Metagenome / Metatranscriptome Family F096497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096497
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Number of Associated Samples	57
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (64.423 % of family members)
Environment Ontology (ENVO)	Unclassified (72.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (59.615 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110 1JGI20151J14362_101154401 2JGI24540J26637_101629062 3JGI26085J52751_10285451 4Ga0075109_10812501 5Ga0114995_102027992 6Ga0114995_102219292 7Ga0114996_112768252 8Ga0114998_100427851 9Ga0114998_100685402 10Ga0114998_106421941 11Ga0114997_104174351 12Ga0115007_1000063328 13Ga0115007_108907582 14Ga0115007_112712041 15Ga0115003_100166191 16Ga0115003_101122921 17Ga0115004_106221751 18Ga0115101_11897021 19Ga0115000_106788281 20Ga0115001_100722173 21Ga0115001_103736523 22Ga0115001_107459241 23Ga0115001_108775912 24Ga0133547_102043372 25Ga0138262_14846151 26Ga0138261_17713781 27Ga0182090_11409222 28Ga0181388_11702251 29Ga0181569_102601861 30Ga0181600_103561522 31Ga0181601_103068353 32Ga0181561_100083142 33Ga0181558_100163066 34Ga0222645_1014352 35Ga0222645_1032782 36Ga0222645_1249191 37Ga0222632_10690811 38Ga0222687_10443601 39Ga0222633_10305621 40Ga0222633_10326261 41Ga0222633_10388181 42Ga0222633_10433161 43Ga0255771_10122667 44Ga0222630_10029711 45Ga0222630_10519211 46Ga0222630_10613701 47Ga0222710_10799541 48Ga0209138_10989051 49Ga0209666_11901451 50Ga0209710_10439814 51Ga0209710_10871652 52Ga0209710_12697452 53Ga0209710_12717111 54Ga0209192_101351801 55Ga0209192_101397781 56Ga0209192_101642951 57Ga0209192_102950191 58Ga0209192_103407061 59Ga0209709_104003021 60Ga0209502_1000010986 61Ga0209502_100542403 62Ga0209502_102415271 63Ga0209502_104080071 64Ga0209711_100586553 65Ga0209711_101509661 66Ga0209830_100002671 67Ga0209830_100133174 68Ga0209830_101593472 69Ga0209830_102308231 70Ga0209830_102682421 71Ga0209830_103779261 72Ga0209830_104209671 73Ga0209302_102701811 74Ga0257106_10320801 75Ga0257106_11023841 76Ga0257106_11161031 77Ga0308133_10377182 78Ga0308128_10484152 79Ga0307488_105408851 80Ga0307488_108316702 81Ga0308134_10525851 82Ga0308134_11173211 83Ga0302137_10549902 84Ga0302131_10080844 85Ga0302116_10035712 86Ga0302116_11388761 87Ga0302116_11414481 88Ga0302114_101377131 89Ga0302114_103432401 90Ga0302126_101775861 91Ga0302126_102360612 92Ga0302126_102758381 93Ga0302126_103260831 94Ga0302121_101020571 95Ga0302121_101325801 96Ga0302138_100057526 97Ga0302138_100067264 98Ga0302138_101120901 99Ga0302138_102132242 100Ga0302136_11352151 101Ga0302130_12058441 102Ga0307997_100404712 103Ga0308000_104311231 104Ga0315320_107251461
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110 1JGI20151J14362_101154401 2JGI24540J26637_101629062 3JGI26085J52751_10285451 4Ga0114995_102027992 5Ga0114998_100685402 6Ga0114998_106421941 7Ga0115000_106788281 8Ga0181601_103068353
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110 1JGI20151J14362_101154401 2JGI24540J26637_101629062 3JGI26085J52751_10285451 4Ga0114995_102027992 5Ga0114998_100685402 6Ga0114998_106421941 7Ga0115000_106788281 8Ga0181601_103068353
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.42% β-sheet: 0.00% Coil/Unstructured: 31.58%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01138	RNase_PH	4.81
PF00106	adh_short	1.92
PF06418	CTP_synth_N	1.92
PF00694	Aconitase_C	1.92
PF12796	Ank_2	0.96
PF12777	MT	0.96
PF10229	MMADHC	0.96
PF08030	NAD_binding_6	0.96
PF12848	ABC_tran_Xtn	0.96
PF01148	CTP_transf_1	0.96

Showing 1 to 10 of 11 entries

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COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	4.81
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	4.81
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	4.81
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	1.92

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.54%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	13.46%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.58%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.96%
Oceanic	Environmental → Aquatic → Marine → Oceanic	67.31%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	13.46%
Strait	Environmental → Aquatic → Marine → Strait	0.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.81%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.73%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	67.31%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	13.46%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	64.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.88%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.96%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.96%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	1.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.92%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.96%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	12.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.73%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.96%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300002153	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome	Environmental	Open in IMG/M
3300003908	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M

Showing 1 to 10 of 57 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20151J14362_101154401	3300001346	Pelagic Marine	YVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS*
JGI24540J26637_101629062	3300002153	Marine	NEGAINVLRKAYVSSEMDKVGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSTINVQRLRREVQPTG*
JGI26085J52751_10285451	3300003908	Marine	VWIFKLSETSGALFGKSGMSTFVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS*
Ga0075109_10812501	3300005912	Saline Lake	GNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG*
Ga0114995_102027992	3300009172	Marine	MSTFVGNMLDPIRQPRGNEGVINILRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVR
Ga0114995_102219292	3300009172	Marine	NGGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG*
Ga0114996_112768252	3300009173	Marine	MSSFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG*
Ga0114998_100427851	3300009422	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYTYVRDLAKDGAINVQRLRRDVQPTG*
Ga0114998_100685402	3300009422	Marine	MTNGFGELFMLDKIGQPRGNEGAIIGAIIVLRKFYVSSEMDKAGAGMTAEERQALALHMRHSVNTSYKYVRDLAKDRAINVQLSRREVQPTG*
Ga0114998_106421941	3300009422	Marine	LETEKTSRTLFGRSGMSTFVGKMLDAIGQPRGNKGAINVLRKSYVSSEMDKAGTAMTAEERQALAFHMRHSVNTSYKYVRDLAKD
Ga0114997_104174351	3300009425	Marine	ARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDGAINVQRLRREVQPTG*
Ga0115007_1000063328	3300009441	Marine	LDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115007_108907582	3300009441	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0115007_112712041	3300009441	Marine	DAIGQSRGNEGAINVLRKSYVSSEMDKAGVGMTAEERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREVQPTG*
Ga0115003_100166191	3300009512	Marine	RKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115003_101122921	3300009512	Marine	LETDETSGTLFGKSGMSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAKDRAINVQRLRREVQPTG*
Ga0115004_106221751	3300009526	Marine	TFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDAAINVQRLRREVQPTS*
Ga0115101_11897021	3300009592	Marine	SGTLFGKSGMSTFVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD*
Ga0115000_106788281	3300009705	Marine	MLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSKKYVRDLTKDGAINVQRLRREV*
Ga0115001_100722173	3300009785	Marine	VPILDGDVIMTNGFGELFMLDKIGQPRGNEGAIIGAIIVLRKFYVSSEMDKAGAGMTAEERQALALHMRHSVNTSYKYVRDLAKDRAINVQLSRREVQPTG*
Ga0115001_103736523	3300009785	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG*
Ga0115001_107459241	3300009785	Marine	TLFGKSGMSTFVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV*
Ga0115001_108775912	3300009785	Marine	GKSGMSTFVGNMLDAIGQPRGNEGAINVLRESYVSSEMDKAGAGMTADERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0133547_102043372	3300010883	Marine	MSTFVGKMLDAIGQPRGNKGAINVLRKSYVSSEMDKAGTAMTAEERQALAFHMRHSVNTSYKYVRDLAKDRGINERLRREVQPTG*
Ga0138262_14846151	3300012417	Polar Marine	VLRESYVSSEMDKAGAGMTADERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG*
Ga0138261_17713781	3300012418	Polar Marine	GNEGAINFLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAINVQRLRREVQPTG*
Ga0182090_11409222	3300016797	Salt Marsh	MSTFVGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181388_11702251	3300017724	Seawater	RGNEGAINVLLKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD
Ga0181569_102601861	3300017986	Salt Marsh	MLDAIGQPRGNEGAINVLRKSYVSCEMDKAGAGMTAEERQDLAFHMRHSVNTSYKYVRDLAKDKAIDVQRLRREVRPTS
Ga0181600_103561522	3300018036	Salt Marsh	MSTFVGTMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181601_103068353	3300018041	Salt Marsh	VGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181561_100083142	3300018410	Salt Marsh	MLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0181558_100163066	3300018417	Salt Marsh	PRGNEDAINVLRKSCVSSEMDKAGAGMTSEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0222645_1014352	3300022833	Saline Water	MSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0222645_1032782	3300022833	Saline Water	MSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAKDRAINVQRLRREVQPTG
Ga0222645_1249191	3300022833	Saline Water	NEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDRAINVQRLRREVQPTG
Ga0222632_10690811	3300022842	Saline Water	FVGNMLDTIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQRLQREVQPTG
Ga0222687_10443601	3300022844	Saline Water	KTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10305621	3300022847	Saline Water	TFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10326261	3300022847	Saline Water	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222633_10388181	3300022847	Saline Water	KSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYVRKLAKDGAINVQRLRREVQPTG
Ga0222633_10433161	3300022847	Saline Water	TINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQHLRREVQPTG
Ga0255771_10122667	3300022900	Salt Marsh	SGTLFGKSGMSTFVGNMLDTIGQPRGNEDAINVLRKSCVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVR
Ga0222630_10029711	3300023243	Saline Water	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSFKYVRDLAKDRAINVQRLRREVQPTG
Ga0222630_10519211	3300023243	Saline Water	FGKSGMSTFVGNMLDAIGQSRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0222630_10613701	3300023243	Saline Water	GAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSAINVQHLRREVQPTG
Ga0222710_10799541	3300023429	Saline Water	ARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209138_10989051	3300025617	Marine	LRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTS
Ga0209666_11901451	3300025870	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLDAIEQSRGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0209710_10439814	3300027687	Marine	INVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRRE
Ga0209710_10871652	3300027687	Marine	GNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209710_12697452	3300027687	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209710_12717111	3300027687	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDSTINVQRLRREVQPTG
Ga0209192_101351801	3300027752	Marine	MSTFVGNMLDPIRQPRGNEGVINILRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRYLAKDR
Ga0209192_101397781	3300027752	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0209192_101642951	3300027752	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDEAINVQRLRREVQPTG
Ga0209192_102950191	3300027752	Marine	GKSGMSTFVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV
Ga0209192_103407061	3300027752	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLNAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTS
Ga0209709_104003021	3300027779	Marine	SGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDGAINVQRLRREVQPTG
Ga0209502_1000010986	3300027780	Marine	MSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209502_100542403	3300027780	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0209502_102415271	3300027780	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209502_104080071	3300027780	Marine	LLETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209711_100586553	3300027788	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209711_101509661	3300027788	Marine	MSTFVGKMLDAIGQVRGNEGAINVLRKSYVSSVLDKAGAGMTADERQALAFHMRHSVTTSYKYVRDLAK
Ga0209830_100002671	3300027791	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_100133174	3300027791	Marine	ETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0209830_101593472	3300027791	Marine	RGNGGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_102308231	3300027791	Marine	FGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_102682421	3300027791	Marine	RGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0209830_103779261	3300027791	Marine	ETDKTSGTLFGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDSTINVQRLRREVQPTG
Ga0209830_104209671	3300027791	Marine	FVGNMLDAIEQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDGAINVQRLRREV
Ga0209302_102701811	3300027810	Marine	GQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0257106_10320801	3300028194	Marine	MSTFVGNMLDAIGQPRGNEGAINVLRKSCVSSEMDKAGTGMTAEERQALSFHMRNSVNTSYKYVRDLAKDRVINVLRLRREVQLTG
Ga0257106_11023841	3300028194	Marine	YVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0257106_11161031	3300028194	Marine	RGNEGAINVHRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVQPTG
Ga0308133_10377182	3300030721	Marine	GMSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0308128_10484152	3300030725	Marine	YVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0307488_105408851	3300031519	Sackhole Brine	YVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDVAINVQRLRREVQPTG
Ga0307488_108316702	3300031519	Sackhole Brine	YVSSEMDKAGAGMTTDERQALAFHMRHSVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0308134_10525851	3300031579	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0308134_11173211	3300031579	Marine	AIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302137_10549902	3300031588	Marine	KTSGTLFGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302131_10080844	3300031594	Marine	LETDKTSGTLFGKYGMSTFVGNMLDDIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0302116_10035712	3300031597	Marine	MSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRIRREVQPTS
Ga0302116_11388761	3300031597	Marine	GMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYIRDLTKDSAINVQRLRREVRPTG
Ga0302116_11414481	3300031597	Marine	LDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREV
Ga0302114_101377131	3300031621	Marine	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAQDGAINVQRLRREVQPTG
Ga0302114_103432401	3300031621	Marine	FGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302126_101775861	3300031622	Marine	GAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_102360612	3300031622	Marine	NVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_102758381	3300031622	Marine	INVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRREVQPTG
Ga0302126_103260831	3300031622	Marine	SGTLFGKSGMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302121_101020571	3300031626	Marine	NKLLETDKTSGTLFGKSGMSTFVGNMLNAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLAKDGAINVQRLRRDVQPTG
Ga0302121_101325801	3300031626	Marine	VSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDRAINVQRVRREVQPTG
Ga0302138_100057526	3300031637	Marine	DAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHLVNTSNKYVRDLAKDRVINVQRLRRDVQPTG
Ga0302138_100067264	3300031637	Marine	IGQPRGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKFVRDLAKDRVINVQRLRRDVQPTG
Ga0302138_101120901	3300031637	Marine	MLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302138_102132242	3300031637	Marine	AINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSLKYVRDLAKDGAINVQRLRREVQPTG
Ga0302136_11352151	3300031676	Marine	FGKSGMSTFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0302130_12058441	3300031700	Marine	TFVGNMLDAIGQARGNEGAINVLRKSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTINVQRLRREVQPTG
Ga0307997_100404712	3300031706	Marine	RKSYVSSEMDKAGAGMTADERQALAFHMRHSVNTSFKYVRDLAKDRAINVQRLRREVQPT
Ga0308000_104311231	3300031848	Marine	GMSTFVGNMLDAIGQPRGNEGAINVLRKSYVSSEMDKAGTGMTAEERQALAFHMRHSVNTSYKYVRDLTKDSTIDVQRLRHEVQPTS
Ga0315320_107251461	3300031851	Seawater	KSYVSSEMDKAGAGMTAEERQALAFHMRHSVNTSYKYVRDLAKDRAVNVQRLRREVQPTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences