Metagenome Family F096310

Overview

Basic Information

• Family ID: F096310
• Family Type: Metagenome
• Number of Sequences: 104
• Average Sequence Length: 41 residues
• Representative Sequence: MSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKIN
• Number of Associated Samples: 15
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 69.90 %
• % of genes near scaffold ends (potentially truncated): 17.31 %
• % of genes from short scaffolds (< 2000 bps): 37.50 %
• Associated GOLD sequencing projects: 15
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (70.192 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (84.615 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Unclassified (66.346 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 55.71%
  β-sheet: 0.00%
  Coil/Unstructured: 44.29%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01842	ACT	1.92
PF04885	Stig1	1.92
PF03152	UFD1	0.96
PF04116	FA_hydroxylase	0.96
PF02535	Zip	0.96
PF00847	AP2	0.96
PF00078	RVT_1	0.96
PF13963	Transpos_assoc	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.96
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
All Organisms	root	All Organisms	29.81 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
cellular organisms	root	All Organisms → cellular organisms	28.85 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	28.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	21.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	21.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 16

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 17

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 18

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Malpighiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 19

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Salicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae	9.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 20

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Saliceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 21

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Populus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	6.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Level 22

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.19 %
Populus trichocarpa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	3.85 %
Populus alba	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus alba	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300028786|Ga0307517_10008442	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	14780
3300028786|Ga0307517_10009711	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	13600
3300028786|Ga0307517_10013984	Not Available	10833
3300028786|Ga0307517_10029420	All Organisms → cellular organisms → Eukaryota	6487
3300028786|Ga0307517_10035103	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5687
3300028786|Ga0307517_10043780	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4756
3300028786|Ga0307517_10044827	Not Available	4665
3300028786|Ga0307517_10046881	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus alba	4495
3300028786|Ga0307517_10053095	Not Available	4044
3300028786|Ga0307517_10056122	Not Available	3849
3300028786|Ga0307517_10091775	Not Available	2477
3300028786|Ga0307517_10109060	Not Available	2120
3300028786|Ga0307517_10119334	Not Available	1958
3300028786|Ga0307517_10138139	Not Available	1723
3300028786|Ga0307517_10158866	Not Available	1524
3300028786|Ga0307517_10168462	Not Available	1447
3300028786|Ga0307517_10179924	Not Available	1367
3300028786|Ga0307517_10227744	Not Available	1123
3300028786|Ga0307517_10248770	Not Available	1045
3300028794|Ga0307515_10032872	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	8568
3300028794|Ga0307515_10045203	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae	6772
3300028794|Ga0307515_10046670	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	6614
3300028794|Ga0307515_10067098	Not Available	4954
3300028794|Ga0307515_10072622	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	4638
3300028794|Ga0307515_10077997	Not Available	4365
3300028794|Ga0307515_10087096	Not Available	3970
3300028794|Ga0307515_10093777	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3717
3300028794|Ga0307515_10138358	Not Available	2629
3300028794|Ga0307515_10142752	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	2557
3300028794|Ga0307515_10144464	Not Available	2529
3300028794|Ga0307515_10171116	Not Available	2164
3300028794|Ga0307515_10194099	Not Available	1929
3300028794|Ga0307515_10216393	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	1745
3300028794|Ga0307515_10223883	Not Available	1691
3300028794|Ga0307515_10845178	Not Available	541
3300030521|Ga0307511_10047039	Not Available	3537
3300030521|Ga0307511_10100965	Not Available	1895
3300030521|Ga0307511_10108347	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	1783
3300030521|Ga0307511_10110066	Not Available	1757
3300030521|Ga0307511_10133204	Not Available	1489
3300030521|Ga0307511_10341603	Not Available	649
3300030521|Ga0307511_10383499	Not Available	586
3300030522|Ga0307512_10177844	Not Available	1203
3300030522|Ga0307512_10206565	Not Available	1052
3300030522|Ga0307512_10290903	Not Available	771
3300031456|Ga0307513_10009746	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	12132
3300031456|Ga0307513_10039911	Not Available	5197
3300031456|Ga0307513_10042796	Not Available	4981
3300031456|Ga0307513_10065382	Not Available	3826
3300031456|Ga0307513_10085112	Not Available	3245
3300031456|Ga0307513_10142885	All Organisms → cellular organisms → Eukaryota	2316
3300031456|Ga0307513_10189041	Not Available	1913
3300031456|Ga0307513_10228631	Not Available	1674
3300031456|Ga0307513_10233525	Not Available	1650
3300031456|Ga0307513_10238336	Not Available	1626
3300031456|Ga0307513_10483691	Not Available	957
3300031456|Ga0307513_10768850	Not Available	669
3300031507|Ga0307509_10091132	All Organisms → cellular organisms → Eukaryota	3121
3300031507|Ga0307509_10129665	Not Available	2480
3300031507|Ga0307509_10155415	Not Available	2194
3300031507|Ga0307509_10210254	All Organisms → Viruses → Predicted Viral	1771
3300031507|Ga0307509_10255026	Not Available	1534
3300031507|Ga0307509_10810938	Not Available	600
3300031616|Ga0307508_10029239	Not Available	4983
3300031616|Ga0307508_10036227	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4443
3300031616|Ga0307508_10123507	All Organisms → cellular organisms → Eukaryota	2191
3300031616|Ga0307508_10679259	Not Available	637
3300031649|Ga0307514_10034028	All Organisms → cellular organisms → Eukaryota	4061
3300031649|Ga0307514_10043012	Not Available	3549
3300031649|Ga0307514_10138216	Not Available	1662
3300031730|Ga0307516_10087605	Not Available	2947
3300031730|Ga0307516_10093171	Not Available	2838
3300031730|Ga0307516_10102873	Not Available	2670
3300031730|Ga0307516_10106094	Not Available	2620
3300031730|Ga0307516_10221757	Not Available	1599
3300031730|Ga0307516_10430733	Not Available	976
3300031730|Ga0307516_10549665	Not Available	808
3300031838|Ga0307518_10029934	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3941
3300031838|Ga0307518_10042444	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	3310
3300031838|Ga0307518_10080466	Not Available	2352
3300031838|Ga0307518_10172531	Not Available	1472
3300032354|Ga0325403_1015952	Not Available	6983
3300032354|Ga0325403_1017324	Not Available	6658
3300032354|Ga0325403_1020562	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5964
3300032354|Ga0325403_1034702	Not Available	4079
3300032354|Ga0325403_1044826	Not Available	3263
3300032354|Ga0325403_1045440	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3221
3300032354|Ga0325403_1066305	Not Available	2136
3300032355|Ga0325401_1002936	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	15388
3300032355|Ga0325401_1003897	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	13865
3300032355|Ga0325401_1089038	Not Available	1803
3300032389|Ga0325405_1002476	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	18997
3300032389|Ga0325405_1017213	Not Available	6537
3300032389|Ga0325405_1025302	Not Available	4898
3300032389|Ga0325405_1038115	Not Available	3392
3300032389|Ga0325405_1040384	All Organisms → cellular organisms → Eukaryota	3196
3300032389|Ga0325405_1053920	Not Available	2305
3300033179|Ga0307507_10559193	Not Available	601
3300033180|Ga0307510_10054142	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4208
3300033180|Ga0307510_10076180	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	3301
3300033180|Ga0307510_10094258	Not Available	2820
3300033180|Ga0307510_10171293	Not Available	1749
3300033180|Ga0307510_10456723	Not Available	718

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Category

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	84.62%
Wood	Host-Associated → Plants → Wood	15.38%

Type

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	84.62%
Unclassified	Host-Associated → Plants → Wood → Unclassified	15.38%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	84.62%
Unclassified	Host-Associated → Plants → Wood → Unclassified → Unclassified	15.38%

Habitat

Habitat	Taxonomy	Distribution
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	84.62%
Xylem	Host-Associated → Plants → Wood → Unclassified → Unclassified → Xylem	15.38%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated
3300030522	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM	Host-Associated
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated
3300031649	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM	Host-Associated
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated
3300031838	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM	Host-Associated
3300032354	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R4	Host-Associated
3300032355	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R2	Host-Associated
3300032389	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R2	Host-Associated
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0307517_1000844213	3300028786	Ectomycorrhiza	MTLIVRPRYSYKKQIKINYEIQFPTDPMLNDKIEKKSIK
Ga0307517_1000971111	3300028786	Ectomycorrhiza	MPKLLTLILRLRYSNKKQIKIDYKTQFPTNPMLNDKIKKN
Ga0307517_100139842	3300028786	Ectomycorrhiza	MSKPVTLIIRLRYSLEKQIKIMNEAQFPTDPMLNDKI
Ga0307517_100294203	3300028786	Ectomycorrhiza	MSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKSIK
Ga0307517_100351034	3300028786	Ectomycorrhiza	MPKHLTLILKSRYSPKKQIKINYKAQFSIDPMLNDKIKNKIN
Ga0307517_100437803	3300028786	Ectomycorrhiza	MSKPITLILRQIYSHKKQIKIDYETQFSTDPMLNDTILKKSIK
Ga0307517_100448273	3300028786	Ectomycorrhiza	MVKIPKLMTLIARLRYSNKKQIKTYYKTQFSTDPVLNDKIF
Ga0307517_100468812	3300028786	Ectomycorrhiza	MTLILRPKYSHKKQIKIDYETQFLTDLMLNDKIEKKSIK
Ga0307517_100530952	3300028786	Ectomycorrhiza	MPKPVTLILSPEYSHKKQIKIYYEVQFPTDRMLNDKIEKK
Ga0307517_100561221	3300028786	Ectomycorrhiza	MLKLVTLILRPIYSHKKQIKIDYEAQFPTNPMLNNKIKKKIN
Ga0307517_100917751	3300028786	Ectomycorrhiza	MLKPVILIVRQKYFYKKQIKTDYETQFPTDPMLNDKIEKKIN
Ga0307517_101090601	3300028786	Ectomycorrhiza	MSKLVTLILRPRYSYKKQTKIDYETQFPTDSMFNDRIEKKSIK
Ga0307517_101193342	3300028786	Ectomycorrhiza	MVKMLKLVTLIVRQRYSYKNQIKIDYEAQFPTDLMLNDKIKNKIN
Ga0307517_101381391	3300028786	Ectomycorrhiza	MPKLVTMILKPRYSPKKQIKIDYETQFSTNPILNDKIGKKSIK
Ga0307517_101588661	3300028786	Ectomycorrhiza	MSKLVTLIVRPKYSHKKQIKTNYETQFSTDLILNDKIEKKIN
Ga0307517_101684621	3300028786	Ectomycorrhiza	MPKLMTLILKPRYSHKKQIKIDYEAQFPTDPMLNDKIK
Ga0307517_101799241	3300028786	Ectomycorrhiza	MPKPAALIMRSRYPYRKQIKIDYETQFPTDPMLND
Ga0307517_102277442	3300028786	Ectomycorrhiza	MIXFKQGXMPKPVTMILKPRYSPKKQIKIDYETQFPTDPMLNDKIEKKIN
Ga0307517_102487701	3300028786	Ectomycorrhiza	VKMPKSMTLILRPRYSHKKQIKTDYEAQFPTDPMLNDKIK
Ga0307515_100328729	3300028794	Ectomycorrhiza	MIXFKQGXMPKPVTMILKPRYSPKKQIKIDYETQFSTDPMLNDKIGKKSIK
Ga0307515_100452034	3300028794	Ectomycorrhiza	MSKLVTLIVRPIYSHKKHIQMDYEAQFSTDPMVNDKTLLQYIFC
Ga0307515_100466708	3300028794	Ectomycorrhiza	MPKLVTLILKPRYSHKKQIKIDYEAQFSTDPMLNDKIK
Ga0307515_100670982	3300028794	Ectomycorrhiza	MVKIPKLMTLIARLKYSNKKQIKTYYKTQFSTNPVLNDKILKKIN
Ga0307515_100726224	3300028794	Ectomycorrhiza	MSKLVTLILRPKYSHKKQIKTNYETQFSTDLILNDKLKKIN
Ga0307515_100779971	3300028794	Ectomycorrhiza	MSKLVTLIVRPKYSNKKQIKTDYKAQFPTDPMLNDKIKKQIN
Ga0307515_100870963	3300028794	Ectomycorrhiza	MSKLVTLILKPRYSYKKQIKIDYETQFPTDSMFNDRIEKKIN
Ga0307515_100937771	3300028794	Ectomycorrhiza	MSKPVTLILRQIYSHKKQIKIDYETQFSTDPMLNDTILKKSIK
Ga0307515_101383582	3300028794	Ectomycorrhiza	MPKLVTLILRPRYSYKKQIKIDYETQFPTDQILNDKIKKKTSIK
Ga0307515_101427521	3300028794	Ectomycorrhiza	MTMILKPRYSPKKQIKIDYETQFPTDPMLNDKIGKKIN
Ga0307515_101444641	3300028794	Ectomycorrhiza	MPKLVTLILKPRYSHKKQIKIDYEAQFPTDPMLNDKIK
Ga0307515_101711161	3300028794	Ectomycorrhiza	MPKFMTLILRPRYSHKKQIKTDYEAQFPTDPMLNDKIERKTIK
Ga0307515_101940991	3300028794	Ectomycorrhiza	MSKPVTLIIRLRYSLEKQIKINYEAQFPTDPMLNDKI
Ga0307515_102163931	3300028794	Ectomycorrhiza	MLKPVTLILKPRYSHKKQIKIDYEAQFSTNLMLNDKIEKK
Ga0307515_102238831	3300028794	Ectomycorrhiza	MPKLLTLILRLRYSNKKQIKTDYKTQFPTNPMLNDKIKKKLIK
Ga0307515_108451781	3300028794	Ectomycorrhiza	MPKLVTLILRPKYSYKKQIKIDYETQFPTDQILNDKIKKKTSIK
Ga0307511_100470392	3300030521	Ectomycorrhiza	MPKLLTLILRLRYSNKKQIKTDYKTQFPTNPMLNDKIKKN
Ga0307511_101009652	3300030521	Ectomycorrhiza	MPKSMTLILRPRYSHKKQIKTDYEAQFPTDPMLNDKIEKKQ
Ga0307511_101083472	3300030521	Ectomycorrhiza	MLKLVTLILKPRYSHKKQLKIDYETQFSTDPMLNDKIEKKSIK
Ga0307511_101100661	3300030521	Ectomycorrhiza	MPKPVTMILKPRYSPKKQIKIDYETQFSTDPMLNDKIGKKSIK
Ga0307511_101332041	3300030521	Ectomycorrhiza	TLILRLRYSYKKQTKIDYETQFPTDSMFNDRIEKKIN
Ga0307511_103416031	3300030521	Ectomycorrhiza	LKRVTLILRPRYSHKKQIKIDYEIQFPTDPMLNDKIKKKIN
Ga0307511_103834991	3300030521	Ectomycorrhiza	SVTLVMRPIYHHKKQIKIDYKVQFSTNPILNDKIRKSQLRK
Ga0307512_101778441	3300030522	Ectomycorrhiza	MPKLVTLILKLRYSHKKQIKIDYEAQFSTDPMLNDKIK
Ga0307512_102065652	3300030522	Ectomycorrhiza	MPKPVTLILRPIYSHKKQIKIDYEAQFSTDRMLNDKIKKIIIK
Ga0307512_102909031	3300030522	Ectomycorrhiza	MVKIPKLMTLIARLRYSNKKQIKTYYKTQFSTDPVLNDKILKKIN
Ga0307513_1000974612	3300031456	Ectomycorrhiza	MLKLVTLIVRPKYSNKKQIKTDYEAQFPTDPMLNDKIKKQIN
Ga0307513_100399111	3300031456	Ectomycorrhiza	MTLILRPKYSYKKQIKIDYEAQFLTDLMLNDKIKKN
Ga0307513_100427961	3300031456	Ectomycorrhiza	MPKPVTLILSPEYSHKKQIKIYYEAQFPTDRMLNDKIEKK
Ga0307513_100653822	3300031456	Ectomycorrhiza	MLKLVTLIVRQRYSHKNQIKIDYEAQLPTDLMLNDKIKNKIN
Ga0307513_100851123	3300031456	Ectomycorrhiza	MPKLVTLILRPRYSYKKQIKIDYETQFPTDQILNDKIKKKNIN
Ga0307513_101428851	3300031456	Ectomycorrhiza	MSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKK
Ga0307513_101890411	3300031456	Ectomycorrhiza	VKMLKLVTLILRPIYSHKKQIKIDYEAQFPTNPMLNNKIKKKFN
Ga0307513_102286312	3300031456	Ectomycorrhiza	VKMSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKLIK
Ga0307513_102335251	3300031456	Ectomycorrhiza	VKMSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKSIK
Ga0307513_102383361	3300031456	Ectomycorrhiza	MPKPVTLILRPIYSHKKQIKIAYEAQFSTDRMLNDKIKKIIIK
Ga0307513_104836911	3300031456	Ectomycorrhiza	MLKLVTLILRPIYSHKKQIKIDYEAQFPTNPMLNN
Ga0307513_107688501	3300031456	Ectomycorrhiza	TLILRPRYSHKKQIKIDYKARFLTDSILNNKIKNKIN
Ga0307509_100911321	3300031507	Ectomycorrhiza	MSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEK
Ga0307509_101296651	3300031507	Ectomycorrhiza	MVKMSKPVTLILRQIYSHKKQIKIDYETQFSTDPMLNDTILKKSIK
Ga0307509_101554151	3300031507	Ectomycorrhiza	MIXFKQGXMPKPMTMILKPRYSPKKQIKIDYETQFPTDPMLNDKIEKKIN
Ga0307509_102102541	3300031507	Ectomycorrhiza	MSKLMTLILRTRCSHKKLIKIDYEVQFPTDQMLNDNFLKKTN
Ga0307509_102550261	3300031507	Ectomycorrhiza	MPKLLTLILRLRYSNKKQIKIDYKTQFPTNPILNDKIKKN
Ga0307509_108109381	3300031507	Ectomycorrhiza	RVKMSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKIN
Ga0307508_100292392	3300031616	Ectomycorrhiza	MPKLVTLILRPRYSHKKQIKIDYKARFLTDSILNDKIKNKIN
Ga0307508_100362272	3300031616	Ectomycorrhiza	MPKHLILILKSRYSPKKQIKINYKAQFSIDPMLNDKIKNKIN
Ga0307508_100424593	3300031616	Ectomycorrhiza	MTLILRPRYSHKRQTKIDYEAQFSTDLMLNDKIKKKLNKRQKKTT
Ga0307508_101235072	3300031616	Ectomycorrhiza	MSKLVTLILRPIYSHKKQIKIDYETQFLTDPMLNDKIEKKIN
Ga0307508_106792591	3300031616	Ectomycorrhiza	MTLIVRPRYSHKKHIKTNYEAQLSTNLILNDKIKKI
Ga0307514_100340282	3300031649	Ectomycorrhiza	MSKLVTLILKPRYSHKNQMKIDYEAHFLTDLMLNDKIFKKSIK
Ga0307514_100430122	3300031649	Ectomycorrhiza	MPKLLTLILRLRYSHKKQIKIDYKTQFPTNPMLNDKIKKN
Ga0307514_101382161	3300031649	Ectomycorrhiza	MSKLVTLIMRPKYSNKKQIKTDYKAQFPTDPMLNDKIKKQIN
Ga0307516_100876052	3300031730	Ectomycorrhiza	MPKFMTLILRPRYSHKKQIKTDYEAQFPTDPMLNDKIEKKQ
Ga0307516_100931711	3300031730	Ectomycorrhiza	MSKLVTLILKLRYSHKKQIKIDYEAQFSTDPMLNDKIK
Ga0307516_101028732	3300031730	Ectomycorrhiza	MPKSMTLILRPRYSHKKQIKTDYEAQFPTDPMLNDKIK
Ga0307516_101060941	3300031730	Ectomycorrhiza	MSKPVTLIXRPRYPHKKQIKIDYEAQFPIDQMFNDKFF
Ga0307516_102217571	3300031730	Ectomycorrhiza	MLKPVTLILKPRYSHKKQIKIDYEAQFSTNLMLNDKI
Ga0307516_104307331	3300031730	Ectomycorrhiza	MSKPTTFIMKPRYLQKKQIKTKYKVQSPTDPMLND
Ga0307516_105496651	3300031730	Ectomycorrhiza	LDLTEVKMSKPTTFIMKPRYLQKKQIKTKYKVQSPTDPMLNDKIE
Ga0307518_100299342	3300031838	Ectomycorrhiza	MPKFMTLILRPRYSHKKQIKTDYEAQFPTNPMLNDKIERKTIK
Ga0307518_100424441	3300031838	Ectomycorrhiza	MTLILRPRYSHKKQIKIDYEAQFATDPILNDKIKKKSIK
Ga0307518_100804662	3300031838	Ectomycorrhiza	MPKPVTMILKPRYSPKKQIKIDYKTQFPTDPMLNDKIGKKIN
Ga0307518_101725311	3300031838	Ectomycorrhiza	MPKLMTLILRPRILIKKQIKIDYEAQFPTDQILNDKIEKKIN
Ga0325403_10159524	3300032354	Xylem	MPKIITLILRSRYSHKKQSKTDYEAQFPIDPMLNDKIEKKIN
Ga0325403_10173241	3300032354	Xylem	MSKLVTLILKPRYSHKKQIKIDYETQFTNDPMLNDKIK
Ga0325403_10205622	3300032354	Xylem	MLKLVTLILKPRYSYKKQLKIDYETQFSTDPMLNDKIKKN
Ga0325403_10347022	3300032354	Xylem	MPKLITLILRPRYSHKKQIKIDHETQFSTDQILNDEIEKKIN
Ga0325403_10448261	3300032354	Xylem	MPKPVTLILRPKYSHKNKIKIYHEPQFLTDSMSNDKIKKN
Ga0325403_10454403	3300032354	Xylem	MSKLVTLILKPRYSHKKQIKIDYETQFPNDPMLNDKIK
Ga0325403_10663052	3300032354	Xylem	MPKLVTLIVKLRYSHKKIKTDYEDQFSTNPILNFKIKKN
Ga0325401_10029369	3300032355	Xylem	MLKLMVLILRPRYSYKKQIKIDYETQFSTYPLLNDKIEKNN
Ga0325401_10038978	3300032355	Xylem	MPKHVTLILRPRYSYKKEVKIDYETQFPTNPILNDKIENKSIK
Ga0325401_10890381	3300032355	Xylem	MPKLVNLILRPIYSYKKQIKIDYETQFPTDSMFNDRIEKKSIK
Ga0325405_10024768	3300032389	Xylem	MPKLVTLIVRPRYSYKKQIKINHKAQFSTDPVLNDKILKKSIK
Ga0325405_10172134	3300032389	Xylem	MPKIITLILRSRYSHKKQSKTDYEAQFPIDSMLNDKIEKKIN
Ga0325405_10253025	3300032389	Xylem	MPKLVTLIVRPRYTHKKQIKINYETQFSTDPMLNNKIKKSIK
Ga0325405_10381151	3300032389	Xylem	MILILRLRYSHQKQIKIDYEAQFPTDQILNDKIEKKIN
Ga0325405_10403841	3300032389	Xylem	MSKLVTLILKPRYSHKKQIKIDYEAQFPNDPMLNDKIK
Ga0325405_10539202	3300032389	Xylem	MPKPVTLILRPKYSHKNKIKIYHEPQFLTDSMSNDKIKKKLNK
Ga0307507_105591931	3300033179	Ectomycorrhiza	LILRPRYSYKKQTKIDYETQFPTDSMFNDRIEKKIN
Ga0307510_100541422	3300033180	Ectomycorrhiza	MPKPVTLILRPRYFHKKQIKIDYEAQFPTDRMLNDKIEKIIIK
Ga0307510_100761802	3300033180	Ectomycorrhiza	MPKPVTMILKPRYSPKKQIKIDYETQFPTDPMLNDKIGKKSIK
Ga0307510_100942584	3300033180	Ectomycorrhiza	MSKLVTLILRLRYSYKKQTKIDYETQFPTDSMFNDRIEKKIN
Ga0307510_101712931	3300033180	Ectomycorrhiza	MPKLLTLILRLRYSNKKQIKTDYKTQFPTNPMLNDKIKKNLIK
Ga0307510_104567231	3300033180	Ectomycorrhiza	KLVTLILKPRYSHKNQMKIDYEAHFLTDLMLNDKIFKKSIK