Metagenome / Metatranscriptome Family F096734

Overview

Basic Information

• Family ID: F096734
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 104
• Average Sequence Length: 39 residues
• Representative Sequence: LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSF
• Number of Associated Samples: 89
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 8.16 %
• % of genes near scaffold ends (potentially truncated): 94.23 %
• % of genes from short scaffolds (< 2000 bps): 94.23 %
• Associated GOLD sequencing projects: 88
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (98.077 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.269 % of family members)
• Environment Ontology (ENVO): Unclassified (28.846 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 43.59%
  Coil/Unstructured: 56.41%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04326	AlbA_2	0.96
PF13185	GAF_2	0.96
PF10099	RskA	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
All Organisms	root	All Organisms	1.92 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
cellular organisms	root	All Organisms → cellular organisms	1.92 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.92 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002659|Ga0005474J37262_100303	Not Available	678
3300002661|Ga0005496J37278_100085	Not Available	684
3300002662|Ga0005456J37224_101842	Not Available	594
3300002874|Ga0006867J43190_100326	Not Available	611
3300004139|Ga0058897_10063059	Not Available	599
3300004799|Ga0058863_11944679	Not Available	594
3300004800|Ga0058861_12065542	Not Available	530
3300006938|Ga0081245_1070480	Not Available	592
3300007327|Ga0075016_1089418	Not Available	544
3300007526|Ga0075022_1018519	Not Available	522
3300007526|Ga0075022_1021962	Not Available	522
3300007526|Ga0075022_1024896	Not Available	569
3300007526|Ga0075022_1717102	Not Available	583
3300009580|Ga0115596_1119080	Not Available	532
3300010102|Ga0127453_1076947	Not Available	577
3300010103|Ga0127500_1015557	Not Available	591
3300010154|Ga0127503_10154931	Not Available	563
3300010861|Ga0126349_1019694	Not Available	599
3300010861|Ga0126349_1077399	Not Available	592
3300010862|Ga0126348_1163519	Not Available	587
3300010862|Ga0126348_1182140	Not Available	589
3300010866|Ga0126344_1130554	Not Available	661
3300010866|Ga0126344_1155151	Not Available	564
3300011016|Ga0138589_100440	Not Available	562
3300011017|Ga0138558_104299	Not Available	598
3300011046|Ga0138600_169334	Not Available	574
3300011120|Ga0150983_10994292	Not Available	587
3300011340|Ga0151652_12761234	Not Available	565
3300012387|Ga0134030_1132463	Not Available	577
3300012396|Ga0134057_1232621	Not Available	539
3300012401|Ga0134055_1352901	Not Available	587
3300012402|Ga0134059_1164761	Not Available	590
3300012410|Ga0134060_1288057	Not Available	583
3300013064|Ga0154013_100760	Not Available	565
3300019162|Ga0184597_118447	Not Available	588
3300019165|Ga0184589_108630	Not Available	588
3300019179|Ga0184593_109698	Not Available	584
3300019184|Ga0184590_110045	Not Available	567
3300019184|Ga0184590_131835	Not Available	590
3300019186|Ga0184588_109510	Not Available	594
3300019187|Ga0184584_107486	Not Available	587
3300019232|Ga0180114_1149195	Not Available	583
3300019232|Ga0180114_1294066	Not Available	589
3300019233|Ga0184645_1143255	Not Available	588
3300019245|Ga0187791_1111968	Not Available	563
3300019245|Ga0187791_1223146	Not Available	599
3300019245|Ga0187791_1485720	Not Available	663
3300019248|Ga0180117_1043830	Not Available	580
3300019251|Ga0187795_1160229	Not Available	585
3300019257|Ga0180115_1083412	Not Available	591
3300019265|Ga0187792_1329323	Not Available	656
3300020075|Ga0206349_1148054	Not Available	519
3300020076|Ga0206355_1497379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1997
3300020078|Ga0206352_11361960	Not Available	545
3300020610|Ga0154015_1126349	Not Available	599
3300021151|Ga0179584_1344998	Not Available	592
3300021286|Ga0179583_1091061	Not Available	589
3300021315|Ga0179958_1043825	Not Available	588
3300021857|Ga0213849_1035948	Not Available	587
3300021858|Ga0213852_1162189	Not Available	592
3300021858|Ga0213852_1355977	Not Available	591
3300021860|Ga0213851_1339525	Not Available	581
3300021909|Ga0213846_1122955	Not Available	607
3300021929|Ga0213845_1012404	Not Available	584
3300021938|Ga0213847_1197835	Not Available	577
3300022467|Ga0224712_10518423	Not Available	577
3300022503|Ga0242650_1016120	Not Available	593
3300022505|Ga0242647_1032127	Not Available	570
3300022511|Ga0242651_1033971	Not Available	583
3300022527|Ga0242664_1142438	Not Available	524
3300022529|Ga0242668_1094812	Not Available	598
3300022529|Ga0242668_1100896	Not Available	586
3300022531|Ga0242660_1183405	Not Available	567
3300022532|Ga0242655_10231323	Not Available	577
3300022709|Ga0222756_1046038	Not Available	643
3300022720|Ga0242672_1086169	Not Available	593
3300022720|Ga0242672_1086585	Not Available	592
3300023533|Ga0247537_102290	Not Available	577
3300023551|Ga0247546_102196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712
3300026392|Ga0213908_140448	Not Available	500
3300030528|Ga0210277_10827251	Not Available	558
3300030589|Ga0210255_10553671	Not Available	591
3300030622|Ga0265391_10184147	Not Available	622
3300030730|Ga0307482_1207783	Not Available	598
3300030760|Ga0265762_1154889	Not Available	548
3300030763|Ga0265763_1033867	Not Available	591
3300030776|Ga0075396_1043858	Not Available	580
3300030852|Ga0075389_11341608	Not Available	578
3300030877|Ga0265777_115929	Not Available	590
3300030923|Ga0138296_1213064	Not Available	609
3300030923|Ga0138296_1888610	Not Available	604
3300030987|Ga0308155_1023939	Not Available	579
3300031017|Ga0265744_112291	Not Available	548
3300031042|Ga0265749_102033	Not Available	663
3300031097|Ga0308188_1026131	Not Available	583
3300031446|Ga0170820_15406617	Not Available	601
3300031677|Ga0307480_1019334	Not Available	541
3300031677|Ga0307480_1022059	Not Available	519

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	21.15%
Human	Host-Associated → Human	1.92%
Plants	Host-Associated → Plants	1.92%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Freshwater	Environmental → Aquatic → Freshwater	21.15%
Digestive System	Host-Associated → Human → Digestive System	1.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	19.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.81%
Loam	Environmental → Terrestrial → Soil → Loam	4.81%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.38%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	13.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.92%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.96%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002659	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF123 (Metagenome Metatranscriptome, Counting Only)	Environmental
3300002661	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF145 (Metagenome Metatranscriptome, Counting Only)	Environmental
3300002662	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF105 (Metagenome Metatranscriptome, Counting Only)	Environmental
3300002874	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 68 (Metagenome Metatranscriptome, Counting Only)	Environmental
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated
3300006938	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A001 (Metagenome Metatranscriptome) (version 2)	Environmental
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental
3300009580	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)	Environmental
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011016	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 81 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011017	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 39 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011046	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 68 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental
3300013064	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome)	Environmental
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300019162	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3 metaT (Metagenome Metatranscriptome)	Environmental
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental
3300019179	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI2 metaT (Metagenome Metatranscriptome)	Environmental
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental
3300019186	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE3 metaT (Metagenome Metatranscriptome)	Environmental
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental
3300021857	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)	Environmental
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300021909	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - NH:C (Metagenome Metatranscriptome)	Environmental
3300021929	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)	Environmental
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental
3300023533	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE5 (Metagenome Metatranscriptome)	Environmental
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental
3300026392	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0906-MT (Metagenome Metatranscriptome)	Environmental
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental
3300030589	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)	Environmental
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental
3300030852	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)	Environmental
3300030877	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)	Environmental
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental
3300031042	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU6 (Metagenome Metatranscriptome)	Environmental
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005474J37262_1003031	3300002659	Forest Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFEP
Ga0005496J37278_1000851	3300002661	Forest Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFEPL
Ga0005456J37224_1018421	3300002662	Forest Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFE
Ga0006867J43190_1003261	3300002874	Peatlands Soil	LQVARSSFAPRSAAIILFITQRFGSSFQIRYFLPGSLSFE
Ga0058897_100630592	3300004139	Forest Soil	LQVARSSFAPRRAATILLITLRFGSSFQIRYFLPGSLSFEP
Ga0058863_119446791	3300004799	Host-Associated	LQVARSSFTPRSAATILFITQRHGSSFQIRYFLPGSLSFE
Ga0058861_120655421	3300004800	Host-Associated	LQVARSSFAPRDAATILFVTQRRGSSFQIRYFLPGSLSFE
Ga0081245_10704801	3300006938	Tropical Rainforest Soil	LQVARSSFAPRCAETISYLLRIGSSFRIRYFLPGSLSFE
Ga0079219_106764581	3300006954	Agricultural Soil	LQVARSSFAPRNAATILVIAQRYRSSVQIRYFLPGSLSFEPLGTTAIM
Ga0075016_10894181	3300007327	Watersheds	LQVARSSFTPRRAAIILFITQRFGSSFQIRYFLPGSLS
Ga0075022_10185191	3300007526	Watersheds	LQVARSSFAPRSAATILFITQRYGSSFQIRYFLPGSLSF
Ga0075022_10219621	3300007526	Watersheds	LQVARSSFTPRRAANNFLFNARFGSSFQIRYFLPGSL
Ga0075022_10248961	3300007526	Watersheds	LQVARSSFAPRSAATVLIITQRYGSSFQIRYFLPGSL
Ga0075022_17171021	3300007526	Watersheds	LQVARSSFTPRSAATILVITQRYGSSFQIRYFLPGSL
Ga0115596_11190801	3300009580	Wetland	LQVARSSFAPRSAATILFIAQRFGSSFQIRYFLPGSLSLK
Ga0127453_10769471	3300010102	Grasslands Soil	LQVARSSFTPRSAATVLFITQRFGSSLQIRYFLPGSL
Ga0127500_10155571	3300010103	Grasslands Soil	LQVARSSFTPRSAATVLFITQRFGSSLQIRYFLPGSLS
Ga0127503_101549311	3300010154	Soil	LQVTRSSFTPRSAATILVITQRYGSSFQIRYFLPGSL
Ga0126349_10196941	3300010861	Boreal Forest Soil	LQVARSSFAPRSAATILVITQRYGSSFQIRYFLPGSLSFEP
Ga0126349_10773991	3300010861	Boreal Forest Soil	LQVARSSFAPRSAATILVITQRFGSSFQIRYFLPGSLSF
Ga0126348_11635191	3300010862	Boreal Forest Soil	LQVARSSFAPRSAATILVITQRYGSSFQIRYFLPGSLS
Ga0126348_11821401	3300010862	Boreal Forest Soil	LQVARSSFAPRSAATILIITQRYGSSFQIRYFLPGSLS
Ga0126344_11305541	3300010866	Boreal Forest Soil	LQVARSSFAPRSAATILFVALHYGSSVQIRYFLPGSLSFED
Ga0126344_11551511	3300010866	Boreal Forest Soil	LQVARFSFAPRCARIITYHQRIGSSFQIRYFLPGSL
Ga0138589_1004401	3300011016	Peatlands Soil	LQVARSSFAPRSAAIILFITQRFGSSFQIRYFLPGSL
Ga0138558_1042991	3300011017	Peatlands Soil	LQVARSSFAPRSAVTILVITQRYGSSFQIRYFLPGSLSFED
Ga0138600_1693341	3300011046	Peatlands Soil	LQVARSSFAPRSAAIILFITQRFGSSFQIRYFLPGSLSFEDV
Ga0150983_109942921	3300011120	Forest Soil	LQVARSSFTPRSAATILFITQRHGSSFQIRYFLPGSLS
Ga0151652_127612341	3300011340	Wetland	LQVARFSFAPRSAATILFITQRFGSSFQIRYFLPGSL
Ga0134030_11324631	3300012387	Grasslands Soil	LQVARSSFAPRSAATVLWIAQRFGSSFQIRYFLPGSLSF
Ga0134057_12326211	3300012396	Grasslands Soil	LQVARSSFTPRSAATVLFITQRFGSSLQIRYFLPGSLSFEDV
Ga0134055_13529011	3300012401	Grasslands Soil	LQVARSSFTPRSAATILVITQRHGSSFQIRYFLPGSL
Ga0134059_11647611	3300012402	Grasslands Soil	LQVARSSFTPRSAATVLFITQRFGSSLQIRYFLPGSLSF
Ga0134060_12880571	3300012410	Grasslands Soil	LQVARFSFAPRSAATILLITQRYGSSFQIRYFLPGSL
Ga0154013_1007601	3300013064	Corn, Switchgrass And Miscanthus Rhizosphere	LQVARSSFAPRCAATVLFIAQRFGSSFQIRYFLPGSL
Ga0157376_107866481	3300014969	Miscanthus Rhizosphere	LQVARSSFAPRSAATILFITLRFGSSFQIRYFLPGSLSFEPLGTTAIMGLIAS
Ga0184597_1184471	3300019162	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSLS
Ga0184589_1086301	3300019165	Soil	LQVARSSFAPRSAATVLFITQRFGSSFQIRYFLPGSLS
Ga0184593_1096981	3300019179	Soil	LQVARSSFAPRRAATILFITQRFGSSVQIRYFLPGSL
Ga0184590_1100451	3300019184	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSLSLE
Ga0184590_1318351	3300019184	Soil	LQVARSSFAPRSAATVLFITQRFGSSFQIRYFLPGSLSF
Ga0184588_1095101	3300019186	Soil	LQVARSSFAPRSAATVLFITQRFGSSFQIRYFLPGSLSFK
Ga0184584_1074861	3300019187	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSLSFE
Ga0180114_11491951	3300019232	Groundwater Sediment	LQVARSSFAPRSAATILFITQRYGSSFQIRYFLPGSLSFEP
Ga0180114_12940661	3300019232	Groundwater Sediment	LQVARSSFAPRNAAKILIIAQRCGSSFQIRYFLPGSLS
Ga0184645_11432551	3300019233	Groundwater Sediment	LQVARSSFAPRNAATGLIIALRYGSSFQIRYFLPGSLSF
Ga0187791_11119681	3300019245	Peatland	LQVARSSFAPRRAAIILFITLRFGSSFQIRYFLPGSLF
Ga0187791_12231461	3300019245	Peatland	LQVARSSFAPRGAATILFITQRFGSSFQIRYFLPGSLSFEP
Ga0187791_14857201	3300019245	Peatland	LQVARSSFAPRSAATILFIAQRFGSSFQIRYFLPGSLSF
Ga0180117_10438301	3300019248	Groundwater Sediment	LQVARSSFAPRSAATILIITQRYGSSFQIRYFLPGSL
Ga0187795_11602291	3300019251	Peatland	LQVARSSFAPRSAATILFIAQRFGSSFQIRYFLPGSL
Ga0180115_10834121	3300019257	Groundwater Sediment	LQVARSSFAPRSAATILIITQRYGSSFQIRYFLPGSLSF
Ga0187792_13293231	3300019265	Peatland	LQVARSSFAPRRAAIILLITQRFGSSFQIRYFLPGSLSFEP
Ga0206349_11480541	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LQVARSSFAPRSAATILFITLRFGSSFQIRYFLPGSLSF
Ga0206355_14973791	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	ARSSFAPRSAAIILLITQRFGSSVQIRYFLPGSAELLG
Ga0206352_113619601	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LQVARSSFAPRSAATILFITLRFGSSFQIRYFLPGSLS
Ga0210399_104297971	3300020581	Soil	PRSAATVLFITQRYGSSFQIRYFLPGSLSFKPLGTRIIMLPKQLCRQ
Ga0154015_11263491	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	LQVARSSFAPRRAAIVLFITQRVGSSFQIRYFLPGSLSFEP
Ga0179584_13449981	3300021151	Vadose Zone Soil	LQVARFSFTPRSAATILVITRRYGSSFQIRYFLPGSLSF
Ga0179583_10910611	3300021286	Vadose Zone Soil	LQVARFSFTPRSAATILVITRRYGSSFQIRYFLPGSLS
Ga0179958_10438251	3300021315	Vadose Zone Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLS
Ga0213854_12748381	3300021855	Watersheds	LQVARFSFAPRCARIITYHQRIGSSFQIRYFLPGSLSFK
Ga0213849_10359481	3300021857	Watersheds	LQVARSSFTPRSAATILVITQRCGSSFQIRYFLPGSLS
Ga0213852_11621891	3300021858	Watersheds	LQVARFSFAPRCARIITYHQRIGSSFQIRYFLPGSLS
Ga0213852_13559771	3300021858	Watersheds	LQVARSSFAPRRAAIILFIAQRFGSSFQIRYFLPGSLSF
Ga0213851_13395251	3300021860	Watersheds	LQVARSSFAPRSAATILLITQRFGSSFQIRYFLPGSLSFK
Ga0213853_114558692	3300021861	Watersheds	LQVARFSFAPRCARIITYHQRIGSSFQIRYFLPGSLSF
Ga0213846_11229551	3300021909	Watersheds	LQVARSSFTPRSAATILFITQRFGSSFQIRYFLPGSLS
Ga0213845_10124041	3300021929	Watersheds	LQVARSSFAPRSAATVLFVTQRYGSSFQIRYFLPGSL
Ga0213847_11978351	3300021938	Watersheds	LQVARSSFAPRSAATILFITQRYGSSFQIRYFLPGSLSFE
Ga0224712_105184231	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LQVARSSFAPRRAAIVLFITQRFGSSFQIRYFLPGSL
Ga0242650_10161201	3300022503	Soil	LQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSLSFE
Ga0242647_10321271	3300022505	Soil	LQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSLSF
Ga0242651_10339711	3300022511	Soil	LQVARSSFAPRSAATILFITQRYGSSFQIRYFLPGSLS
Ga0242664_11424381	3300022527	Soil	LQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSLSFK
Ga0242668_10948121	3300022529	Soil	LQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSLSFEP
Ga0242668_11008961	3300022529	Soil	LQVARSSFAPRRAATILFVTQRFGSSFQIRYFLPGSLS
Ga0242660_11834051	3300022531	Soil	MQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSL
Ga0242655_102313231	3300022532	Soil	LQVARSSFAPRSAATILLITQRFGSSFQIRYFLPGSL
Ga0222756_10460381	3300022709	Soil	LQVARSSFAPRSAATILFVTQRFGSSFQIRYFLPGSL
Ga0242672_10861691	3300022720	Soil	LQVARSSFTSRRAATILFVTQRFGSSLQIRYFLPGSLFLK
Ga0242672_10865851	3300022720	Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFK
Ga0247537_1022901	3300023533	Soil	LQVARSSFAPRSAATILFITQRCGSSFQIRYFLPGSL
Ga0247546_1021961	3300023551	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSLSL
Ga0213908_1404481	3300026392	Enriched Soil Aggregate	LQVARSSFAPRSAATILFITQRYGSSFQIRYFLPGSL
Ga0268264_100134711	3300028381	Switchgrass Rhizosphere	KLALQVARSSFAPRSAAKTFNDHSRYGSSFQIRYFLPGSLSFEPLGTTVIMLPEAVLRQ
Ga0210277_108272511	3300030528	Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPG
Ga0210255_105536711	3300030589	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSL
Ga0265391_101841471	3300030622	Soil	LQVARSSFAPRRAATILFITQRFGSSFQIRYFLPGSLSF
Ga0307482_12077831	3300030730	Hardwood Forest Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFKP
Ga0265762_11548891	3300030760	Soil	LQVARSSFAPRSAATGLFITQRYGSSFQIRYFLPGSL
Ga0265763_10338671	3300030763	Soil	LQVARSSFAPRSAATILFVTQRFGSSFQIRYFLPGSLSF
Ga0075396_10438581	3300030776	Soil	LQVARSSFAPRRAAIVLFITQRFGSSFQIRYFLPGSLSFEPLG
Ga0075389_113416082	3300030852	Soil	LQVARSSFAPRRAAIVLFITQRFGSSFQIRYFLPGSLSFE
Ga0265777_1159291	3300030877	Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSF
Ga0138296_12130641	3300030923	Soil	LQVARSSFAPRSAATILFITQRFGSSFQIRYFLPGSLSFEPLG
Ga0138296_18886101	3300030923	Soil	LQVARSSFAPRSAATILFVTQRFGSSFQIRYFLPGSLSFEP
Ga0308155_10239391	3300030987	Soil	LQVARSSFAPRNAATGLIIALRYGSSFQIRYFLPGSL
Ga0265744_1122911	3300031017	Soil	LQVARSSFAPRSAVTILLITQRYGSSFQIRYFLPGSLSFK
Ga0265749_1020331	3300031042	Soil	LQVARSSFAPRSAATILVITQRFGSSVQIRYFLPGSLSF
Ga0308188_10261311	3300031097	Soil	LQVARSSFTPRRAATILFITLRFGSPFQIRYFLPGS
Ga0170820_154066171	3300031446	Forest Soil	LQVARSSFTPRSAATILLITSRFGSSLQIRYFLPGSLSFE
Ga0307480_10193341	3300031677	Hardwood Forest Soil	LQVARSSFAPRDAATILFVTQRRGSSFQIRYFLPGSLS
Ga0307480_10220591	3300031677	Hardwood Forest Soil	LQVARSSFAPRNAATILFVTQRHGSSFQIRYFLPGSLS