Metagenome / Metatranscriptome Family F096619

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096619
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	89 residues
Representative Sequence	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Number of Associated Samples	61
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	77.88 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (59.615 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (47.115 % of family members)
Environment Ontology (ENVO)	Unclassified (87.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (93.269 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102. 1JGI25908J49247_101394401 2Ga0070374_105189212 3Ga0049081_101688042 4Ga0049080_100242046 5Ga0049080_100260265 6Ga0049080_102710001 7Ga0049082_100311842 8Ga0049082_101973642 9Ga0049082_102802162 10Ga0105747_10666092 11Ga0114973_1000081434 12Ga0114973_104651071 13Ga0114973_106488102 14Ga0114980_103346233 15Ga0114968_100198224 16Ga0114968_102146603 17Ga0114977_100483074 18Ga0114977_101282312 19Ga0114966_107053162 20Ga0114970_106367371 21Ga0114975_101159931 22Ga0114969_100905712 23Ga0114974_104006982 24Ga0114976_103996112 25Ga0114972_102677201 26Ga0114967_104640882 27Ga0133913_104637851 28Ga0133913_106449052 29Ga0133913_111286962 30Ga0133913_116770551 31Ga0139557_10051381 32Ga0153799_10056086 33Ga0153801_10105151 34Ga0170791_132983791 35Ga0170791_158742391 36Ga0177922_103206152 37Ga0177922_107479182 38Ga0181364_10094122 39Ga0181347_10370551 40Ga0181347_11027912 41Ga0181362_10210351 42Ga0181362_10625691 43Ga0181362_10654932 44Ga0181362_10692113 45Ga0181365_11188132 46Ga0181365_11402272 47Ga0181356_10559711 48Ga0181356_11672441 49Ga0181356_11702012 50Ga0181356_11857273 51Ga0181356_12380522 52Ga0181358_11685601 53Ga0181358_12188542 54Ga0181358_12894541 55Ga0181357_11023751 56Ga0181357_11788942 57Ga0181357_12401911 58Ga0181349_11229133 59Ga0181349_11265532 60Ga0181349_12194943 61Ga0181349_12872001 62Ga0181346_11818032 63Ga0181348_10451495 64Ga0181348_11909881 65Ga0181348_11965742 66Ga0181355_10480584 67Ga0181359_10152671 68Ga0181359_10182513 69Ga0181359_10603122 70Ga0181359_11042243 71Ga0181359_11271411 72Ga0181359_11445222 73Ga0181359_12604542 74Ga0222712_101896621 75Ga0181354_12441842 76Ga0181351_10796654 77Ga0181351_10932993 78Ga0181351_11317613 79Ga0214917_102578512 80Ga0255236_10035822 81Ga0208966_11577561 82Ga0208974_10218391 83Ga0208974_10345192 84Ga0208975_11656452 85Ga0209553_10723191 86Ga0209553_12788991 87Ga0209297_11998462 88Ga0209087_12108762 89Ga0209190_10655482 90Ga0209596_100017268 91Ga0209444_100262846 92Ga0209296_100084143 93Ga0209296_10374613 94Ga0209768_100555915 95Ga0209768_103012372 96Ga0209354_100974822 97Ga0209550_100328312 98Ga0209400_10005061 99Ga0209401_100006817 100Ga0315905_101481724 101Ga0335019_0255700_108_386 102Ga0335027_0709299_1_246 103Ga0335029_0015361_142_420 104Ga0335031_0415603_197_475
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102. 1JGI25908J49247_101394401 2Ga0114975_101159931 3Ga0170791_158742391 4Ga0181357_11023751 5Ga0209768_100555915
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102. 1JGI25908J49247_101394401 2Ga0114975_101159931 3Ga0170791_158742391 4Ga0181357_11023751 5Ga0209768_100555915
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.83% Coil/Unstructured: 52.17%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03864	Phage_cap_E	12.50
PF00436	SSB	1.92
PF05257	CHAP	0.96
PF14550	Peptidase_S78_2	0.96
PF02675	AdoMet_dc	0.96
PF13384	HTH_23	0.96

Showing 1 to 6 of 6 entries

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COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.92
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.92
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.00 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.88 %
Unclassified	root	N/A	25.00 %
Viruses	superkingdom	All Organisms → Viruses	72.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	59.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	59.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	59.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	59.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	21.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.88 %
Freshwater phage uvFW-CGR-AMD-COM-C203	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C203	21.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	25.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.96 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10139440	Not Available	569	Open in IMG/M
3300005517\|Ga0070374_10518921	Not Available	594	Open in IMG/M
3300005581\|Ga0049081_10168804	Not Available	795	Open in IMG/M
3300005582\|Ga0049080_10024204	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300005582\|Ga0049080_10026026	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300005582\|Ga0049080_10271000	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	551	Open in IMG/M
3300005584\|Ga0049082_10031184	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1863	Open in IMG/M
3300005584\|Ga0049082_10197364	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	690	Open in IMG/M
3300005584\|Ga0049082_10280216	Not Available	559	Open in IMG/M
3300007974\|Ga0105747_1066609	Not Available	1085	Open in IMG/M

Showing 1 to 10 of 104 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.08%
Marine	Environmental → Aquatic → Marine	1.92%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.96%
Lake	Environmental → Aquatic → Freshwater → Lake	37.50%
Lentic	Environmental → Aquatic → Freshwater → Lentic	57.69%
River	Environmental → Aquatic → Freshwater → River	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	57.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.96%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.81%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.96%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	47.12%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	26.92%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.58%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 61 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_101394401	3300003277	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0070374_105189212	3300005517	Freshwater Lake	MAIAHAIVSVGTSATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0049081_101688042	3300005581	Freshwater Lentic	MAIAHAIVSVGTTATLLTVATEGGGKDGSTILVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0049080_100242046	3300005582	Freshwater Lentic	SVGTTATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV*
Ga0049080_100260265	3300005582	Freshwater Lentic	MAIAHAIVSVGTTATLLTVATEGGGKDGSTILVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV*
Ga0049080_102710001	3300005582	Freshwater Lentic	TTATLLTVAALGGGKDGSTIFVQNPTGGQAVFLGGEGVTSSAYGYKLAIDSNIRIDLNQGEALYAVVAATTQSVAVLRQGV*
Ga0049082_100311842	3300005584	Freshwater Lentic	MAIAHGIVSVGTSATLLTVALEGGGKDGSTIFIQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNIRIDLNQGEALYAVVASSTQSVAVLRQGV*
Ga0049082_101973642	3300005584	Freshwater Lentic	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0049082_102802162	3300005584	Freshwater Lentic	MAINHALVSVTTTATLLTVAASGGGKDGSTILVQNPSGGQAVFLGGTGVTSASYGYKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV*
Ga0105747_10666092	3300007974	Estuary Water	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFIGGLGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0114973_1000081434	3300009068	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPAGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV*
Ga0114973_104651071	3300009068	Freshwater Lake	MAINHALVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSAYGFILAAGSNIAIELNQDEALYGAVASSTQSVAVLRQGV*
Ga0114973_106488102	3300009068	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSAYGFILAAGTNIAIELNQDEALYGAVASSTQSVAVLRQGV*
Ga0114980_103346233	3300009152	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSSYGYILAAGSNISIELNQDEALYGAVASSTQSVAVLRQGV*
Ga0114968_100198224	3300009155	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVAVYLGGAGVTSSAYGFILAAGTNIAIELNQDEALYGAVASSTQSVAVLRQGV*
Ga0114968_102146603	3300009155	Freshwater Lake	MAINHALVTVGTSATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSDIAIELNQDEALYGVVASTTQSVAVLRQGV*
Ga0114977_100483074	3300009158	Freshwater Lake	MAINHGIVSVGTTATLLTVAALGGGKDGSTIFIQNPTGGQAVYLGGAGVTTSSYGYILAINSNIRIDLNQDEALYGVVASTTQSVAVLRQGV*
Ga0114977_101282312	3300009158	Freshwater Lake	MAINHALVSVGTSATLLTVAASGGGKDGSTILIQNPTGGVSVYLGGAGVTSSVYGFILAAGSNISIELNQDEAVYGVVASSTQSVAVLRQGV*
Ga0114966_107053162	3300009161	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPAGGQAVFLGGAGVTSASYGYKLAIDSDIAIELNQDEALYGVVASTTQSVAVLRQGV*
Ga0114970_106367371	3300009163	Freshwater Lake	INHALVSVGTTATLLTVAASGGGKDGSTILVQNPSGGQAVYLGGAGVTVASYGFILAVGTSISIELNQDEALYGVVTATTQSVAVLRQGV*
Ga0114975_101159931	3300009164	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSAYGFILAAGTNIAIELNQDEALYGA
Ga0114969_100905712	3300009181	Freshwater Lake	MAINHALVSVGTTATLLTLAAAGGGKDGSTICIQNPSGGQAVYLGGAGVTVASYGFILAVGTSISIELNQDEALYGVVTATTQSVAVLRQGV*
Ga0114974_104006982	3300009183	Freshwater Lake	MAINHAIVSVGATATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTTSSYGFILAVNSNISIELNQDEALYGVVASSTQSVAVLRQGV*
Ga0114976_103996112	3300009184	Freshwater Lake	MAINHAIVSVGSTATLLTVAALGGGKDGSTILVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV*
Ga0114972_102677201	3300009187	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPAGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVA
Ga0114967_104640882	3300010160	Freshwater Lake	VGTSATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSDIAIELNQDEALYGVVASTTQSVAVLRQGV*
Ga0133913_104637851	3300010885	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTICVQNPSGGQAVYLGGAGVTVASYGFILAVGTSISIELNQDEALYGVVTATTQSVAVLRQGV*
Ga0133913_106449052	3300010885	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPAGGQAVFLGGAGVTSASYGFKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV*
Ga0133913_111286962	3300010885	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTTSSYGYKLAIDSNISIELNQDEAVYGVVASSTQAVAVLRQGV*
Ga0133913_116770551	3300010885	Freshwater Lake	QMAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSSYGYILAAGSNISIELNQDEALYGAVASSTQSVAVLRQGV*
Ga0139557_10051381	3300011010	Freshwater	MAIRHAIVSVGTSATLLTVALEGGGKDGSTILVQNPTGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0153799_10056086	3300012012	Freshwater	MAINHAIVSVGTTATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV*
Ga0153801_10105151	3300012017	Freshwater	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPTGGQAVFIGGAGVTTSSYGYKLAIDSNISIELNQDEAVYGVVAS
Ga0170791_132983791	3300013295	Freshwater	MAIEHAIVSVGSTATLLTVAASGGGKDGSTILVQNPSGGQAVYLGGAGVTTSSYGFILAVNSNISIELNQDEAVYAVVASST
Ga0170791_158742391	3300013295	Freshwater	MAINHSIVSVGSTATLLTVAALGGGKDGSTILVQNPTGGQVVFLGGEGVTSSSYGYKLAVGSDMSIELNQDEA
Ga0177922_103206152	3300013372	Freshwater	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPTGGQAVFIGGAGVTTSSYGYKLAIDSDMSIELNQDEAVYGVVASSTQAVAVLRQGV*
Ga0177922_107479182	3300013372	Freshwater	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV*
Ga0181364_10094122	3300017701	Freshwater Lake	MAIAHAIVSVGTSATLLTVALEGGGKDGSTILVQNPAGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0181347_10370551	3300017722	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDE
Ga0181347_11027912	3300017722	Freshwater Lake	MAINHALVSVGSTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0181362_10210351	3300017723	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNMSIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181362_10625691	3300017723	Freshwater Lake	MAIAHAIVSVGTSATLLTVALEGGGKDGSTIFVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNIRIDLNQGEALYAVVASSTQSVAVLRQGV
Ga0181362_10654932	3300017723	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNMSIELNQDEALYAVVASSTQSVAVLRQGV
Ga0181362_10692113	3300017723	Freshwater Lake	MAINHALVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNIAIELNQDEALYGVVASS
Ga0181365_11188132	3300017736	Freshwater Lake	NGVPLFFKGVQMAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNMSIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181365_11402272	3300017736	Freshwater Lake	MAIDHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181356_10559711	3300017761	Freshwater Lake	MAINHALVSVTTTATLLTVAAVGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQG
Ga0181356_11672441	3300017761	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181356_11702012	3300017761	Freshwater Lake	MAIAHAIVSVGTSATLLTVATAGGGKDGSTILIQNPAGGQAVFIGGAGVTSSSYGYKLAIDSDMSIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0181356_11857273	3300017761	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNIAIELNQDEALYAVVASSTQ
Ga0181356_12380522	3300017761	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPAGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEA
Ga0181358_11685601	3300017774	Freshwater Lake	MAIAHAIVSVGTSATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNIAIELNQDEALYGVVASSTQSVAVLRQGV
Ga0181358_12188542	3300017774	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPSGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181358_12894541	3300017774	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNISIELNQDEALYGVVAATTQ
Ga0181357_11023751	3300017777	Freshwater Lake	TVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181357_11788942	3300017777	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTIFVQNPTGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0181357_12401911	3300017777	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPAGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYAV
Ga0181349_11229133	3300017778	Freshwater Lake	VAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNMSIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181349_11265532	3300017778	Freshwater Lake	MSIAHAIVSVGTSATLLTVATAGGGKDGSTILIQNPAGGQAVFIGGAGVTSSSYGYKLAIDSDMSIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0181349_12194943	3300017778	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNIAIELNQDE
Ga0181349_12872001	3300017778	Freshwater Lake	TLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181346_11818032	3300017780	Freshwater Lake	ALVSVTTTATLLTVAAVGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181348_10451495	3300017784	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFIGGAGVTTASYGYKLAIDSTITIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181348_11909881	3300017784	Freshwater Lake	KFQRSTMAINHAIVSVGTTATLLTVAASGGGKDGSSILVQNPSGGQAVFFGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181348_11965742	3300017784	Freshwater Lake	MAINHALVSVTTTATLLTVAAVGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGFKLAVDSNIAIELNQDEALYAVVAATTQSVAVLRQGV
Ga0181355_10480584	3300017785	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTIVIQNPTGGQAVFLGGAGVTSASYGFKLAIDSNMAIELNQDEALYAVVASSTQSVAVLRQGV
Ga0181359_10152671	3300019784	Freshwater Lake	MAIAHAIVSVGTSATLLTVALEGGGKDGSTILVQNPTGGQAVFIGGSGVTTASYGYKLAIDSTITIELNQDEALYAVVAATTQSVAVLRQGV
Ga0181359_10182513	3300019784	Freshwater Lake	MAINHAIVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181359_10603122	3300019784	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0181359_11042243	3300019784	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181359_11271411	3300019784	Freshwater Lake	ELTVAASGGGKDGSTILVQNPTGGQAVFIGGAGVTSASYGYKLAIDSTITIELNQDEALYGVVASSTQSVAVLRQGV
Ga0181359_11445222	3300019784	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNISIELNQDEALYGVVAATTQSVAVLRQGV
Ga0181359_12604542	3300019784	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGEGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0222712_101896621	3300021963	Estuarine Water	TATLLTVAASGGGKDGSTILIQNPTGGQAVFIGGAGVTTSSYGYKLAIDSNISIELNQDEAVYGVVASSTQAVAVLRQGV
Ga0181354_12441842	3300022190	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNIAIELNQDEALYAVVASSTQSVAVLRQGV
Ga0181351_10796654	3300022407	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGSGVTSASYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0181351_10932993	3300022407	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPSGGQAVFLGGTGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0181351_11317613	3300022407	Freshwater Lake	SVTTSATLLTVAASGGGKDGSTILVQNPTGGQAVYLGGAGVTSASYGYKLAVDSNIAIELNQDEALYGVVAATTQSVAVLRQGV
Ga0214917_102578512	3300022752	Freshwater	MAINHGIVSVGTTATLLTVAALGGGKDGSTIFIQNPTGGQAVYLGGAGVTTSSYGYILAINSNIRIDLNQDEALYGVVASTTQSVAVLRQGV
Ga0255236_10035822	3300024563	Freshwater	MAINHAIVSVGTTATLLTVATAGGGRDGSTILVQNPTGGQAVFLGGAGVTSASYGFKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0208966_11577561	3300027586	Freshwater Lentic	MAIAHGIVSVGTSATLLTVALEGGGKDGSTIFIQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNIRIDLNQGEALYAVVASSTQSVAVLRQGV
Ga0208974_10218391	3300027608	Freshwater Lentic	HAIVSVGTTATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0208974_10345192	3300027608	Freshwater Lentic	MAIAHAIVSVGTTATLLTVATEGGGKDGSTILVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0208975_11656452	3300027659	Freshwater Lentic	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPTGGQAVFIGGAGVTTSSYGYKLAIDSDMSIELNQDEAVYGVVASSTQAVAVLRQGV
Ga0209553_10723191	3300027688	Freshwater Lake	MAINHALVSVGTTATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0209553_12788991	3300027688	Freshwater Lake	IAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGEGVTSSSYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0209297_11998462	3300027733	Freshwater Lake	MAINHALVSVGTSATLLTVAASGGGKDGSTILIQNPTGGVSVYLGGAGVTSSVYGFILAAGSNISIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0209087_12108762	3300027734	Freshwater Lake	MAINHAIVSVGSTATLLTVAALGGGKDGSTILVQNPTGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0209190_10655482	3300027736	Freshwater Lake	MAINHALVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSAYGFILAAGSNIAIELNQDEALYGAVASSTQSVAVLRQGV
Ga0209596_100017268	3300027754	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVAVYLGGAGVTSSAYGFILAAGTNIAIELNQDEALYGAVASSTQSVAVLRQGV
Ga0209444_100262846	3300027756	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGSGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0209296_100084143	3300027759	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSSYGYILAAGSNISIELNQDEALYGAVASSTQSVAVLRQGV
Ga0209296_10374613	3300027759	Freshwater Lake	MAINHAIVSVGTSATLLTVAASGGGKDGSTILVQNPSGGVSVYLGGAGVTSSAYGFILAAGTNIAIELNQDEALYGAVASSTQSVAVLRQGV
Ga0209768_100555915	3300027772	Freshwater Lake	MAIAHAIVSVGTSATLLTVATAGGGKDGSTILIQNPAGGQAVFIGGAGVTSSSYGYKLAIDSDMSIE
Ga0209768_103012372	3300027772	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPAGGQAVFLGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0209354_100974822	3300027808	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0209550_100328312	3300027892	Freshwater Lake	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPAGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0209400_10005061	3300027963	Freshwater Lake	MAINHALVTVGTSATLLTVAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAIDSDIAIELNQDEALYGVVASTTQSVAVLRQG
Ga0209401_100006817	3300027971	Freshwater Lake	MAINHAIVSVGSTATLLTVAASGGGKDGSTILIQNPAGGQAVFLGGAGVTSSSYGYKLAIDSNISIELNQDEAVYGVVASSTQSVAVLRQGV
Ga0315905_101481724	3300032092	Freshwater	MAIAHAIVSVGTTATLLTVATAGGGKDGSTILVQNPTGGQAVFIGGSGVTSASYGYKLAIDSNISIELNQDEALYAVVASSTQSVAVLRQGV
Ga0335019_0255700_108_386	3300034066	Freshwater	MAINHAIVSVGATATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSSSYGYRLASGSDMSMELNQDEEVYGVVASSTQSVAVLRQGV
Ga0335027_0709299_1_246	3300034101	Freshwater	VPLFSKGVQMAINHAIVSVGATATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSSSYGYRLASGSDMSMELNQDEE
Ga0335029_0015361_142_420	3300034102	Freshwater	MAINHAIVSVGSTATLLTNAASGGGKDGSTILVQNPTGGQAVFLGGAGVTSASYGYKLAVDSNISIELNQDEALYGVVASSTQSVAVLRQGV
Ga0335031_0415603_197_475	3300034104	Freshwater	MAINHAIVSVGATATLLTVAASGGGKDGSTILIQNPTGGQAVFLGGAGVTSTSYGYKLAVGSDMSIELNQDEEVYGVVASSTQSVAVLRQGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096619

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences