Basic Information | |
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Family ID | F096345 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 63 residues |
Representative Sequence | GESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Number of Associated Samples | 78 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 20.19 % |
% of genes from short scaffolds (< 2000 bps) | 19.23 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (79.808 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (73.077 % of family members) |
Environment Ontology (ENVO) | Unclassified (94.231 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (75.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.79% β-sheet: 4.76% Coil/Unstructured: 44.44% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Salt Marsh Salt Marsh Sediment Tropical Forest Soil Soil Soil Tropical Forest Soil Tropical Rainforest Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066388_1009530221 | 3300005332 | Tropical Forest Soil | GLISSIAGESGDKLIIVETWESREHQEKFLHDQLGPALAQAGAAEPCRVEWFSGVIDFHLQ* |
Ga0008090_101576832 | 3300005363 | Tropical Rainforest Soil | PGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG* |
Ga0066903_1069022291 | 3300005764 | Tropical Forest Soil | APGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHTQLGPALAEANAAHPFRVEWFTEVIDFTCTKRPSGSLAG* |
Ga0126369_100283611 | 3300012971 | Tropical Forest Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHTQLGPALAEANAAHPSRVEWFTEVIDFTCTKRPSGSLAG* |
Ga0182036_100242165 | 3300016270 | Soil | ESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0182041_120586381 | 3300016294 | Soil | VVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0182033_119464551 | 3300016319 | Soil | ESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0182035_102644071 | 3300016341 | Soil | IAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAETKAAHPFRVEWFTEVIDFTCTTRPSGSLAG |
Ga0182035_105605951 | 3300016341 | Soil | ISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0182032_107870223 | 3300016357 | Soil | EGLISSIAGESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0182034_110936461 | 3300016371 | Soil | ESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTTRPSGSLAGQLIPEPRGGM |
Ga0182039_115402673 | 3300016422 | Soil | SGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLA |
Ga0307441_10549601 | 3300031276 | Salt Marsh | EVRLEGLISSIAGESGDKLIVVEAWESKAHQEKFMHDQLGPALAEAKVAPPTRVEWFSGVIDFHLG |
Ga0318534_100181431 | 3300031544 | Soil | LISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318534_101440071 | 3300031544 | Soil | LISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318541_102026651 | 3300031545 | Soil | IAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318541_103973752 | 3300031545 | Soil | VVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318538_100726583 | 3300031546 | Soil | ESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318528_105984341 | 3300031561 | Soil | DSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318573_106866991 | 3300031564 | Soil | DSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0318515_106724542 | 3300031572 | Soil | VEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0310915_103572131 | 3300031573 | Soil | PEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318555_103864341 | 3300031640 | Soil | SGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLT |
Ga0318542_104916272 | 3300031668 | Soil | SIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318542_105478842 | 3300031668 | Soil | GESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTTPSGSLAG |
Ga0318561_100877103 | 3300031679 | Soil | GAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318574_102284091 | 3300031680 | Soil | IAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318572_105830952 | 3300031681 | Soil | DSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318560_104070463 | 3300031682 | Soil | LIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0315536_11896722 | 3300031692 | Salt Marsh Sediment | SSIAGGSSDKLIVVETWESKAHQERFMQNQLGPALAEAKAVPPSRVEWFDGVIDFHLN |
Ga0318493_107869202 | 3300031723 | Soil | RPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTDVINFTCTTRPSGSLAG |
Ga0318501_100100724 | 3300031736 | Soil | GESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0306918_110117861 | 3300031744 | Soil | LISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318502_106305171 | 3300031747 | Soil | DGAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPTRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318502_106994291 | 3300031747 | Soil | WDGAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318492_103891591 | 3300031748 | Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318494_100492591 | 3300031751 | Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318494_102855151 | 3300031751 | Soil | ISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318537_101838061 | 3300031763 | Soil | DSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTTRPSGSLAGQLIPEPRGGM |
Ga0318535_104298012 | 3300031764 | Soil | EAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318554_106468072 | 3300031765 | Soil | ISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318509_107221282 | 3300031768 | Soil | DTRELQEKFMHSQLGPALAEAKAAPPSRVEWFTEVIDFTCTTRPSGSLAGQLIPEPRGGM |
Ga0318521_103343913 | 3300031770 | Soil | SIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318521_105714771 | 3300031770 | Soil | GWDGAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318521_107035242 | 3300031770 | Soil | PEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTTPSGSLAG |
Ga0318521_107982422 | 3300031770 | Soil | RPEGLISSIAGESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAHPSRVEWFTEVINFTCTTRPSGSLAG |
Ga0318546_101211833 | 3300031771 | Soil | SSIAGESGDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318546_103770263 | 3300031771 | Soil | VEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318543_102608121 | 3300031777 | Soil | LQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318498_100052711 | 3300031778 | Soil | IVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318498_103333833 | 3300031778 | Soil | EAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318552_100075945 | 3300031782 | Soil | MGRRARSEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318552_102906961 | 3300031782 | Soil | GDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318529_104023401 | 3300031792 | Soil | GDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTARPSGSLAG |
Ga0318548_102367181 | 3300031793 | Soil | SRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTARPSGSLAG |
Ga0318548_102517961 | 3300031793 | Soil | EKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318557_101331443 | 3300031795 | Soil | IAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318550_104714982 | 3300031797 | Soil | SRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318523_100866053 | 3300031798 | Soil | GDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318523_101514253 | 3300031798 | Soil | RELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0318565_102549221 | 3300031799 | Soil | AWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318497_101756963 | 3300031805 | Soil | SRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318568_101136991 | 3300031819 | Soil | GWDGAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTDVINFTCTTRPSGSLAG |
Ga0318568_109343061 | 3300031819 | Soil | AWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318567_100117501 | 3300031821 | Soil | AGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318564_103592441 | 3300031831 | Soil | QASTTISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318499_100637711 | 3300031832 | Soil | GDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318517_100317141 | 3300031835 | Soil | LQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0318511_101080461 | 3300031845 | Soil | GDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0306919_103983753 | 3300031879 | Soil | DSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0306919_108309502 | 3300031879 | Soil | EAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0306919_111820811 | 3300031879 | Soil | IAGESGDKLIVVEAWDSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGGM |
Ga0318544_103028031 | 3300031880 | Soil | SSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0306925_105099091 | 3300031890 | Soil | DKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318536_104358801 | 3300031893 | Soil | RELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318551_108450391 | 3300031896 | Soil | GLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTDVINFTCTTRPSGSLAG |
Ga0318520_102578603 | 3300031897 | Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318520_104502901 | 3300031897 | Soil | DKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTARPSGSLAG |
Ga0306923_100984745 | 3300031910 | Soil | GESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0306921_103191391 | 3300031912 | Soil | ELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0306921_103464843 | 3300031912 | Soil | EGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSAAWPDN |
Ga0310909_105468241 | 3300031947 | Soil | KLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0306926_100608141 | 3300031954 | Soil | AWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318531_103653752 | 3300031981 | Soil | EGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0306922_105376261 | 3300032001 | Soil | PGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0306922_106990761 | 3300032001 | Soil | ISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTARPSGSLAG |
Ga0306922_115103523 | 3300032001 | Soil | EKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLTG |
Ga0318563_100671461 | 3300032009 | Soil | ISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0310911_107301282 | 3300032035 | Soil | EVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0318559_100312104 | 3300032039 | Soil | WDSRELQEKFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTTRPSGSLAGQLIPEPRGG |
Ga0318545_101122771 | 3300032042 | Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318545_102350131 | 3300032042 | Soil | LISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318506_103164911 | 3300032052 | Soil | SSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318570_101363081 | 3300032054 | Soil | DKLIVVEAWDSRELQEKVMHSQLGPALAEAKAAHPFRVEWFTEVIDFTCTKRPSGSLTG |
Ga0318570_101888451 | 3300032054 | Soil | VVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318570_102743233 | 3300032054 | Soil | IVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKQPSGNLAG |
Ga0318510_100663391 | 3300032064 | Soil | LAWDGAPGPEVRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318513_100391591 | 3300032065 | Soil | VRPEGLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTNRPSGSLAG |
Ga0318513_102125003 | 3300032065 | Soil | AWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTARPSGSLAG |
Ga0318524_100733183 | 3300032067 | Soil | AWDSRELQEKFMHSQLGPALAEANAAHPSRVEWFTEVIDFTCTTRPSGSLAG |
Ga0306924_110016593 | 3300032076 | Soil | GLISSIAGESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0306924_110810181 | 3300032076 | Soil | WDSRELQEQFMRSQLGPALAEAKAAPPSRVEWFTEVIDFTCTKRPSGSLAGQLIPEPRGG |
Ga0318525_105384432 | 3300032089 | Soil | GESGDKLIVVEAWDSRELQEKFMHSQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
Ga0318519_108209442 | 3300033290 | Soil | ESGDKLIVVEAWDSRELQEKFMHTQLGPALAEAKAAHPSRVEWFTEVIDFTCTKRPSGSLAG |
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