Metagenome Family F096725

Basic Information
Family ID	F096725
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	66 residues
Representative Sequence	MERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Number of Associated Samples	68
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.19 %
% of genes near scaffold ends (potentially truncated)	46.15 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (74.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (58.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (74.038 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104 1deepsgr_01534800 2JGI10214J12806_113654311 3Ga0062593_1013603711 4Ga0062594_1007129093 5Ga0066811_10053822 6Ga0065712_103449812 7Ga0065712_104777932 8Ga0070676_102772303 9Ga0070676_103961591 10Ga0070690_1002067603 11Ga0070670_1000823372 12Ga0070670_1001735453 13Ga0070670_1003792684 14Ga0070670_1011979791 15Ga0070670_1015022402 16Ga0070670_1015313422 17Ga0070677_102684692 18Ga0070677_104879891 19Ga0068868_1008542921 20Ga0068868_1013671901 21Ga0070689_1004361983 22Ga0070692_110492882 23Ga0070668_1007064032 24Ga0070669_1003351822 25Ga0070669_1006858282 26Ga0070675_1003908292 27Ga0070675_1008862341 28Ga0070675_1013637202 29Ga0070675_1013818371 30Ga0070674_1012624811 31Ga0070673_1019000021 32Ga0070705_1004302782 33Ga0070700_1012568722 34Ga0070700_1016890791 35Ga0070663_1004332602 36Ga0070678_1003449622 37Ga0068867_1017440931 38Ga0070695_1009284492 39Ga0070665_1009268373 40Ga0068864_1003661692 41Ga0068861_1004867672 42Ga0068870_107001052 43Ga0075419_103260051 44Ga0105245_117288832 45Ga0105245_127834131 46Ga0111538_118675132 47Ga0105246_111907271 48Ga0157288_102427802 49Ga0157291_103084521 50Ga0157298_103716622 51Ga0157302_100667331 52Ga0157310_102580372 53Ga0157378_105644951 54Ga0157378_110763291 55Ga0157378_124050012 56Ga0163162_113685131 57Ga0157375_113717281 58Ga0157375_125945602 59Ga0157375_129097013 60Ga0157375_135026841 61Ga0132257_1043470352 62Ga0163161_116205022 63Ga0190266_100108273 64Ga0190266_113808571 65Ga0184634_100484393 66Ga0184611_11685741 67Ga0184624_100703492 68Ga0184628_100435785 69Ga0184628_100978442 70Ga0184628_101044332 71Ga0184628_102660222 72Ga0190274_102889473 73Ga0190274_108311442 74Ga0190274_131430831 75Ga0193753_100929363 76Ga0210380_100187893 77Ga0210380_103686742 78Ga0210380_104415731 79Ga0210380_105171532 80Ga0222622_100550551 81Ga0222622_103331112 82Ga0207643_103361272 83Ga0207643_109802322 84Ga0207649_106136941 85Ga0207681_100283488 86Ga0207681_109772361 87Ga0207650_100559632 88Ga0207650_101881463 89Ga0207650_103175723 90Ga0207659_103469441 91Ga0207701_101723614 92Ga0207701_101735302 93Ga0207686_102079722 94Ga0207704_103202673 95Ga0207704_114374351 96Ga0207668_101163333 97Ga0207678_109002301 98Ga0207708_103348492 99Ga0207641_101693083 100Ga0207676_124024841 101Ga0207683_104537482 102Ga0307497_100375002 103Ga0310886_102173013 104Ga0310903_108250561
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104 1deepsgr_01534800 2Ga0062593_1013603711 3Ga0062594_1007129093 4Ga0070670_1000823372 5Ga0070670_1011979791 6Ga0070677_102684692 7Ga0070677_104879891 8Ga0070668_1007064032 9Ga0070674_1012624811 10Ga0068870_107001052 11Ga0105245_117288832 12Ga0157288_102427802 13Ga0157298_103716622 14Ga0157378_105644951 15Ga0132257_1043470352 16Ga0190274_131430831 17Ga0193753_100929363 18Ga0210380_103686742 19Ga0210380_105171532 20Ga0207678_109002301 21Ga0207708_103348492 22Ga0310903_108250561
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0310886_102173013 2Ga0070670_1003792684 3Ga0070677_102684692 4Ga0070668_1007064032 5Ga0070669_1006858282 6Ga0068870_107001052 7Ga0105245_117288832 8Ga0111538_118675132 9Ga0157288_102427802 10Ga0157291_103084521 11Ga0157378_105644951 12Ga0132257_1043470352 13Ga0190266_113808571 14Ga0184628_101044332 15Ga0190274_131430831 16Ga0193753_100929363 17Ga0210380_100187893 18Ga0210380_103686742 19Ga0210380_104415731 20Ga0222622_100550551 21Ga0207659_103469441 22Ga0207708_103348492
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.45% β-sheet: 0.00% Coil/Unstructured: 42.55%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13411	MerR_1	25.00
PF09278	MerR-DNA-bind	6.73
PF07238	PilZ	4.81
PF07589	PEP-CTERM	3.85
PF00216	Bac_DNA_binding	2.88
PF00565	SNase	2.88
PF00847	AP2	1.92
PF04471	Mrr_cat	0.96
PF00873	ACR_tran	0.96
PF04909	Amidohydro_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	6.73
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	2.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	25.96 %
Unclassified	root	N/A	74.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	25.96 %
Unclassified	root	N/A	74.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.96 %
Unclassified	root	N/A	74.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.04 %
Unclassified	root	N/A	74.04 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Unclassified	root	N/A	74.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Unclassified	root	N/A	74.04 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.96 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Unclassified	root	N/A	74.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Unclassified	root	N/A	74.04 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Desulfobacterales bacterium S5133MH16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Unclassified	root	N/A	74.04 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.96 %
Bosea sp. RAC05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. RAC05	0.96 %
Desulfobacterales bacterium S5133MH16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH16	0.96 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.96 %
Unclassified	root	N/A	74.04 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_10014	Not Available	833	Open in IMG/M
3300000891\|JGI10214J12806_11365431	Not Available	631	Open in IMG/M
3300004114\|Ga0062593_101360371	Not Available	756	Open in IMG/M
3300005093\|Ga0062594_100712909	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300005185\|Ga0066811_1005382	Not Available	814	Open in IMG/M
3300005290\|Ga0065712_10344981	Not Available	784	Open in IMG/M
3300005290\|Ga0065712_10477793	Not Available	663	Open in IMG/M
3300005328\|Ga0070676_10277230	Not Available	1128	Open in IMG/M
3300005328\|Ga0070676_10396159	Not Available	959	Open in IMG/M
3300005330\|Ga0070690_100206760	Not Available	1368	Open in IMG/M

Showing 1 to 10 of 104 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	40.38%
Host-Associated	Host-Associated	59.62%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	12.50%
Plants	Host-Associated → Plants	59.62%
Terrestrial	Environmental → Terrestrial	27.88%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.35%
Sediment	Environmental → Aquatic → Sediment	8.65%
Soil	Environmental → Terrestrial → Soil	27.88%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.46%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	28.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	28.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	9.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	16.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 68 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01534800	2199352025	Soil	MMERIDNELECSARELLAYLDTESELEKSLPFIVNIFVXXXRAAVFAKAARTLEPAQRCRIYRHCRG
JGI10214J12806_113654311	3300000891	Soil	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCR
Ga0062593_1013603711	3300004114	Soil	MNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRAAVFAKAARTLAPAQTQFPELFISK*
Ga0062594_1007129093	3300005093	Soil	LNEIDNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRI
Ga0066811_10053822	3300005185	Soil	MERIDNELECSARELLAYLDTESELEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRC
Ga0065712_103449812	3300005290	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0065712_104777932	3300005290	Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRC
Ga0070676_102772303	3300005328	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQ
Ga0070676_103961591	3300005328	Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAIFAKAARTLEPAQRCRIYRHCRG*
Ga0070690_1002067603	3300005330	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070670_1000823372	3300005331	Switchgrass Rhizosphere	MGSFFFNDNELECRARELLAYPDNEAEIERALPFPVGLIVKEMRAAVFAKAVRTLAPAHRCRIYRNCG*
Ga0070670_1001735453	3300005331	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESELEKSLPFIVNVFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070670_1003792684	3300005331	Switchgrass Rhizosphere	LNEIDNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRIYRNCRLS*
Ga0070670_1011979791	3300005331	Switchgrass Rhizosphere	DNELECRARELLAYLHADVEIEESLPFAVGFLIEKMRAAVFAKAARTLAPAHRCRLYRHSSRTAIFK
Ga0070670_1015022402	3300005331	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG*
Ga0070670_1015313422	3300005331	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070677_102684692	3300005333	Miscanthus Rhizosphere	VNVDNELECRARELLAYLDTDLAVEEASPFAVGFLVEKMRAATFAKAARTRAPAHRCRMYRHCRL*
Ga0070677_104879891	3300005333	Miscanthus Rhizosphere	ELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ*
Ga0068868_1008542921	3300005338	Miscanthus Rhizosphere	RIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG*
Ga0068868_1013671901	3300005338	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRC
Ga0070689_1004361983	3300005340	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESELEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQR
Ga0070692_110492882	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESDIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ*QS
Ga0070668_1007064032	3300005347	Switchgrass Rhizosphere	MDGMNKLDNELECRCRELLAYLDKELAVEESLPFAVGYLVEQMRAAVFAKTVRTLAPAHRCRIYGRCR*
Ga0070669_1003351822	3300005353	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ*
Ga0070669_1006858282	3300005353	Switchgrass Rhizosphere	DKAHLIVNQFDNELECRARELLAYLDNEAEIERALPFPVGLMVKEMRAAVFAKAARTLAPAHRCRIYRRCRV*
Ga0070675_1003908292	3300005354	Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070675_1008862341	3300005354	Miscanthus Rhizosphere	DNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAIFAKAARTLEPAQRCRIYRHCRG*
Ga0070675_1013637202	3300005354	Miscanthus Rhizosphere	MNKLDNELECRARELLAYLDTELAVEESLPFALGFLVEQMRAAVFSKATRTLERAHRCRIYRQCRPWW
Ga0070675_1013818371	3300005354	Miscanthus Rhizosphere	MDTTDNELECRARELLAYLHADVEIEESLPFAVGFLIEKMRAAVFAKAARTLAPAHRCRLYRHSSRTA*
Ga0070674_1012624811	3300005356	Miscanthus Rhizosphere	ELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070673_1019000021	3300005364	Switchgrass Rhizosphere	ELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG*
Ga0070705_1004302782	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEVEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG*
Ga0070700_1012568722	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SAMMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070700_1016890791	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	EIDNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRIYRNCRLS*
Ga0070663_1004332602	3300005455	Corn Rhizosphere	MMERIDNELECSARELLAYLDTESELEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070678_1003449622	3300005456	Miscanthus Rhizosphere	MNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRSAVFAKAARTLAPAQTQFPELFISK*
Ga0068867_1017440931	3300005459	Miscanthus Rhizosphere	GSAMMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070695_1009284492	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0070665_1009268373	3300005548	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0068864_1003661692	3300005618	Switchgrass Rhizosphere	LNEIDNELECRARELLAYLHADVEIEESLPFAVGFLIEKMRAAVFAKAARTLAPAHRCRLYRHSSRTA*
Ga0068861_1004867672	3300005719	Switchgrass Rhizosphere	MERIDNELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ*
Ga0068870_107001052	3300005840	Miscanthus Rhizosphere	VHNVDNELECRARELLAYLDTEPPVEEALPFAIAYQIEKTRAAVFAKATRSLTPAHRCRIYRNCRLS*
Ga0075419_103260051	3300006969	Populus Rhizosphere	MERIDNELECSARELLAYLDTESDIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0105245_117288832	3300009098	Miscanthus Rhizosphere	VNQIDNELECRARELLANLDTEPAIEESWPFAVSFQVKKFREALFAKTARTLVPAHRCRIYRHCR*
Ga0105245_127834131	3300009098	Miscanthus Rhizosphere	SAMMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG*
Ga0111538_118675132	3300009156	Populus Rhizosphere	MNKLDNHLECRDRELLAYLDTELAVEESLPFALGYLVKQMRAAVFAKTVRVLAPAHRCRIYGHWRHAAIRN*
Ga0105246_111907271	3300011119	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAIFAKAARTLEPAQRCRIYRHCRG*
Ga0157288_102427802	3300012901	Soil	ELECRARELLAYLDTEMAIEKSLPFAVGYLVEQMRAAIFEKKTRTLAPAHRCRIYGRCR*
Ga0157291_103084521	3300012902	Soil	NNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRAAVFAKAARTLAPAHRCRIYRNCGPYAK*
Ga0157298_103716622	3300012913	Soil	RELLAYLDTELAIEESLPFAVGFLVEKMRAAVFAKAARTLAPAHRCRIYRTCRPQQS*
Ga0157302_100667331	3300012915	Soil	RELLAYLDTESEIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0157310_102580372	3300012916	Soil	HPMNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRAAVFAKAARTLAPAHVLSGLDA*
Ga0157378_105644951	3300013297	Miscanthus Rhizosphere	KADADRRELLAYLDTELEVEESLPFAVRFAIERMRAAVFAKTVRTLAPAHRCRIYGRCR*
Ga0157378_110763291	3300013297	Miscanthus Rhizosphere	VNQIDNELECRARELLANLDTEPAIEESWPFAVSFQVKKFREALFAKTARTLVPAHRCRI
Ga0157378_124050012	3300013297	Miscanthus Rhizosphere	MNEIDNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRIYGRCR*
Ga0163162_113685131	3300013306	Switchgrass Rhizosphere	NELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0157375_113717281	3300013308	Miscanthus Rhizosphere	ERIDNELECSARELLAYLDTESELEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0157375_125945602	3300013308	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG*
Ga0157375_129097013	3300013308	Miscanthus Rhizosphere	DNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRIYRNCRLS*
Ga0157375_135026841	3300013308	Miscanthus Rhizosphere	ELLAYLHADVEIEESLPFAVGFLIEKMRAAVFAKAARTLAPAHRCRLYRHSSRTA*
Ga0132257_1043470352	3300015373	Arabidopsis Rhizosphere	RARELLAYLDTELAVEAALPFGVGFLVEQMREAVFAKKAQTFAPAHRCRIYRQCRRLPI*
Ga0163161_116205022	3300017792	Switchgrass Rhizosphere	MERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG
Ga0190266_100108273	3300017965	Soil	MMERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0190266_113808571	3300017965	Soil	MDTTDNELECRARELLAYLHADVEIEESLPFAVGFLIEKMRAAVFAKAARTLAPAHRCRLYRHSSRTA
Ga0184634_100484393	3300018031	Groundwater Sediment	MMERIDNELECSARELLAYLDTESEIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0184611_11685741	3300018067	Groundwater Sediment	MNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRAAVFAKAARTLAPAQTQFPELFISK
Ga0184624_100703492	3300018073	Groundwater Sediment	MNNVDNELECRVRELLAYLDTESAVEEASPFAVGFLVEKMRAAVFAKAARTLAPAQTQFPELFISK
Ga0184628_100435785	3300018083	Groundwater Sediment	MGSFFFNDNELECRARELLAYLDNEAEIERALPFPVGLIVKEMRAAVFAKAVRTLAPAHRCRIYRNCG
Ga0184628_100978442	3300018083	Groundwater Sediment	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0184628_101044332	3300018083	Groundwater Sediment	MDQLDNELECRARELLAYLDTELAVEEALPFAVGFLVEKMRAGVFAKATRTLAPAHRCWIYRNCRLS
Ga0184628_102660222	3300018083	Groundwater Sediment	MERIDNELECSARELLAYLDTESEIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0190274_102889473	3300018476	Soil	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0190274_108311442	3300018476	Soil	SAMMERIDNELECSARELLAYLDTESELEKSLPFIVNVFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0190274_131430831	3300018476	Soil	MIIDNELECRARELLAYLDTDLAIEESLPFAVRFLLEKMRAAVFVKATRTLAPAHRCRIYRNWPHKFCEIEG
Ga0193753_100929363	3300020034	Soil	MDQLNNELECRAREVLAYLDTEAAIEDSLPFAVSFMVARMRAAVFAKTARTLAPARRCRIYGRCRP
Ga0210380_100187893	3300021082	Groundwater Sediment	MDQIDNELECRARELLAYLDTELAIEESLPFAVGFLVEQMRAAVFAKAARSLAPVHRCRIYRNCRPQQA
Ga0210380_103686742	3300021082	Groundwater Sediment	VNVDSELEFRARELLAYLDTDLAVEESLPFTVGFLVEKKRSAVFARSACTIAASLRCRLYFPNFTFRIDKN
Ga0210380_104415731	3300021082	Groundwater Sediment	GRVVNNVDNELERRARELLAYLDTDLAVEESLPFAVGFLVENMRAAVFAKVARTLAPAHRCRIYRHCRP
Ga0210380_105171532	3300021082	Groundwater Sediment	ELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAVFAKAARTLEPGQRCRIYRTAADKLFCCE
Ga0222622_100550551	3300022756	Groundwater Sediment	MNSIDNELECRARELLAYLDTELAIEESLPFAIGFLVEKMRAAVFAKAARTLAPAHRCRIYRHCRQ
Ga0222622_103331112	3300022756	Groundwater Sediment	MNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRAAVFAKAARTLAPAQTQFP
Ga0207643_103361272	3300025908	Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0207643_109802322	3300025908	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRI
Ga0207649_106136941	3300025920	Corn Rhizosphere	MMERIDNELECSARELLAYLDTESEVEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0207681_100283488	3300025923	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ
Ga0207681_109772361	3300025923	Switchgrass Rhizosphere	MMDRIDNALECSARELLAYLDTESELEKSLPFIVNVFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0207650_100559632	3300025925	Switchgrass Rhizosphere	MGSFFFNDNELECRARELLAYPDNEAEIERALPFPVGLIVKEMRAAVFAKAVRTLAPAHRCRIYRNCG
Ga0207650_101881463	3300025925	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESELEKSLPFIVNVFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0207650_103175723	3300025925	Switchgrass Rhizosphere	LNEIDNELECRARELIAYHDTELTIEESVPFAVGFLVEKMRAAVFSKTARTLAPAHRCRIYRNCRLS
Ga0207659_103469441	3300025926	Miscanthus Rhizosphere	MNKLDNELECRARELLAYLDTELAVEESLPFALGFLVEQMRAAVFSKATRTLERAHRCRIYRQCRPWWH
Ga0207701_101723614	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VNVDNELECRARELLAYLDTDLAVEEASPFAVGFLVEKMRAATFAKAARTRAPAHRCRMYRHCRL
Ga0207701_101735302	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAIFAKAARTLEPAQRCRIYRHCRG
Ga0207686_102079722	3300025934	Miscanthus Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKDARTLEPAQRCRIYRHCRG
Ga0207704_103202673	3300025938	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0207704_114374351	3300025938	Miscanthus Rhizosphere	MERIDNELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFAHASDRKAQQ
Ga0207668_101163333	3300025972	Switchgrass Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKSLPFIVNIFVKKMRAAIFAKAARTLEPAQRCRIYRHCRG
Ga0207678_109002301	3300026067	Corn Rhizosphere	MMERIDNELECSARELLAYLDTESEIEKTLPFIVNVLVKRMRAAVFAKAARTLEPAQ
Ga0207708_103348492	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VNQINNELECRARELLAYLDTDLAVEESLPFAVGFLVEKMRAAVFAKAARTLAPAHVLSGLDA
Ga0207641_101693083	3300026088	Switchgrass Rhizosphere	MERIDNELECSARELLAYLDTESELEKSLPFIVNIFVKKMRAAVFAKAARTLEPAQRCRIYRH
Ga0207676_124024841	3300026095	Switchgrass Rhizosphere	MERIDNELECSARELLAYLDTESEIEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRSDAFA
Ga0207683_104537482	3300026121	Miscanthus Rhizosphere	MNNVDNELECRVRELLAYLDTESAVEEASPFTVGFLVEKMRSAVFAKAARTLAPAQTQFPELFISK
Ga0307497_100375002	3300031226	Soil	MMERIDNELECSARELLAYLDTESELEKNLPFIVNVLVKRMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0310886_102173013	3300031562	Soil	MERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG
Ga0310903_108250561	3300032000	Soil	SSIERVGAVFKWGGAMMERIDNELECSARELLAYLDTESEIEKSLPFIVNVLVKKMRAAVFAKAARTLEPAQRCRIYRHCRG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096725

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences