Metagenome / Metatranscriptome Family F096808

Basic Information
Family ID	F096808
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	72 residues
Representative Sequence	GNTISPKIIRGMTIEDIPHLQDLKPLKSFEIPPGDSIPFTIVFLKSAKNAKEFSCEVITAEGEI
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.385 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102. 1ICCgaii200_05686341 2AP72_2010_repI_A01DRAFT_10536332 3JGI1027J11758_121768953 4AP72_2010_repI_A100DRAFT_10137463 5Ga0055471_100941431 6Ga0055471_101786171 7Ga0055496_100275671 8Ga0055487_100371113 9Ga0063356_1022390323 10Ga0063356_1034815551 11Ga0066676_107900781 12Ga0065705_110043051 13Ga0065705_111155752 14Ga0066388_1035473943 15Ga0070661_1006088211 16Ga0070675_1017756502 17Ga0066689_107994811 18Ga0070704_1010405201 19Ga0070664_1010756951 20Ga0066703_103464773 21Ga0066706_112142883 22Ga0070702_1015866272 23Ga0075293_10310741 24Ga0075285_10038311 25Ga0066656_102339731 26Ga0075430_1003130691 27Ga0075431_1003446204 28Ga0075433_101451731 29Ga0075425_1006222283 30Ga0075425_1025451672 31Ga0073934_106331923 32Ga0075429_1015511342 33Ga0075426_103310944 34Ga0075419_103523411 35Ga0075419_103544211 36Ga0075419_108702281 37Ga0079218_123162443 38Ga0075435_1009454813 39Ga0105104_105002401 40Ga0126382_101277791 41Ga0126382_102882343 42Ga0126379_130523181 43Ga0134124_123970763 44Ga0134123_102446471 45Ga0105246_118424101 46Ga0137462_10557543 47Ga0137423_10206731 48Ga0137443_12102362 49Ga0137451_11761661 50Ga0137389_114340372 51Ga0137334_11302131 52Ga0137334_11625571 53Ga0137378_103264871 54Ga0150984_1177297592 55Ga0157353_10088523 56Ga0157342_10660362 57Ga0137373_111099842 58Ga0137358_107314853 59Ga0126375_120523941 60Ga0134076_100552191 61Ga0075340_10109533 62Ga0180086_10727303 63Ga0120193_100542932 64Ga0137418_105982813 65Ga0180075_10518481 66Ga0187825_100900441 67Ga0187822_102745511 68Ga0184604_100337013 69Ga0184605_100747644 70Ga0187788_100114621 71Ga0184637_104826583 72Ga0190272_103479091 73Ga0190272_109238993 74Ga0190272_130243261 75Ga0190270_106281131 76Ga0190271_101195301 77Ga0180115_10541871 78Ga0193723_11968682 79Ga0193712_10710722 80Ga0193713_11666402 81Ga0193726_13129931 82Ga0210379_100297861 83Ga0193699_104213342 84Ga0193699_104219672 85Ga0193709_11053252 86Ga0209108_104944793 87Ga0207685_105962311 88Ga0207684_113126892 89Ga0207649_106946193 90Ga0207646_110062921 91Ga0207659_113225301 92Ga0207659_115340761 93Ga0208285_10092363 94Ga0208420_10022704 95Ga0208535_10183991 96Ga0208780_10099373 97Ga0210000_10597651 98Ga0209593_101690681 99Ga0209974_100254224 100Ga0209705_102703053 101Ga0299913_114224501 102Ga0306926_115114281 103Ga0364930_0232249_393_623 104Ga0364933_156576_3_218
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102. 1ICCgaii200_05686341 2AP72_2010_repI_A01DRAFT_10536332 3JGI1027J11758_121768953 4Ga0055471_100941431 5Ga0055496_100275671 6Ga0065705_110043051 7Ga0065705_111155752 8Ga0070661_1006088211 9Ga0066689_107994811 10Ga0070664_1010756951 11Ga0070702_1015866272 12Ga0075285_10038311 13Ga0073934_106331923 14Ga0075435_1009454813 15Ga0126382_102882343 16Ga0137423_10206731 17Ga0137443_12102362 18Ga0137451_11761661 19Ga0150984_1177297592 20Ga0134076_100552191 21Ga0180075_10518481 22Ga0187822_102745511 23Ga0184637_104826583 24Ga0190272_109238993 25Ga0193712_10710722 26Ga0210379_100297861 27Ga0193699_104219672 28Ga0208780_10099373 29Ga0364930_0232249_393_623
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0208535_10183991 2ICCgaii200_05686341 3JGI1027J11758_121768953 4AP72_2010_repI_A100DRAFT_10137463 5Ga0055471_100941431 6Ga0055471_101786171 7Ga0055487_100371113 8Ga0063356_1022390323 9Ga0065705_110043051 10Ga0070664_1010756951 11Ga0066703_103464773 12Ga0066706_112142883 13Ga0075425_1025451672 14Ga0073934_106331923 15Ga0126382_102882343 16Ga0126379_130523181 17Ga0134124_123970763 18Ga0137423_10206731 19Ga0137451_11761661 20Ga0137334_11625571 21Ga0137378_103264871 22Ga0150984_1177297592 23Ga0157353_10088523 24Ga0134076_100552191 25Ga0180086_10727303 26Ga0187825_100900441 27Ga0184605_100747644 28Ga0187788_100114621 29Ga0184637_104826583 30Ga0190272_109238993 31Ga0193699_104219672 32Ga0207649_106946193 33Ga0209593_101690681 34Ga0364930_0232249_393_623 35Ga0364933_156576_3_218
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.61% β-sheet: 0.00% Coil/Unstructured: 92.39%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02416	TatA_B_E	86.54
PF03544	TonB_C	11.54
PF00266	Aminotran_5	0.96
PF02347	GDC-P	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	86.54
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	11.54
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	0.96
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.96

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.65 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	83.65 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	83.65 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	0.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	73.08 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.08 %
Unclassified	root	N/A	0.96 %

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0568634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1053633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300000789\|JGI1027J11758_12176895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1013746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1141	Open in IMG/M
3300003987\|Ga0055471_10094143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300003987\|Ga0055471_10178617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300004057\|Ga0055496_10027567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1099	Open in IMG/M
3300004061\|Ga0055487_10037111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	746	Open in IMG/M
3300004463\|Ga0063356_102239032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300004463\|Ga0063356_103481555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.92%
Host-Associated	Host-Associated	23.08%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	22.12%
Plants	Host-Associated → Plants	23.08%
Terrestrial	Environmental → Terrestrial	54.81%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	1.92%
Freshwater	Environmental → Aquatic → Freshwater	6.73%
Marine	Environmental → Aquatic → Marine	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.27%
Sediment	Environmental → Aquatic → Sediment	10.58%
Soil	Environmental → Terrestrial → Soil	52.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.92%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.96%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.92%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.58%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.88%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.54%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05686341	2228664021	Soil	LERQTIWVGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSIPFTVVFLKSAKTAREFSCEVLMAEGVI
AP72_2010_repI_A01DRAFT_10536332	3300000579	Forest Soil	VIREVRLAGRLYNQEGREIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKSFEIPPGDSVSFTIVFLKPTKAAKDFGCEILSAEGEA*
JGI1027J11758_121768953	3300000789	Soil	IGNAISPRIIRGMTVQDISDLQRLKPLKSFEMPPGDSIPFTIVFLKSTKGITDFSCAVLAAEDQA*
AP72_2010_repI_A100DRAFT_10137463	3300000837	Forest Soil	AGRLYNQEGREIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKSFEIPPGDSVSFTIVFLKPTKAAKDFGCEILSAEGEA*
Ga0055471_100941431	3300003987	Natural And Restored Wetlands	RLFDLAGKEVERQTMWIGNAISLQIIRGMTAQDVTDLQRLKPLKTFEIPPGDSVPFTIVFLRAGKALKDARCEVLSVEGV*
Ga0055471_101786171	3300003987	Natural And Restored Wetlands	GNTMSPKIIRGMTLEDIPHLQNLKPLRSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI*
Ga0055496_100275671	3300004057	Natural And Restored Wetlands	WIGNTISPKIIRGMTAEDIPHLQELKPLKSFGLPPGDSLPFTVVFLRSAKQANEFSLEVVLAGGEV*
Ga0055487_100371113	3300004061	Natural And Restored Wetlands	IGNTISPKIIRGMTAEDIPHLQELKPLKSFGLPPGDSLPFTVVFLRSAKQANEFSLEVVLAGGEV*
Ga0063356_1022390323	3300004463	Arabidopsis Thaliana Rhizosphere	LERQTIWVGNTISPKIIRGMTLEDIPHLQNLKPLKSFEIPPGDSISFTIVFLKSAKSAKEFSYDVLSADGAT*
Ga0063356_1034815551	3300004463	Arabidopsis Thaliana Rhizosphere	QTIWVGNTMSPKIIRGMTLEDIPHLQNLKPLKSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI*
Ga0066676_107900781	3300005186	Soil	QTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVMNAQGEI*
Ga0065705_110043051	3300005294	Switchgrass Rhizosphere	LTGKVFNEAGTELEQQSTWVGNTLSAKILRGMTVEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKDVTCEVVLADSEI*
Ga0065705_111155752	3300005294	Switchgrass Rhizosphere	YNLEGKEIEQQTIWIGNAISPRIIRGMTLQDISDLQRLKPLKTFEIPPGDSIPFTIVFLKSTKETKDFSCEVLGAEGEA*
Ga0066388_1035473943	3300005332	Tropical Forest Soil	LYNQEGREIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKSFEIPPGDSVSFTIVFLKPTKAAKDFGCEILSAEGEA*
Ga0070661_1006088211	3300005344	Corn Rhizosphere	TLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVTTAGEA*
Ga0070675_1017756502	3300005354	Miscanthus Rhizosphere	RQAIWAGNTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVTTAGEA*
Ga0066689_107994811	3300005447	Soil	LSPKIIRGMTTEDIPHLQSLKPLKSFEIPSGDSVPFTIVFLKSAKNAQDFTCEVVMAEGEV*
Ga0070704_1010405201	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EQQTIWVGNTLSAKILRGMTVEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKDVTCEVVLADSEV*
Ga0070664_1010756951	3300005564	Corn Rhizosphere	KIVRGMTAQDISDLQRLKPLKSFEIPPGDSVPFTIVFLKASKEAKDFTCQIVSAEAEA*
Ga0066703_103464773	3300005568	Soil	ERQTIWVGNTLSPKILRGMTLEDIPQLQDLKPLKNFEIPPGDSIPFTIVFLKSAKSAKEFTCAVSTATGES*
Ga0066706_112142883	3300005598	Soil	QTIWVGNTISPKIIRGMTLEDIPQLQELKPLKSFEIPPGDSIPFTIVFLKSAKGAKAFTCEVAITEGDS*
Ga0070702_1015866272	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DGKEVEHQTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVNAQGEI*
Ga0075293_10310741	3300005875	Rice Paddy Soil	GKEIEKQTIWVGNTMSPKIIRGMTLEDIPHLQNLKPLRSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI*
Ga0075285_10038311	3300005890	Rice Paddy Soil	PKIIRGMTLEDIPHLQNLKPLRSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI*
