NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F096825

Metagenome / Metatranscriptome Family F096825

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096825
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 105 residues
Representative Sequence MKAKKAVKRLGKVETLLSNVIDQYAKGVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Number of Associated Samples 85
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.02 %
% of genes near scaffold ends (potentially truncated) 41.35 %
% of genes from short scaffolds (< 2000 bps) 93.27 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.538 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.769 % of family members)
Environment Ontology (ENVO) Unclassified
(35.577 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.115 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.55%    β-sheet: 1.46%    Coil/Unstructured: 45.99%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00474SSF 20.19
PF13561adh_short_C2 9.62
PF13620CarboxypepD_reg 2.88
PF02746MR_MLE_N 0.96
PF03459TOBE 0.96
PF01436NHL 0.96
PF04389Peptidase_M28 0.96
PF09723Zn-ribbon_8 0.96
PF00005ABC_tran 0.96
PF03576Peptidase_S58 0.96
PF05787DUF839 0.96
PF01408GFO_IDH_MocA 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG3191L-aminopeptidase/D-esteraseAmino acid transport and metabolism [E] 1.92
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 1.92
COG3211Secreted phosphatase, PhoX familyGeneral function prediction only [R] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.54 %
UnclassifiedrootN/A38.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps_contig06938.4676All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2519Open in IMG/M
3300004103|Ga0058903_1267567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae567Open in IMG/M
3300004104|Ga0058891_1541543All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300004798|Ga0058859_10459955All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter538Open in IMG/M
3300005294|Ga0065705_10205843All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1400Open in IMG/M
3300005332|Ga0066388_101559957All Organisms → cellular organisms → Bacteria → Acidobacteria1159Open in IMG/M
3300005436|Ga0070713_102248868All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300005437|Ga0070710_11450289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus514Open in IMG/M
3300005459|Ga0068867_101752962All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium583Open in IMG/M
3300005518|Ga0070699_100052613All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3523Open in IMG/M
3300005536|Ga0070697_101484367All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium606Open in IMG/M
3300005577|Ga0068857_101944973All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300006049|Ga0075417_10214284Not Available915Open in IMG/M
3300006844|Ga0075428_101301964All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia764Open in IMG/M
3300006844|Ga0075428_101469767Not Available714Open in IMG/M
3300006904|Ga0075424_101874924Not Available633Open in IMG/M
3300007255|Ga0099791_10448117All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia624Open in IMG/M
3300009038|Ga0099829_10279034Not Available1367Open in IMG/M
3300009038|Ga0099829_11434353Not Available570Open in IMG/M
3300009089|Ga0099828_10701472Not Available909Open in IMG/M
3300009089|Ga0099828_11820704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium534Open in IMG/M
3300009090|Ga0099827_10303376Not Available1351Open in IMG/M
3300009090|Ga0099827_10660433All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300009100|Ga0075418_11056910All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300009143|Ga0099792_10659744Not Available673Open in IMG/M
3300009147|Ga0114129_10057429All Organisms → cellular organisms → Bacteria5446Open in IMG/M
3300009147|Ga0114129_10189221All Organisms → cellular organisms → Bacteria2796Open in IMG/M
3300009521|Ga0116222_1482302Not Available542Open in IMG/M
3300009789|Ga0126307_10737033Not Available795Open in IMG/M
3300010376|Ga0126381_104601727Not Available532Open in IMG/M
3300010379|Ga0136449_100975203All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA21369Open in IMG/M
3300010379|Ga0136449_101007775All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1339Open in IMG/M
3300010379|Ga0136449_101263933Not Available1155Open in IMG/M
3300010865|Ga0126346_1305238All Organisms → cellular organisms → Bacteria → Acidobacteria912Open in IMG/M
3300011120|Ga0150983_10229979All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300011120|Ga0150983_10861866All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300011120|Ga0150983_11722235Not Available512Open in IMG/M
3300011120|Ga0150983_12066247All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300011120|Ga0150983_12474195Not Available742Open in IMG/M
3300011120|Ga0150983_12640125All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300011120|Ga0150983_12695083All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300011120|Ga0150983_13876011Not Available698Open in IMG/M
3300011120|Ga0150983_16485957All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300011269|Ga0137392_11191456Not Available620Open in IMG/M
3300011270|Ga0137391_10991508All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300012096|Ga0137389_10695637All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300012189|Ga0137388_10373775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1317Open in IMG/M
3300012199|Ga0137383_10136508All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1793Open in IMG/M
3300012200|Ga0137382_10353857All Organisms → cellular organisms → Bacteria → Acidobacteria1030Open in IMG/M
3300012202|Ga0137363_10904027All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300012207|Ga0137381_11566381All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium550Open in IMG/M
3300012208|Ga0137376_10030709All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4258Open in IMG/M
3300012210|Ga0137378_11291261All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012350|Ga0137372_10937634Not Available610Open in IMG/M
3300012357|Ga0137384_11008314All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae669Open in IMG/M
3300012683|Ga0137398_10385337All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300012917|Ga0137395_10305986All Organisms → cellular organisms → Bacteria → Acidobacteria1127Open in IMG/M
3300012922|Ga0137394_11085778All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium663Open in IMG/M
3300012923|Ga0137359_10675765Not Available901Open in IMG/M
3300012929|Ga0137404_11758055Not Available576Open in IMG/M
3300012944|Ga0137410_10292373All Organisms → cellular organisms → Bacteria → Acidobacteria1288Open in IMG/M
3300012944|Ga0137410_10715797Not Available835Open in IMG/M
3300012948|Ga0126375_10011073All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales3815Open in IMG/M
3300015241|Ga0137418_10521752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia946Open in IMG/M
3300015245|Ga0137409_10361450Not Available1264Open in IMG/M
3300018433|Ga0066667_11376594Not Available619Open in IMG/M
3300019888|Ga0193751_1270514Not Available508Open in IMG/M
3300019890|Ga0193728_1310612Not Available591Open in IMG/M
3300020579|Ga0210407_10858516Not Available698Open in IMG/M
3300020583|Ga0210401_10746548All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300021088|Ga0210404_10809461Not Available535Open in IMG/M
3300021168|Ga0210406_10160756All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300021170|Ga0210400_11033764All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300021478|Ga0210402_11182638Not Available692Open in IMG/M
3300021479|Ga0210410_11518883Not Available563Open in IMG/M
3300021559|Ga0210409_11730415Not Available502Open in IMG/M
3300022504|Ga0242642_1047785All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300022504|Ga0242642_1092620All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300022507|Ga0222729_1042599All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300022531|Ga0242660_1173050All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300022532|Ga0242655_10238375All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300022533|Ga0242662_10162048All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300022712|Ga0242653_1105601Not Available520Open in IMG/M
3300022713|Ga0242677_1031844All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300022724|Ga0242665_10084965All Organisms → cellular organisms → Bacteria → Acidobacteria912Open in IMG/M
3300022724|Ga0242665_10401742All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300022726|Ga0242654_10281525All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300025928|Ga0207700_11102309All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300027846|Ga0209180_10313448Not Available898Open in IMG/M
3300027857|Ga0209166_10722393All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300027862|Ga0209701_10625894All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300027903|Ga0209488_10913383Not Available615Open in IMG/M
3300027909|Ga0209382_10815984Not Available991Open in IMG/M
3300028906|Ga0308309_10441589All Organisms → cellular organisms → Bacteria → Acidobacteria1120Open in IMG/M
3300031231|Ga0170824_105983271All Organisms → cellular organisms → Bacteria → Acidobacteria782Open in IMG/M
3300031231|Ga0170824_114696575Not Available604Open in IMG/M
3300031234|Ga0302325_12995236Not Available546Open in IMG/M
3300031421|Ga0308194_10355685Not Available523Open in IMG/M
3300031474|Ga0170818_102666052All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300031754|Ga0307475_11431302Not Available532Open in IMG/M
3300031823|Ga0307478_11304178Not Available604Open in IMG/M
3300031962|Ga0307479_11079309All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus770Open in IMG/M
3300032160|Ga0311301_11506429Not Available828Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.27%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.58%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.69%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.88%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.96%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.96%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.96%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.96%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_005727102199352024SoilMKAKKAVKRLTKVESLLTNVIDQFAAGEDAVRELLDSAKATVIRAKETVSLQTSSVSPKKPPVKAQSTKRPGLSAAGRKKLSIAAKKRWAIAKKKGVSAVTGRPLTKTA
Ga0058903_126756723300004103Forest SoilMKAKKAVKRLSKVETLLSSVIDQFAASVDGVRDLLDSAKGSVVRAVEAVNLHSSTAAPKKPPVKAQETKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0058891_154154313300004104Forest SoilLGKVETLLSIVIDQYAAGVDSVKELLDSAKASVVRAREAVNVHSSTAAPKKPPVKAQEPKRKGLSAAGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0058859_1045995513300004798Host-AssociatedMKAKKALKRLTRVETLLSDVVDQYGAIKPDVRELLDSAKASVARARETVDPKASGKAAKKPPLKAGKSKAGLTAEGRKKLSAAAKKRWAIAKRKGISAVTGRPLSQTA*
Ga0065705_1020584313300005294Switchgrass RhizosphereMKVKKAVKRLARVEALLTNVIDQYTGNGNSVKELLGSAKQSVVRAKETVNQQASSNAEKKPPVRAGKPLRRRLTAEGRKRLSLAAKKRWAVAKRKGINASTGRPLSKTA*
Ga0066388_10155995713300005332Tropical Forest SoilSQDSVRELLDSARASVIQAKDAVSQQSAPAKKPPVKAEEPRRRRLSAAGRKRLSIAAKKRWAMAKAKGVSAVTGRPLVKTA*
Ga0070713_10224886823300005436Corn, Switchgrass And Miscanthus RhizosphereIDQYAKSVDNVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRRLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0070710_1145028913300005437Corn, Switchgrass And Miscanthus RhizosphereMKAKKAVKRLGKVETLLSNVIDQYAKSVDNVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRRLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0068867_10175296213300005459Miscanthus RhizosphereMKAKKALKRLTRVETLLSNVVDQFAAIKPNVRELLDSAKASVARAMQTVDVKASAKVAKKPPVKAEKSKAGLTAEGRKKLSVAAKKRWAIAKR
Ga0070699_10005261323300005518Corn, Switchgrass And Miscanthus RhizosphereMKAKKAVKRLNRVEALLSNVIDGFAAGERAIKELLDSAKAAVIRARKTVSVKTPPAIEKKPPVKARSAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0070697_10148436723300005536Corn, Switchgrass And Miscanthus RhizosphereMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKT
Ga0068857_10194497323300005577Corn RhizosphereMKAKKALKRLTRVETLLSDVVDQYGAIKADVRELLDSAKASVARARETVDLKASGKAAKKPPLKAGKSKAGLTAEGRKKLSAAAKKQWAIAKRKGISAVTGRPLSQTA*
Ga0075417_1021428413300006049Populus RhizosphereMKAKKAVKRLTRVEALLSNVIDQYTGNGNPVKELLGSAKESVVRARETVHQQASSNAEKKPPVRAGKPLRRRLTAEGRKRLSLAARKRWAVAKRKGINASTGRPLSKTA*
Ga0075428_10130196423300006844Populus RhizosphereMKAKKAVKRLNRVEALLSNVIDGFAAGERAIKELLDSAKAAVIRARKTVSVKTTPPAIEKKPPVKARSAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0075428_10146976723300006844Populus RhizosphereMKAKKAVKRLTRVEALLSNVIDGFTTGERAVKELLDNAKAAVIRARETVNVKASPAEKKPPVKARSAKSRLTAEGRKRLSLAAKKRWAIAKRKGVSAVTGRPLAKTA*
Ga0075424_10187492423300006904Populus RhizosphereMKAKKAVKKLTRVEALLSNVIDQYTGNGRSVAELLDSAKESVIRAKERVSIQASSRAAKKPPAKAEKSNGRHLTAEGRKRLSLAAKKRWVIAKRKGISAVTGRPLSKTA*
Ga0099791_1044811713300007255Vadose Zone SoilKAKKALKRLTRVETLLSSVIDQYAANASDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLTAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0099829_1027903423300009038Vadose Zone SoilMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPAVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0099829_1143435323300009038Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYASNDSGVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKPRLSAEGRKRLSLAAKKRWAVAKRNGVSAVTGRPLSKTA*
Ga0099828_1070147213300009089Vadose Zone SoilGAVMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPAVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0099828_1182070423300009089Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYAANENDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGV
Ga0099827_1030337633300009090Vadose Zone SoilRNPKGAVMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVIRARETVNVKASPAVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0099827_1066043313300009090Vadose Zone SoilTLLSSVIDQYAANASDVRELLDAAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0075418_1105691013300009100Populus RhizosphereMKAKKALKRLTRVETLLSDVVDQYAAIEPDVRALLDSAKASVVRARETVDVKASPKAAKKPPVKAEKSKVGLTAEGRKKLSLAAKKRWAIAKCKNDTAAT
Ga0099792_1065974413300009143Vadose Zone SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0114129_1005742933300009147Populus RhizosphereMKAKKAVKRLTRVEALLSNVIDGFATGERAVKELLDNAKAAVIRARETVNVKASPAAEKKPPVKVSSAKSRLTAEGRKKLSLAAKKRWAIAKRKGVSAVTGRPLAKTA*
Ga0114129_1018922133300009147Populus RhizosphereMKAKKALKRLTRVETLLSDVVDQYAAIEPDVRALLDSAKASVVRARETVDVKVSPKAAKKPPVKAEKSKVGLTAEGRKKLSLAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0116222_148230213300009521Peatlands SoilMKAKKALKRLTRVETLISTVIDQYAAGEHGMRELLDTAKASIIRAKETVAQQASPQPAKKPPVRADKPKRRNLTAEGRKRISLAAKKRWAAAKRNGIHAVTGRPLSKTA*
Ga0126307_1073703313300009789Serpentine SoilMKAKKAVKRLNKVEALLSNVIDGFAAGERAVKELLDSAKAAVVRARETVNIKTAPVVEKKPPVKARSVKSRITAEGRKKLSLAAKKRWAAAKRKGVSAVTGRPLAKTA*
Ga0126381_10460172723300010376Tropical Forest SoilMKAKIVLKRLTRVEALLSTVIDQYAANGHGLREFLDRARASVVSAKEMVNLQASPRPAKKPWATADNSDRRHLTAEGRKRISIAAKKRWAAAKRKGIHAVTGRPLSKTA*
Ga0136449_10097520323300010379Peatlands SoilMKTKKALKRLTRVETLLSTVIDQYAASEHRVRELLDTAKASIIRAKETVAQQASPQPAKKPPVRADKPKRRNLTAEGRKRISLAAKKRWAAAKRNGIHAVTGRPLSKTA*
Ga0136449_10100777533300010379Peatlands SoilMKAKKAVKRLARVEALLSNVIDQYGGNEQGLKELLDSAKESVVRAKEAVNPQASTTATKKPPAKSEKPKRRGLTAEGRKRLSLAAKKRWAI
Ga0136449_10126393313300010379Peatlands SoilMKAKKALKRLTRVETLISTVIDQYAAGEHGMRELLDTAKASIIRAKETVALQASPRPAKKPPARADKPKRRNLTAEGRKRISLAVKKRWAAAKRKGIHAVTGRPLSKTA*
Ga0126346_130523823300010865Boreal Forest SoilIMKAKKAVKRLGKVESLLSNVIDQYVPSVDSVRELLDSAKASVVRAMEAVSLQSSTVASKKPPVKAEAPKRRGLSAQGRKRLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0150983_1022997923300011120Forest SoilSVMKAKKAVKRLGKVETLLSIVIDQYAAGVDSVKELLDSAKASVVRAREAVNVHSSTAAPKKPPVKAQEPKRKGLSAAGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0150983_1086186623300011120Forest SoilAKKAVKRLGKVETLLSNVIDQYAKGVDNVRELLDSAKASVLRAVEAVNLQSSAVAPKKPPVKAQEPKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLTKTA*
Ga0150983_1172223513300011120Forest SoilMKAKKAVKRLGKVESLLSNVIDQYVPSVDSVRELLDSAKASVVRAMEAVSLQSSTVAPKKPLVKAEAPKRRGLSAQGRKRLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0150983_1206624723300011120Forest SoilKAKKAVKRLGKVETLLSSVIDQFAASVDGVRDLLDSAKGSVIRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0150983_1247419513300011120Forest SoilSMKAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVSAVTGRPLRKTA*
Ga0150983_1264012523300011120Forest SoilMKAKKAVKRLSKVESLLSNVIDQYVPSVDSVRELLDSAKASIVRAMEAVSLQSSTPKKPPVKAEAPKRRGLSAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKSA*
Ga0150983_1269508313300011120Forest SoilMKAKKAVKRLGKVESLLSNVIDQYGKGADSVRELLDSAKASVVRAREAVSLQSSTVAPKKPPVKAEAPKRRGLSAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKSA*
Ga0150983_1387601123300011120Forest SoilFIMKAKKAVKRLSKVETLLSSVIDQFAASVDGVRDLLDSAKGSVVRAVEAVNLHSSTAAPKKPPVKAQETKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0150983_1648595723300011120Forest SoilIMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137392_1119145623300011269Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYAANENDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0137391_1099150813300011270Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYAANENDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAV
Ga0137389_1069563713300012096Vadose Zone SoilMKAKKALKRLTRVEAMLSNVIDQYAASGRDVRELLDSARASVVRAKETLNGKASPRAANKPPAKAENSSKSHLTAEGRKKLSLAAKKRWAIAKRKGVSAVTGRPLSKTA*
Ga0137388_1037377533300012189Vadose Zone SoilMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPAVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLA
Ga0137383_1013650823300012199Vadose Zone SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137382_1035385723300012200Vadose Zone SoilMKAKKAIKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137363_1090402723300012202Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYASNESDVRELLGAAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0137381_1156638123300012207Vadose Zone SoilMKAKKALKRLTRVETLLSSVIEQYASNVSDVRELLDSAKVSVGRAKETVDLKAAPKAVKKPPVKARNSKRRLTAEGRKKISLAAKKRWAI
Ga0137376_1003070933300012208Vadose Zone SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVVRAVETVSAHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137378_1129126123300012210Vadose Zone SoilMKAKKALKRLTRVETLLSSVIEQYASNESDVRELLDSAKASVVRAKETVDLKAAPKAVKKPPVKARNSKRRLTAEGRKKISLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0137372_1093763423300012350Vadose Zone SoilMDKWYNRTIKGAVMKAKKALKRLSRVEALLSDVIDQYAAGDGDMRELLDNARASVVRARETLNGKPSPGTAKKAKAPATVPNANKSRLSSEGRKKLSLAAKKRWAAAKRKGVSAVTGRPLSKTA*
Ga0137384_1100831423300012357Vadose Zone SoilMKAKKALKRLTRVETLLSNVIDQYASNDSGMRELLDAAKASVGRAKETVDLKAAPKAVKKPPVKARNSKRRLTAEGRKKISLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0137398_1038533713300012683Vadose Zone SoilRTLGVVIMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137395_1030598623300012917Vadose Zone SoilGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA*
Ga0137394_1108577813300012922Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYASNVSDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLGKTA*
Ga0137359_1067576523300012923Vadose Zone SoilMKAKKAVKRLTKVEVLLSDVIEQYAAGQNGVRELLGSAKQSVVQAKETMNSQASSGAGKKPPVKAQEPKSRGLTAEGRKKLSLAAKKRWAAAKRRGISAVTGRPLTNTA*
Ga0137404_1175805513300012929Vadose Zone SoilMKAKKALKRLTRVERLLSSVIDQYAAHASDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLGKTA*
Ga0137410_1029237323300012944Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYAANASDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA*
Ga0137410_1071579713300012944Vadose Zone SoilIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPSVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0126375_1001107313300012948Tropical Forest SoilMKAKKALKRLTRVETLLSSVIDQYAANGSSLRELLDSAKASVGSAKETVDLKAAPKAAKKPPVKADSSKRRLSAEGRKKISQAAKRRWAIAKRSGVSAVTGRPLNKTA*
Ga0137418_1052175233300015241Vadose Zone SoilMKAKKALKRLTRVETLLSNVIDQYASNESDVRELLDSAKASVGRAKETVDVKVAPKAAKKPPVKAGNSKRRLTAEGRKKLSLAAKKRWAIAKRNGVSAVTERPLGKTA*
Ga0137409_1036145033300015245Vadose Zone SoilMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPSVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA*
Ga0066667_1137659423300018433Grasslands SoilSDVRELLDSAKASVGRAEETVDLKAAPKAAKKPPVKAGSSKRRLSAEGREKLSLAAKKRWAIAKRNGVSAVTGRPLGKTA
Ga0193751_127051413300019888SoilMKAKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQSSAVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0193728_131061213300019890SoilMKAKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKARETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0210407_1085851613300020579SoilMKAKKAVKRLGKVETLLSNVIDQYAKGVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0210401_1074654813300020583SoilMKAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVSAVTGRPLRKTA
Ga0210404_1080946123300021088SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0210406_1016075633300021168SoilMKAKKAVKRLGKVETLLSSVIDQFAASVDGVRDLLDSAKGSVIKAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0210400_1103376423300021170SoilAVKRLGKVETLLSSVIDQFAASVDGVRDLLDSAKGSVIRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0210402_1118263823300021478SoilMKAKKAVKRLGKVETLLSNVIDQYAKSVDNVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0210410_1151888313300021479SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSK
Ga0210409_1173041523300021559SoilMKAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVSAVTGRPLSKTA
Ga0242642_104778523300022504SoilVIMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0242642_109262013300022504SoilAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVSAVTGRPLRKTA
Ga0222729_104259913300022507SoilKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0242660_117305023300022531SoilVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGSKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0242655_1023837513300022532SoilAKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKARETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0242662_1016204813300022533SoilAVKRLGKVESLLSNVIDQYGKGADSVRELLDSAKASVVRAREAVSLQSSTVAPKKPPVKAEAPKRRGLSAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0242653_110560123300022712SoilKAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVSAVTGRPLRKTA
Ga0242677_103184423300022713SoilMKAKKAVKRLGKVESLLSNVIDQYVPSVDSVRELLDSAKASVVRAMEAVSLQSSTGAPKKPPVKAEAPKRRGLSAQGRKRLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0242665_1008496513300022724SoilMKAKKAVKRLGKVESLLSNVIDQYVPSVDSVRELLDSAKASIVRAMEAVSLQSSTPKKPPVKAEAPKRRGLSAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKSA
Ga0242665_1040174223300022724SoilDGVRELLDSAKASVARAVEAVNVHSSSAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0242654_1028152523300022726SoilDQFAASVDGVRDLLDSAKGSVIRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0207700_1110230913300025928Corn, Switchgrass And Miscanthus RhizosphereKRLGKVETLLSNVIDQYAKSVDNVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRRLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0209180_1031344823300027846Vadose Zone SoilMKAKKAVKRLTRVEALLSNVIDGFAAGERAVKELLDNAKAAVVRARETVNVKASPAVEKKPPVRARKAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA
Ga0209166_1072239323300027857Surface SoilEDAVRELLDSAKATVIRAKETVSLQTSSVSPKKPPVKAQSTKRPGLSAAGRKKLSIAAKKRWAIAKKKGVSAVTGRPLTKTA
Ga0209701_1062589413300027862Vadose Zone SoilMKAKKALKRLTRVETLLSSVIDQYAANENDVRELLDSAKASVGRAKETVDLKAAPKAAKKPPVKAGNSKRRLSAEGRKKLSLAAKKRWAIAKRNGVSAVTGRPLSKTA
Ga0209488_1091338313300027903Vadose Zone SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVNVHSSAAAPKKPPVKAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0209382_1081598423300027909Populus RhizosphereMKAKKAVKRLNRVEALLSNVIDGFAAGERAIKELLDSAKAAVIRARKTVSVKTTPPAIEKKPPVKARSAKSRITAEGRKKLSLAAKKRWAVAKRKGVSAVTGRPLAKTA
Ga0308309_1044158913300028906SoilMKAKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDVAKASVVRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAAGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0170824_10598327113300031231Forest SoilKASVVRAMEAVSVQPSTAAPKKPPVKAHETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0170824_11469657513300031231Forest SoilMKAKKAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQSSTVAPKKPPVKAQETKRRGLSAEGRKKLSIAAKKRWAIAKRKGISAVTGRPLSNTA
Ga0302325_1299523623300031234PalsaMKAKKALKRLSRVEDLLSDVIEQYATPQTDLRELLDSARTSVVSAKSAVNLQASPEAAKKPPAKAQKPKRNLTAEGRKRISLAAKKRWAAAKRNGVSAVTGRPLGKTA
Ga0308194_1035568513300031421SoilMKAKKAVKRLGKVETLLSGVIDQFAASVDGVRELLDSAKASVARAVEAVSAHSSTAAPKKPPVTAQEPKRRGISAQGRKKLSIAAKKRWAIAKRKGISAVTGRPLSKTA
Ga0170818_10266605213300031474Forest SoilAVKRLGKVETLLSNVIDQYAKSVDSVRELLDSAKASVVRAMEAVSVQPSTAAPKKPPVKAHETKRRGLSAEGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0307475_1143130213300031754Hardwood Forest SoilMKAKKAAKRLTRVETLLSNVIDQYAANEDSVRELLDSARSSVVRAKEAVSLQSAPAAAKKPPVKAREPKRRRLSAQGRKKLSIAAKKRWAIAKSKGVS
Ga0307478_1130417813300031823Hardwood Forest SoilMKAKKAVKRLGKVETLLSSVIDQFAASVDGVRDLLDSAKGSVVRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKKLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0307479_1107930923300031962Hardwood Forest SoilMKAKKAVKRLGKVETLLSSVIDQFAASVDGVRDLLDSAKGSVIRAVEAVNLHSSTAAPKKPPVKAQEPKRRGLSAQGRKRLSIAAKKRWAIAKRKGVSAVTGRPLSKTA
Ga0311301_1150642923300032160Peatlands SoilMKAKKALKRLTRVETLISTVIDQYAAGEHGMRELLDTAKASIIRAKETVALQASPRPAKKPPARADKPKRRNLTAEGRKRISLAVKKRWAAAKRKGIHAVTGRPLSKTA
Ga0335079_1188500913300032783SoilMKAKKALKRLGKAEAILENVIDQYAGETSVKALLGTAKASLVRAKEVVDSTAAARKPPAKANKSRRGGLTAAGRKKLSIAAKKRWAVAKRKGVHAVTGRPLSKIA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.