Metagenome Family F096291

Overview

Basic Information

• Family ID: F096291
• Family Type: Metagenome
• Number of Sequences: 105
• Average Sequence Length: 42 residues
• Representative Sequence: LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILR
• Number of Associated Samples: 70
• Number of Associated Scaffolds: 105

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 80.95 %
• % of genes near scaffold ends (potentially truncated): 88.57 %
• % of genes from short scaffolds (< 2000 bps): 85.71 %
• Associated GOLD sequencing projects: 70
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (80.952 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.571 % of family members)
• Environment Ontology (ENVO): Unclassified (54.286 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (55.238 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.57%
  β-sheet: 0.00%
  Coil/Unstructured: 51.43%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13683	rve_3	2.86
PF00211	Guanylate_cyc	1.90
PF12840	HTH_20	1.90
PF00067	p450	0.95
PF13411	MerR_1	0.95
PF06348	DUF1059	0.95
PF00109	ketoacyl-synt	0.95
PF08924	DUF1906	0.95
PF12773	DZR	0.95
PF02535	Zip	0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.95
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.95
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.95
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.95
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.95
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.95
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.95
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.95

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.95 %
Unclassified	root	N/A	19.05 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.95 %
Unclassified	root	N/A	19.05 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.95 %
Unclassified	root	N/A	19.05 %

Level 4

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.76 %
Unclassified	root	N/A	19.05 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %
Unclassified	root	N/A	19.05 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.38 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.95 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.95 %
Unclassified	root	N/A	19.05 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.90 %

Level 7

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.90 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.81 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.90 %
Unclassified	root	N/A	19.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.19 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.95 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.19 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.90 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.95 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.95 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.90 %
Unclassified	root	N/A	19.05 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.19 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.81 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.90 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.95 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.95 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %
Unclassified	root	N/A	19.05 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.19 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.95 %
Amycolatopsis lexingtonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lexingtonensis	0.95 %
Amycolatopsis lurida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lurida	0.95 %
Amycolatopsis mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	0.95 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.90 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.95 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.95 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.95 %
Unclassified	root	N/A	19.05 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.95 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.19 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.95 %
Amycolatopsis lexingtonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lexingtonensis	0.95 %
Amycolatopsis lurida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lurida	0.95 %
Amycolatopsis mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	0.95 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.90 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.95 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.95 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.95 %
Streptomyces sp. PRh5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PRh5	0.95 %
Unclassified	root	N/A	19.05 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2124908045|KansclcFeb2_ConsensusfromContig116753	Not Available	624
2140918007|ConsensusfromContig27119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis lurida	641
2140918024|NODE_299558_length_631_cov_8.049129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis mediterranei	681
3300000955|JGI1027J12803_103456202	All Organisms → cellular organisms → Bacteria	525
3300000956|JGI10216J12902_102985158	All Organisms → cellular organisms → Bacteria	1393
3300000956|JGI10216J12902_112769086	All Organisms → cellular organisms → Bacteria	817
3300001532|A20PFW1_1716266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	557
3300001535|A3PFW1_10281288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1494
3300001536|A1565W1_10754713	All Organisms → cellular organisms → Bacteria	608
3300001536|A1565W1_10963493	Not Available	1093

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	5.71%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.86%
Plants	Host-Associated → Plants	5.71%
Terrestrial	Environmental → Terrestrial	91.43%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Sediment	Environmental → Aquatic → Sediment	1.90%
Soil	Environmental → Terrestrial → Soil	91.43%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%

