Basic Information | |
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Family ID | F096503 |
Family Type | Metagenome |
Number of Sequences | 104 |
Average Sequence Length | 55 residues |
Representative Sequence | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLAFVTK |
Number of Associated Samples | 73 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 90.91 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 67 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (97.115 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (35.577 % of family members) |
Environment Ontology (ENVO) | Unclassified (85.577 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (82.692 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 71.43% Coil/Unstructured: 28.57% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Lentic Freshwater Freshwater Lake Sediment Freshwater Freshwater Anoxic Zone Freshwater Freshwater Lake Freshwater Lake Hypolimnion Freshwater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
TB18AUG2009E_0108823 | 3300000203 | Freshwater | GNMIKMSIRTGRKITWGAAAIVALYVDVTSSGGISFWMAVYGLGTAVTVAILLAFITKR* |
TBL_comb48_EPIDRAFT_10465865 | 3300000439 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLALVTK* |
TBL_comb48_EPIDRAFT_10472042 | 3300000439 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLAFVTK* |
JGI24028J26656_10162651 | 3300002091 | Lentic | MIKMTYRTGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAF |
JGI24028J26656_10183082 | 3300002091 | Lentic | VLGKIPAPEEAQMFKLNYRTGRKLVWGSAAIVFMYVXLTAQGGISFWAAVYGLGTAVVVATLLAFITK* |
JGI24028J26656_10196832 | 3300002091 | Lentic | MIKMTYRTGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR* |
JGI24218J26658_10068954 | 3300002092 | Lentic | VLGKIPAPEEAQMFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISFWAAVYGLGTAVVVATLLAFITK* |
JGI24891J29808_10024875 | 3300002301 | Lentic | MFKLNYRTGRKLVWGSAAIVFMYVXLTAQGGISFWAAVYGLGTAVVVATLLAFITK* |
JGI24890J29729_10118732 | 3300002307 | Lentic | MIKMTYRTGSKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR* |
G310J44882_1000082715 | 3300002933 | Freshwater | MIKMSIRTGRKITWGAAAIVALYVDVTSSGGISFWMAVYGLGTAVTVAILLAFITKR* |
G310J44882_100083469 | 3300002933 | Freshwater | MIKMSYRTGRKIVWGSAAIVGLYVDLTASGGISFWVAVYGLGTAVAVATLLAFITKR* |
G310J44882_100132364 | 3300002933 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVGVATFLAFVTK* |
G310J44882_101000921 | 3300002933 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK* |
JGI26470J50227_10075866 | 3300003375 | Freshwater | MFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISFWAAVYGLGTAVVVATLLAFITK* |
JGI26470J50227_10111444 | 3300003375 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVVVATFLALVTK* |
JGI26470J50227_10185093 | 3300003375 | Freshwater | MIKMSYRTGRKIVWGSAIIVGLYVDFTATGGISFWVAVYALATAVAVATLLAFITKR* |
JGI26470J50227_10338192 | 3300003375 | Freshwater | MFKLDYRTGRKLVWGSAAIVALYVDLTATGGISFWAAVYGLGTAVVVATLLALITKR* |
Ga0007850_10013033 | 3300003783 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK* |
Ga0007811_10059834 | 3300003787 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK* |
Ga0007835_10013664 | 3300003789 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWATVYGLGTAVVVATFLALFTK* |
Ga0007865_10216712 | 3300003796 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVVVA |
Ga0007865_10264992 | 3300003796 | Freshwater | GRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFITK* |
Ga0007846_10092631 | 3300003797 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDXTADGGISFWAAVYGLATAVGVATFLALVTK* |
Ga0007842_10072831 | 3300003798 | Freshwater | MFKLSYRTGRKLVWGTSAIVFLYVDVTAEGGISFWAAVYGLATAVGVATFLALVTK* |
Ga0007863_10029065 | 3300003820 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLATAVGVATFLAFVTK* |
Ga0031655_102912441 | 3300003852 | Freshwater Lake Sediment | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFL |
Ga0065176_10108601 | 3300004691 | Freshwater | QQNPEEGIMIKMSYRTGRKIVWGSAAIVGLYVDLTASGGISFWVAVYGLGTAVAVATLLAFITKR* |
Ga0007804_10913062 | 3300004770 | Freshwater | KLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK* |
Ga0007881_10263102 | 3300006072 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFITK* |
Ga0007881_11101571 | 3300006072 | Freshwater | MFKLDYRTGRKLVWGTAAIVFIYVDVTADGGISFWAAVYGLATAVGVATFLALVTK* |
Ga0007806_10731112 | 3300006100 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAQGGISFWATVYGLGTAVVVATFLALVTK* |
Ga0007813_10641061 | 3300006103 | Freshwater | MFKLDYRTGRKLVWGTAAIVFIYVDVTADGGISFWATVYGLGTAVVVATFLALVTK* |
Ga0007871_11150072 | 3300006110 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDLTADGGISFWAAVYGLATAVGVATFLALVTK* |
Ga0007824_11155051 | 3300006121 | Freshwater | KLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK* |
Ga0114962_1000179523 | 3300009151 | Freshwater Lake | MIKMSYRQGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR* |
Ga0114962_102917602 | 3300009151 | Freshwater Lake | MFKLSYRTGRKLVWGTAAIVFMYVDLTAEGGISFWATVYGLGTAVVAATFLALISK* |
Ga0114962_105018772 | 3300009151 | Freshwater Lake | MFKLSYRTGRKLVWGTAAIVFMYVDLTAEGGISFWATVYGLGTAVVVATFLALISK* |
Ga0073936_1000485114 | 3300009175 | Freshwater Lake Hypolimnion | MFKLNYRTGRKLVWGTAAIVFLYVDVTATGGIFFWATVYGLGTAVVVATLLALISK* |
Ga0164296_14083662 | 3300013093 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLAFVTK* |
Ga0164297_102363923 | 3300013094 | Freshwater | LVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK* |
Ga0164297_103574092 | 3300013094 | Freshwater | VLGKIPAPEEAQMFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISIWAAVYGLGTAVVVATLLAFITK* |
Ga0136642_10099165 | 3300013285 | Freshwater | VLGIIPAPEEAQMFKLSYRTGRKLVWGTAAIVFMYVDLTATGGISFWAAVYGLGTAVVVATFLALITK* |
Ga0136641_10365042 | 3300013286 | Freshwater | VVGKIPAPEEAQMFKLNYRTGKKLVWGTAAIVFMYVDLTATGGISFWATVYGLGTAVVVATFLALITK* |
Ga0136641_10803912 | 3300013286 | Freshwater | VVWKIPAPEEAQMFKLNYRTGRKLVWGTAAIVFLYVDLTATGGISFWAAVYGLGTAVVVATFLAFITK* |
Ga0214256_1092092 | 3300020685 | Freshwater | IRTGRKITWGAAAIVALYVDVTSSGGISFWMAVYGLGTAVTVAILLAFITKR |
Ga0214256_1098563 | 3300020685 | Freshwater | MIKMSYRTGRKIVWGSAAIVGLYVDLTASGGISFWVAVYGLGTAVAVATLLAFITKR |
Ga0214194_1014693 | 3300020686 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLAFVTK |
Ga0214194_1098362 | 3300020686 | Freshwater | MIKMSIRTGRKITWGAAAIVALYVDVTSSGGISFWMAVYGLGTAVTVAILLAFITKR |
Ga0214239_1088792 | 3300020688 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVGVATFLAFVTK |
Ga0214226_10197471 | 3300020693 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLALVTK |
Ga0214227_10038933 | 3300020703 | Freshwater | MIKMSYRTGRKIVWGSAAIVGLYVDLTASGGISFWVAVYGLGTAVVVATLLAFITKR |
Ga0214233_10399372 | 3300020709 | Freshwater | MSYRTGRKIVWGSAAIVGLYVDLTASGGISFWVAVYGLGTAVAVATLLAFITKR |
Ga0214207_10022995 | 3300020716 | Freshwater | MFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISFWAAVYGLGTAVVVATLLAFITK |
Ga0214207_10089915 | 3300020716 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK |
Ga0214178_10003517 | 3300020718 | Freshwater | VLGKIPAPEEAQMFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISFWAAVYGLGTAVVVATLLAFITK |
Ga0214246_10351921 | 3300020727 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK |
Ga0214243_1019694 | 3300021116 | Freshwater | EAQMFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVGVATFLAFVTK |
Ga0214179_10959972 | 3300021129 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATA |
Ga0214180_10332072 | 3300021130 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVY |
Ga0214206_10054423 | 3300021131 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLALVTK |
Ga0194047_1000171222 | 3300021354 | Anoxic Zone Freshwater | MFKLSYRTGRKLVWGTAAIVFMYVDLTAEGGISFWATVYGLGTAVVVATFLALISK |
Ga0194048_1000056618 | 3300021519 | Anoxic Zone Freshwater | MIKMSYRQGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR |
Ga0212088_1000239237 | 3300022555 | Freshwater Lake Hypolimnion | MFKLNYRTGRKLVWGTAAIVFLYVDVTATGGIFFWATVYGLGTAVVVATLLALISK |
Ga0212088_107790371 | 3300022555 | Freshwater Lake Hypolimnion | GKIPAPEEAQMFKLNYRTGRKLVWGSAAIVFMYVDLTAQGGISFWAAVYGLGTAVVVATLLAFITK |
Ga0248169_10524523 | 3300022602 | Freshwater | MFKLNYRTGRKLVWGTAAIVFMYVDLTAQGGISFWATVYGLGTAVVVATLLALITK |
Ga0248169_10674822 | 3300022602 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK |
Ga0209083_11312162 | 3300025162 | Freshwater | MTYRTGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR |
Ga0209697_100370632 | 3300025316 | Freshwater Lake Hypolimnion | MIKMTYRTGRKIVWGSAAIVGLYVDVTATGGISFWVAVYGLGTAVVVATLLAFITKR |
Ga0208383_10084213 | 3300025357 | Freshwater | MFKLDYRTGRKLVWGSAAIVALYVDLTATGGISFWAAVYGLGTAVVVATLLALITKR |
Ga0208383_10200161 | 3300025357 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLATAVGVATFLALVTK |
Ga0208383_10229582 | 3300025357 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWATVYGLGTAVAVATFLALVTK |
Ga0208257_10369672 | 3300025389 | Freshwater | MIKMSIRTGRKITWGAAAIVALYVDVTSSGGISFWMAVYGLGTAVTVATLLAFITKR |
Ga0208874_10068353 | 3300025396 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWATVYGLATAVGVATFLALVTK |
Ga0208251_10087895 | 3300025398 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLAFVTK |
Ga0208387_10162562 | 3300025400 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFITK |
Ga0208876_10182974 | 3300025402 | Freshwater | MFKLDYRTGRKLVWGTAAIVFIYVDVTADGGISFWATVYGLGTAVVVATFLALVTK |
Ga0208253_10018556 | 3300025418 | Freshwater | MFKLDFRTGRKLVWGTAAIVFLYVDVTADGGISFWATVYGLATAVGVATFLALVTK |
Ga0208617_10076301 | 3300025424 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLAT |
Ga0208742_10060634 | 3300025437 | Freshwater | MFKLDYRTGRKLVWGTAAIVFIYVDVTADGGISFWAAVYGLATAVGVATFLALVTK |
Ga0208379_11457162 | 3300025598 | Freshwater | PEEAQMFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLATAVGVATFLALVT |
Ga0208507_11339431 | 3300025648 | Freshwater | EEAQMFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVVVATFLAFVTK |
Ga0208741_100656102 | 3300025723 | Freshwater | TGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK |
Ga0208104_10179324 | 3300025773 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWATVY |
Ga0208104_10262562 | 3300025773 | Freshwater | KLVWGTAAIVFLYVDVTAEGGISFWAAVYGLATAVGVATFLALVTK |
Ga0208258_10292082 | 3300025783 | Freshwater | EEAQMFKLSYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLAFVTK |
Ga0208498_10584201 | 3300025785 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDLTADGGISFWAAVYGLATAVGVATFLAFVTK |
Ga0209085_100300720 | 3300027741 | Freshwater Lake | MFKLSYRTGRKLVWGTAAIVFMYVDLTAEGGISFWATVYGLGTAVVAATFLALISK |
Ga0209777_101577122 | 3300027896 | Freshwater Lake Sediment | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK |
Ga0209777_106584351 | 3300027896 | Freshwater Lake Sediment | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLATAVVVATFLAFVTK |
Ga0209777_106631712 | 3300027896 | Freshwater Lake Sediment | MSYRTGRKIVWGSAAIVALYVDATATGGISFWVAVYGLGTAVAVATLLAFITKR |
Ga0316219_13000742 | 3300031759 | Freshwater | FKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLATAVGVATFLALVTK |
Ga0316219_13009101 | 3300031759 | Freshwater | MFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWATVYGLGTAVVVATFLALVTR |
Ga0316217_102097591 | 3300031813 | Freshwater | TGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK |
Ga0316217_103355542 | 3300031813 | Freshwater | EEAQMFKLDYRTGRKLVWGTAAIVFLYVDVTAEGGISFWAAVYGLGTAVVVATFLALVTK |
Ga0316218_10435426 | 3300032117 | Freshwater | LSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK |
Ga0316218_10615221 | 3300032117 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATA |
Ga0316218_11766003 | 3300032117 | Freshwater | LSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK |
Ga0316223_10635691 | 3300032560 | Freshwater | QMFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVGVATFLALVTK |
Ga0316223_12036141 | 3300032560 | Freshwater | QMFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLGTAVVVATFLALVTK |
Ga0316223_12668282 | 3300032560 | Freshwater | MFKLSYRTGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGL |
Ga0316226_11537671 | 3300032562 | Freshwater | MIKMSYRTGRKIVWGSAIIVGLYVDFTATGGISFWVAVYALATAVAVATLLAFITKR |
Ga0316232_12166531 | 3300032605 | Freshwater | RKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK |
Ga0316227_11422581 | 3300032677 | Freshwater | QMFKLDYRTGRKLVWGTAAIVFLYVDVTADGGISFWAAVYGLGTAVVVATFLALVTK |
Ga0316224_12491001 | 3300032753 | Freshwater | TGRKLVWGTAAIVFLYVDVTAQGGISFWAAVYGLATAVVVATFLAFVTK |
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