Metagenome Family F096823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096823
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	79 residues
Representative Sequence	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Number of Associated Samples	82
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	14.56 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.231 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (23.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.91% β-sheet: 0.00% Coil/Unstructured: 53.09%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14947	HTH_45	1.92
PF02518	HATPase_c	1.92
PF00072	Response_reg	0.96
PF01400	Astacin	0.96
PF01638	HxlR	0.96
PF13483	Lactamase_B_3	0.96
PF00582	Usp	0.96
PF03600	CitMHS	0.96
PF00324	AA_permease	0.96
PF01544	CorA	0.96
PF12800	Fer4_4	0.96
PF02384	N6_Mtase	0.96
PF13520	AA_permease_2	0.96
PF12161	HsdM_N	0.96
PF05974	DUF892	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.96
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.96
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.96
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.96
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
All Organisms	root	All Organisms	30.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
cellular organisms	root	All Organisms → cellular organisms	26.92 %
Viruses	superkingdom	All Organisms → Viruses	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	24.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	13.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	13.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1.92 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.96 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.96 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	2.88 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	1.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.23 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	4.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.85 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2.88 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.96 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003987\|Ga0055471_10007066	Not Available	2271	Open in IMG/M
3300003997\|Ga0055466_10263299	Not Available	521	Open in IMG/M
3300003998\|Ga0055472_10037643	Not Available	1167	Open in IMG/M
3300004013\|Ga0055465_10032545	All Organisms → cellular organisms → Archaea	1299	Open in IMG/M
3300004480\|Ga0062592_101839366	Not Available	593	Open in IMG/M
3300006844\|Ga0075428_101799647	Not Available	638	Open in IMG/M
3300006846\|Ga0075430_100077378	All Organisms → cellular organisms → Archaea	2788	Open in IMG/M
3300006846\|Ga0075430_101096366	Not Available	656	Open in IMG/M
3300006847\|Ga0075431_100889647	Not Available	860	Open in IMG/M
3300006853\|Ga0075420_101261938	Not Available	634	Open in IMG/M
3300006876\|Ga0079217_10081383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1403	Open in IMG/M
3300006876\|Ga0079217_10658360	Not Available	694	Open in IMG/M
3300006880\|Ga0075429_101014199	Not Available	725	Open in IMG/M
3300006894\|Ga0079215_10110040	Not Available	1234	Open in IMG/M
3300006918\|Ga0079216_10163924	Not Available	1175	Open in IMG/M
3300006969\|Ga0075419_10387439	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
3300007004\|Ga0079218_10398777	Not Available	1170	Open in IMG/M
3300007918\|Ga0111545_1082884	Not Available	549	Open in IMG/M
3300009094\|Ga0111539_13233795	Not Available	525	Open in IMG/M
3300009100\|Ga0075418_10258466	Not Available	1855	Open in IMG/M
3300009146\|Ga0105091_10231881	Not Available	887	Open in IMG/M
3300009147\|Ga0114129_12714801	Not Available	590	Open in IMG/M
3300009168\|Ga0105104_10006721	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	7680	Open in IMG/M
3300009168\|Ga0105104_10013990	Not Available	4911	Open in IMG/M
3300009176\|Ga0105242_12089656	Not Available	610	Open in IMG/M
3300009406\|Ga0116587_1064513	Not Available	626	Open in IMG/M
3300009553\|Ga0105249_12658707	Not Available	573	Open in IMG/M
3300009789\|Ga0126307_10091290	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300009789\|Ga0126307_10163305	Not Available	1784	Open in IMG/M
3300009789\|Ga0126307_10577446	Not Available	908	Open in IMG/M
3300009840\|Ga0126313_10105131	All Organisms → cellular organisms → Archaea	2083	Open in IMG/M
3300009840\|Ga0126313_10179991	Not Available	1614	Open in IMG/M
3300010036\|Ga0126305_10699924	Not Available	685	Open in IMG/M
3300010037\|Ga0126304_10721501	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300010037\|Ga0126304_10859630	Not Available	616	Open in IMG/M
3300010038\|Ga0126315_10836067	Not Available	608	Open in IMG/M
3300010039\|Ga0126309_10532915	Not Available	728	Open in IMG/M
3300010041\|Ga0126312_10428832	Not Available	942	Open in IMG/M
3300010041\|Ga0126312_10765843	Not Available	699	Open in IMG/M
3300010045\|Ga0126311_10703682	Not Available	808	Open in IMG/M
3300010166\|Ga0126306_10029665	All Organisms → cellular organisms → Archaea	3688	Open in IMG/M
3300013096\|Ga0157307_1037583	Not Available	864	Open in IMG/M
3300014259\|Ga0075311_1082309	Not Available	666	Open in IMG/M
3300014265\|Ga0075314_1151217	Not Available	539	Open in IMG/M
3300014311\|Ga0075322_1000714	Not Available	4750	Open in IMG/M
3300015371\|Ga0132258_13655900	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300015372\|Ga0132256_101448861	Not Available	798	Open in IMG/M
3300015373\|Ga0132257_102496288	Not Available	671	Open in IMG/M
3300018073\|Ga0184624_10017968	All Organisms → cellular organisms → Archaea	2594	Open in IMG/M
3300018081\|Ga0184625_10669244	Not Available	501	Open in IMG/M
3300018082\|Ga0184639_10349479	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	771	Open in IMG/M
3300018432\|Ga0190275_10042862	Not Available	3730	Open in IMG/M
3300018465\|Ga0190269_10744316	Not Available	694	Open in IMG/M
3300018466\|Ga0190268_10133578	Not Available	1231	Open in IMG/M
3300018466\|Ga0190268_10382305	Not Available	895	Open in IMG/M
3300018469\|Ga0190270_10542116	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1120	Open in IMG/M
3300018469\|Ga0190270_10813020	Not Available	943	Open in IMG/M
3300018469\|Ga0190270_10930177	Not Available	890	Open in IMG/M
3300018469\|Ga0190270_11197683	Not Available	798	Open in IMG/M
3300018469\|Ga0190270_13194736	Not Available	519	Open in IMG/M
3300018469\|Ga0190270_13270027	Not Available	514	Open in IMG/M
3300018476\|Ga0190274_10102531	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300018481\|Ga0190271_10038235	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3961	Open in IMG/M
3300018481\|Ga0190271_10394574	Not Available	1477	Open in IMG/M
3300018920\|Ga0190273_10141208	Not Available	1423	Open in IMG/M
3300019356\|Ga0173481_10115518	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1056	Open in IMG/M
3300019767\|Ga0190267_10215071	Not Available	916	Open in IMG/M
3300019884\|Ga0193741_1005495	Not Available	3384	Open in IMG/M
3300021972\|Ga0193737_1064287	Not Available	517	Open in IMG/M
3300025165\|Ga0209108_10151111	All Organisms → cellular organisms → Archaea	1224	Open in IMG/M
3300025537\|Ga0210061_1019542	Not Available	1099	Open in IMG/M
3300025537\|Ga0210061_1096501	Not Available	522	Open in IMG/M
3300025559\|Ga0210087_1017979	All Organisms → cellular organisms → Archaea	1452	Open in IMG/M
3300025567\|Ga0210076_1008046	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2304	Open in IMG/M
3300025791\|Ga0210115_1021487	Not Available	1461	Open in IMG/M
3300025792\|Ga0210143_1001480	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	5368	Open in IMG/M
3300025795\|Ga0210114_1005950	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2899	Open in IMG/M
3300025795\|Ga0210114_1092603	Not Available	614	Open in IMG/M
3300025938\|Ga0207704_11271944	Not Available	628	Open in IMG/M
3300026089\|Ga0207648_11183555	Not Available	718	Open in IMG/M
3300026535\|Ga0256867_10045508	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1789	Open in IMG/M
3300027075\|Ga0214467_1012695	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	873	Open in IMG/M
3300027636\|Ga0214469_1033590	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1657	Open in IMG/M
3300027637\|Ga0209818_1180079	Not Available	608	Open in IMG/M
3300027650\|Ga0256866_1015635	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1905	Open in IMG/M
3300027743\|Ga0209593_10032285	Not Available	2070	Open in IMG/M
3300027743\|Ga0209593_10032524	All Organisms → Viruses → Predicted Viral	2061	Open in IMG/M
3300027743\|Ga0209593_10208029	Not Available	688	Open in IMG/M
3300027907\|Ga0207428_10152889	Not Available	1756	Open in IMG/M
3300028578\|Ga0272482_10178738	Not Available	642	Open in IMG/M
3300030006\|Ga0299907_10417716	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1074	Open in IMG/M
3300030606\|Ga0299906_11019034	Not Available	605	Open in IMG/M
3300031228\|Ga0299914_10164390	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1968	Open in IMG/M
3300031547\|Ga0310887_10115821	All Organisms → cellular organisms → Archaea	1354	Open in IMG/M
3300031547\|Ga0310887_10177850	Not Available	1139	Open in IMG/M
3300031562\|Ga0310886_10101093	All Organisms → Viruses → Predicted Viral	1437	Open in IMG/M
3300031854\|Ga0310904_10291255	Not Available	1030	Open in IMG/M
3300031858\|Ga0310892_10279506	Not Available	1043	Open in IMG/M
3300031892\|Ga0310893_10126468	Not Available	969	Open in IMG/M
3300031913\|Ga0310891_10187080	All Organisms → cellular organisms → Archaea	690	Open in IMG/M
3300032002\|Ga0307416_100553858	All Organisms → Viruses → Predicted Viral	1224	Open in IMG/M
3300032002\|Ga0307416_102386149	Not Available	629	Open in IMG/M
3300034149\|Ga0364929_0142580	Not Available	774	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	19.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.65%
Aquatic	Environmental → Aquatic	22.12%
Plants	Host-Associated → Plants	19.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Marine	Environmental → Aquatic → Marine	11.54%
Freshwater	Environmental → Aquatic → Freshwater	5.77%
Sediment	Environmental → Aquatic → Sediment	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	11.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	11.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.08%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	11.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007918	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_2	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009406	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_1 SPAdes	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055471_100070663	3300003987	Natural And Restored Wetlands	MKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC*
Ga0055466_102632991	3300003997	Natural And Restored Wetlands	LANLFKLLSITKNMKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC*
Ga0055472_100376431	3300003998	Natural And Restored Wetlands	MKKALIFLIMTIMMVVVTTTISQTHEVYAENKAKDLCSQYDGEWSNGKCKIKNEEDKTDYEDELCDDAKDTKKYAKICKGNSD*
Ga0055465_100325453	3300004013	Natural And Restored Wetlands	ITKNMKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC*
Ga0062592_1018393661	3300004480	Soil	MKKVLTFLMMTIMMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN*
Ga0075428_1017996471	3300006844	Populus Rhizosphere	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0075430_1000773782	3300006846	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSNQLNN*
Ga0075430_1010963661	3300006846	Populus Rhizosphere	HSNMKKALTFLMMTIMMVAVTTIITQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0075431_1008896471	3300006847	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSN*
Ga0075420_1012619382	3300006853	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0079217_100813832	3300006876	Agricultural Soil	MKKAVTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0079217_106583602	3300006876	Agricultural Soil	MKKALIFLIMTIMMVATTTTISQTQEIYAENKAKNLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKDNSD*
Ga0075429_1010141992	3300006880	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0079215_101100401	3300006894	Agricultural Soil	MQKALTFLMMTIMMVAVTIIISQTHEVYAENKAKDLCSQYDGEWNNDKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0079216_101639242	3300006918	Agricultural Soil	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDNSN*
Ga0075419_103874392	3300006969	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSNQLNN*
Ga0079218_103987774	3300007004	Agricultural Soil	MHKALTFLMITIMMVAVTIIISRTPEVYAENKAKDLCSQYDGEWNNDKCKIKNDEDNTDYEDELCDDPR
Ga0111545_10828841	3300007918	Sediment	LLIIDNNMKKVLTFLMMTIMIVGVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0111539_132337952	3300009094	Populus Rhizosphere	NMKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0075418_102584661	3300009100	Populus Rhizosphere	MKKVLTFLIMTIIMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSN*
Ga0105091_102318811	3300009146	Freshwater Sediment	MKKALIFLIMTIMMVVVTTISQTHEVYAENKAKDLCSQYDGEWSNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKGNSD*
Ga0114129_127148012	3300009147	Populus Rhizosphere	MVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDAKKYPKVCKDNSN*
Ga0105104_100067215	3300009168	Freshwater Sediment	MKEALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDNSD*
Ga0105104_100139902	3300009168	Freshwater Sediment	MKKVLTFLMMTIMIVGVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN*
Ga0105242_120896561	3300009176	Miscanthus Rhizosphere	MIVGLTTTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN*
Ga0116587_10645131	3300009406	Sediment	MKKALTFLMMTIMMVAVTTTISQTHKVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKNN*
Ga0105249_126587071	3300009553	Switchgrass Rhizosphere	MIVGLTTTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSK
Ga0126307_100912902	3300009789	Serpentine Soil	MKKALIFLIMTIMMVAITTTISQTQEIYAENKAKNLCSQYDGEWNNGKCKIKNNDDKTAYEDELCDDAKDTEKYAKICKGNSD*
Ga0126307_101633052	3300009789	Serpentine Soil	MKKALIFLMTTIMMVAITTTLSQTHDVYAQNKAQDLCSQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDTEKYAEICKGNSD*
Ga0126307_105774461	3300009789	Serpentine Soil	MTKALIFLMMTIMMVALTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKLKNDEDKTAYEDELCDDAQDTEKYAKICKGNSD*
Ga0126313_101051313	3300009840	Serpentine Soil	MKKALIFLMMTIMMVTITTTLSQTHEVYAENKAKDLCSQYDGEWNNGKCKLKNNDDKTAYEDELCDDAKDTEKYAKICKGNSD*
Ga0126313_101799913	3300009840	Serpentine Soil	MKKALIFLMMTIMMVALTTTISQTHDVYAENKAKDLCSQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDTEKYAEICKGNSD*
Ga0126305_106999241	3300010036	Serpentine Soil	MTKALIFLMMTIMMVAITTTLSQTHEVYAENKAKDLCTQYDGEWNNGKCKLKNDDDKTAYEDELCDDPKDTEKYAEICKGNSD*
Ga0126304_107215011	3300010037	Serpentine Soil	MKKALIFLMTTIMMVAITTTLSQTHDVYAQNKAQDLCSQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDT
Ga0126304_108596301	3300010037	Serpentine Soil	MKKALIFLMMTIMMVAITTTLSQTHDVYAENKAKDLCTQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDTEKYAEICKGNSD*
Ga0126315_108360671	3300010038	Serpentine Soil	DNVMKKAIFLIMMTIMMVTVTTTLSSQTHKVYAENKAKELCSEYDGEWNNGKCKIKDDKDETDFEDELCNNKKDAKKYEEICKSG*
Ga0126309_105329152	3300010039	Serpentine Soil	MKKALTFLMMTIMMVAVTTIISQTNEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYSKICKDNSN*
Ga0126312_104288322	3300010041	Serpentine Soil	MKKALIFLMMTIMMVALTTTISQTHDVYAENKAKDLCSQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDTEKYAEIC
Ga0126312_107658432	3300010041	Serpentine Soil	MKKALIFLMMTIMMVAITTTLSQTHDVYAENKAKDLCTQYDGEWNNGKCKLKNNDDKTDYEDELCDDPKDTE
Ga0126311_107036821	3300010045	Serpentine Soil	MTKALIFLMMTIMMVALTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKLKNDEDKTAYEDELCDDAKDTEKYAKICKGNSD*
Ga0126306_100296656	3300010166	Serpentine Soil	MKKALIFLMTTIMMVAITTTLSQTHDVYAQSKAQDLCSQYDGEWNNGKCKLKNNDDKTDYEDELCDD
Ga0157307_10375831	3300013096	Soil	MKTVLTFLMMTIMMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN*
Ga0075311_10823092	3300014259	Natural And Restored Wetlands	MKKVLTFLMMTIMMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKGNSD*
Ga0075314_11512171	3300014265	Natural And Restored Wetlands	MKKGLIFLMMTIMMVAITTTISQIYEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKGNSD*
Ga0075322_10007146	3300014311	Natural And Restored Wetlands	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYSKICKDNSN*
Ga0132258_136559001	3300015371	Arabidopsis Rhizosphere	MIIGVTPTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKCEEDKTDYEDELWNDPKDTKKYPKISKDN*
Ga0132256_1014488612	3300015372	Arabidopsis Rhizosphere	MIIGVTPTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN*
Ga0132257_1024962881	3300015373	Arabidopsis Rhizosphere	MMVAITTTISQTHIVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYTKICKDNSN*
Ga0184624_100179682	3300018073	Groundwater Sediment	MKKALTFLMITIMMVAVTTIISQTHIVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDSKDTKKYPKICKDNSD
Ga0184625_106692441	3300018081	Groundwater Sediment	MLLIIDTNMKKALTFLIMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0184639_103494791	3300018082	Groundwater Sediment	ALTFLMMTIMMVAVTTIISQTHIVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0190275_100428627	3300018432	Soil	MKKALTFLMMTVMMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190269_107443161	3300018465	Soil	MKKALTFLMMTIMMVAVTTIISQTHIVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSD
Ga0190268_101335783	3300018466	Soil	MTIMMVGVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190268_103823052	3300018466	Soil	MKKALTFLMMTIMMVAVTTIISQTHEVYAENNAKDLCSQYDGEWNNDKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190270_105421161	3300018469	Soil	MKKALIFLIMTIMMVAINTTISQTQEIYAENKAKNLCSQYDGEWNNGKCKIKNEDDKTDYEDELCDDAKDTKKYAKICKGNSD
Ga0190270_108130201	3300018469	Soil	MTILMVGVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190270_109301772	3300018469	Soil	MTIMMVAVTTIISQTHEVYAENKAKDLCTQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDT
Ga0190270_111976831	3300018469	Soil	NMKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0190270_131947361	3300018469	Soil	MMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDN
Ga0190270_132700272	3300018469	Soil	MKKALTFLMITIMMVAVTTIISQTHKVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKFPKICKDNSD
Ga0190274_101025312	3300018476	Soil	MKKTLTLLMITIMMVGVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190271_100382354	3300018481	Soil	MKKALTFLMMTIMMVAVTTTISQTHKVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0190271_103945743	3300018481	Soil	MKKALTFLMMTVMMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKAILTN
Ga0190273_101412082	3300018920	Soil	MKKALTFLMMTIMLVAVTTIITQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0173481_101155182	3300019356	Soil	MTIMMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0190267_102150712	3300019767	Soil	MTIMMVAITTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDDLCDDPKDTKKYPKICKDN
Ga0193741_10054954	3300019884	Soil	MKKALTFLMMTIMMVAVTIIISQTHEVYAENKAKDLCSQYDGEWNNDKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0193741_10544203	3300019884	Soil	QTHEVYAENKAKDLCSQYDGEWNNGKCKIENDEDKTDYEDELCDDAKDTKKYPKICKDNS
Ga0193737_10642872	3300021972	Soil	MKKALTFLMMTIMMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCNIKNEDDKTDYEDELCD
Ga0209108_101511111	3300025165	Soil	MKKALIFLMMTIMMVAITTTISQTHEVYAENKAKDLCSQYDGEWSNGKCKIKNEEDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0210061_10195422	3300025537	Natural And Restored Wetlands	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYSKICKDNSN
Ga0210061_10965011	3300025537	Natural And Restored Wetlands	LANLFKLLSITKNMKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC
Ga0210087_10179793	3300025559	Natural And Restored Wetlands	NFLIVLIIDNHMKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDDLCDDPKDTKKYPKICKDN
Ga0210076_10080461	3300025567	Natural And Restored Wetlands	ITKNMKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC
Ga0210115_10214872	3300025791	Natural And Restored Wetlands	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYAKICKGNSD
Ga0210143_10014804	3300025792	Natural And Restored Wetlands	MMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKYSKICKDNSN
Ga0210114_10059501	3300025795	Natural And Restored Wetlands	MKKALTFLMLTLMMVAINTTLAQTHKVYAENKAKDLCAQYDGEWNNGKCKLENDKDEADYEDELCDNAKDKEKYSEIC
Ga0210114_10926031	3300025795	Natural And Restored Wetlands	MKKALIFLIMTIMMVVVTTTISQTHEVYAENKAKDLCSQYDGEWSNGKCKIKNEEDKTDYEDELCDDAKDTKKYAKICKGNSD
Ga0207704_112719441	3300025938	Miscanthus Rhizosphere	MIIGVTPTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN
Ga0207648_111835551	3300026089	Miscanthus Rhizosphere	MIVGLTTTISQTHEVYAENKAKDLCSHYDDEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN
Ga0256867_100455083	3300026535	Soil	VKQALIFLMMTIMMVAVTTTISQSHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDPRKYAKICKGNSD
Ga0214467_10126952	3300027075	Soil	VKQALIFLMMTIMMVAVTTTISQSHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDDLCDDPKDTKKYPKICKDN
Ga0214469_10335903	3300027636	Soil	MMVAVTTTISQSHEVYAENKAKDLCSQYDGEWNNGKCKIKIDEDKTDYEDELCDDAKDTKKI
Ga0209818_11800791	3300027637	Agricultural Soil	MVALTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0256866_10156352	3300027650	Soil	VKQALIFLMMTIMMVAVTTTISQSHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTRKYAKICKGNSD
Ga0209593_100322854	3300027743	Freshwater Sediment	MTIMIVGVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0209593_100325243	3300027743	Freshwater Sediment	MKKVLTFLMVTIMIVGLTTTISQTHEVYAENKAKDLCSHYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSEISKNM
Ga0209593_102080291	3300027743	Freshwater Sediment	MKEALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYLKICKDN
Ga0207428_101528891	3300027907	Populus Rhizosphere	MTIIMVAVTTTISQTHQVYAENKAKDLCSQYDGEWNNGKCKIKNDDDKTDYEDELCDDAKDTKKYPKICKDNSN
Ga0272482_101787381	3300028578	Soil	MKKALTFLMMTIMMVVVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDHKDTKKYPKICKDN
Ga0299907_104177161	3300030006	Soil	VKQALIFLMMTIMMVAVTTTISQSHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDTKKICKGNSD
Ga0299906_110190342	3300030606	Soil	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKSDYEDELCDDAKDTKKYAKTCKGNSD
Ga0299914_101643901	3300031228	Soil	VKQALIFLMMTIMMVAVTTTISQSHELYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKDPRKYAKICKGNSD
Ga0310887_101158213	3300031547	Soil	MKKALTFLMMTIRMVTVTTTISQTHIVYAENKAKDLCSQYDGEWNNGKCKIKCEEDKTDYEDELWNDPKDTKKYPKICKDN
Ga0310887_101778503	3300031547	Soil	MKKALTFLIMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN
Ga0310886_101010933	3300031562	Soil	MKKALTFLIMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDHKDTKKYPKICKDN
Ga0310904_102912551	3300031854	Soil	MKKALTFLIMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYPKICKDN
Ga0310892_102795061	3300031858	Soil	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDHKDTKKYPKICKDN
Ga0310893_101264682	3300031892	Soil	MKKALTFLIMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKCEEDKTDYEDELWNDPKDTKKYPKICKDN
Ga0310891_101870801	3300031913	Soil	LMMTIMMVAVTTIITQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDKLCDDPKDSKKYPKICKDN
Ga0307416_1005538583	3300032002	Rhizosphere	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYSKICKDNSN
Ga0307416_1023861492	3300032002	Rhizosphere	VMTIMMVAVTTTISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDPKDTKKYSKICKGNSD
Ga0364929_0142580_563_772	3300034149	Sediment	MKKALTFLMMTIMMVAVTTIISQTHEVYAENKAKDLCSQYDGEWNNGKCKIKNDEDKTDYEDELCDDAKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096823

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences