Metagenome / Metatranscriptome Family F096755

Basic Information
Family ID	F096755
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	70 residues
Representative Sequence	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (64.423 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.615 % of family members)
Environment Ontology (ENVO)	Unclassified (40.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.231 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.52% β-sheet: 36.36% Coil/Unstructured: 62.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00571	CBS	2.88
PF13442	Cytochrome_CBB3	1.92
PF00211	Guanylate_cyc	1.92
PF00589	Phage_integrase	1.92
PF07885	Ion_trans_2	1.92
PF13408	Zn_ribbon_recom	0.96
PF00248	Aldo_ket_red	0.96
PF10002	DUF2243	0.96
PF13668	Ferritin_2	0.96
PF01027	Bax1-I	0.96
PF00795	CN_hydrolase	0.96
PF13302	Acetyltransf_3	0.96
PF14698	ASL_C2	0.96
PF10851	DUF2652	0.96
PF07366	SnoaL	0.96
PF03098	An_peroxidase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
All Organisms	root	All Organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
cellular organisms	root	All Organisms → cellular organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.88 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.96 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.88 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.88 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.96 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.96 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.88 %
Conexibacter arvalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter arvalis	0.96 %
Nocardioides speluncae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	0.96 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005329\|Ga0070683_100042693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter arvalis	4176	Open in IMG/M
3300005347\|Ga0070668_101312919	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005366\|Ga0070659_100468559	Not Available	1071	Open in IMG/M
3300005438\|Ga0070701_10258468	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005441\|Ga0070700_100487122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300005459\|Ga0068867_100082119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2430	Open in IMG/M
3300005577\|Ga0068857_100806629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300005719\|Ga0068861_100235801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1554	Open in IMG/M
3300005840\|Ga0068870_10510584	Not Available	803	Open in IMG/M
3300005843\|Ga0068860_101356761	Not Available	732	Open in IMG/M
3300005844\|Ga0068862_101927816	Not Available	601	Open in IMG/M
3300006881\|Ga0068865_101246503	Not Available	659	Open in IMG/M
3300006881\|Ga0068865_101733292	Not Available	563	Open in IMG/M
3300009093\|Ga0105240_11966651	Not Available	608	Open in IMG/M
3300009148\|Ga0105243_11134084	Not Available	792	Open in IMG/M
3300009174\|Ga0105241_12120970	Not Available	556	Open in IMG/M
3300009176\|Ga0105242_11483917	Not Available	708	Open in IMG/M
3300009177\|Ga0105248_11159251	Not Available	874	Open in IMG/M
3300010040\|Ga0126308_10105109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1736	Open in IMG/M
3300010041\|Ga0126312_10162932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1551	Open in IMG/M
3300010045\|Ga0126311_11227745	Not Available	621	Open in IMG/M
3300010371\|Ga0134125_10616827	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300010375\|Ga0105239_11248352	Not Available	857	Open in IMG/M
3300010399\|Ga0134127_10765489	Not Available	1011	Open in IMG/M
3300010400\|Ga0134122_11124112	Not Available	780	Open in IMG/M
3300010403\|Ga0134123_12624673	Not Available	571	Open in IMG/M
3300010999\|Ga0138505_100027737	Not Available	758	Open in IMG/M
3300011000\|Ga0138513_100015820	Not Available	998	Open in IMG/M
3300011119\|Ga0105246_10162644	Not Available	1702	Open in IMG/M
3300012204\|Ga0137374_10171499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1907	Open in IMG/M
3300012883\|Ga0157281_1032364	Not Available	727	Open in IMG/M
3300012893\|Ga0157284_10023660	Not Available	1220	Open in IMG/M
3300012899\|Ga0157299_10031199	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300012903\|Ga0157289_10133766	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300012911\|Ga0157301_10173440	Not Available	705	Open in IMG/M
3300012914\|Ga0157297_10010639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1877	Open in IMG/M
3300012914\|Ga0157297_10298307	Not Available	605	Open in IMG/M
3300013308\|Ga0157375_10377185	Not Available	1585	Open in IMG/M
3300017792\|Ga0163161_10794340	Not Available	795	Open in IMG/M
3300017965\|Ga0190266_10388648	Not Available	769	Open in IMG/M
3300018000\|Ga0184604_10385299	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300018027\|Ga0184605_10145574	Not Available	1064	Open in IMG/M
3300018028\|Ga0184608_10058282	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300018051\|Ga0184620_10026352	Not Available	1493	Open in IMG/M
3300018054\|Ga0184621_10176281	Not Available	768	Open in IMG/M
3300018061\|Ga0184619_10108273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	1252	Open in IMG/M
3300018061\|Ga0184619_10432990	Not Available	589	Open in IMG/M
3300018066\|Ga0184617_1218059	Not Available	570	Open in IMG/M
3300018073\|Ga0184624_10022584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2362	Open in IMG/M
3300018076\|Ga0184609_10489354	Not Available	561	Open in IMG/M
3300018081\|Ga0184625_10284543	Not Available	865	Open in IMG/M
3300018465\|Ga0190269_10204304	Not Available	1073	Open in IMG/M
3300018465\|Ga0190269_11866488	Not Available	516	Open in IMG/M
3300019279\|Ga0184642_1050674	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300019356\|Ga0173481_10807598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300019867\|Ga0193704_1017558	Not Available	1453	Open in IMG/M
3300020016\|Ga0193696_1027389	Not Available	1528	Open in IMG/M
3300022756\|Ga0222622_10186053	Not Available	1368	Open in IMG/M
3300022883\|Ga0247786_1001990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3829	Open in IMG/M
3300023064\|Ga0247801_1020921	Not Available	885	Open in IMG/M
3300025901\|Ga0207688_10048691	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2368	Open in IMG/M
3300025908\|Ga0207643_10242080	Not Available	1109	Open in IMG/M
3300025923\|Ga0207681_11561418	Not Available	553	Open in IMG/M
3300025927\|Ga0207687_11701906	Not Available	541	Open in IMG/M
3300025931\|Ga0207644_11462478	Not Available	574	Open in IMG/M
3300025934\|Ga0207686_10864312	Not Available	728	Open in IMG/M
3300025935\|Ga0207709_10469238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	976	Open in IMG/M
3300025937\|Ga0207669_10656585	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025941\|Ga0207711_10254395	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300025942\|Ga0207689_10496311	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300025945\|Ga0207679_10813831	Not Available	852	Open in IMG/M
3300025972\|Ga0207668_11127099	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026023\|Ga0207677_10773690	Not Available	857	Open in IMG/M
3300026035\|Ga0207703_10708241	Not Available	958	Open in IMG/M
3300026075\|Ga0207708_10679694	Not Available	878	Open in IMG/M
3300026116\|Ga0207674_10072851	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300026121\|Ga0207683_10530967	Not Available	1087	Open in IMG/M
3300026142\|Ga0207698_10429669	Not Available	1270	Open in IMG/M
3300027665\|Ga0209983_1120331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300027717\|Ga0209998_10190191	Not Available	535	Open in IMG/M
3300028704\|Ga0307321_1069500	Not Available	687	Open in IMG/M
3300028705\|Ga0307276_10062752	Not Available	845	Open in IMG/M
3300028707\|Ga0307291_1141375	Not Available	611	Open in IMG/M
3300028708\|Ga0307295_10018149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300028712\|Ga0307285_10005097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2655	Open in IMG/M
3300028720\|Ga0307317_10026552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1791	Open in IMG/M
3300028720\|Ga0307317_10046149	Not Available	1389	Open in IMG/M
3300028721\|Ga0307315_10073373	Not Available	980	Open in IMG/M
3300028722\|Ga0307319_10015394	Not Available	2336	Open in IMG/M
3300028744\|Ga0307318_10016330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2382	Open in IMG/M
3300028755\|Ga0307316_10012618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2635	Open in IMG/M
3300028771\|Ga0307320_10003333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5776	Open in IMG/M
3300028787\|Ga0307323_10036714	Not Available	1711	Open in IMG/M
3300028796\|Ga0307287_10274765	Not Available	637	Open in IMG/M
3300028796\|Ga0307287_10421038	Not Available	502	Open in IMG/M
3300028811\|Ga0307292_10497110	Not Available	523	Open in IMG/M
3300028814\|Ga0307302_10026323	Not Available	2659	Open in IMG/M
3300028814\|Ga0307302_10440864	Not Available	645	Open in IMG/M
3300028819\|Ga0307296_10383829	Not Available	767	Open in IMG/M
3300028819\|Ga0307296_10833850	Not Available	502	Open in IMG/M
3300028878\|Ga0307278_10024162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2799	Open in IMG/M
3300028880\|Ga0307300_10292107	Not Available	550	Open in IMG/M
3300031114\|Ga0308187_10130285	Not Available	817	Open in IMG/M
3300033550\|Ga0247829_10220797	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.46%
Host-Associated	Host-Associated	36.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.96%
Plants	Host-Associated → Plants	36.54%
Aquatic	Environmental → Aquatic	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.27%
Sediment	Environmental → Aquatic → Sediment	11.54%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.73%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070683_1000426931	3300005329	Corn Rhizosphere	LRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0070668_1013129192	3300005347	Switchgrass Rhizosphere	VFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0070659_1004685591	3300005366	Corn Rhizosphere	LRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPADETPLST*
Ga0070701_102584682	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VTDFPIPKGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLS
Ga0070700_1004871222	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVHDTPMST*
Ga0068867_1000821194	3300005459	Miscanthus Rhizosphere	VARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0068857_1008066292	3300005577	Corn Rhizosphere	VARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0068861_1002358012	3300005719	Switchgrass Rhizosphere	VARLRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPADETPLST*
Ga0068870_105105842	3300005840	Miscanthus Rhizosphere	VTYFPIPKRPEIRQRVPRRYARAVARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISM
Ga0068860_1013567612	3300005843	Switchgrass Rhizosphere	LRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPADETPLST*
Ga0068862_1019278162	3300005844	Switchgrass Rhizosphere	GEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0068865_1012465031	3300006881	Miscanthus Rhizosphere	VARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVD
Ga0068865_1017332921	3300006881	Miscanthus Rhizosphere	VARLRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMG
Ga0105240_119666511	3300009093	Corn Rhizosphere	GRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPADETPLST*
Ga0105243_111340841	3300009148	Miscanthus Rhizosphere	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0105241_121209701	3300009174	Corn Rhizosphere	VARLRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTSLST*
Ga0105242_114839171	3300009176	Miscanthus Rhizosphere	RLRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPADETPLST*
Ga0105248_111592512	3300009177	Switchgrass Rhizosphere	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRVAVISMGPVDDTPLST*
Ga0126308_101051092	3300010040	Serpentine Soil	VAKLRFRLSTGEEIFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0126312_101629323	3300010041	Serpentine Soil	LRFKLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0126311_112277452	3300010045	Serpentine Soil	LEALSYARAVARLRFKLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPADDTPLST*
Ga0134125_106168271	3300010371	Terrestrial Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPMST*
Ga0105239_112483522	3300010375	Corn Rhizosphere	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVHDTPMST*
Ga0134127_107654892	3300010399	Terrestrial Soil	VARLRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0134122_111241121	3300010400	Terrestrial Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTSLST*
Ga0134123_126246731	3300010403	Terrestrial Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRVAVISMGPVDDTPLST*
Ga0138505_1000277371	3300010999	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0138513_1000158203	3300011000	Soil	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVI
Ga0105246_101626441	3300011119	Miscanthus Rhizosphere	LKFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPMST*
Ga0137374_101714993	3300012204	Vadose Zone Soil	MASLSFTLSTGEEVRKTVDHDQVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVT*
Ga0157281_10323641	3300012883	Soil	VAKLRFRLSTGEEVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0157284_100236601	3300012893	Soil	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0157299_100311991	3300012899	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPMST*
Ga0157289_101337662	3300012903	Soil	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPMST*
Ga0157301_101734401	3300012911	Soil	LRFRLSTGEEVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0157297_100106393	3300012914	Soil	LAKLRFRLSTGEEVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0157297_102983072	3300012914	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDAPLST*
Ga0157375_103771851	3300013308	Miscanthus Rhizosphere	LKFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST*
Ga0163161_107943401	3300017792	Switchgrass Rhizosphere	LRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPADETPLST
Ga0190266_103886482	3300017965	Soil	VAKLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0184604_103852991	3300018000	Groundwater Sediment	RGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0184605_101455742	3300018027	Groundwater Sediment	VGTAICSSTVAILRFTLSTGKEVRKTVDDDQVQAEIEAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVA
Ga0184608_100582822	3300018028	Groundwater Sediment	VTDFPIPKGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPLST
Ga0184620_100263522	3300018051	Groundwater Sediment	VARLRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0184621_101762811	3300018054	Groundwater Sediment	LRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPLST
Ga0184619_101082732	3300018061	Groundwater Sediment	MAGLRFTLSTGEEVRKTVDDDEVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVA
Ga0184619_104329901	3300018061	Groundwater Sediment	VGTAICSSTVAILRFTLSTGKEVRKTVDDDQVQAEIEAFRTHQREYGADFFPIDNGVWVLRAAVISIGPVAEPFVT
Ga0184617_12180591	3300018066	Groundwater Sediment	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0184624_100225845	3300018073	Groundwater Sediment	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0184609_104893542	3300018076	Groundwater Sediment	SRPNSERPSDPTTRSRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0184625_102845431	3300018081	Groundwater Sediment	LRFRLSTGEEVFKTIESDDQVSAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0190269_102043042	3300018465	Soil	LRFRLSTGEEVFKTIESDDHVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0190269_118664881	3300018465	Soil	MASLSFTLSTGEEVRKTVDHDQVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFV
Ga0184642_10506743	3300019279	Groundwater Sediment	MASLMFTLSTGEEVRKTVDDDEVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVA
Ga0173481_108075982	3300019356	Soil	LSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0193704_10175583	3300019867	Soil	RSNGLTTPILRGRAIRQHVARRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0193696_10273895	3300020016	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPLST
Ga0222622_101860533	3300022756	Groundwater Sediment	FKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0247786_10019906	3300022883	Soil	LAKLRFRLSTGEEVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0247801_10209212	3300023064	Soil	LAKLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207688_100486913	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VARLRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207643_102420802	3300025908	Miscanthus Rhizosphere	VTYFPIPKRPEIRQRVPRRYARAVARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207681_115614181	3300025923	Switchgrass Rhizosphere	VARLRFRLSTGEEVFKTIESDDQVAAEIDAFRNHQGEYGADFFPADDGLWVLRLAVISMGPADETPLST
Ga0207687_117019061	3300025927	Miscanthus Rhizosphere	GASRSVARKLTHFPIPKGRAIRQRVPRRYARAVARLRFSLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPADETPLST
Ga0207644_114624781	3300025931	Switchgrass Rhizosphere	VTDFPIPKGRAIRQRVPRRYARAVARLRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFP
Ga0207686_108643121	3300025934	Miscanthus Rhizosphere	LSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207709_104692382	3300025935	Miscanthus Rhizosphere	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPMST
Ga0207669_106565851	3300025937	Miscanthus Rhizosphere	RAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPMST
Ga0207711_102543953	3300025941	Switchgrass Rhizosphere	VARLKFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207689_104963112	3300025942	Miscanthus Rhizosphere	LRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207679_108138312	3300025945	Corn Rhizosphere	VARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207668_111270991	3300025972	Switchgrass Rhizosphere	VPRRYARAVARLRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207677_107736901	3300026023	Miscanthus Rhizosphere	VTYFPIPKRPEIRQRVPRRYARAVARLKFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207703_107082411	3300026035	Switchgrass Rhizosphere	RQRVPRRYARAVARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207708_106796942	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVHDTPMST
Ga0207674_100728511	3300026116	Corn Rhizosphere	IRQRVPRRYARAVARLRFRLSTGEDVFKTIESDDRVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207683_105309671	3300026121	Miscanthus Rhizosphere	VTYFPIPKRPEIRQRVPRRYARAVARLKFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0207698_104296692	3300026142	Corn Rhizosphere	LRSRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0209983_11203312	3300027665	Arabidopsis Thaliana Rhizosphere	SVALKRTHYPILRGRAIRRRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVHDTPMST
Ga0209998_101901911	3300027717	Arabidopsis Thaliana Rhizosphere	VAKLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307321_10695002	3300028704	Soil	RAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307276_100627522	3300028705	Soil	LRFRLSTGEDVFKTIESDDQVPAEIDAFRNHQGDYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307291_11413751	3300028707	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307295_100181495	3300028708	Soil	YPILRGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307285_100050971	3300028712	Soil	VFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307317_100265525	3300028720	Soil	GRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307317_100461491	3300028720	Soil	LSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWLLRLAVISMGPVDETPLST
Ga0307315_100733731	3300028721	Soil	STGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLS
Ga0307319_100153941	3300028722	Soil	TRSRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307318_100163304	3300028744	Soil	EVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307316_100126184	3300028755	Soil	LRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307320_100033339	3300028771	Soil	VARLRFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDETPLST
Ga0307323_100367141	3300028787	Soil	RESAPILRGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307287_102747651	3300028796	Soil	TGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0307287_104210381	3300028796	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGAEFFPADDGLWVLRLAV
Ga0307292_104971102	3300028811	Soil	FKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0307302_100263236	3300028814	Soil	RFRLSTGEEVFKTIEADDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0307302_104408641	3300028814	Soil	MASLMFTLSTGEEVRKTVDHDQVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVT
Ga0307296_103838292	3300028819	Soil	DRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0307296_108338501	3300028819	Soil	LRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVIS
Ga0307278_100241622	3300028878	Soil	MASLSFTLSTGEEVRKTVDHDQVQAEIDAFRTHQREYGADFFPVDDGVWVLRAAVISIGPVAEPFVT
Ga0307300_102921072	3300028880	Soil	FRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGDFFPADDGLWVLRLAVISMGPVDETPLST
Ga0308187_101302852	3300031114	Soil	RFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTPLST
Ga0247829_102207971	3300033550	Soil	RGRAIRQRVPRRYARAVARLRFRLSTGEEVFKTIESDDQVPAEIDAFRNHQGEYGGEFFPADDGLWVLRLAVISMGPVDDTSLST

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096755

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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