Metagenome / Metatranscriptome Family F096498

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F096498
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	89 residues
Representative Sequence	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
Number of Associated Samples	84
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.05 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	80.77 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine (40.385 % of family members)
Environment Ontology (ENVO)	Unclassified (95.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (76.923 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106. 1SI54feb11_120mDRAFT_10126251 2SI47jul10_100mDRAFT_10210375 3SI48aug10_120mDRAFT_10059575 4SI39nov09_135mDRAFT_10181543 5SI39nov09_135mDRAFT_10613432 6SI47jul10_150mDRAFT_10164185 7SI47jul10_150mDRAFT_10300154 8SI54feb11_100mDRAFT_100519112 9SI39nov09_120mDRAFT_10927142 10SI36aug09_135mDRAFT_10101222 11SI36aug09_135mDRAFT_10240414 12SI34jun09_200mDRAFT_10336021 13SI60aug11_200mDRAFT_10537722 14SI60aug11_100mDRAFT_10468662 15SI47jul10_135mDRAFT_10290243 16SI53jan11_120mDRAFT_10340973 17SI53jan11_150mDRAFT_10431111 18SI36aug09_120mDRAFT_10328191 19LP_F_10_SI03_120DRAFT_10148021 20SI39nov09_100mDRAFT_10272762 21JGI26238J51125_102880910 22JGI26244J51143_10100974 23JGI26244J51143_10488011 24JGI26239J51126_10512822 25JGI26263J51726_10782604 26JGI26382J51730_10292216 27JGI26381J51731_10397371 28JGI26380J51729_1000874010 29Ga0008650_11251071 30Ga0066610_101080532 31Ga0066611_100887259 32Ga0066609_1000234133 33Ga0066606_100509076 34Ga0066616_11866241 35Ga0066620_10124915 36Ga0066615_10069781 37Ga0066628_11758831 38Ga0114995_100836165 39Ga0114996_102139034 40Ga0114993_101032112 41Ga0114993_106049913 42Ga0114994_110243062 43Ga0114997_101552882 44Ga0114997_107188502 45Ga0115007_106440772 46Ga0115004_101588601 47Ga0115000_103696062 48Ga0115001_104942472 49Ga0114999_103787441 50Ga0114999_110676962 51Ga0233428_100394625 52Ga0233428_10626511 53Ga0233428_10635187 54Ga0233428_12270052 55Ga0233428_12810271 56Ga0233429_10732881 57Ga0233429_11705612 58Ga0233429_13189522 59Ga0233431_10611982 60Ga0233433_104128992 61Ga0255050_100616471 62Ga0233436_10326566 63Ga0233438_101532252 64Ga0233439_100499481 65Ga0233439_104604383 66Ga0233444_101478493 67Ga0233448_100207910 68Ga0233434_10959332 69Ga0233445_11925531 70Ga0255049_103032212 71Ga0209250_10212416 72Ga0209685_100274511 73Ga0209142_10487791 74Ga0209556_10435274 75Ga0209662_10964261 76Ga0209361_10442772 77Ga0209054_10477061 78Ga0209249_10812071 79Ga0209664_11705953 80Ga0209663_11183793 81Ga0209657_10554785 82Ga0209657_11302602 83Ga0209657_11645213 84Ga0209263_10905723 85Ga0209140_11178133 86Ga0209044_10133681 87Ga0209252_11661092 88Ga0209709_101750091 89Ga0209502_101186412 90Ga0209091_100460517 91Ga0209089_100377612 92Ga0209089_102099093 93Ga0257123_100563318 94Ga0257117_10611121 95Ga0257117_10653634 96Ga0257117_11450152 97Ga0257122_10313752 98Ga0257127_10634706 99Ga0257121_11936453 100Ga0257126_10543975 101Ga0307488_100663743 102Ga0307488_101827003 103Ga0307489_103770091 104Ga0314858_074947_2_259
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106. 1SI54feb11_120mDRAFT_10126251 2SI47jul10_150mDRAFT_10300154 3JGI26244J51143_10488011
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106. 1SI54feb11_120mDRAFT_10126251 2SI47jul10_150mDRAFT_10300154 3JGI26244J51143_10488011
Powered by MSAViewer

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.19% β-sheet: 29.67% Coil/Unstructured: 57.14%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01764	Lipase_3	1.92
PF09723	Zn-ribbon_8	1.92
PF00497	SBP_bac_3	0.96
PF02086	MethyltransfD12	0.96
PF02310	B12-binding	0.96
PF02690	Na_Pi_cotrans	0.96
PF04820	Trp_halogenase	0.96

Showing 1 to 7 of 7 entries

Previous1Next

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.96
COG1283	Na+/phosphate symporter	Inorganic ion transport and metabolism [P]	0.96
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	37.50 %
Unclassified	root	N/A	62.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	14.42 %
Unclassified	root	N/A	62.50 %
Viruses	superkingdom	All Organisms → Viruses	23.08 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	10.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	10.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
Unclassified	root	N/A	62.50 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	10.58 %

Name	Rank	Taxonomy	Distribution
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.58 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	1.92 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	10.58 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.08 %
Unclassified	root	N/A	62.50 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300022888\|Ga0233428_1003946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	11960	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1062651	Not Available	1471	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1063518	Not Available	1457	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1227005	Not Available	603	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1281027	Not Available	518	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1073288	Not Available	1477	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1170561	Not Available	795	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1318952	Not Available	502	Open in IMG/M
(restricted) 3300022916\|Ga0233431_1061198	All Organisms → Viruses → Predicted Viral	1953	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10412899	Not Available	527	Open in IMG/M

Showing 1 to 10 of 103 entries

Previous1 2 3 4 5…11Next

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	3.85%
Inlet	Environmental → Aquatic → Marine → Inlet	26.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	40.38%
Oceanic	Environmental → Aquatic → Marine → Oceanic	22.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.73%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.96%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	40.38%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	26.92%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	21.15%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.85%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	40.38%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.15%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	7.69%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.96%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.88%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.96%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	19.23%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000146	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 120m	Environmental	Open in IMG/M
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental	Open in IMG/M
3300000150	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 120m	Environmental	Open in IMG/M
3300000153	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135m	Environmental	Open in IMG/M
3300000154	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 150m	Environmental	Open in IMG/M
3300000158	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100m	Environmental	Open in IMG/M
3300000167	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120m	Environmental	Open in IMG/M
3300000170	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 135m	Environmental	Open in IMG/M
3300000172	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 200m	Environmental	Open in IMG/M
3300000174	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 60 08/10/11 200m	Environmental	Open in IMG/M

Showing 1 to 10 of 84 entries

Previous1 2 3 4 5…9Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI54feb11_120mDRAFT_10126251	3300000146	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCD
SI47jul10_100mDRAFT_10210375	3300000148	Marine	EINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR*
SI48aug10_120mDRAFT_10059575	3300000150	Marine	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI39nov09_135mDRAFT_10181543	3300000153	Marine	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEVEKMGFKYIEDEDRS*
SI39nov09_135mDRAFT_10613432	3300000153	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI47jul10_150mDRAFT_10164185	3300000154	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI47jul10_150mDRAFT_10300154	3300000154	Marine	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSL
SI54feb11_100mDRAFT_100519112	3300000158	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI39nov09_120mDRAFT_10927142	3300000167	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI36aug09_135mDRAFT_10101222	3300000170	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR*
SI36aug09_135mDRAFT_10240414	3300000170	Marine	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEV
SI34jun09_200mDRAFT_10336021	3300000172	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAETDEEVIKCRAEPYSLDEVEKMGFKYKCD
SI60aug11_200mDRAFT_10537722	3300000174	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDGR
SI60aug11_100mDRAFT_10468662	3300000192	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKM
SI47jul10_135mDRAFT_10290243	3300000193	Marine	KCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI53jan11_120mDRAFT_10340973	3300000215	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFK
SI53jan11_150mDRAFT_10431111	3300000216	Marine	PKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI36aug09_120mDRAFT_10328191	3300000239	Marine	INVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
LP_F_10_SI03_120DRAFT_10148021	3300000256	Marine	NEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
SI39nov09_100mDRAFT_10272762	3300000325	Marine	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
JGI26238J51125_102880910	3300003478	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDESVIKCRAEPYSLDEVEKMGFKYKCDNGG*
JGI26244J51143_10100974	3300003495	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTEXDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
JGI26244J51143_10488011	3300003495	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYLCGLDTIDPDKVQEFYTYCDKCDTFTTYRRGEKKEEVAVECRAEPYSLDEVEKMGFKYIEDEDRS*
JGI26239J51126_10512822	3300003498	Marine	MGLYDEINVDIKCPKCGSNEMXWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
JGI26263J51726_10782604	3300003595	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDESVIKCRAEPYSLDEVEKM
JGI26382J51730_10292216	3300003601	Marine	GSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDESVIKCRAEPYSLDEVEKMGFKYKCDNGG*
JGI26381J51731_10397371	3300003618	Marine	NEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
JGI26380J51729_1000874010	3300003619	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDESVIKCRAEPYSLDEVEXMGFXYKCXNGG*
Ga0008650_11251071	3300004109	Marine	YNMGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEVEKMGFKYIEDEDRS*
Ga0066610_101080532	3300004276	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
Ga0066611_100887259	3300004277	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG*
Ga0066609_1000234133	3300004278	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPY
Ga0066606_100509076	3300004280	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR*
Ga0066616_11866241	3300004637	Marine	MYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAENDDAYTKCRAEPYSLDEVEKM
Ga0066620_10124915	3300004639	Marine	MYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAENDDAYTKCRAEPYSLDEVEKMGFKYKCDGR*
Ga0066615_10069781	3300004640	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDGR*
Ga0066628_11758831	3300004968	Marine	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR*
Ga0114995_100836165	3300009172	Marine	MGMYDEINVDIKCPKCGANGMTWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEDEEVKK*
Ga0114996_102139034	3300009173	Marine	MGMYDEINVDIKCPKCGANDVNWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVVTECRAEPYSLDEVEKMGFEYIEDEEVKK*
Ga0114993_101032112	3300009409	Marine	MGMYDEINVDIKCPKCGANDVNWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEDEEVKK*
Ga0114993_106049913	3300009409	Marine	IVGLNMGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRSEPYSLDEVEKMGFEYIEDEEVKKVGTE*
Ga0114994_110243062	3300009420	Marine	MGLYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEM*
Ga0114997_101552882	3300009425	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE*
Ga0114997_107188502	3300009425	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEE*
Ga0115007_106440772	3300009441	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVVTECRAEPYSLDEVEKMGFEYIEM*
Ga0115004_101588601	3300009526	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEDEEVKK*
Ga0115000_103696062	3300009705	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVATECRAEPYSLDEVEKMGFEYIEM*
Ga0115001_104942472	3300009785	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIE
Ga0114999_103787441	3300009786	Marine	GNIMGMYDEINVDIKCPKCGANDVNWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVVTECRAEPYSLDEVEKMGFEYIEDEEVKK*
Ga0114999_110676962	3300009786	Marine	MGMYDEINVDIKCPKCGANEMNWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFIIYRRGEKKEAVAAECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE*
(restricted) Ga0233428_100394625	3300022888	Seawater	MGMYDEINVDIKCPKCGANDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE
(restricted) Ga0233428_10626511	3300022888	Seawater	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR
(restricted) Ga0233428_10635187	3300022888	Seawater	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDESVIKCRAEPYSLDEVEKMGFKYKCDNGG
(restricted) Ga0233428_12270052	3300022888	Seawater	MGMYDEINVDIKCPKCGSNEMDWQSKDYMRGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
(restricted) Ga0233428_12810271	3300022888	Seawater	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
(restricted) Ga0233429_10732881	3300022902	Seawater	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
(restricted) Ga0233429_11705612	3300022902	Seawater	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEVEKMGFKYIEDEDRS
(restricted) Ga0233429_13189522	3300022902	Seawater	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
(restricted) Ga0233431_10611982	3300022916	Seawater	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
(restricted) Ga0233433_104128992	3300022931	Seawater	MGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFTTYRRGAETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
(restricted) Ga0255050_100616471	3300024052	Seawater	MGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFIIYRRGEKKEAVAAECRAEQYSLDEVEKMGFEYIEDEEVKKVGTE
(restricted) Ga0233436_10326566	3300024243	Seawater	DEINVDIKCPKCGANDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE
(restricted) Ga0233438_101532252	3300024255	Seawater	MGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE
(restricted) Ga0233439_100499481	3300024261	Seawater	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVE
(restricted) Ga0233439_104604383	3300024261	Seawater	MGMNIMGMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCD
(restricted) Ga0233444_101478493	3300024264	Seawater	MGMYDEINVDIKCPKCGSNDVSWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFKINTNVEDSFSA
(restricted) Ga0233448_100207910	3300024299	Seawater	MGMYDEINVDIKCPKCGSNEMDWQSKDYMRGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
(restricted) Ga0233434_10959332	3300024327	Seawater	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
(restricted) Ga0233445_11925531	3300024339	Seawater	GNIMGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR
(restricted) Ga0255049_103032212	3300024517	Seawater	MGMYDEINVDIKCPKCGSNDVSWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE
Ga0209250_10212416	3300025422	Marine	GMYDEINVDIKCPKCGANEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR
Ga0209685_100274511	3300025468	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAENDDAYTKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0209142_10487791	3300025545	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFTTYRRGAETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209556_10435274	3300025547	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209662_10964261	3300025596	Marine	MGMYDEINVDIKCPKCGANEKDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGAENDESVIKCRAEPYSLDEVEKMGFE
Ga0209361_10442772	3300025602	Marine	VGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209054_10477061	3300025656	Marine	DIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR
Ga0209249_10812071	3300025659	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFE
Ga0209664_11705953	3300025662	Marine	SNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGAENDESVIKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209663_11183793	3300025672	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0209657_10554785	3300025676	Marine	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEVEK
Ga0209657_11302602	3300025676	Marine	KCPKCGANDVTWQSKNYLCGLDTIDPDKVQEFYTYCDKCDTFTTYRRGEKKEEVAVECRAEPYSLDEVEKMGFKYIEDEDRS
Ga0209657_11645213	3300025676	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEK
Ga0209263_10905723	3300025681	Marine	VDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKCDGR
Ga0209140_11178133	3300025688	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209044_10133681	3300025709	Marine	MGMYDEINVDIKCPKCGANDVTWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDEAVIECRAEPYSLDEVEKMGFKYIEDED
Ga0209252_11661092	3300025719	Marine	YTGNIMGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
Ga0209709_101750091	3300027779	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPY
Ga0209502_101186412	3300027780	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEM
Ga0209091_100460517	3300027801	Marine	MGMYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVATECRAEPYSLDEVEKMGFEYIEM
Ga0209089_100377612	3300027838	Marine	MGMYDEINVDIKCPKCGANDVNWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEEKDEVVTECRAEPYSLDEVEKMGFEYIEDEEVKK
Ga0209089_102099093	3300027838	Marine	MGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRSEPYSLDEVEKMGFEYIEDEEVKKVGTE
Ga0257123_100563318	3300028174	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0257117_10611121	3300028175	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMRGLDMIDPDKVQEFYTHCDKCDTFITYSRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKC
Ga0257117_10653634	3300028175	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFEYKC
Ga0257117_11450152	3300028175	Marine	MGMYDEINVDIKCPKCGANEMGWQSKDYMCGLEMIDPDKVQKFYTHCDKCDTFITYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0257122_10313752	3300028177	Marine	MGLYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0257127_10634706	3300028189	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTETDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
Ga0257121_11936453	3300028198	Marine	MGMYDEINVDIKCPKCGSNEMDWQSKDYMCGLDMIDPDKVQEFYTYCDKCDTFTTYRRGAENDDDTYTKCRAEPYSLDEVEKMGFKYKCDNGG
Ga0257126_10543975	3300028287	Marine	MGMYDEINVDIKCPKCGSNEMNWQSKDYMCGLDMIDPDKVQKFYTHCDKCDTFITYRRGTENDEEVIKCRAEPYSLDEVEKMGFKYKCDGR
Ga0307488_100663743	3300031519	Sackhole Brine	MGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEM
Ga0307488_101827003	3300031519	Sackhole Brine	MGLYDEINVDIKCPKCGANDVTWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEYIEM
Ga0307489_103770091	3300031569	Sackhole Brine	MGMYDEINVDIKCPKCGANDVSWQSKNYMCNLDTIDPDKVQEFYTHCDKCDTFITYRRGEKKEEVATECRAEPYSLDEVEKMGFEYIEDEEVKKVGTE
Ga0314858_074947_2_259	3300033742	Sea-Ice Brine	MGMYDEINVDIKCPKCGSNDVSWQSKNYLCNLDTIDPDKVQEFYTHCDKCDTFTTYRRGEKKEEVAAECRAEPYSLDEVEKMGFEY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters