Metagenome Family F097037

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097037
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	68 residues
Representative Sequence	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL
Number of Associated Samples	81
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.24 %
% of genes near scaffold ends (potentially truncated)	1.92 %
% of genes from short scaffolds (< 2000 bps)	11.54 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.615 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (56.731 % of family members)
Environment Ontology (ENVO)	Unclassified (51.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.40% β-sheet: 0.00% Coil/Unstructured: 59.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	38.46
PF04397	LytTR	17.31
PF05977	MFS_3	8.65
PF06580	His_kinase	3.85
PF01797	Y1_Tnp	3.85
PF07690	MFS_1	1.92
PF13424	TPR_12	1.92
PF07883	Cupin_2	0.96
PF01618	MotA_ExbB	0.96
PF12802	MarR_2	0.96
PF01654	Cyt_bd_oxida_I	0.96
PF03807	F420_oxidored	0.96
PF03466	LysR_substrate	0.96
PF07336	ABATE	0.96
PF00753	Lactamase_B	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	8.65
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	3.85
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	3.85
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	3.85
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.96
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
All Organisms	root	All Organisms	15.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
cellular organisms	root	All Organisms → cellular organisms	15.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	5.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.62 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	5.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10001761	All Organisms → cellular organisms → Bacteria → Proteobacteria	8634	Open in IMG/M
3300007255\|Ga0099791_10045915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1948	Open in IMG/M
3300007265\|Ga0099794_10017167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3222	Open in IMG/M
3300009038\|Ga0099829_10344382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1226	Open in IMG/M
3300009143\|Ga0099792_10387719	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300012207\|Ga0137381_10059101	All Organisms → cellular organisms → Bacteria → Proteobacteria	3181	Open in IMG/M
3300012683\|Ga0137398_10286059	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300012917\|Ga0137395_10036035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3023	Open in IMG/M
3300012917\|Ga0137395_10217025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300012923\|Ga0137359_11707077	Not Available	517	Open in IMG/M
3300020170\|Ga0179594_10343132	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300021086\|Ga0179596_10176488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1030	Open in IMG/M
3300021086\|Ga0179596_10248389	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300027655\|Ga0209388_1056087	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300027671\|Ga0209588_1008513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3044	Open in IMG/M
3300027846\|Ga0209180_10206159	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300027875\|Ga0209283_10098545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1910	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.04%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	56.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100044501	3300002558	Grasslands Soil	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL*
JGI25382J43887_104275142	3300002908	Grasslands Soil	VNGAALVAVNAAMVDGAERQRLSQQEPQRIVITGRRQDLPEHRTLAVQNCPTRGTL*
JGI25616J43925_100017616	3300002917	Grasslands Soil	MALGVAIAVNAAALMAVNSAMVDAAERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL*
Ga0066674_103019141	3300005166	Soil	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0066672_100751652	3300005167	Soil	MALGIALAVNGAALVEVNAAMLEGAARQLLSQQEPECIVITGRKQDLPELRTLAVQNCPAHKTL*
Ga0066679_100197722	3300005176	Soil	MRRRIHLMALGIAITVNVAALMVVNAAMLDGAERERLSQHEPERIVITGSKQDLPEHRTLAVQNCPALKTL*
Ga0066690_102530432	3300005177	Soil	MKRGIRLVALGIAIAVNVAALVAVNAAMVDGAERQVLSQQEPERIVITGRRQDLPEHVAIRNCPVPKTL*
Ga0066685_103138022	3300005180	Soil	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0066676_102406313	3300005186	Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL*
Ga0066682_106381031	3300005450	Soil	MRRGTRLMALGVAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0066681_101901572	3300005451	Soil	MRRGTRLMALGIAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0066661_103450361	3300005554	Soil	MRRRIHLMALGIAITVNVAALMVVNAAMLDGAERERLSQHEPERIVITGSKQDLPEHRTLAVQNCPAKKTL*
Ga0066707_103548841	3300005556	Soil	MRRKIRLMALGIAVSVNGAALIAVNAAMVEGAERQLLSQQDPERIVIIGSRQDLPEHRTLAVQNCPTKKTL*
Ga0066699_108191542	3300005561	Soil	MRRGTRLMALGVAVTVNGAALVAVNAAMVESAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0066699_112609881	3300005561	Soil	MRRRIHLMALGIAITVNVAALMVVNAAMLDGAERERLSQQEPERIVITGSKQDLPEHRTLAVQNCPALKTL*
Ga0066653_106338991	3300006791	Soil	GIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0066665_109255111	3300006796	Soil	IRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0099791_100459152	3300007255	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMIDAAERELLSPQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL*
Ga0099791_104993761	3300007255	Vadose Zone Soil	MKREVRLMALGIAITVSGAALVAVNAAMVDGAERQLVSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0099793_100675712	3300007258	Vadose Zone Soil	MALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSREDLPEHRTLAVQNCPARKTL*
Ga0099793_105996301	3300007258	Vadose Zone Soil	MRRKIRLMALGIAVTVNGAALVAVNAAMVEGAERKLLSQEAPERIVITATRQDLPENQTVASRNCPAKKTL*
Ga0099794_100171672	3300007265	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMVDAAERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL*
Ga0099794_102290992	3300007265	Vadose Zone Soil	MRRKIRLMALGIAVTVNGAALVAVNAAMVDGAERQLVSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0099794_102864791	3300007265	Vadose Zone Soil	MNRGTSLVALGVAVGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQVSQTVASQNCAAPKPL*
Ga0066710_1034349682	3300009012	Grasslands Soil	MRRKIRLMALGIAVSVNGAALMAVNAAMVEGAERQLLSQQEPERIVIIGSRQDLPEHRTLAVQNCPTKKTL
Ga0099829_103443822	3300009038	Vadose Zone Soil	MKGESAMKRGNCLMALGVAIAVNAAALMAVNSAMVDAVERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL*
Ga0099830_114387812	3300009088	Vadose Zone Soil	MKRRIRLIALGIAIAVNGAALVAVNAAMVEGAERQLLSQQEPERIVITAPRQEDPAPQTL
Ga0099828_102347101	3300009089	Vadose Zone Soil	RGNCLMALGVAIAVNAAALMAVNSAMVEGAERELLSQPQPQRVVVTAKRQDLPANQTIASQNCPAPKAL*
Ga0099827_104361662	3300009090	Vadose Zone Soil	MALGIAIAVNGAALVAVNAAMLDGAERQLLSQQEPERIVITAPRQEDPAPQALAIQNCPTKKTL*
Ga0099827_106483562	3300009090	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMVDGAGRERVSQQQIERIVITAKRQDLPENQAAASQDCPGPKAL*
Ga0099827_113287542	3300009090	Vadose Zone Soil	MSLVALGVAIGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQASQTVASQNCAAPKPL*
Ga0066709_1032096092	3300009137	Grasslands Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0066709_1040909911	3300009137	Grasslands Soil	MALGIAVSVNGAALMAVNAAMVEGAERQLLSQQEPERIVIIGSRQDLPEHRTLAVQNCPTKKTL*
Ga0099792_103877192	3300009143	Vadose Zone Soil	IRLVALGVAIAVNGTGLLAVNAAMVDGGRELVSQQQIERIVITAKRQDLAANQTVASQNCPTPKAL*
Ga0134082_100647612	3300010303	Grasslands Soil	MALGIAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0134063_103567321	3300010335	Grasslands Soil	MALGIAVTVNGVALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0137392_101651862	3300011269	Vadose Zone Soil	MKRGIRLMALGIAIAVNGTALVAVNAAMLDGAERQLLSQQEPERIVITAPRQEDPAPQALAIQNCPTKKTL*
Ga0137391_101412863	3300011270	Vadose Zone Soil	MKRGIRLMALGIAIAVNGTALVAVNAAMLDGAERQLLSQQEPERVVITGTRQDLPENQTLAIQNCPAKKTL*
Ga0137393_105971372	3300011271	Vadose Zone Soil	MKRGIRLMALGIAIAVNGTALVAVNAAMLDGAERQLLSQQEPERIVITAPRQEDPAPQALAIQNCPAKKTL*
Ga0137463_10214122	3300011444	Soil	MKQRKNCLMALGFAIAVNAAALMAVNSAMVDAAERELLSQQQPVQVVVITAKRQDLEASQTVASQNCAASKTL*
Ga0137388_101234112	3300012189	Vadose Zone Soil	MKRGIRLMALGIAIAVNGTALVAVNAAMLDGAERQLLSQQEPERIVITAPRQEDRAPQALAIQNCPAKKTL*
Ga0137364_102409322	3300012198	Vadose Zone Soil	MKRGIRLVALGIAIAVNVAALMVVNAAMVDGAERERLSQQEPERIVILGSRQDLPEHRTLAVENCPTEKTL*
Ga0137364_105057722	3300012198	Vadose Zone Soil	MALGIAIAVNVAALVAVNAAMVDGAERERLSQQEPERIVITGRRQDLPEHRTLAVQNCPALKTL*
Ga0137363_105338561	3300012202	Vadose Zone Soil	MALGIAVTVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPTRRTL*
Ga0137399_108331262	3300012203	Vadose Zone Soil	MALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGGRQDLPEHRTLAVQNCPAQKTL*
Ga0137399_116708812	3300012203	Vadose Zone Soil	MRRKIRLMALGIAVTVNGAALVAVNAAMVEGAERKLLSQEAPERIVITATRQDLPENQTVASQNCPAKKTL*
Ga0137381_100591014	3300012207	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMVDGAGRELVSQQQIERIVITAKRQDLPANRTVASQNCPTPKAL*
Ga0137381_107525352	3300012207	Vadose Zone Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAKKTL*
Ga0137370_101292513	3300012285	Vadose Zone Soil	MALGIALTVNVAALMVVNAAMRDGAERERLSQQEPERIVITGSKQDLPEHRTLAIQNCPALKTL*
Ga0137360_100881584	3300012361	Vadose Zone Soil	AALVAVNAAMVDGAERQRLSQQEPQRIVITGRRQDLPEHRTLAVQNCPTRRTL*
Ga0137360_106947731	3300012361	Vadose Zone Soil	MALGIAVTVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAQKTL*
Ga0137361_105497592	3300012362	Vadose Zone Soil	MALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAKKTL*
Ga0137358_100498332	3300012582	Vadose Zone Soil	MALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAQKTL*
Ga0137398_102860592	3300012683	Vadose Zone Soil	MKRRIRLVALGVAIAVNGTGLLAVNAAMVDGAGRELASQQQIERIVITAKRQDLPANQTVASQNCPTPKTL*
Ga0137397_101187592	3300012685	Vadose Zone Soil	MKREIRLMALGIAITVNGAALVAVNAAMVDGAERQLVSQQEPERIVITATRQDLPENQTVASQNCPARKTL*
Ga0137397_111561161	3300012685	Vadose Zone Soil	IAIAVNGGALMAVNAAMVDGAERQLLSQQEPERIVITATRQDLPENQTLAIQNCPAKKTL
Ga0137395_100360352	3300012917	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMVDAAERELLSQQQPLHVVVITTKRQDLPANQTIASQNCPAPKAL*
Ga0137395_102170252	3300012917	Vadose Zone Soil	MKRGIRLAALGVAIAVNGTGLLAVNAAMVDGAGRELVSQQQIERIVITAKRQDLPPGQTVAIQNCPTPKAL*
Ga0137394_104806592	3300012922	Vadose Zone Soil	MALGIAIAVNGAVLVAVNAAMVDGAERQLLSQQEPERIVITAPRQEDPAPQALAIQNCPAKKTL*
Ga0137394_108311032	3300012922	Vadose Zone Soil	MKREIRLMALGIAIAVNGGALMAVNAAMVDGAGRQLLSQQEPERIVIIGSRQDLPEHRTLAVQNCPAKKTL*
Ga0137394_110729322	3300012922	Vadose Zone Soil	MSLVALGVAIGVNAAALIAVNSAMVDAAERELLSQQQPVHVVVITAKRQDLQASQIVASQNCAAPKPL*
Ga0137359_117070771	3300012923	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMVDGAGRELVPQEQIERIVITAKRQDLPANQTVASQNCPTPKTL*
Ga0137419_104881252	3300012925	Vadose Zone Soil	MALGIAIAVNGAALVAVNGAMVDGAERQRLSQQEPERIVITGSRQDLPEHRTLAVQNCPAQKTL*
Ga0137419_118441702	3300012925	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMLDGAGRELVSQQQIERIVITAKKQDLPPGQTVAIQNCPTPKAL*
Ga0137416_111400061	3300012927	Vadose Zone Soil	AIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSREDLPEHRTLAVQNCPARKTL*
Ga0137416_120038921	3300012927	Vadose Zone Soil	LGIAMAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITATRQDLPENQTVAIQNCPAPRAL*
Ga0137404_116158032	3300012929	Vadose Zone Soil	MALGIAVAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAQKTL*
Ga0134087_101414911	3300012977	Grasslands Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL*
Ga0134075_100198952	3300014154	Grasslands Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRPDLPENQTVASQNCPARKTL*
Ga0137411_11082572	3300015052	Vadose Zone Soil	MSLVALGVAVGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQVSQTVASQNCAAPKPL*
Ga0137409_101207442	3300015245	Vadose Zone Soil	MNRGMSLVALGVAVGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQVSQTVASQNCAAPKPL*
Ga0134089_101257132	3300015358	Grasslands Soil	MALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRPDLPENQTVASQNCPAKKTL*
Ga0066655_100675983	3300018431	Grasslands Soil	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL
Ga0066669_100094203	3300018482	Grasslands Soil	MRRGTRLMALGIAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL
Ga0193754_10042891	3300019872	Soil	MKLSGIRLAALGIAIAVNGTALMAVNAAMVDGAERGLLSQQEPERIVITAKRLDLPGNQTVATGNCPGPKAL
Ga0193712_10196351	3300019880	Soil	VAIAVNAAALIAVNSAMVDAAERELLSQQQPVHVVVITAKRQDLEANQTVASQNCAASKT
Ga0193712_10392711	3300019880	Soil	MKLSGIRLAALGIAIAVNCTALMAVNAAMVDGAERGLLSQQEPERIVITAKRLDLPGNQTVATGNCPGPKAL
Ga0193713_10582981	3300019882	Soil	MKRANCLMALGVAIAVNAAALIAVNSAMVDAAERELLSQQQPVHVVVITAKRQDLEANQTVASQNCAASKTL
Ga0193725_10004296	3300019883	Soil	MKQRKNCLMALGFAIAVNAAALMAVNSAMVDAAERELLSQQQPVQVVVITAKRQDLEASQTVASQNCAASKTL
Ga0179594_103431321	3300020170	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMVDGAGRELVSQQQIERIVITAKRQDLPPGQTVAIQNCPTPKAL
Ga0179596_101764881	3300021086	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMVDAVERELLSQQQPLHVVVITAKRQDLPANQ
Ga0179596_102483892	3300021086	Vadose Zone Soil	MKRRIRLVALGVAIAVNGTGLLAVNAAMVDGAGRELVSQQQIERIVITAKRQDLPPGQTVAIQNCPTPKAL
Ga0137417_10344552	3300024330	Vadose Zone Soil	MKRRIRLMALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSREDLPEHRTLAVQ
Ga0209350_10468542	3300026277	Grasslands Soil	MRRGIRLMALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL
Ga0209234_10871542	3300026295	Grasslands Soil	MRRGIRLMALGIAVTVNGVALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL
Ga0209240_10398653	3300026304	Grasslands Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMLDGAGRELVSQQQIERIVITAKRQDLPPGQTVAIQNCPTPKAL
Ga0209469_10025963	3300026307	Soil	LPWVRRLLNLNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAKKTL
Ga0209268_10247411	3300026314	Soil	MKRRIRLIALGIAIAVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQ
Ga0209154_10049332	3300026317	Soil	MALGIALAVNGAALVEVNAAMLEGAARQLLSQQEPECIVITGRKQDLPELRTLAVQNCPAHKTL
Ga0209471_10401872	3300026318	Soil	MRRRIHLMALGIAITVNVAALMVVNAAMLDGAERERLSQHEPERIVITGSKQDLPEHRTLAVQNCPALKTL
Ga0209152_100870322	3300026325	Soil	MRRGTRLMALGIAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL
Ga0209801_10333104	3300026326	Soil	AVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPAKKTL
Ga0209266_10115941	3300026327	Soil	ALGIAVTVNGAALMAVNAAMVEGAERQLLSQQEPERIVITATRQDLPENQTVASQNCPARKTL
Ga0209375_11342572	3300026329	Soil	MRRGTRLMALGVAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL
Ga0209056_105098001	3300026538	Soil	AMRRGTRLMALGIAVTVNGAALVAVNAAMVEGAERQLLSQQEPERIVITATRQDLLENQTVASRNCPAKKTL
Ga0179587_102199582	3300026557	Vadose Zone Soil	MRRGIRLMALGIAVTVNGAALVAVNAAMVDGAERQLLSQQEPERIVITGSRQDLPEHRTLAVQNCPAQKTL
Ga0209388_10560871	3300027655	Vadose Zone Soil	MKRGNCLMALSVAIAVNAAALMAVNSAMVDAAERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL
Ga0209588_10085131	3300027671	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMVDAAERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL
Ga0209588_11109132	3300027671	Vadose Zone Soil	MNRGTSLVALGVAVGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQVSQTVASQNCAAPKPL
Ga0209588_11883542	3300027671	Vadose Zone Soil	MKREIRLMALGIAITVNGAALVAVNAAMVDGAERQLVSQQEPERIVITATRQDLPENQTVASQNCPARKTL
Ga0209180_102061592	3300027846	Vadose Zone Soil	MALGVAIAVNAAALMAVNSAMVDAVERELLSQQQPLHVVVITAKRQDLPANQTIASQNCPAPKAL
Ga0209283_100985452	3300027875	Vadose Zone Soil	MKRGNCLMALGVAIAVNAAALMAVNSAMVEGAERELLSQPQPQRVVVTAKRQDLPANQTIASQNCPAPKAL
Ga0209590_103283633	3300027882	Vadose Zone Soil	MKRGIRLVALGVAIAVNGTGLLAVNAAMVDGAGRERVSQQQIERIVITAKRQDLPENQAAASQDCPGPKAL
Ga0209590_108143911	3300027882	Vadose Zone Soil	MNRGMSLVALGVAIGVNAAGLMAVNSAMVDAAERELLSQQQPVNVVVITAKRQDLQASQTVASQNCAAPKPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097037

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences