Metagenome / Metatranscriptome Family F097000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	72 residues
Representative Sequence	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.62 %
% of genes near scaffold ends (potentially truncated)	24.04 %
% of genes from short scaffolds (< 2000 bps)	52.88 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.923 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (22.115 % of family members)
Environment Ontology (ENVO)	Unclassified (52.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.192 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.82% β-sheet: 0.00% Coil/Unstructured: 59.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF12851	Tet_JBP	7.69
PF13730	HTH_36	5.77
PF12002	MgsA_C	5.77
PF00589	Phage_integrase	3.85
PF13532	2OG-FeII_Oxy_2	2.88
PF09250	Prim-Pol	2.88
PF07505	DUF5131	1.92
PF07676	PD40	1.92
PF08388	GIIM	1.92
PF04191	PEMT	1.92
PF07120	DUF1376	1.92
PF00226	DnaJ	0.96
PF00782	DSPc	0.96
PF13442	Cytochrome_CBB3	0.96
PF12844	HTH_19	0.96
PF02518	HATPase_c	0.96
PF07638	Sigma70_ECF	0.96
PF12969	DUF3857	0.96
PF14216	DUF4326	0.96
PF00239	Resolvase	0.96
PF00248	Aldo_ket_red	0.96
PF13482	RNase_H_2	0.96
PF06202	GDE_C	0.96
PF00795	CN_hydrolase	0.96
PF02635	DrsE	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	1.92
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	1.92
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.96
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
All Organisms	root	All Organisms	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
cellular organisms	root	All Organisms → cellular organisms	41.35 %
Viruses	superkingdom	All Organisms → Viruses	6.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	1.92 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	1.92 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	1.92 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.92 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.96 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.96 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.96 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10012028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5688	Open in IMG/M
3300000567\|JGI12270J11330_10169586	Not Available	788	Open in IMG/M
3300001356\|JGI12269J14319_10050724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2475	Open in IMG/M
3300004091\|Ga0062387_100724483	Not Available	731	Open in IMG/M
3300004092\|Ga0062389_101060638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	996	Open in IMG/M
3300004152\|Ga0062386_100032413	Not Available	3884	Open in IMG/M
3300004635\|Ga0062388_100800190	Not Available	893	Open in IMG/M
3300005332\|Ga0066388_102793120	Not Available	892	Open in IMG/M
3300006052\|Ga0075029_100003864	All Organisms → cellular organisms → Bacteria → Acidobacteria	8366	Open in IMG/M
3300006052\|Ga0075029_101151691	Not Available	540	Open in IMG/M
3300006055\|Ga0097691_1105663	Not Available	815	Open in IMG/M
3300006059\|Ga0075017_100000494	All Organisms → cellular organisms → Bacteria → Acidobacteria	22192	Open in IMG/M
3300006162\|Ga0075030_100121065	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2127	Open in IMG/M
3300006162\|Ga0075030_100127203	Not Available	2069	Open in IMG/M
3300006795\|Ga0075520_1024361	Not Available	3015	Open in IMG/M
3300009518\|Ga0116128_1011777	Not Available	3111	Open in IMG/M
3300009518\|Ga0116128_1031368	Not Available	1759	Open in IMG/M
3300009518\|Ga0116128_1094247	Not Available	890	Open in IMG/M
3300009519\|Ga0116108_1016447	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300009522\|Ga0116218_1116982	Not Available	1213	Open in IMG/M
3300009523\|Ga0116221_1015744	All Organisms → cellular organisms → Bacteria	4151	Open in IMG/M
3300009523\|Ga0116221_1286345	Not Available	713	Open in IMG/M
3300009524\|Ga0116225_1214626	Not Available	868	Open in IMG/M
3300009548\|Ga0116107_1085408	Not Available	969	Open in IMG/M
3300009549\|Ga0116137_1007681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4792	Open in IMG/M
3300009552\|Ga0116138_1013224	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300009615\|Ga0116103_1017584	Not Available	2322	Open in IMG/M
3300009616\|Ga0116111_1009314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4167	Open in IMG/M
3300009629\|Ga0116119_1073276	Not Available	869	Open in IMG/M
3300009631\|Ga0116115_1076813	Not Available	866	Open in IMG/M
3300009639\|Ga0116122_1011820	Not Available	3289	Open in IMG/M
3300009639\|Ga0116122_1019061	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300009640\|Ga0116126_1250112	Not Available	556	Open in IMG/M
3300009700\|Ga0116217_10106788	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300009700\|Ga0116217_10611633	Not Available	678	Open in IMG/M
3300009839\|Ga0116223_10365328	All Organisms → Viruses	853	Open in IMG/M
3300010339\|Ga0074046_10038555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3224	Open in IMG/M
3300010339\|Ga0074046_10157555	Not Available	1445	Open in IMG/M
3300010341\|Ga0074045_10079585	Not Available	2296	Open in IMG/M
3300010341\|Ga0074045_10101263	All Organisms → Viruses → Predicted Viral	1993	Open in IMG/M
3300010341\|Ga0074045_10389153	Not Available	905	Open in IMG/M
3300010343\|Ga0074044_11040977	Not Available	537	Open in IMG/M
3300010379\|Ga0136449_100043582	All Organisms → cellular organisms → Bacteria → Acidobacteria	10324	Open in IMG/M
3300010379\|Ga0136449_100059805	All Organisms → cellular organisms → Bacteria → Acidobacteria	8371	Open in IMG/M
3300010379\|Ga0136449_100081371	All Organisms → cellular organisms → Bacteria	6827	Open in IMG/M
3300012354\|Ga0137366_10337315	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1105	Open in IMG/M
3300012929\|Ga0137404_10188220	Not Available	1742	Open in IMG/M
3300014501\|Ga0182024_10055631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6193	Open in IMG/M
3300016371\|Ga0182034_10430484	Not Available	1088	Open in IMG/M
3300017925\|Ga0187856_1019448	All Organisms → cellular organisms → Bacteria	3512	Open in IMG/M
3300017925\|Ga0187856_1205505	Not Available	712	Open in IMG/M
3300017929\|Ga0187849_1023782	All Organisms → cellular organisms → Bacteria	3346	Open in IMG/M
3300017929\|Ga0187849_1046698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2057	Open in IMG/M
3300017931\|Ga0187877_1074792	Not Available	1466	Open in IMG/M
3300017943\|Ga0187819_10419928	Not Available	768	Open in IMG/M
3300017955\|Ga0187817_10036833	Not Available	2983	Open in IMG/M
3300017955\|Ga0187817_10164563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1411	Open in IMG/M
3300017955\|Ga0187817_10421138	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300017955\|Ga0187817_10539988	Not Available	744	Open in IMG/M
3300017955\|Ga0187817_10835669	Not Available	588	Open in IMG/M
3300017972\|Ga0187781_10513729	Not Available	860	Open in IMG/M
3300017972\|Ga0187781_11024951	Not Available	604	Open in IMG/M
3300017996\|Ga0187891_1030655	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300018004\|Ga0187865_1008188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6229	Open in IMG/M
3300018007\|Ga0187805_10120625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1189	Open in IMG/M
3300018017\|Ga0187872_10080439	Not Available	1668	Open in IMG/M
3300018017\|Ga0187872_10309384	Not Available	689	Open in IMG/M
3300018025\|Ga0187885_10100427	Not Available	1407	Open in IMG/M
3300018034\|Ga0187863_10010122	All Organisms → cellular organisms → Bacteria	6157	Open in IMG/M
3300018057\|Ga0187858_10309284	Not Available	1000	Open in IMG/M
3300018088\|Ga0187771_10913704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300020583\|Ga0210401_10174268	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300021433\|Ga0210391_11481785	Not Available	520	Open in IMG/M
3300021477\|Ga0210398_10030807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4492	Open in IMG/M
3300021560\|Ga0126371_10205559	Not Available	2066	Open in IMG/M
3300025442\|Ga0208034_1037511	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300025454\|Ga0208039_1005417	All Organisms → cellular organisms → Bacteria	3765	Open in IMG/M
3300025460\|Ga0208562_1054402	Not Available	860	Open in IMG/M
3300025650\|Ga0209385_1019719	Not Available	2730	Open in IMG/M
3300027570\|Ga0208043_1042827	Not Available	1351	Open in IMG/M
3300027604\|Ga0208324_1044072	Not Available	1313	Open in IMG/M
3300027641\|Ga0208827_1152394	Not Available	642	Open in IMG/M
3300027825\|Ga0209039_10008803	All Organisms → cellular organisms → Bacteria	6169	Open in IMG/M
3300027854\|Ga0209517_10002138	All Organisms → cellular organisms → Bacteria	28429	Open in IMG/M
3300027854\|Ga0209517_10011967	All Organisms → cellular organisms → Bacteria	9329	Open in IMG/M
3300027898\|Ga0209067_10005115	All Organisms → cellular organisms → Bacteria → Acidobacteria	7314	Open in IMG/M
3300027905\|Ga0209415_10027979	All Organisms → cellular organisms → Bacteria	8281	Open in IMG/M
3300027905\|Ga0209415_10158411	All Organisms → cellular organisms → Bacteria → Acidobacteria	2252	Open in IMG/M
3300027911\|Ga0209698_10030904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4900	Open in IMG/M
3300027911\|Ga0209698_10052376	All Organisms → cellular organisms → Bacteria → Acidobacteria	3570	Open in IMG/M
3300027911\|Ga0209698_10058397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3344	Open in IMG/M
3300027911\|Ga0209698_10188262	All Organisms → Viruses → Predicted Viral	1674	Open in IMG/M
3300030578\|Ga0210275_10198980	Not Available	642	Open in IMG/M
3300030659\|Ga0316363_10360947	Not Available	570	Open in IMG/M
3300032160\|Ga0311301_10006153	All Organisms → cellular organisms → Bacteria	41299	Open in IMG/M
3300032160\|Ga0311301_10076440	Not Available	6956	Open in IMG/M
3300032770\|Ga0335085_10009838	All Organisms → cellular organisms → Bacteria	14364	Open in IMG/M
3300032805\|Ga0335078_10528831	Not Available	1507	Open in IMG/M
3300032829\|Ga0335070_10024098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6996	Open in IMG/M
3300033134\|Ga0335073_11263799	Not Available	734	Open in IMG/M
3300033158\|Ga0335077_10450882	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300033158\|Ga0335077_10612636	Not Available	1134	Open in IMG/M
3300033405\|Ga0326727_10807152	Not Available	722	Open in IMG/M
3300033888\|Ga0334792_002130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.96%
Aquatic	Environmental → Aquatic	49.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.04%
Freshwater	Environmental → Aquatic → Freshwater	39.42%
Sediment	Environmental → Aquatic → Sediment	9.62%
Peat	Environmental → Terrestrial → Peat	1.92%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	39.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	16.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	5.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100120282	3300000567	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV*
JGI12270J11330_101695862	3300000567	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV*
JGI12269J14319_100507242	3300001356	Peatlands Soil	MQISLKNTLKTARLSFDARLAEVLIGRPDLSYTEIEKDFGISETVIRRVMKQFSIGVRKRGPKPGKRVSRG*
Ga0062387_1007244832	3300004091	Bog Forest Soil	MQISLKNTLKTARLSFDARLAEVLITRQDLSYAEIEKDFGISETVIRRVMKQYRIGARKRGPKPGKQETKQSRELKAVSRA*
Ga0062389_1010606383	3300004092	Bog Forest Soil	MQIERTTLKENITRVRLSFDARLAEQLVARPELSHAHIQKEFGISQKVIRRVVKQFKIAARKRGPKPSEQMRGV*
Ga0062386_1000324136	3300004152	Bog Forest Soil	MQISLKNTLKTARLSFDARLAEVLIARPDLSYTHIGREFGISETVIRRVMKQFSLAARKRGPKPGQQKAWGPTK*
Ga0062388_1008001902	3300004635	Bog Forest Soil	MQISLKDTLKTARLDFDNRLAKVLIVRPDLSYVEIEKDFGISETVIRRVMRQFSIGARKRGPKVKELPRG*
Ga0066388_1027931202	3300005332	Tropical Forest Soil	MQISLRNTLKTARLGFDTRLAEVLIGRPDLSYAQIEKEFGISETVIRRVMKQFNIGARKRGPKPGWLKKSREAVNG*
Ga0075029_1000038649	3300006052	Watersheds	MQISLKNTLKTARLGFDARLAEVLIGRPDLPYSQIEKDFGISETVIRRVMKQFSIGARKRGPKPGKREAGEPTK*
Ga0075029_1011516911	3300006052	Watersheds	MPIKQIKQVNLRDELMRVRLSSDTRLAEVLVGRPDLTYVQIEKEFGISEKVIRRVTKQFNIGARKRGPKSGQEPRV*
Ga0097691_11056632	3300006055	Arctic Peat Soil	MQISLKDTLKTARLQFDTRLAEVLIGRPDLPYNEIEREFGISETVIRRVMKQFSIGARKSGPKPGRLKKAQKQAI*
Ga0075017_10000049415	3300006059	Watersheds	MQISLKNTLKTARLGFDARLAEVLIARPDLSYAQIEKDFGISETVIRRVMRQFNIGARKRGPKPGKPQRQVSRG*
Ga0075030_1001210652	3300006162	Watersheds	MQISLKDTFKTARLQFDTRLAEVLITRPDLSYAEIQKDFGISETVIRRVMKLYSIGARKRGPKPGKQETQQNREPKEVSRG*
Ga0075030_1001272031	3300006162	Watersheds	MQISLKNTLKTARLSFDARLAEMLIARPDLSYTNIGKEFGVSETVIRRVMKQFSIGARKRGPKPGKSQRKVLRG*
Ga0075520_10243613	3300006795	Arctic Peat Soil	MQISLKDTLKTARLSFDARLAEVLIGRPDLPYNEIEKDFGISETVIRRVAKQFNIGARKRGPKPGGLTKAQKQAV*
Ga0116128_10117774	3300009518	Peatland	MGMQVSLKDTLKMARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVFRGN*
Ga0116128_10313682	3300009518	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYVEIEKEFGISETVICRVRKQFSIRERKRGPKPGRSRKAQKQAA*
Ga0116128_10942471	3300009518	Peatland	TLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPGKQVSRGN*
Ga0116108_10164473	3300009519	Peatland	MGMQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPGKQVSRGN*
Ga0116218_11169822	3300009522	Peatlands Soil	MGMQISLRDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV*
Ga0116221_10157446	3300009523	Peatlands Soil	MQISLRDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV*
Ga0116221_12863452	3300009523	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKP
Ga0116225_12146262	3300009524	Peatlands Soil	MGMQISLRDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMRQFNIGARKRGPKPRKQAVV*
Ga0116107_10854082	3300009548	Peatland	EFDTRLAEVLIGRLDLPYVEIEKEFGISETVICRVRKQFSIRERKRGPKPGRSRKAQKQAA*
Ga0116137_10076816	3300009549	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYHEIEKEFGISETVICRVRKQFSIAERKRGPKPGRLKKAQRQTV*
Ga0116138_10132242	3300009552	Peatland	MGMQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVFRGN*
Ga0116103_10175843	3300009615	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYVEIEKEFGISETVICRVRKQFSIAERKRGPKPGRSRKAQKQAA*
Ga0116111_10093144	3300009616	Peatland	MGMQISLKNTLKTARLSFDARLAEVLIARPDLSYTEIEKDFGISETVIRRVMKQFNIGARKRGPKSRKTVPAGA*
Ga0116119_10732761	3300009629	Peatland	DTLRMARLEFDTRLAEVLIGRLDLPYHEIEKEFGISETVICRVRKQFSIAERKRGPKPGRLKKAQRQTV*
Ga0116115_10768132	3300009631	Peatland	MGMQVSLKDTLKMARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVF
Ga0116122_10118209	3300009639	Peatland	VSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPGKQVSRGN*
Ga0116122_10190611	3300009639	Peatland	VSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVFRGN*
Ga0116126_12501121	3300009640	Peatland	MGMQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGLKPGKQVSRGN*
Ga0116217_101067881	3300009700	Peatlands Soil	TLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV*
Ga0116217_106116331	3300009700	Peatlands Soil	TLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV*
Ga0116223_103653282	3300009839	Peatlands Soil	MQISLKDTLKTARLTFDARLAEVLIGRPDLSYTKIEEEFGISETVIRRVMKQFNIGARKRGPKPKRQLATE
Ga0074046_100385553	3300010339	Bog Forest Soil	MQMSLKDTLRMARLEFDTRLAEVLIGRLDLPYHEIEKEFGISETVICRVKKQFSIGERKRGPKPGRLKKVQKQAV*
Ga0074046_101575553	3300010339	Bog Forest Soil	MEMQISLKDTLNTARLSFDARLAEVLIARPDLSYTEIEKDFGISETVIRRVMKQFNIDARKRGPKPGGTEAQKQAV*
Ga0074045_100795851	3300010341	Bog Forest Soil	MEMTLKDKLKTARLNFDTRLAEVLNARPDLTHRAIETEFDVSETVIRRVIKQFAIPPRKRGPKPRGWTKAQKQAVGNGR*
Ga0074045_101012631	3300010341	Bog Forest Soil	MEMQISLKDTLKTARLQFDARLAEVLIARPDLTYTQIEKDFGISETVIRRVMKQFNIGSRKRGPKPRQQNAEELAK*
Ga0074045_103891532	3300010341	Bog Forest Soil	MKMQISLKDTLKTARLQFDTRLAEVLIGRPDLPYDQIEREFGISETVIRRVMNQFNIGARKRGPKPRWLKKTQKEVV*
Ga0074044_110409771	3300010343	Bog Forest Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEMEFGISETVIRRVMKQFNIGARKRGPKPKRQLATEKL*
Ga0136449_1000435825	3300010379	Peatlands Soil	MQISLKDTLKTARLGFDSRLAEVLIARPDLTYTQIEKDFGISETVIRRVMKQYSIGARKRGPKPGKHDTQQSREPKAVSRG*
Ga0136449_1000598057	3300010379	Peatlands Soil	MQISLRDTLKTARLDFDNQLAKVLIGRPDLSYTEIEKDFGISETVIRRVMKQFNIGARKRGPKPRQQKAEELAK*
Ga0136449_1000813718	3300010379	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQPATEKP*
Ga0137366_103373152	3300012354	Vadose Zone Soil	MQISLKDTLKTARLGFDTRLAEVLIGRPDRTYTDIEQEFGISETVIRRVSKQFTIGPRK
Ga0137404_101882202	3300012929	Vadose Zone Soil	MGMQISLKDTLKAARLDFDNQVAKALIARPDLSYAEIEKDFGISETVIRRVMKQFHIGARKRGPKSGKPPKQVSRG*
Ga0182024_100556316	3300014501	Permafrost	MQIEQINLRDKLDRARLSFDTQLAEVLVGRPDVGYAQIEEEFGISEKVIRRVMKQFNIGARKRGPKPKQQGPNV*
Ga0182034_104304842	3300016371	Soil	MQISLKNTLKTARLGFDTRLAEVLIGRPDLSYAQIEEEFGISETVIRRVMKQFNIGARKRGPKVKKSQEVVNVKS
Ga0187856_10194482	3300017925	Peatland	MQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVFRGN
Ga0187856_12055052	3300017925	Peatland	MQISLKNTLKTARLSFDARLAEVLIGRPDLPYSQIEKDFGISETVIRRVLKQCNIGARKRVPKVQEVSRV
Ga0187849_10237825	3300017929	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYVEIEKEFGISETVICRVRKQFSIRERKRGPKPGRSRKAQKQAA
Ga0187849_10466981	3300017929	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYHEIEKEFGISETVICRVRKQFSIAERKR
Ga0187877_10747922	3300017931	Peatland	MQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPGKQVSRGN
Ga0187819_104199281	3300017943	Freshwater Sediment	MQISLKNTLKTARLSFDARLAEVLIARPDLSYNQIEREFGISETVIRRVMKQFSIGVRKRGPKPGKRVSRG
Ga0187817_100368331	3300017955	Freshwater Sediment	QISLKNTLKTARLGFDTRLAEILIGRPDLSYTQIEKDFGISETVIRRVMKQFSIGVRKRGPKPGKRVSRG
Ga0187817_101645631	3300017955	Freshwater Sediment	MQISLKDTLKTARLQFDSRLAEVLIARPDLSYTQIEKDFGISETVIRRVMKQFNIGARKRGPKPVKSTRLHDNGNV
Ga0187817_104211381	3300017955	Freshwater Sediment	MQISLKNTLKTARLSFDARLAEVLIARPDLSYADIGKDFGISETVIRRVMRQFNIGARKRGPKVKE
Ga0187817_105399883	3300017955	Freshwater Sediment	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQPATEKL
Ga0187817_108356692	3300017955	Freshwater Sediment	MQIEQVNLREKLEQARLSFDSQLAEVLVGRPDLSQAQIKKEFGISDKVIRRVMKQFNIGARKRGPKHTQQVASAEC
Ga0187781_105137292	3300017972	Tropical Peatland	MQISLKDTLKTARLGFDARLAEVLIARPDLSYTEIEKDFGISETVIRRVMKQFNIGARKRGPKPTKSTRAQGNGNV
Ga0187781_110249511	3300017972	Tropical Peatland	MQVSLRDTLKSARLDFDSRLAKVLVGRPDLSYTEIEKEFGISETVIRRVMKQFGMGARKRGPKPRKQVSHG
Ga0187891_10306554	3300017996	Peatland	MQVSLKDTLKMARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARQRGPKPKQVFRGN
Ga0187865_10081886	3300018004	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYHEIEKEFGISETVICRVRKQFSIAERKRGPKPGRLKKAQRQTV
Ga0187805_101206252	3300018007	Freshwater Sediment	MPIKQINQVHLRDELARVRLDFDTQLAEVLLRQPDLTHIQIRTEFGISEKVIRRVAKQFKIAARKPGPKPKQQVPSS
Ga0187872_100804392	3300018017	Peatland	MQISLRDTIKTARLSFDARLAEVLIARPDLRYTEIEKDFGISETVIRRVTKQFNIGARKRGPKSKKSRGV
Ga0187872_103093842	3300018017	Peatland	SLKDTLKTARLNFDNRLAKVLITRPDLTYTQIEKDFGISETVIRRVMKQFNIGARKRGPKVKAVSRG
Ga0187885_101004272	3300018025	Peatland	MQISLKDTLRMARLEFDTRLAEVLIGRLDLPYVEIEKEFGISETVICRVRKQFSIAERKRGPKPGRSRKAQKQAA
Ga0187863_1001012212	3300018034	Peatland	VPIKQIKQVNLRDELMRVRLNFDAHLAEVLVSRPDLTYIQIEKEFGVSEKVIRRVMKQFNIGARKRGSKPRQQVPRV
Ga0187858_103092842	3300018057	Peatland	MQISLKNTLRTARLSFDARLAEVLIGRPDLTYTQIEKDFGISETVIRRVMKQFDIGARKRGPKVKEVSRGN
Ga0187771_109137042	3300018088	Tropical Peatland	MQISLKDTLKTARLNFDTRLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFLIGPRKRGPKPKKQTVQQGPAFRQEKNQ
Ga0210401_101742682	3300020583	Soil	MQISLRNTLKTARLQFDTRLAEVLIARPDLKYTQIEKDFGISETVIRRVMKQFNIGARKRGPKPGWSKKSKEAANG
Ga0210391_114817852	3300021433	Soil	MQISLKNTLKTARLDFDNRLARVLIARPDLSYAQIEKDFGISETVIRRVMKLFNIGARKRGPKPRSGKEQAASH
Ga0210398_1003080711	3300021477	Soil	MQISLKNTLKMARLSFDARLAEVLIARPDLSYTKIEKDFGISETVIRRVTKQFNIGARKRGPKSKKPAGVQP
Ga0126371_102055594	3300021560	Tropical Forest Soil	MQISLRNTLKTARLGFDTRLAEVLIGRPDLSYTQIENEFGISETVIRRVMKQFNIGARKRGPKVKKNKEAVNG
Ga0208034_10375111	3300025442	Peatland	QISLKNTLKTARLSFDARLAEVLIARPDLSYTEIEKDFGISETVIRRVMKQFNIGARKRGPKSRKTVPAGA
Ga0208039_10054171	3300025454	Peatland	MQVSLKDTLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKR
Ga0208562_10544021	3300025460	Peatland	TLKTARLQFDTRLAEVLIGRSDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPGKQVSRGN
Ga0209385_10197193	3300025650	Arctic Peat Soil	MQISLKDTLKTARLSFDARLAEVLIGRPDLPYNEIEKDFGISETVIRRVAKQFNIGARKRGPKPGGLTKAQKQAV
Ga0208043_10428272	3300027570	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV
Ga0208324_10440722	3300027604	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV
Ga0208827_11523942	3300027641	Peatlands Soil	DTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV
Ga0209039_100088032	3300027825	Bog Forest Soil	MQISLKNTLKTARLSFDARLAEVLIARPDLSYTHIGREFGISETVIRRVMKQFSLAARKRGPKPGQQKAWGPTK
Ga0209517_1000213810	3300027854	Peatlands Soil	MQISLRDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV
Ga0209517_1001196710	3300027854	Peatlands Soil	MQISLKNTLKTARLSFDARLAEVLIGRPDLSYTEIEKDFGISETVIRRVMKQFSIGVRKRGPKPGKRVSRG
Ga0209067_100051152	3300027898	Watersheds	MQISLKNTLKTARLGFDARLAEVLIGRPDLPYSQIEKDFGISETVIRRVMKQFSIGARKRGPKPGKREAGEPTK
Ga0209415_100279795	3300027905	Peatlands Soil	MQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQPATEKP
Ga0209415_101584112	3300027905	Peatlands Soil	MQISLKDTLKTARLGFDSRLAEVLIARPDLTYTQIEKDFGISETVIRRVMKQYSIGARKRGPKPGKHDTQQSREPKAVSRG
Ga0209698_1003090411	3300027911	Watersheds	MQISLKNTLKTARLSFDARLAEMLIARPDLSYTNIGKEFGVSETVIRRVMKQFSIGARKRGPKPGKSQRKVLRG
Ga0209698_100523766	3300027911	Watersheds	MQISLKDTFKTARLQFDTRLAEVLITRPDLSYAEIQKDFGISETVIRRVMKLYSIGARKRGPKPGKQETQQNREPKEVSRG
Ga0209698_100583971	3300027911	Watersheds	MPIKQIKQVNLRDELMRVRLSFDTQLAEVLVGRPDLTYVQIEKEFGISEKVIRRVTKQFNIGARKRGPKSGQEPRV
Ga0209698_101882622	3300027911	Watersheds	MQISLKNTLKTARLGFDARLAEVLIARPDLSYAQIEKDFGISETVIRRVMRQFNIGARKRGPKPGKPQRQVSRG
Ga0210275_101989801	3300030578	Soil	VQIEQINLRDRLDQVRLSFDARLAEILISRPDLDYAHIQKEFGISEKVIRRVAKQFRIGARKRGPKPGN
Ga0316363_103609471	3300030659	Peatlands Soil	GMQISLRDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPKRQAVV
Ga0311301_1000615338	3300032160	Peatlands Soil	MRMQISLKDTLKTARLNFDARLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIGARKRGPKPRKQAVV
Ga0311301_100764405	3300032160	Peatlands Soil	MQISLRDTLKTARLDFDNQLAKVLIGRPDLSYTEIEKDFGISETVIRRVMKQFNIGARKRGPKPRQQKAEELAK
Ga0335085_100098385	3300032770	Soil	MQISLKNTLKAARLQFDTRLAEVLIARPDLSYTDIGKDFGISETVIRRVMKQFNIGARKRGPKGKKIGA
Ga0335078_105288312	3300032805	Soil	MQISLKDTLKSARLDFDSRLAKVLVGRPDLSYTKIQKDFGISETVIRRVMKQFGIGARKRGPKPESVKERAASR
Ga0335070_100240983	3300032829	Soil	MQISLKDTLKTARLSFDTRLAEVLIGRPDLSYTQIEKEFGISETVIRRVMKQFNIRARKRGPKPKRQAVM
Ga0335073_112637991	3300033134	Soil	MQISLENTLKTARLSFDARLAEVLIGRPDLTYTQIQKEFGISETVIRRVMKVFNIGARRRGPKPKQQNAGG
Ga0335077_104508823	3300033158	Soil	MQISLKDTLKTARLDFDNQLAKVLIARPDLSYTQIEKDFGISETVIRRVMKQFNIAARKRGPKGKKIGA
Ga0335077_106126361	3300033158	Soil	MQISLKNTLKAARLQFDTRLAEVLIARPDLSYTDIGKDFGISETVIRRVMKQFNIGARKR
Ga0326727_108071522	3300033405	Peat Soil	MHISLKDTLKTARLQFDTRLAEVLIARPDLSYTQIEKDFGISETVIRRVMKQFSIGARKRGPKPGKREAGEPTK
Ga0334792_002130_9538_9762	3300033888	Soil	MQIEQINLRDKLDRARLSFDTQLAEVLVGRPDVGYAQIEEEFGISEKVIRRVMKQFNIGARKRGPKPKQQGPNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences