NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096610

Metagenome / Metatranscriptome Family F096610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096610
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 57 residues
Representative Sequence MANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLVTK
Number of Associated Samples 64
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 6.73 %
% of genes near scaffold ends (potentially truncated) 27.88 %
% of genes from short scaffolds (< 2000 bps) 49.04 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.808 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(39.423 % of family members)
Environment Ontology (ENVO) Unclassified
(84.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(93.269 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.93%    β-sheet: 18.97%    Coil/Unstructured: 43.10%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00383dCMP_cyt_deam_1 42.31
PF067253D 25.96
PF05496RuvB_N 1.92
PF03819MazG 1.92
PF03796DnaB_C 0.96
PF00268Ribonuc_red_sm 0.96
PF03567Sulfotransfer_2 0.96
PF10504DUF2452 0.96
PF01068DNA_ligase_A_M 0.96
PF136612OG-FeII_Oxy_4 0.96
PF00872Transposase_mut 0.96
PF00085Thioredoxin 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 1.92
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 0.96
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.96
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.96
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.96
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.96
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.81 %
All OrganismsrootAll Organisms20.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000736|JGI12547J11936_1090943Not Available558Open in IMG/M
3300001968|GOS2236_1067190Not Available1510Open in IMG/M
3300003277|JGI25908J49247_10055695All Organisms → Viruses → Predicted Viral1021Open in IMG/M
3300003277|JGI25908J49247_10084547Not Available778Open in IMG/M
3300003490|JGI25926J51410_1007733Not Available2242Open in IMG/M
3300004461|Ga0066223_1165882Not Available979Open in IMG/M
3300004810|Ga0007757_11525212All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300005580|Ga0049083_10021770Not Available2309Open in IMG/M
3300005581|Ga0049081_10247235Not Available627Open in IMG/M
3300005582|Ga0049080_10057804Not Available1336Open in IMG/M
3300005583|Ga0049085_10168851Not Available733Open in IMG/M
3300005739|Ga0076948_1105320Not Available3392Open in IMG/M
3300005805|Ga0079957_1249151Not Available825Open in IMG/M
3300008072|Ga0110929_1085495Not Available595Open in IMG/M
3300008953|Ga0104241_1000692Not Available2696Open in IMG/M
3300009068|Ga0114973_10022499All Organisms → Viruses → Predicted Viral3894Open in IMG/M
3300009149|Ga0114918_10121604Not Available1591Open in IMG/M
3300009152|Ga0114980_10545701Not Available658Open in IMG/M
3300009159|Ga0114978_10005312Not Available10306Open in IMG/M
3300009159|Ga0114978_10158786Not Available1452Open in IMG/M
3300010354|Ga0129333_10320278Not Available1384Open in IMG/M
3300010354|Ga0129333_11183506Not Available635Open in IMG/M
3300010885|Ga0133913_10281563Not Available4410Open in IMG/M
3300010885|Ga0133913_10283911All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4390Open in IMG/M
3300010885|Ga0133913_10550582Not Available3034Open in IMG/M
3300010885|Ga0133913_11440797Not Available1749Open in IMG/M
3300012000|Ga0119951_1016691Not Available2751Open in IMG/M
3300012013|Ga0153805_1005886Not Available2150Open in IMG/M
(restricted) 3300013126|Ga0172367_10063224All Organisms → cellular organisms → Bacteria2821Open in IMG/M
(restricted) 3300013126|Ga0172367_10067698Not Available2691Open in IMG/M
(restricted) 3300013126|Ga0172367_10150436Not Available1538Open in IMG/M
(restricted) 3300013128|Ga0172366_10076615Not Available2269Open in IMG/M
(restricted) 3300013130|Ga0172363_10887940Not Available552Open in IMG/M
(restricted) 3300013131|Ga0172373_10138692Not Available1750Open in IMG/M
(restricted) 3300013132|Ga0172372_10052008Not Available3941Open in IMG/M
(restricted) 3300013137|Ga0172375_10088802Not Available2735Open in IMG/M
3300014050|Ga0119952_1014889Not Available2825Open in IMG/M
3300014050|Ga0119952_1019561Not Available2299Open in IMG/M
3300014050|Ga0119952_1040966All Organisms → Viruses → Predicted Viral1325Open in IMG/M
(restricted) 3300014720|Ga0172376_10629517Not Available586Open in IMG/M
3300017778|Ga0181349_1205888Not Available677Open in IMG/M
3300017788|Ga0169931_10002363Not Available30829Open in IMG/M
3300017788|Ga0169931_10358391Not Available1104Open in IMG/M
3300018868|Ga0187844_10369440Not Available590Open in IMG/M
3300019093|Ga0187843_10169592Not Available938Open in IMG/M
3300019784|Ga0181359_1004268All Organisms → Viruses → Predicted Viral4521Open in IMG/M
3300019784|Ga0181359_1013652Not Available2963Open in IMG/M
3300019784|Ga0181359_1066847Not Available1366Open in IMG/M
3300019784|Ga0181359_1143010Not Available830Open in IMG/M
3300019784|Ga0181359_1216998Not Available604Open in IMG/M
3300020179|Ga0194134_10035606Not Available2945Open in IMG/M
3300020183|Ga0194115_10045268Not Available2854Open in IMG/M
3300020204|Ga0194116_10410540Not Available666Open in IMG/M
3300020220|Ga0194119_10472934Not Available796Open in IMG/M
3300020498|Ga0208050_1024286Not Available617Open in IMG/M
3300020544|Ga0207937_1041824Not Available655Open in IMG/M
3300021091|Ga0194133_10017421All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium7351Open in IMG/M
3300021376|Ga0194130_10046397All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3160Open in IMG/M
3300021424|Ga0194117_10352127Not Available684Open in IMG/M
3300022190|Ga0181354_1017873Not Available2212Open in IMG/M
3300022190|Ga0181354_1043648Not Available1487Open in IMG/M
3300022190|Ga0181354_1045852All Organisms → Viruses → Predicted Viral1452Open in IMG/M
3300022752|Ga0214917_10000045All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales132273Open in IMG/M
3300022752|Ga0214917_10004006Not Available16690Open in IMG/M
3300022752|Ga0214917_10004067Not Available16532Open in IMG/M
3300022752|Ga0214917_10012538All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium7678Open in IMG/M
3300022752|Ga0214917_10452728Not Available511Open in IMG/M
3300023174|Ga0214921_10004461Not Available20579Open in IMG/M
3300023174|Ga0214921_10005036Not Available18945Open in IMG/M
3300023174|Ga0214921_10008347Not Available13452Open in IMG/M
3300023174|Ga0214921_10011626Not Available10660Open in IMG/M
3300023174|Ga0214921_10024675Not Available6188Open in IMG/M
3300023174|Ga0214921_10029724Not Available5400Open in IMG/M
3300023174|Ga0214921_10046493All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon3897Open in IMG/M
3300023174|Ga0214921_10058957All Organisms → Viruses → Predicted Viral3271Open in IMG/M
3300023174|Ga0214921_10473405Not Available607Open in IMG/M
3300023179|Ga0214923_10007320All Organisms → cellular organisms → Bacteria12071Open in IMG/M
3300023179|Ga0214923_10008404Not Available11000Open in IMG/M
3300023179|Ga0214923_10038259All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon3861Open in IMG/M
3300023179|Ga0214923_10073030Not Available2453Open in IMG/M
3300023179|Ga0214923_10599433Not Available521Open in IMG/M
3300023184|Ga0214919_10000102All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales133340Open in IMG/M
3300027581|Ga0209651_1098137Not Available828Open in IMG/M
3300027621|Ga0208951_1005016Not Available4892Open in IMG/M
3300027644|Ga0209356_1098065Not Available857Open in IMG/M
3300027712|Ga0209499_1041801All Organisms → cellular organisms → Bacteria1943Open in IMG/M
(restricted) 3300027728|Ga0247836_1018708Not Available5335Open in IMG/M
(restricted) 3300027728|Ga0247836_1052428Not Available2331Open in IMG/M
(restricted) 3300027730|Ga0247833_1022200Not Available4573Open in IMG/M
(restricted) 3300027730|Ga0247833_1033598Not Available3185Open in IMG/M
(restricted) 3300027730|Ga0247833_1056158Not Available2059Open in IMG/M
(restricted) 3300027730|Ga0247833_1146442Not Available953Open in IMG/M
3300027760|Ga0209598_10076056Not Available1641Open in IMG/M
3300027763|Ga0209088_10000011All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales188747Open in IMG/M
3300027763|Ga0209088_10000013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales171916Open in IMG/M
3300027770|Ga0209086_10059902Not Available2092Open in IMG/M
(restricted) 3300027977|Ga0247834_1020145Not Available4905Open in IMG/M
(restricted) 3300027977|Ga0247834_1079018All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1567Open in IMG/M
(restricted) 3300027977|Ga0247834_1189018Not Available789Open in IMG/M
(restricted) 3300028553|Ga0247839_1313332Not Available584Open in IMG/M
(restricted) 3300028559|Ga0247831_1061553Not Available1849Open in IMG/M
(restricted) 3300029286|Ga0247841_10703558Not Available611Open in IMG/M
3300029930|Ga0119944_1032281Not Available670Open in IMG/M
3300031963|Ga0315901_10860572Not Available650Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater39.42%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake14.42%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake12.50%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.73%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic4.81%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.92%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.92%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.96%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.96%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.96%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.96%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.96%
Water BodiesEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies0.96%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300001968Marine microbial communities from Lake Gatun, Panama - GS020EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004810Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005739Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300008072Microbial Communities in Water bodies, Singapore - Site MAEnvironmentalOpen in IMG/M
3300008953Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013128 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300014050Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007BEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300018868Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50EnvironmentalOpen in IMG/M
3300019093Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020220Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100mEnvironmentalOpen in IMG/M
3300020498Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020544Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300027581Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027621Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027644Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027730 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8mEnvironmentalOpen in IMG/M
3300027760Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027770Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028553 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_16mEnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12547J11936_109094313300000736Freshwater And SedimentMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVSDLLTK*
GOS2236_106719033300001968MarineMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTTKLRNSVLVTK*
JGI25908J49247_1005569513300003277Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRNSDLVTS*
JGI25908J49247_1008454723300003277Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTS*
JGI25926J51410_100773313300003490Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLR
Ga0066223_116588223300004461MarineMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLLTK*
Ga0007757_1152521213300004810Freshwater LakePKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0049083_1002177023300005580Freshwater LenticMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRASDLLTK*
Ga0049081_1024723523300005581Freshwater LenticMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0049080_1005780413300005582Freshwater LenticMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVADLLTK*
Ga0049085_1016885123300005583Freshwater LenticMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS*
Ga0076948_110532073300005739Lake WaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK*
Ga0079957_124915113300005805LakeKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK*
Ga0110929_108549513300008072Water BodiesMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRRLTSKLRNSVLVTK*
Ga0104241_100069223300008953FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRASDLLTK*
Ga0114973_1002249923300009068Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTNKLRASDLLTK*
Ga0114918_1012160423300009149Deep SubsurfaceMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLISKLRASDLLTR*
Ga0114980_1054570113300009152Freshwater LakeMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0114978_10005312253300009159Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTR*
Ga0114978_1015878643300009159Freshwater LakeMANRPKTYFVKMTDNINGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVADILTK*
Ga0129333_1032027823300010354Freshwater To Marine Saline GradientMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRHSVLVTK*
Ga0129333_1118350613300010354Freshwater To Marine Saline GradientIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK*
Ga0133913_10281563113300010885Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0133913_10283911123300010885Freshwater LakeMANRPKTYFVKMTDNINGTITISEAKILDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS*
Ga0133913_1055058213300010885Freshwater LakeYIIQYMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS*
Ga0133913_1144079763300010885Freshwater LakeMATRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRNADLLTK*
Ga0119951_101669173300012000FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLNKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0153805_100588623300012013Surface IceMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRGSDLLTK*
(restricted) Ga0172367_1006322453300013126FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTNKLRNSVLVTK*
(restricted) Ga0172367_1006769863300013126FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRTSVLVTK*
(restricted) Ga0172367_1015043653300013126FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK*
(restricted) Ga0172366_1007661553300013128SedimentMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTTKLRNSVLVTK*
(restricted) Ga0172363_1088794013300013130SedimentIIMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTTKLRNSVLVTK
(restricted) Ga0172373_1013869253300013131FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLNKVNQHARHWRSFDKRKLTSKLRTSVLVTK*
(restricted) Ga0172372_1005200873300013132FreshwaterMIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTNKLRNSVLVTK*
(restricted) Ga0172375_1008880273300013137FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLNKVNQHARHWRSFDKRKLTSKLRNSVLVTK*
Ga0119952_101488973300014050FreshwaterMANRPKTYFVKMTDNINGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK*
Ga0119952_101956133300014050FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLLTK*
Ga0119952_104096623300014050FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRVADLFTK*
(restricted) Ga0172376_1062951723300014720FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTNKLRTSVFVTK*
Ga0181349_120588833300017778Freshwater LakeMTNRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRNS
Ga0169931_10002363303300017788FreshwaterMAIRPKTYFVKMTDNTDGTITISETKVLDKVNQHARHWRSFDKRKLTNKLRNSVLVSK
Ga0169931_1035839123300017788FreshwaterMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK
Ga0187844_1036944023300018868FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASNLLTK
Ga0187843_1016959213300019093FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKL
Ga0181359_100426843300019784Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRNSDLVTS
Ga0181359_101365243300019784Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0181359_106684753300019784Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVSDLLTK
Ga0181359_114301033300019784Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKL
Ga0181359_121699813300019784Freshwater LakeRMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0194134_1003560683300020179Freshwater LakeMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRTSVLVTK
Ga0194115_1004526833300020183Freshwater LakeMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTNKLRTSVLVTK
Ga0194116_1041054023300020204Freshwater LakeYINIIIMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRTSVLVTK
Ga0194119_1047293433300020220Freshwater LakeMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTN
Ga0208050_102428623300020498FreshwaterLFNSLLLYKIYILLIIMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0207937_104182413300020544FreshwaterMAIRPKTYFVKMTDNTDGTFTISETKVLDKVNQHARHWRSFDKRKLTSKLRASDLLTK
Ga0194133_10017421193300021091Freshwater LakeMATRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRTSVLVTK
Ga0194130_1004639713300021376Freshwater LakeMAIRPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTSKLRTSVLVT
Ga0194117_1035212723300021424Freshwater LakePPKTYFVKMTDNTDGTITISESKVLDKVNQHARHWRSFDKRKLTNKLRTSVLVTK
Ga0181354_101787373300022190Freshwater LakeGLKYIYYIIIMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0181354_104364823300022190Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKILDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0181354_104585243300022190Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVADLLTK
Ga0214917_100000451183300022752FreshwaterMAIRPKTYFVKMTDNTDGTFTISETKVLDKVNQHARHWRSFDKRRLTSKLRNSVLVTK
Ga0214917_10004006413300022752FreshwaterMANRPKTYFVKMTDNINGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0214917_10004067363300022752FreshwaterMAVRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK
Ga0214917_10012538123300022752FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTS
Ga0214917_1045272823300022752FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLNKVNQHARHWRSFDKRKLTSKLRNSVLVT
Ga0214921_1000446183300023174FreshwaterMATRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRNADLLTK
Ga0214921_10005036353300023174FreshwaterMANRPKTYFVKMTDNVNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRNANLVTR
Ga0214921_10008347123300023174FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0214921_10011626333300023174FreshwaterMANRPKTYFVKLTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTS
Ga0214921_1002467573300023174FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSNLLTK
Ga0214921_1002972473300023174FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTNKLRVADLLTK
Ga0214921_10046493113300023174FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVADILTK
Ga0214921_1005895713300023174FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLVTK
Ga0214921_1047340533300023174FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTS
Ga0214923_10007320163300023179FreshwaterMAIRPKTYFVKMTDNTDGTFTISETKVLDKVNQHARHWRSFDKRKLTSKLRNSVLVTK
Ga0214923_10008404213300023179FreshwaterMANRPKTYFVKMTDNANGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRVADLFTK
Ga0214923_1003825913300023179FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTSKLRNSVLV
Ga0214923_1007303023300023179FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRASDLLTK
Ga0214923_1059943313300023179FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRRLTSKLRNS
Ga0214919_100001021193300023184FreshwaterMSYIIQYMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS
Ga0209651_109813713300027581Freshwater LakeIMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRNANLVTR
Ga0208951_1005016123300027621Freshwater LenticMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRASDLLTK
Ga0209356_109806523300027644Freshwater LakeYYIIIMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
Ga0209499_104180123300027712Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHARHWRSFDKRKLTSKLRVADLLTK
(restricted) Ga0247836_1018708103300027728FreshwaterMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDILTK
(restricted) Ga0247836_105242873300027728FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS
(restricted) Ga0247833_1022200113300027730FreshwaterMANRPKTYFVKMTDNTNGIITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS
(restricted) Ga0247833_103359813300027730FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTS
(restricted) Ga0247833_105615833300027730FreshwaterMATRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRASDLLTK
(restricted) Ga0247833_114644213300027730FreshwaterMANRPKTYFVKMTDNINGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTS
Ga0209598_1007605623300027760Freshwater LakeMANRPKTYFVKMTDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTNKLRASDLLTK
Ga0209088_10000011363300027763Freshwater LakeMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLRSSDLVTR
Ga0209088_100000131293300027763Freshwater LakeMANRPKTYFVKMTDNINGTFTISEAKVLDKVNQHTRHWRSFDKRKLTSKLRVADILTK
Ga0209086_1005990213300027770Freshwater LakeVSAIILYMANRPKTYFVKMTDNINGTITISEAKILDKVNQHTRHWRSFDKRKLTSKLRSSDLVTS
(restricted) Ga0247834_102014543300027977FreshwaterMANRPKTYFVKLTDNTNGTITISEAKILDKVNQHARHWRSFDKRKLTSKLRSSDLVTS
(restricted) Ga0247834_107901813300027977FreshwaterMANRPKTYFVKITDNTNGTFTISEAKVLDKVNQHTRHWRSFDKRKLTNKLRASDLLTK
(restricted) Ga0247834_118901843300027977FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHARHWRSFDKRKLTSKLR
(restricted) Ga0247839_131333213300028553FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSS
(restricted) Ga0247831_106155373300028559FreshwaterMANRPKTYFVKMTDNTNGTITISEAKVLDKVNQHTRHWRSFDKRKLTSKLRSSDLVT
(restricted) Ga0247841_1070355823300029286FreshwaterIPYNIQYMANRPKTYFVKLTDNTNGTITISEAKILDKVNQHARHWRSFDKRKLTSKLRSSDLVTS
Ga0119944_103228123300029930AquaticMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHTRHWRSFDKRKLTSKLRNSVLVTK
Ga0315901_1086057223300031963FreshwaterMAIRPKTYFVKMTDNTDGTFTISESKVLDKVNQHARHWRSFDKRKLTTKLRNSVLVTK


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