Ga0066656_102339731	3300006034	Soil	GKELERQTIWVGNSLSAKIIRGMTTEDIPHLQSLKPLKSFEIPSGDSVPFTIVFLKSAKNAQDFTCEVVMAEGEV*
Ga0075430_1003130691	3300006846	Populus Rhizosphere	VVREIQLSAVAYNADGKELERQTIWVGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSIPFTVVFLKSAKTAREFSCEVLMAEGVI*
Ga0075431_1003446204	3300006847	Populus Rhizosphere	LSAKILRGMTVEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKDVTCEVVLADSEV*
Ga0075433_101451731	3300006852	Populus Rhizosphere	EIERQTIWAGNTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFICEVSTAGEA*
Ga0075425_1006222283	3300006854	Populus Rhizosphere	WVGNTMSPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFTIVFLKSTKNANEFTCEVVNAQGEI*
Ga0075425_1025451672	3300006854	Populus Rhizosphere	KVYNRDGKEIEHQTIWVGNTLSPKILRGMTAEDIPQLQELKPLKSFEIPPGDSIPFTIVFLRSAKSASEFSCEVINAQGEA*
Ga0073934_106331923	3300006865	Hot Spring Sediment	DEQAIWIGNAISPKIIRGMTPQDIADLQRLKPLRTFDIPPGDSVPFTIVFVKAPKGVKDFACEVLSAEAQT*
Ga0075429_1015511342	3300006880	Populus Rhizosphere	VQLTGKVFNEAGTELEQQSIWVGNTLSAKILRGMTVEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKHVTCEVVLADSEV*
Ga0075426_103310944	3300006903	Populus Rhizosphere	NTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVSTAGEA*
Ga0075419_103523411	3300006969	Populus Rhizosphere	EHQTIWVGNTMSPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVDAQGEI*
Ga0075419_103544211	3300006969	Populus Rhizosphere	NTISPKIIRGMTTEDIPHLQNLKPLKSFEIPSGDSVPFTIVFLKLTKNARDFTCEVVTAEGEV*
Ga0075419_108702281	3300006969	Populus Rhizosphere	WVGNTLSAKILRGMTVEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKDVTCEVVLADSEV*
Ga0079218_123162443	3300007004	Agricultural Soil	RQTIWVGNTISPKIIRGMTPEDIPHLQNLKPLKSFEIPSGDSMPFTIVFLKSTKNAQDFTCAVVAAEGEV*
Ga0075435_1009454813	3300007076	Populus Rhizosphere	NTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANELPARS*
Ga0105104_105002401	3300009168	Freshwater Sediment	IIRGMTVQDISDLQRLKPLKTFEIPPGDSIPFTIVFLKSTKGIINFSCEVLAAEGEA*
Ga0126382_101277791	3300010047	Tropical Forest Soil	EIEQQTIWIGNAISPRIIRGMTLQDVSDLQRLKPLKTFEIPPGDSIPFTIVFLKSTKETKDFSCEVLGAEGEA*
Ga0126382_102882343	3300010047	Tropical Forest Soil	ESQTIWAGNSMSSKILRGMTTEDIPHLQNLKPLKTFEVPPGDSVPFTIVFLKSVKATKDFSCEVVMAQGEV*
Ga0126379_130523181	3300010366	Tropical Forest Soil	EIEQQTIWIGNAISPRIIRGMTLQDVSDLQRLKPLKTFEIPPGDSIPFTIVFLKSTKETKDFSCEVLGAEEEA*
Ga0134124_123970763	3300010397	Terrestrial Soil	QTIWVGNTISPKIIRGMTLEDIPHLQNLKPLKSFEIPPGDSIPFTIVFLKSAKFAREFSCDVLTAQGVT*
Ga0134123_102446471	3300010403	Terrestrial Soil	QTIWLGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV*
Ga0105246_118424101	3300011119	Miscanthus Rhizosphere	PKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV*
Ga0137462_10557543	3300011421	Soil	TISPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGEV*
Ga0137423_10206731	3300011430	Soil	IERQTMWIGNAISSQIVRGMTTQDVSDLQRLKPLKTFEIPSGDSVPFAIVFLRIGKQVKDARCAVLSAEGDA*
Ga0137443_12102362	3300011433	Soil	VTGKVFNLEGKELEKQTIWIGNTISPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGEV*
Ga0137451_11761661	3300011438	Soil	NEAGKEMEQQTIWIGNTLSAKILRGMTLEEIPNLQSLKPLKSFEMPPGDSIPFTVVFLKSAKSAKDFTCEVALAQGEV*
Ga0137389_114340372	3300012096	Vadose Zone Soil	IVTGTALNQNPIVIREVRVAGQLYNQEGKEIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKTFEIPPGDSVSFTIVFLKATKAAKVFRCEILSAEGEA*
Ga0137334_11302131	3300012179	Soil	RQTMWIGNAISSQIIRGMSAQDITDLQRLKPLKTFEIPSGDSVPFAIVFLRTGKPVKDARCEVLSAEGDA*
Ga0137334_11625571	3300012179	Soil	EGKELEKQTIWIGNTISPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGEV*
Ga0137378_103264871	3300012210	Vadose Zone Soil	GGKELERQTIWVGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPSGDSVPFTIVFLKSTKNAQDFTCEVVMAEGEV*
Ga0150984_1177297592	3300012469	Avena Fatua Rhizosphere	IGNAISPKIIRGMTAQDIADLQRLKPLKSFDIPPGDSVPFTMVFVKSPKGIKEFTCQILTAEEDI*
Ga0157353_10088523	3300012496	Unplanted Soil	KIYNRDGKEVEHQTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVKAQGEI*
Ga0157342_10660362	3300012507	Arabidopsis Rhizosphere	KEVEHQTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVNAQGEI*
Ga0137373_111099842	3300012532	Vadose Zone Soil	QGGKELERQTIWVGNSLSPKIIRGMTTEDIPHLQNLKPLKSFEVPSGDSVPFTIVFLQSTKSAQDFTCEVVMAEGEV*
Ga0137358_107314853	3300012582	Vadose Zone Soil	MSPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFTIVFLKSTKNANEFTCEVVNAQGEI*
Ga0126375_120523941	3300012948	Tropical Forest Soil	ISPRIIRGMTLQDVSDLQRLKPLKTFEIPPGDSIPFTIVFVKSTKETKDFSCEVLGAEGEA*
Ga0134076_100552191	3300012976	Grasslands Soil	IGNTISAKIIHGMTAQDISDLQRLPPLKTFDIPPGDSVPFTIVFLKSARGIKDFRCAVIAAEGEVA*
Ga0075340_10109533	3300014304	Natural And Restored Wetlands	FNTEGKMIERQTIWIGNTISPKIIRGMTAEDIPHLQELKPLKSFGLPPGDSIPFTVVFLRPAKQAKEFSLEVVLADGEV*
Ga0180086_10727303	3300014883	Soil	EGREIERQTMWIGNAISSQIIRGMSAQDITDLQRLKPLKTFKIPSGDSVPFAIVFLRTGKPVKDARCEVLSAEGDA*
Ga0120193_100542932	3300014965	Terrestrial	DRQTIWVGNSISPKIIRGMTTEDIPHLQNLKPLKSFEIPSGDSVPFTIVFLRSTKNAQDFTCEVVTAEGEV*
Ga0137418_105982813	3300015241	Vadose Zone Soil	GNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVMNAQGEI*
Ga0180075_10518481	3300015252	Soil	LSPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGAV*
Ga0187825_100900441	3300017930	Freshwater Sediment	TIWLGNTISPKIIRGMTSEDIPPLQNLKPLRSFKIPPGDSIPFTIVFMKSVKSAKEFSCEVLAAEG
Ga0187822_102745511	3300017994	Freshwater Sediment	LGNTISPKIIRGMTSEDIPPLQSLKPLRSFEIPPGDSIPFTIVFMKSVKSAKEFSCEVLAAEG
Ga0184604_100337013	3300018000	Groundwater Sediment	QTIWVGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPSGDSIPFTIAFLKSTKNAKDFTCEVMAAEGEA
Ga0184605_100747644	3300018027	Groundwater Sediment	SPKIIRGMTTEDIPHLQNLKPLKSFEIPSGDSIPFTIAFLKSTKNAKDFTCEIMAAEGEA
Ga0187788_100114621	3300018032	Tropical Peatland	LEHQTIWIGNTMSTKIIRGMTPEDIPHLQNLKPLKSFEMPPGDSVNFAIVFLKAAKSAKEFSCEVALAGGEI
Ga0184637_104826583	3300018063	Groundwater Sediment	PVVIREIQLTGIVHNDGGKELEQQTIWVGNTLSAKILRGMTLEDIPHLQSLKPLKSFEIPPGDSVPFAMVFLKATRGVKDFSCAVSFADSDA
Ga0190272_103479091	3300018429	Soil	TISPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIPFTMVFLKPPKQVKDFSLEVVLADGAI
Ga0190272_109238993	3300018429	Soil	GNTISPKIIRGMTSEDIPHLQNLRPLRSFEIPPGDSVPFTIVFLKATRDAKDFTCEVVAAAAEV
Ga0190272_130243261	3300018429	Soil	IREVQLTGKVFNEAGTELEQQSIWVGNTLSAKILRGMTAEDIPHLQNLKPLKSFELPPGDSIPFAIVFLKSTKSAKDVTCEVVLADSEV
Ga0190270_106281131	3300018469	Soil	ISPKIIRGMTVEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGA
Ga0190271_101195301	3300018481	Soil	IREVKVTGKVFNLEGKELEKQTIWIGNTISPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIPFTMVFLKPAKQVKDFSLEVVLADGEI
Ga0180115_10541871	3300019257	Groundwater Sediment	NTLSPKIIRGMTAEDIPHLQDLKPLKSFELPPGDSIAFTMVFLKPAKQVKDFSLEVVLADGEV
Ga0193723_11968682	3300019879	Soil	GKEIEHQTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVNAQGEI
Ga0193712_10710722	3300019880	Soil	VFNDTGRELEQQTIWLGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV
Ga0193713_11666402	3300019882	Soil	TQMVWCKIYNRDGKEIEHQTIWVGNTISPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVNAQGEI
Ga0193726_13129931	3300020021	Soil	GNTISPKIIRGMTIEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV
Ga0210379_100297861	3300021081	Groundwater Sediment	AKILRGMTPEDIPHLQSLKPLKSFEMPPGDSMPFAMVFLKASKGVKDFNCAVTFADSES
Ga0193699_104213342	3300021363	Soil	RELEQQTIWLGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV
Ga0193699_104219672	3300021363	Soil	WLGNTLSAKIIRDMTTEDIPHLQSLKPLKSFEMPPGDSIPFAIVFLKSTKAANNFTCEVSLAEDAA
Ga0193709_11053252	3300021411	Soil	TGRELEQQTIWLGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSVPFTIVFLRSAKAAKDFTCQVITAAAEV
Ga0209108_104944793	3300025165	Soil	GKELEKQMIWVGNTISPKIIRGMTIEDIPHLQDLKPLKSFEIPPGDSIPFTIVFLKSAKTAKEFSCEVITAEGEI
Ga0207685_105962311	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	IERQAIWAGNTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVTTAGEA
Ga0207684_113126892	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NQEGKEIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKTFEIPPGDSVSFTIVFLKATKAAKDFRCEILSAEGEA
Ga0207649_106946193	3300025920	Corn Rhizosphere	WAGNTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVTTAGEA
Ga0207646_110062921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LNQNPIVIREVRVAGQLYNQEGKEIEQQTIWIGNAISPKIVRGMTAQDISDLQRLKPLKTFEIPPGDSVSFTIVFLKATKAAKDFRCEILSAEGEA
Ga0207659_113225301	3300025926	Miscanthus Rhizosphere	SPKIIRGMTVEDIPQLQELKPLKSFEVPPGDSIPFAIVFLKSTKNANEFTCEVVNAQGEI
Ga0207659_115340761	3300025926	Miscanthus Rhizosphere	RQAIWAGNTLSPKIIRGMTLEDIPQLQELKPLKSFELPPGDSIPFTIVFLKSSKNAKEFTCEVTTAGEA
Ga0208285_10092363	3300026005	Rice Paddy Soil	AYNHDGKEIEKQTIWVGNTMSPKIIRGMTLEDIPHLQNLKPLRSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI
Ga0208420_10022704	3300026028	Natural And Restored Wetlands	LEKQMIWVGNTISPKIIRGMTIEDIPHLQDLKPLKSFEIPPGDSIPFTIVFLKSAKNAKEFSCEVITAEGEI
Ga0208535_10183991	3300026045	Natural And Restored Wetlands	GNTISPKIIRGMTIEDIPHLQDLKPLKSFEIPPGDSIPFTIVFLKSAKNAKEFSCEVITAEGEI
Ga0208780_10099373	3300026046	Natural And Restored Wetlands	LSAISYNGEGKELEKQMIWVGNTISPKIIRGMTIEDIPHLQDLKPLKSFEIPPGDSIPFTIVFLKSAKNAKEFSCEVITAEGEI
Ga0210000_10597651	3300027462	Arabidopsis Thaliana Rhizosphere	KIIRGMTLEDIPHLQNLKPLKSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGAI
Ga0209593_101690681	3300027743	Freshwater Sediment	SIWIGNAISPRIIRGMTVQDISDLQRLKPLKTFEIPPGDSIPFTIVFLKSTKGIINFSCEVLAAEGEA
Ga0209974_100254224	3300027876	Arabidopsis Thaliana Rhizosphere	WVGNTISAKIIRGMTLEDIPHLQNLKPLKSFEIPPGDSIPFTIVFLKSAKTAREFSCAVLMADGPI
Ga0209705_102703053	3300027979	Freshwater Sediment	TGKIFNTEGKMIERQTIWVGNTISPKIIRGMTAEDIPHLQELKPLKSFGLPPGDSIHFTVVFLRPAKQAKEFSLEVVLADGEV
Ga0299913_114224501	3300031229	Soil	VGNTISPKIIRGMTTEDIPHLQNLKPLKSFEIPPGDSIPFTIVFLKSAKSAREFTCEVLVAEGAI
Ga0306926_115114281	3300031954	Soil	IAGQLYNLEGKEIEQQTIWIGNAISPRIIRGMTVQDISDLQRLKPLKNFEMPPGDTIPFTIVFLKSTKGITDFSCAVLAAEDQA
Ga0364930_0232249_393_623	3300033814	Sediment	GGKEVEAQTIWVGNTLSAKILRGMTLEDIPHLQSLKPLKSFEMPPGDSMPFAMVFLKASKGVNDFSCAATFADSEN
Ga0364933_156576_3_218	3300034150	Sediment	EQQTIWLGNTISPKIIPGMTSEDIPHLQNLKPLKSFEIPPGDSVPFTSVFLRSAKAAKDFTCQVITAAAEV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096808

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences