Basic Information | |
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Family ID | F096683 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 47 residues |
Representative Sequence | MSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKTMAQGVATHLFLNACGT |
Number of Associated Samples | 24 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 47.12 % |
% of genes near scaffold ends (potentially truncated) | 38.46 % |
% of genes from short scaffolds (< 2000 bps) | 50.00 % |
Associated GOLD sequencing projects | 17 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.39 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (63.462 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (80.769 % of family members) |
Environment Ontology (ENVO) | Unclassified (95.192 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (80.769 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 61.04% β-sheet: 0.00% Coil/Unstructured: 38.96% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.39 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 104 Family Scaffolds |
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PF13191 | AAA_16 | 3.85 |
PF00353 | HemolysinCabind | 2.88 |
PF00805 | Pentapeptide | 2.88 |
PF10544 | T5orf172 | 1.92 |
PF01734 | Patatin | 1.92 |
PF13304 | AAA_21 | 1.92 |
PF04326 | AlbA_2 | 1.92 |
PF10592 | AIPR | 1.92 |
PF12833 | HTH_18 | 1.92 |
PF00350 | Dynamin_N | 0.96 |
PF01844 | HNH | 0.96 |
PF01906 | YbjQ_1 | 0.96 |
PF01370 | Epimerase | 0.96 |
PF01510 | Amidase_2 | 0.96 |
PF02518 | HATPase_c | 0.96 |
PF13358 | DDE_3 | 0.96 |
PF14281 | PDDEXK_4 | 0.96 |
PF07592 | DDE_Tnp_ISAZ013 | 0.96 |
PF13386 | DsbD_2 | 0.96 |
PF00959 | Phage_lysozyme | 0.96 |
PF07082 | DUF1350 | 0.96 |
PF10107 | Endonuc_Holl | 0.96 |
PF05729 | NACHT | 0.96 |
PF05598 | DUF772 | 0.96 |
PF00873 | ACR_tran | 0.96 |
PF01555 | N6_N4_Mtase | 0.96 |
PF00497 | SBP_bac_3 | 0.96 |
COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
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COG1357 | Uncharacterized conserved protein YjbI, contains pentapeptide repeats | Function unknown [S] | 2.88 |
COG1752 | Predicted acylesterase/phospholipase RssA, containd patatin domain | General function prediction only [R] | 1.92 |
COG2865 | Predicted transcriptional regulator, contains HTH domain | Transcription [K] | 1.92 |
COG3621 | Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR | General function prediction only [R] | 1.92 |
COG4667 | Predicted phospholipase, patatin/cPLA2 family | Lipid transport and metabolism [I] | 1.92 |
COG0393 | Uncharacterized pentameric protein YbjQ, UPF0145 family | Function unknown [S] | 0.96 |
COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 0.96 |
COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 0.96 |
COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 0.96 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 63.46 % |
Unclassified | root | N/A | 36.54 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300007517|Ga0105045_10034524 | Not Available | 4604 | Open in IMG/M |
3300007517|Ga0105045_10050381 | All Organisms → cellular organisms → Bacteria | 3751 | Open in IMG/M |
3300007517|Ga0105045_10053286 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3636 | Open in IMG/M |
3300007517|Ga0105045_10079095 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2898 | Open in IMG/M |
3300007517|Ga0105045_10087630 | Not Available | 2728 | Open in IMG/M |
3300007517|Ga0105045_10094234 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2614 | Open in IMG/M |
3300007517|Ga0105045_10140191 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2053 | Open in IMG/M |
3300007517|Ga0105045_10368284 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1083 | Open in IMG/M |
3300007517|Ga0105045_10605455 | Not Available | 769 | Open in IMG/M |
3300007517|Ga0105045_10673962 | Not Available | 714 | Open in IMG/M |
3300007517|Ga0105045_10739620 | Not Available | 671 | Open in IMG/M |
3300007517|Ga0105045_10825167 | All Organisms → cellular organisms → Bacteria | 623 | Open in IMG/M |
3300007519|Ga0105055_11278455 | Not Available | 508 | Open in IMG/M |
3300007521|Ga0105044_10065235 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 4329 | Open in IMG/M |
3300007521|Ga0105044_10073882 | All Organisms → cellular organisms → Bacteria | 3992 | Open in IMG/M |
3300007521|Ga0105044_10087157 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae | 3576 | Open in IMG/M |
3300007521|Ga0105044_10257093 | Not Available | 1697 | Open in IMG/M |
3300007521|Ga0105044_10554284 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 977 | Open in IMG/M |
3300007521|Ga0105044_11026872 | Not Available | 627 | Open in IMG/M |
3300007521|Ga0105044_11073301 | Not Available | 608 | Open in IMG/M |
3300007521|Ga0105044_11109048 | Not Available | 594 | Open in IMG/M |
3300007521|Ga0105044_11401623 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chloroherpeton → Chloroherpeton thalassium → Chloroherpeton thalassium ATCC 35110 | 506 | Open in IMG/M |
3300007522|Ga0105053_11190522 | Not Available | 516 | Open in IMG/M |
3300007799|Ga0105049_10048981 | All Organisms → cellular organisms → Bacteria | 4355 | Open in IMG/M |
3300007799|Ga0105049_10049038 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 4352 | Open in IMG/M |
3300007799|Ga0105049_10178943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus | 1850 | Open in IMG/M |
3300007799|Ga0105049_10249901 | Not Available | 1473 | Open in IMG/M |
3300007799|Ga0105049_10322481 | Not Available | 1234 | Open in IMG/M |
3300007799|Ga0105049_10583573 | Not Available | 813 | Open in IMG/M |
3300007799|Ga0105049_10903555 | Not Available | 598 | Open in IMG/M |
3300007799|Ga0105049_11151068 | Not Available | 507 | Open in IMG/M |
3300009032|Ga0105048_10106533 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3682 | Open in IMG/M |
3300009032|Ga0105048_10117364 | All Organisms → cellular organisms → Bacteria | 3452 | Open in IMG/M |
3300009032|Ga0105048_10132969 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3176 | Open in IMG/M |
3300009032|Ga0105048_10172903 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2654 | Open in IMG/M |
3300009032|Ga0105048_10287585 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1849 | Open in IMG/M |
3300009083|Ga0105047_10100811 | All Organisms → cellular organisms → Bacteria | 3642 | Open in IMG/M |
3300009083|Ga0105047_10242257 | All Organisms → cellular organisms → Bacteria | 1967 | Open in IMG/M |
3300009083|Ga0105047_10287281 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1738 | Open in IMG/M |
3300009083|Ga0105047_10515599 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1124 | Open in IMG/M |
3300009083|Ga0105047_10706669 | All Organisms → cellular organisms → Bacteria | 883 | Open in IMG/M |
3300009083|Ga0105047_11139681 | All Organisms → cellular organisms → Bacteria | 615 | Open in IMG/M |
3300009084|Ga0105046_10075135 | All Organisms → cellular organisms → Bacteria | 4479 | Open in IMG/M |
3300009084|Ga0105046_10093497 | All Organisms → cellular organisms → Bacteria | 3880 | Open in IMG/M |
3300009084|Ga0105046_10122205 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3238 | Open in IMG/M |
3300009084|Ga0105046_10130536 | Not Available | 3094 | Open in IMG/M |
3300009084|Ga0105046_10146669 | Not Available | 2853 | Open in IMG/M |
3300009084|Ga0105046_10224138 | Not Available | 2121 | Open in IMG/M |
3300009084|Ga0105046_10297350 | Not Available | 1727 | Open in IMG/M |
3300009084|Ga0105046_10388736 | Not Available | 1416 | Open in IMG/M |
3300009084|Ga0105046_11394962 | Not Available | 534 | Open in IMG/M |
3300012044|Ga0136636_10074205 | All Organisms → cellular organisms → Bacteria | 1655 | Open in IMG/M |
3300012044|Ga0136636_10246800 | Not Available | 790 | Open in IMG/M |
3300012044|Ga0136636_10367456 | Not Available | 617 | Open in IMG/M |
3300015360|Ga0163144_10153700 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 3384 | Open in IMG/M |
3300015360|Ga0163144_10217655 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2610 | Open in IMG/M |
3300015360|Ga0163144_10252244 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales | 2336 | Open in IMG/M |
3300015360|Ga0163144_10362329 | Not Available | 1771 | Open in IMG/M |
3300020057|Ga0163151_10158886 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1380 | Open in IMG/M |
3300020180|Ga0163155_10028255 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 4196 | Open in IMG/M |
3300020180|Ga0163155_10053710 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2677 | Open in IMG/M |
3300020192|Ga0163147_10298817 | Not Available | 858 | Open in IMG/M |
3300020201|Ga0163154_10004440 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 18410 | Open in IMG/M |
3300020201|Ga0163154_10005982 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales | 15128 | Open in IMG/M |
3300020203|Ga0163148_10051089 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2941 | Open in IMG/M |
3300020219|Ga0163146_10434663 | Not Available | 712 | Open in IMG/M |
3300020596|Ga0163149_10020157 | All Organisms → cellular organisms → Bacteria | 5801 | Open in IMG/M |
3300020596|Ga0163149_10190150 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1294 | Open in IMG/M |
3300022222|Ga0226658_10040502 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 2193 | Open in IMG/M |
3300022222|Ga0226658_10061305 | All Organisms → cellular organisms → Bacteria | 1754 | Open in IMG/M |
3300022222|Ga0226658_10092494 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1402 | Open in IMG/M |
3300027823|Ga0209490_10023948 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 5052 | Open in IMG/M |
3300027823|Ga0209490_10028927 | All Organisms → cellular organisms → Bacteria | 4534 | Open in IMG/M |
3300027823|Ga0209490_10058995 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus gilardii | 2949 | Open in IMG/M |
3300027823|Ga0209490_10098292 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → Oscillatoria nigro-viridis | 2136 | Open in IMG/M |
3300027823|Ga0209490_10243068 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1151 | Open in IMG/M |
3300027823|Ga0209490_10584339 | Not Available | 590 | Open in IMG/M |
3300027823|Ga0209490_10589391 | Not Available | 586 | Open in IMG/M |
3300027823|Ga0209490_10648045 | Not Available | 543 | Open in IMG/M |
3300027850|Ga0209591_10054659 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 3766 | Open in IMG/M |
3300027850|Ga0209591_10109637 | All Organisms → cellular organisms → Bacteria | 2409 | Open in IMG/M |
3300027850|Ga0209591_10184579 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae | 1692 | Open in IMG/M |
3300027850|Ga0209591_10289630 | Not Available | 1221 | Open in IMG/M |
3300027850|Ga0209591_10693955 | Not Available | 612 | Open in IMG/M |
3300027878|Ga0209181_10044606 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 4742 | Open in IMG/M |
3300027878|Ga0209181_10081747 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. PCC 6312 | 3226 | Open in IMG/M |
3300027878|Ga0209181_10116876 | All Organisms → cellular organisms → Bacteria | 2564 | Open in IMG/M |
3300027878|Ga0209181_10131906 | Not Available | 2368 | Open in IMG/M |
3300027878|Ga0209181_10848140 | Not Available | 620 | Open in IMG/M |
3300032420|Ga0335397_10062348 | All Organisms → cellular organisms → Bacteria | 4018 | Open in IMG/M |
3300032420|Ga0335397_10073960 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3615 | Open in IMG/M |
3300032420|Ga0335397_10081216 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3413 | Open in IMG/M |
3300032420|Ga0335397_10163707 | Not Available | 2171 | Open in IMG/M |
3300032420|Ga0335397_10813241 | Not Available | 661 | Open in IMG/M |
3300032420|Ga0335397_10875659 | Not Available | 622 | Open in IMG/M |
3300032420|Ga0335397_10986573 | Not Available | 564 | Open in IMG/M |
3300032431|Ga0335395_10055746 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae | 2758 | Open in IMG/M |
3300032431|Ga0335395_10316270 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1072 | Open in IMG/M |
3300032456|Ga0335394_10000715 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 36215 | Open in IMG/M |
3300032456|Ga0335394_10096592 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 3077 | Open in IMG/M |
3300032456|Ga0335394_10111760 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales | 2807 | Open in IMG/M |
3300032456|Ga0335394_10132380 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus | 2525 | Open in IMG/M |
3300032456|Ga0335394_10440661 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1093 | Open in IMG/M |
3300032456|Ga0335394_11017570 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chloroherpeton → Chloroherpeton thalassium → Chloroherpeton thalassium ATCC 35110 | 555 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Freshwater | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater | 80.77% |
Freshwater Microbial Mat | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat | 16.35% |
Polar Desert Sand | Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand | 2.88% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300007517 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-02 (megahit assembly) | Environmental | Open in IMG/M |
3300007519 | Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 | Environmental | Open in IMG/M |
3300007521 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 | Environmental | Open in IMG/M |
3300007522 | Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 | Environmental | Open in IMG/M |
3300007799 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 | Environmental | Open in IMG/M |
3300009032 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 | Environmental | Open in IMG/M |
3300009083 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly) | Environmental | Open in IMG/M |
3300009084 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly) | Environmental | Open in IMG/M |
3300012044 | Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ852 (21.06) | Environmental | Open in IMG/M |
3300015360 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 | Environmental | Open in IMG/M |
3300020057 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2 | Environmental | Open in IMG/M |
3300020180 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1 | Environmental | Open in IMG/M |
3300020192 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1 | Environmental | Open in IMG/M |
3300020201 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP9.P1 | Environmental | Open in IMG/M |
3300020203 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2 | Environmental | Open in IMG/M |
3300020219 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP7.G1 | Environmental | Open in IMG/M |
3300020596 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.G1 | Environmental | Open in IMG/M |
3300022222 | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2) | Environmental | Open in IMG/M |
3300027823 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes) | Environmental | Open in IMG/M |
3300027850 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes) | Environmental | Open in IMG/M |
3300027878 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes) | Environmental | Open in IMG/M |
3300032420 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly) | Environmental | Open in IMG/M |
3300032431 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-02 (spades assembly) | Environmental | Open in IMG/M |
3300032456 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0105045_100345242 | 3300007517 | Freshwater | MSADHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT* |
Ga0105045_100503811 | 3300007517 | Freshwater | SAIASATSVEDMSVDHRRFNTFMTQQFLDGADVIAVFEQVSGKPVAQGVATHSF* |
Ga0105045_100532866 | 3300007517 | Freshwater | MTQQFLDGADVIAIFGQVSGKTVAQGVATYSFLNAYGT* |
Ga0105045_100790956 | 3300007517 | Freshwater | MTQQFLDSTNVIAIFEQVGGETVAAGVATHSFLNACGA* |
Ga0105045_100876304 | 3300007517 | Freshwater | FDISMTQQFLDGADVIAVFEQVSGKTMAQGVATHSFLNACGV* |
Ga0105045_100942341 | 3300007517 | Freshwater | MNVDHRRFNTFMTQQFLDGANFIAIFEQVSGKTVAQGVATHSWLNACAA* |
Ga0105045_101401912 | 3300007517 | Freshwater | MTQQFWDGANVIAIFEQVSGKTVAAGVATYSCLNACGA* |
Ga0105045_103682841 | 3300007517 | Freshwater | SAIASATSVEDMSVDHRRSNTFMTQQFLDSADVIAVFGQVSGKTVVQGVATHSCLNACGT |
Ga0105045_106054551 | 3300007517 | Freshwater | EDMSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGVPTHSCLNACGT* |
Ga0105045_106739621 | 3300007517 | Freshwater | MSADHRCFNTFVSQQFLDGANVIAIFEQVSGKTVAQGVATHSCF* |
Ga0105045_107396202 | 3300007517 | Freshwater | MSVDRRRFHTFMTQQFLDGADVIAIFEQASGKTVAQGVTTHSFLNACGT* |
Ga0105045_108251671 | 3300007517 | Freshwater | CRFDISMTQQFLDGADVIAVFEQVSGKTMAQGVATHPFLNACGA* |
Ga0105055_112784552 | 3300007519 | Freshwater | MSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGVATHSCLNAYGTW |
Ga0105044_100652353 | 3300007521 | Freshwater | ATSVEDMSVDHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT* |
Ga0105044_100738824 | 3300007521 | Freshwater | MSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKIVAQGVATRPCLNACGT* |
Ga0105044_100871572 | 3300007521 | Freshwater | MNVDHRRFNTFMTQQFLDGANAIAVFEQVSGETVAQGVATHSCLNACGA* |
Ga0105044_102570933 | 3300007521 | Freshwater | SATSAEDMSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGVPTHSCLNACGI* |
Ga0105044_105542842 | 3300007521 | Freshwater | EDMSVDHRRSNTFMTQQFLDSADVTAVFGQVSGKTVVQGVATHSCLNACGT* |
Ga0105044_110268722 | 3300007521 | Freshwater | MVVFTPFMTQQFLDGADVIAVFGQVSGKTVAQGVTTHSCLNACGA* |
Ga0105044_110733011 | 3300007521 | Freshwater | MIADHCRFDISMTQQFLDGADVIAVFEQVSGKTVTQGVATHSFLNACGA* |
Ga0105044_111090482 | 3300007521 | Freshwater | SLMTQQFLDGADVIAIFEQVSGKTMTQGVATHSCLNACGA* |
Ga0105044_114016231 | 3300007521 | Freshwater | MTQQFLDGANVIAVFGQVSGKTVAQGVATHWCLNACGA* |
Ga0105053_111905221 | 3300007522 | Freshwater | MSVDCRRFHTFMTQQFLDGADVIAVFEQVSGKTVAQGVATHWCLNTCGT* |
Ga0105049_100489811 | 3300007799 | Freshwater | MSADPRCFNTFMSQQFLDGANVIAVFEQVGGKTVAQGVATHSCLNACGA* |
Ga0105049_100490381 | 3300007799 | Freshwater | MSVDHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT* |
Ga0105049_101789432 | 3300007799 | Freshwater | MNVDHRRFNTFMTQQFLDGANAIAVFERVSDETVVRGVATHSLLNAYGA* |
Ga0105049_102499011 | 3300007799 | Freshwater | KAFMTQQFLDGADVVAVFGQVSGKTVAQGVATHSCLDACGA* |
Ga0105049_103224812 | 3300007799 | Freshwater | MTQQFLDGTDVIAVFEQVSGKTVAQGVATHSFLNACGA* |
Ga0105049_105835732 | 3300007799 | Freshwater | MGVDHRRFPTFMTQQFLDGADVIAVFGQVSGETVAQGVATHWCLNTCGT* |
Ga0105049_109035552 | 3300007799 | Freshwater | FTSLMTQQFLDGADVIAIFEQVSGKTMTQGVATHSCLNACGA* |
Ga0105049_111510681 | 3300007799 | Freshwater | SVEDMIADHRRFNTFITQQFLDGAGVIAIFEQVSGKTMTQGVATHSCLNACVA* |
Ga0105048_101065332 | 3300009032 | Freshwater | VRENSGFQVRRGLGIDHRRFNTFMTQQFLDGADVIAIFGQVSGKTVAQGVATYSFLNAYGT* |
Ga0105048_101173641 | 3300009032 | Freshwater | VFTSLMTQQFLDSAGVIAIFEQVSGKTVAQGVATHSF* |
Ga0105048_101329691 | 3300009032 | Freshwater | QQFLDSADVIAVFGQVSGKTVVQGVATHSCLNACGT* |
Ga0105048_101729032 | 3300009032 | Freshwater | MAVFTPFMTQQFLDGADVIAVFGQVSGKTVAQGVTTHSCLNACGA* |
Ga0105048_102875851 | 3300009032 | Freshwater | SVEDMSVDRRRFHTFMTQQFLDGADVIAIFEQASGKTVAQGLATHSFLNACGT* |
Ga0105047_101008111 | 3300009083 | Freshwater | LGIEWSAIASATSVEDMSVDYRRFNTFMTQQFLDGADVIAVFEQVSGKPVAQGVATHSF* |
Ga0105047_102422571 | 3300009083 | Freshwater | TSVEDMSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKTMAQGVATHLFLNACGT* |
Ga0105047_102872813 | 3300009083 | Freshwater | GIDHRRFNTFMTQQFLDGADVIAIFGQVSGKTVAQGVATYSFLNAYGT* |
Ga0105047_105155992 | 3300009083 | Freshwater | MTQQYLDGTNVIAAFEQVSGKAVAQGVATHSFLNACGT* |
Ga0105047_107066692 | 3300009083 | Freshwater | MNVDHRRFNTFMTQQFLDGANATAVFERVSDETVVRGVATHSLLNACGA* |
Ga0105047_111396812 | 3300009083 | Freshwater | FDISMTQQFLDGADVIAVFEQVSGKTMAQGVATHPFLNACGA* |
Ga0105046_100751351 | 3300009084 | Freshwater | ANTPATSVEDMSADHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT* |
Ga0105046_100934974 | 3300009084 | Freshwater | MSVDHRRFNTFMTQQFLDGADVIAVFEQVSGKPVAQGVATHSF* |
Ga0105046_101222052 | 3300009084 | Freshwater | VDHRRSNTFMTQQFLDSADVIAVFGQVSGKTVVQGVATHSCLNACGT* |
Ga0105046_101305363 | 3300009084 | Freshwater | MSADHRCFNTFMSQQFLDGANVIAVFEQVGGKTVAQGVATHSCLNACGT* |
Ga0105046_101466694 | 3300009084 | Freshwater | MGVDHCRFDISMTQQFLDGADVIAVFEQVSGKTMAQGVATHSFLNACGV* |
Ga0105046_102241383 | 3300009084 | Freshwater | MSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKTMAQGVATHLFLNACGT* |
Ga0105046_102973503 | 3300009084 | Freshwater | MSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGVPTHSYLNACGT* |
Ga0105046_103887361 | 3300009084 | Freshwater | TSVKGMSADHRCFNTFVSQQFLDGANVIAIFEQVSGKTVAQGVATHSCF* |
Ga0105046_113949621 | 3300009084 | Freshwater | GSFDISMTQKLLDGADVIAIFEQVSGKTVAQGVATHPFLNACGA* |
Ga0136636_100742053 | 3300012044 | Polar Desert Sand | MGVDYGSFDISMTQKLLDGADVIAIFEQVSGKTVAQGVATHPFLNACGA* |
Ga0136636_102468002 | 3300012044 | Polar Desert Sand | MNVDHRRFNTFMTQQFLDGTNFIAIFEQVSGKTVAQGVATHSWLNACAA* |
Ga0136636_103674562 | 3300012044 | Polar Desert Sand | MGVDHGSFDISMTQKLLDGAGIIAIFEQMSGKTVAQGVATHPFLNACGA* |
Ga0163144_101537004 | 3300015360 | Freshwater Microbial Mat | FMTQQFLNGADVIAVFEQVSGKTVAAGVATHSYLNACGA* |
Ga0163144_102176551 | 3300015360 | Freshwater Microbial Mat | MGGNHHRFHTFMTQQFLDGADVIAVFEQVSGETVAAGVATHSCLNACGA* |
Ga0163144_102522442 | 3300015360 | Freshwater Microbial Mat | AIASATSIENMSVYHRRFNTFMTQQFLDGADVIAVFEQVSGKIVAQGVATRPCLNACGT* |
Ga0163144_103623291 | 3300015360 | Freshwater Microbial Mat | MSVEHRRFNTFMTQQVLDGADVIDIFEQVSGQTVAQGVATHSFLNACGT* |
Ga0163151_101588863 | 3300020057 | Freshwater Microbial Mat | MIADHCRFDISMTQQFLDGADVIAVFEQVSGKTVTQGVATHSFLNACGA |
Ga0163155_100282557 | 3300020180 | Freshwater Microbial Mat | MTQQFLDGADVIAIFGQVSGKTVAQGVAAYSFLNAYGT |
Ga0163155_100537101 | 3300020180 | Freshwater Microbial Mat | MTQQFWDGANVIAIFEQVSGKTVAAGVATYSCLNACGA |
Ga0163147_102988172 | 3300020192 | Freshwater Microbial Mat | MGVDHRRFPTFMTQQFLDGADVIAVFGQVSGKTVAQGVATHWCLNTCGT |
Ga0163154_100044409 | 3300020201 | Freshwater Microbial Mat | MTQQVLNGTNVIAIFEQVGGETVAAGVATHSFLNACDA |
Ga0163154_100059826 | 3300020201 | Freshwater Microbial Mat | LATSIKDMGVDHRRFPTFMTQQFLDGADVIAVFGQVSGKTVAQGVATHWCLNTCGT |
Ga0163148_100510893 | 3300020203 | Freshwater Microbial Mat | MSVEHRRFNTFMTQQVLDGADVIDIFEQVSGQTVAQGVATHSFLNACGT |
Ga0163146_104346632 | 3300020219 | Freshwater Microbial Mat | MGVDHRRFPTFMTQQFLDGADVIAVFEQVSGKTVAQGVATHWCLNTCGT |
Ga0163149_100201571 | 3300020596 | Freshwater Microbial Mat | TTFMTQQFLDGADVIAVFGQVSGKTVAQGVATHWCLNTCGT |
Ga0163149_101901501 | 3300020596 | Freshwater Microbial Mat | LATSIKDMGVDHRRFPTFMTQQFLDGADVIAVFGQVSGKTVAQGV |
Ga0226658_100405023 | 3300022222 | Freshwater Microbial Mat | MTQQFLDGADVIAIFGQVSGKTVAQGVATYSFLNAYGT |
Ga0226658_100613051 | 3300022222 | Freshwater Microbial Mat | MGVDYGSFDISMTQKLLDGADIIAIFEQVSGKTVAQGVATHPFLNACGA |
Ga0226658_100924942 | 3300022222 | Freshwater Microbial Mat | MGGNHHRFHTFMTQQFLDGADVIAVFEQVSGETVAAGVATHSCLNACGA |
Ga0209490_100239485 | 3300027823 | Freshwater | MSVDHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT |
Ga0209490_100289275 | 3300027823 | Freshwater | MSADPRCFNTFMSQQFLDGANVIAVFEQVGGKTVAQGVATHSCLNACGA |
Ga0209490_100589951 | 3300027823 | Freshwater | MNVDHRRFNTFMTQQFLDGANAIAVFERVSDETVVRGVATHSLLNACGA |
Ga0209490_100982923 | 3300027823 | Freshwater | MNVDHRRFNTFMTQQFLDGANFIAIFEQVSGKTVAQGVATHSWLNACAA |
Ga0209490_102430681 | 3300027823 | Freshwater | MTQQFLDSTNVIAIFEQVGGETVAAGVATHSFLNACGA |
Ga0209490_105843391 | 3300027823 | Freshwater | DMSVEHRRFNTFMTQQVLDGADVIDIFEQVSGQTVAQGVATHSFLNACGT |
Ga0209490_105893911 | 3300027823 | Freshwater | FTSLMTQQFLDGADVIAIFEQVSGKTMTQGVATHSCLNACGA |
Ga0209490_106480451 | 3300027823 | Freshwater | MVVFTPFMTQQFLDGADVIAVFGQVSGKTVAQGVTTHSCLNACGA |
Ga0209591_100546595 | 3300027850 | Freshwater | ATSAEDMSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGVPTHSCLNACGT |
Ga0209591_101096371 | 3300027850 | Freshwater | MSVDRRRFHTFMTQQFLDGADVIAIFEQASGKTVAQGVTTHSFLNACGT |
Ga0209591_101845792 | 3300027850 | Freshwater | MTQQFLDGADVIAIFEQVSGKTVAQGAATHSCLNACGA |
Ga0209591_102896302 | 3300027850 | Freshwater | MSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKIVAQGVATRPCLNACGT |
Ga0209591_106939551 | 3300027850 | Freshwater | MNVDHRRFNTFMTQQFLDGANAIAVFEQVSGETVAQGVATHSCLNACGA |
Ga0209181_100446061 | 3300027878 | Freshwater | MVVFTSFMTQQFLDGADVIAVFGQVSGKTVAQGMATHSCLNACGT |
Ga0209181_100817474 | 3300027878 | Freshwater | VFTSFMTQQFLDGADVIAVFGQVSGKTVAQGVATHSCLNACGA |
Ga0209181_101168761 | 3300027878 | Freshwater | MGVDYGSFDISMTQKLLDGADVIAIFEQVSGKTVAQGVATHPFLNACGA |
Ga0209181_101319062 | 3300027878 | Freshwater | MSADHRCFNTFMSQQFLDGANVIAVFEQVGGKTVAQGVATHSCLNACGT |
Ga0209181_108481401 | 3300027878 | Freshwater | MGVDHGDFDISMTQKLLDGADVIAIFEQMSGKTVAQGVATQPFLNACGA |
Ga0335397_100623481 | 3300032420 | Freshwater | DMSVDYRRFNTFMTQQFLDGADVIAVFEQVSGKPVAQGVATHSF |
Ga0335397_100739602 | 3300032420 | Freshwater | MAVFTPFMTQQFLDGADVIAVFGQVSGKTVAQGVTTHSCLNACGA |
Ga0335397_100812161 | 3300032420 | Freshwater | GIDHRRFNTFMTQQFLDGADVIAIFGQVSGKTVAQGVATYSFLNAYGT |
Ga0335397_101637072 | 3300032420 | Freshwater | MSVDRRRFNTFMTQQFLDGADVIAVFEQVSGKTMAQGVATHLFLNACGT |
Ga0335397_108132413 | 3300032420 | Freshwater | MSADHRRFNTFMNQQFLDSADVIAVFGQVSGKTVAQGVTTHSFLNACGT |
Ga0335397_108756592 | 3300032420 | Freshwater | MSVDRRRFHTFMTQQFLDGADVIAIFEQASGKTVAQGLATHSFLNACGT |
Ga0335397_109865731 | 3300032420 | Freshwater | ASATSVEDMGVDYGSFDISMTQKLLDGADVIAVFEQMSGKTVAQGVATHPFLNACGA |
Ga0335395_100557465 | 3300032431 | Freshwater | QFLDSADVIAVFEQVSDKTVAQAMATHSCLNAYGT |
Ga0335395_103162701 | 3300032431 | Freshwater | MGVDHGDFDISMTQQFLNGADTIAVFEQVSGKTVAQSVATHSFLNACGA |
Ga0335394_1000071520 | 3300032456 | Freshwater | MTQQFLDGTDVIAVFEQVSGKTVAQGVATHSFLNACGA |
Ga0335394_100965921 | 3300032456 | Freshwater | VDHRRSNTFMTQQFLDSADVIAVFGQVSGKTVVQGVATHSCLNACGT |
Ga0335394_101117601 | 3300032456 | Freshwater | TSVEDMSVDRRRFHTFMTQQFLDGADVIAIFEQASGKTVAQGVTTHSFLNACGT |
Ga0335394_101323802 | 3300032456 | Freshwater | MSVDHRRFDISMTQQFLDGADVIAVFEQVSGKTVAQGGPTHPCLNACGT |
Ga0335394_104406612 | 3300032456 | Freshwater | FMTQQYLDGTNVIAAFEQVSGKAVAQGVATHSFLNACGT |
Ga0335394_110175701 | 3300032456 | Freshwater | MTQQFLDGADVIAVFGQVSGKTVAQGVATHSCLNA |
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