLKDAKLDVSKVPTK |
Ga0182032_101155627 | 3300016357 | Soil | TILEACEYMAAIGKERELRPHWLQIRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0182039_108244822 | 3300016422 | Soil | LRTILEACEYMAAIGKERELRRHWQQVRELLLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0066662_107405462 | 3300018468 | Grasslands Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLDVSALSEPPT |
Ga0126371_104139793 | 3300021560 | Tropical Forest Soil | MAVISKEREQRTHWRQIRELIDQEADVDAVSWKLRLAILKDAKLDVSKVRAK |
Ga0126371_108903273 | 3300021560 | Tropical Forest Soil | LRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0126371_125522612 | 3300021560 | Tropical Forest Soil | MAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0207646_103960222 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAISKEREQRRHWQQVRELIDQEADVDAVSWDLRIAVLKDAKLDVAAMA |
Ga0209577_104649153 | 3300026552 | Soil | MLRTILEACEYMAAIGKERELRPHWQQVRELMLQEVDVAAVSWRVRLAVLKDAKLDVS |
Ga0209588_12034781 | 3300027671 | Vadose Zone Soil | VEDGGTLRTIQHVCDYMAAIGKEREQRRHWQQVRQLILGEADASVVSWQIRLAVLKDAKLDVSATNT |
Ga0318534_105527281 | 3300031544 | Soil | KEREQRRHWQQVCELIDQEADVDAVSWKLRIAVLKDAKLDVAAMT |
Ga0318541_107613853 | 3300031545 | Soil | GKERELRPHWHQVRELMLQEAEVAAVSSQVRLAVLKDAKLDVSALSKPPT |
Ga0318571_100506923 | 3300031549 | Soil | AAISREREQRRHWQQVRELIHQEADVDAVSWQLRLAILKDAKLVLSALS |
Ga0310915_105108874 | 3300031573 | Soil | RTILEACEYMAAIGKERELRPHWQQVRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPA |
Ga0318555_100593184 | 3300031640 | Soil | QVRELIDQEADVDTVSWKLGLAILKDAKLDVSKVPTK |
Ga0318574_101029466 | 3300031680 | Soil | AAIGNERELRPHWQQVRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0306917_113170151 | 3300031719 | Soil | KDGGTLRTILEACEYMAAIGKERELRPHWQQVRELMLQEADVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0306918_100508375 | 3300031744 | Soil | CEYMAAISHEREQRRHWRQVRELIDQEADVDTVSWKLGLAILKDAKLDVSKVPTK |
Ga0318502_110030192 | 3300031747 | Soil | AYEYMATIGKERELRPHWHQVRELMLQEAEVAAVSSQVRLAVLKDAKLDVSALSKPPT |
Ga0318492_106266251 | 3300031748 | Soil | AIGKERELRPHWQQVRELMLQEADVAAVSRRVRLAVLKDAKLNVSAVSEPLT |
Ga0318529_101841022 | 3300031792 | Soil | LRTIQQGCQYMDAISKEREQRRHWQQVCELIDQEADVDAVSWKLRIAVLKDAKLDVAAMA |
Ga0318568_107402991 | 3300031819 | Soil | YMAAIRKEREQRRHWQQVCELIDQEADVDAVSWKLRIAVLKDAKLDVAAMA |
Ga0318564_104716841 | 3300031831 | Soil | GCEYMAAISREREQRRHWQQVRELIHQEADVDAVSWQLRLAILKDAKLVLSALS |
Ga0318499_102379304 | 3300031832 | Soil | LRPHWLQIRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0306919_107948411 | 3300031879 | Soil | ELRRHWQQVRELLLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0318544_102703054 | 3300031880 | Soil | GKERELRPHWQQVRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0306925_118432862 | 3300031890 | Soil | IPTKDGGTLRTILEACEYVAAIGKERELRPHWQQVRELMLQEADVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0318522_101764324 | 3300031894 | Soil | LEACEYMAAIGKERELRPHWLQIRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0310909_111069301 | 3300031947 | Soil | KLRTILEACEYMAAIGKERELRPHWLQIRELMLQEADVAAVTWRVRLAVLKDAKLDVSALLSEPLT |
Ga0310909_111823381 | 3300031947 | Soil | ILEACEYIAAIGKERELRPHWQQVRELMLQEPDVAAVSWQVRFAVLKDAKLDLSKVPAK |
Ga0306922_102975416 | 3300032001 | Soil | AIGNERELRPHWQQVRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0318569_102536251 | 3300032010 | Soil | MAAISREREQRRHWQQVRELIHQEADVDAVSWQLRLAILKDAKLEQIPVEFT |
Ga0310911_102757082 | 3300032035 | Soil | MAAISKEREQRRHWQQVCELIDQEADVDAVSWKLRIAVLKDAKLDVAAMT |
Ga0310911_103702582 | 3300032035 | Soil | MAAISNEREQRRHWHQVRELIDEEADVDAVSWQLRLAILKERNVRI |
Ga0318532_101384182 | 3300032051 | Soil | MAAIRKEREQRRHWQQVCELIDQEADVDAVSWKLRIAVLKDAKLDVAAMT |
Ga0318506_104841093 | 3300032052 | Soil | ILEACEYMAAIGKERELRPHWQQVRELMLQEADVAAVLRLAILKDAKLDVSKVPAK |
Ga0318570_105465881 | 3300032054 | Soil | DGGTLRTILEACEYMAAIGKERELRPHWQQVRELMLQEADVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0318575_106617852 | 3300032055 | Soil | RPHWQQVRELMLQEADVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0318505_101024324 | 3300032060 | Soil | MAAIGKERELRAHWQQVRELMLQEADVVAVSWQVRLAVLKHAKLDALR |
Ga0318510_101737441 | 3300032064 | Soil | CEYMAAIGKERELRPHWQQVRELMLQEADVAAVLRLAILKDAKLDVSKVPAK |
Ga0318553_105122521 | 3300032068 | Soil | PIPTKDGGTLHTILEACEYMAAIGKERELRPHWLQIRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0306924_106044186 | 3300032076 | Soil | IPTKDGGTLRTILEACEYMAAIGKERELRPHWQQVRELMLQEPDVAAVSWKLRLAILKDAKLDVSKVPAK |
Ga0306924_111420661 | 3300032076 | Soil | AAIGKERELRPHWQQVRELMLQEADVAAVSWQVRLAVLKDAKLDVSKVPAK |
Ga0306924_117975832 | 3300032076 | Soil | MAAIGKERQLRPHWQQVRELMLQEAEVAAVSWRVWLAVLKDGKLDVSALSEPLT |
Ga0318518_105867571 | 3300032090 | Soil | EYMVAISHEREQRRHWRQVRELIDQEADVDTVSWKLGLAILKDAKLDVSKVPTK |
Ga0318577_105162291 | 3300032091 | Soil | RTILEGCEYMVAISHEREQRRHWRQVRELIDQEADVDTVSWKLGLAILKDAKLDVSKVPT |
Ga0310914_118605651 | 3300033289 | Soil | EYMAAIGKERELRPHWLQIRELMLQEADVAAVTWRVRLAVLKDAKLDVFALLSEPLT |
Ga0318519_110174631 | 3300033290 | Soil | GKERELRRHWQQVRELLLQEPDVAAVSWQVRLAVLKDAKLDVSKVPAK |
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