Type

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	0.95%
Sand	Environmental → Terrestrial → Soil → Sand	3.81%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	15.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.00%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.95%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	12.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.57%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_12348330	2124908045	Soil	LVEEGCLLWSFAYLAVRNLFALVWLLARPRRSKELEILVLR
A_all_C_00077660	2140918007	Soil	LLWSLAYLVVRNLFALVWLLGRQRGSKELEILVLRHELAVLR
B_all_v_01754740	2140918024	Soil	LLWSLAYLVVRNLFALVWLLGRQRGSKELEILVLRHELAVLRR
JGI1027J12803_1034562023	3300000955	Soil	LLWSFAYLVVRNLFALVWLLARPRRSKELEILVLRHELAMLR
JGI10216J12902_1029851581	3300000956	Soil	VVWSFFYLSVRSLFALALLLGRSDRSKDVEILVLR
JGI10216J12902_1127690861	3300000956	Soil	LLWSLVYLVVRNLFALVWLLGRRRRSKELEILVLRHELAI
A20PFW1_17162661	3300001532	Permafrost	LLWSFAYVVVRGLLSLVVLFGRSSGSNELEILVLRHELA
A3PFW1_102812884	3300001535	Permafrost	LLWSFAYLTVRSLFALVLLTGRSRRSKELEILVLRHELAVLRRQS
A1565W1_107547132	3300001536	Permafrost	LLWSFVYLVVRNLFALVWLLARPRRSKELEILALRHE
A1565W1_109634931	3300001536	Permafrost	VFWSLAYLVVRRLFEAMMLCCRSPRSKELEILVLRHELSILRRH
A2065W1_110274003	3300001537	Permafrost	LLWSFVYLVVRNLFALVWLLGRPRRSLELEILVLRHELEIFRR
Ga0070698_1003035303	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LLWSFAYLAVRNLFALVWLLARPRRSNELEILVLRHELAMLRR*
Ga0070731_100201641	3300005538	Surface Soil	LLWALVYLVVRSLFALVFLAGRSGPSKELEILVLR
Ga0066699_103136801	3300005561	Soil	LLWSLVYLVVRNLRSLVWLLARPRRSRELEILVLRHEL
Ga0066705_101781871	3300005569	Soil	LLWSFLYLVVRNLFALVWLLGRPRRSKELEILVLRHELAVLRRQ
Ga0066706_112059921	3300005598	Soil	LPWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILRRQAS
Ga0066794_101006602	3300005947	Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILR*
Ga0075433_107186672	3300006852	Populus Rhizosphere	LLWSFVYLVVRNLFALVWLLARPRRSKELEILVLRHELA
Ga0075425_1002283371	3300006854	Populus Rhizosphere	LFWSFVYLVVRNLFALVWLLARPRRSNELEIPVPRHELAVLRRQRARPKLPTLIAHC*
Ga0073934_102493063	3300006865	Hot Spring Sediment	VFWSFLYIAVRVFELAVLVARSERSKELEILVLRHELTILRRQAKRPP
Ga0099827_101956501	3300009090	Vadose Zone Soil	LLWSFAYLVVRNLFVLAYLSAWPRRSKELEILVLRHELAILRRQAR
Ga0105247_107273601	3300009101	Switchgrass Rhizosphere	VYLVARNLFALVWWLGRQRRSKELEILVLRHELAIL
Ga0066709_1012810052	3300009137	Grasslands Soil	LLWSFVYLVVRNLFALVLLLGRRRRSKELGILVLRHELA
Ga0066709_1033288941	3300009137	Grasslands Soil	LLWSFVYLGVRNLFALVWLLGRPRRSKELEILVVRHELAILRRQSAP
Ga0105062_10589881	3300009817	Groundwater Sand	LVWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILRRQA
Ga0126313_102384951	3300009840	Serpentine Soil	VVEEGYLFWSFAYLVVRNLFALVWLLGRPRRSKELEILVLRHELAIL
Ga0126308_104755042	3300010040	Serpentine Soil	MYLVVRDLFALVWLLGRPRRSKELEILVLRHELSILRRRAFATAADAG*
Ga0126308_113505182	3300010040	Serpentine Soil	LLWSLVYLVVRNLFAFVWLRARPRRSKELEILVLRPELWILRRR
Ga0126312_109751391	3300010041	Serpentine Soil	LLWTFVYLMFRNLFALVWLLARPRRSKEFEILLLRHQLACAGMLAG*
Ga0126314_110104732	3300010042	Serpentine Soil	VAWSFLYLAVRNVFALIVLLGRTDRSNELETLVLRHELAV
Ga0134070_103659741	3300010301	Grasslands Soil	LLWSFLYLVVRNLFALVWLLGRRRRSKELEILVLRHKLAILRRQA
Ga0137393_109559582	3300011271	Vadose Zone Soil	VVEEDCLLWSVAYLGVRNLFALVWLLARPRRSKEL
Ga0120153_10577742	3300011991	Permafrost	LLWSFVYLVVRNLFALVWLLARPRRSKELEILVLRHELAILRRQ
Ga0120157_10189611	3300011994	Permafrost	VYLVVRNLFALVWLLGRPRRSKELEILVLRHELAIL
Ga0120162_10364403	3300011997	Permafrost	LLWSFAYLAVRNLFALVLLVGRSRRSKELEILVLRHELAGLR
Ga0120152_11596182	3300012011	Permafrost	LPSIEEGSLLWAFVYLVVRNLFALVWLLARPRRSKECEILLLRHELA
Ga0120159_10353264	3300012014	Permafrost	LLWSFVYLVVRNLFALVWLLGRPRRSKEMEILVLR
Ga0137389_113514632	3300012096	Vadose Zone Soil	LLWSCVYLVARNLFALVWLLARSRRSKELEIAVLRHELAVLRR
Ga0137364_111348911	3300012198	Vadose Zone Soil	LLWSFAYLVVRNLFALVWLVARPRRSKELEILVLRHELAM
Ga0137365_103546492	3300012201	Vadose Zone Soil	LFWSFAYLVARNRFALVWLLARPGRSKELEILVLRP
Ga0137365_106600911	3300012201	Vadose Zone Soil	VAEEGCLLWSFVYLIVRNLFALVWLVGRRRRSKELEIRVPRTHEEVWM*
Ga0137365_107095323	3300012201	Vadose Zone Soil	LLWSFAYVVVRGLLSLVVLFGRSSGSNELEILVLRHELAVLR
Ga0137374_100866017	3300012204	Vadose Zone Soil	VYLVVRNLFALVWLLGRPRGSKELEILVLRHELAVLRRQ
Ga0137374_101080681	3300012204	Vadose Zone Soil	MRNLFALVWLLGRPRGSKELEILVLRHELAVLRRQSARPRLT
Ga0137374_101367871	3300012204	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILRRQALAA*
Ga0137374_101978673	3300012204	Vadose Zone Soil	LVLVEEGGCVVWSFVYLVVRNLFALVWLLGRPCRSKELEILVLRHE
Ga0137374_104251172	3300012204	Vadose Zone Soil	LLWSFAYLVVRNLFALVWLLGRPRRSKKLEILVLRH
Ga0137374_106708462	3300012204	Vadose Zone Soil	LLWSLVYLVVRNLFALVWLLGRPRRSKEMEILVLRHELAILRRQ
Ga0137374_110196121	3300012204	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILRRQ
Ga0137380_105509091	3300012206	Vadose Zone Soil	LESIEGHLVWWFAYLAVHLFAFVVLFGRPRRSKELEILVL
Ga0137380_113244291	3300012206	Vadose Zone Soil	LLWSFAYLVVRNLFALVYLLTRPHRSKELEILVLR
Ga0137376_116269052	3300012208	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEMLVLRHELAILGRQAAPSKP*
Ga0137379_113589761	3300012209	Vadose Zone Soil	VPWSKEGRLLWSLVYLVVRNLFALVWLLGQPRRSKELEILILRHELAI
Ga0137379_117141822	3300012209	Vadose Zone Soil	LLWSLVYLVVRNLFALVWLLGQPRRSKELEILILRHELAI
Ga0137379_117207312	3300012209	Vadose Zone Soil	LLWSFAYLVVRNLFALACLLARPRRSKELEILVLRRELAICIAGTR*
Ga0137378_107212682	3300012210	Vadose Zone Soil	LLWSFAYLVVRNLFALVCLLARQRRSKELEILVLRHELAILRRQARP
Ga0137378_118266361	3300012210	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRRRRSKELEILVLRHE
Ga0137377_110155672	3300012211	Vadose Zone Soil	LLWSFVYLIARNLFALVWLLARPRRSKEFEILLLRHELAVL
Ga0137387_111105051	3300012349	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKEMEILVLRHE
Ga0137372_101285571	3300012350	Vadose Zone Soil	VQVVWSFFYLSVRNLFALVLLLGRSDRSKDVEILVLRH
Ga0137372_101374132	3300012350	Vadose Zone Soil	LRWSFVYLVARNLFALVVLFGRRRRSKEVEILVLRHELAVLTGRLLGRG*
Ga0137372_108241511	3300012350	Vadose Zone Soil	LLWSFVYLVVRNLFTLVWLLGRPRRSKELEILVLRH
Ga0137372_112172391	3300012350	Vadose Zone Soil	VVWSFFYLSVRNLFALVLLLGRSDRSKDVEILVLRH
Ga0137386_112122012	3300012351	Vadose Zone Soil	LLWSFMYLVVRNLFALGWLLGRPRRGQELEILVLR
Ga0137367_101917351	3300012353	Vadose Zone Soil	VLWSFAYLVVRRLFQLIVICCRSSGSKELEILVLRHELSIL
Ga0137367_102344951	3300012353	Vadose Zone Soil	VYLVVRNLFALVWLLGQSRRSKELEIRVPRTHEEVWM*
Ga0137367_102392291	3300012353	Vadose Zone Soil	MVEGGCLLWSFVYLVVRNLFTLVWLLGRPRRSKELEILVLRHQLAILRRQS
Ga0137366_105552853	3300012354	Vadose Zone Soil	LLWSFAYVVVRGLLSLVVLFGRSSGSNELEILVLRHE
Ga0137366_106025592	3300012354	Vadose Zone Soil	LLWSFVYLIVRNLFALVWLLARRRCSKELEILVLRQELAILRRQRS
Ga0137369_100446621	3300012355	Vadose Zone Soil	LIWSLAYLVVRNLFALVWLLARPRRSKELEILVLRHELAMLR
Ga0137369_100539591	3300012355	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILRRQAS
Ga0137369_101800463	3300012355	Vadose Zone Soil	LLWSFVYLAVRTLFALVLLLAGSRRSKELEILLLRHELAILRRQTG
Ga0137369_101887182	3300012355	Vadose Zone Soil	LLWSFAYLVVRNLFALVWLLARPRRSKELEILVLRH
Ga0137369_103015981	3300012355	Vadose Zone Soil	VPSSREGSLLWSFVYLVVRNQFALMWLLARPRRSKELE
Ga0137371_107804602	3300012356	Vadose Zone Soil	LLWSFAYLVVRNLFALVWLLARPRRSKELEILVLRHELALLRRRARPPRL
Ga0137368_100635624	3300012358	Vadose Zone Soil	LLWSFAYLAVRNLFALVWLLARPRRSKELEILVLRHE
Ga0137368_108779942	3300012358	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLARPRRSKELEILVLRHE
Ga0137385_102282651	3300012359	Vadose Zone Soil	LVYLVVRNLFALVWLLGQPRRSKELEILILRHELAILRRQSS
Ga0137375_100921521	3300012360	Vadose Zone Soil	MYLVMRNLFALVWLLARPRRSKELEILVLRHELAVLRRQA
Ga0137375_102366284	3300012360	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLGRSRRSKELEILALRH
Ga0137375_103195033	3300012360	Vadose Zone Soil	VVEEGWLLWSFVSLVVRNLFALVWLLGRRRHRSKELEILVLRHELAI
Ga0137375_106727232	3300012360	Vadose Zone Soil	MYLVVRNLFALVWLLARPRRSKELEILVLRHELALLRR
Ga0137375_110346641	3300012360	Vadose Zone Soil	LLWSFAYLVVRNLFALACLSARPRRSKELEILVLRHELAIL
Ga0137375_113602141	3300012360	Vadose Zone Soil	LLWSLAYLVVRNLFALVCLLARPRRSRELEILVLRHELAILRRQARQK
Ga0137373_100837814	3300012532	Vadose Zone Soil	LLWSFAYLGVRNLFALVWLLARPRRSKELEILVLRHE
Ga0137373_108095601	3300012532	Vadose Zone Soil	LLWSFVYLVVRNLFALVWLLARPRRSKELEILVLRHELAVL
Ga0157302_101463072	3300012915	Soil	ASVIESEVQVVWSFFYLSVRNLFALVLLLGRSDRSKEVEILVLRHELLS*
Ga0134076_104860021	3300012976	Grasslands Soil	LLWSFVYLVARNLFALVWLLARPRRSKEREILVLRHELAVLRRRTRPPL
Ga0120155_11144011	3300013768	Permafrost	LVWSFVYLATRNLFALVLLLGRPGRSKEVEILVLRHE
Ga0120173_10421261	3300014031	Permafrost	LLWSFAYLAVRNLFALVLLVGRSRRSKELEILVLRHELAVLR
Ga0134078_106098001	3300014157	Grasslands Soil	MVEGGCLLWSLVYLVVRNLFALVWLLGRPRRSKEFEILVLRHEL
Ga0120171_10275124	3300014827	Permafrost	LFWSLVHPVVRNLFALVWLLGRPRRSKELEILVLRH
Ga0134085_105796111	3300015359	Grasslands Soil	VQVVWSFFYLSVRNLFALVLLLGCSDRSKDVEVLVLRHEL
Ga0132257_1033937991	3300015373	Arabidopsis Rhizosphere	LVRSFAYLVVRNLFALVWLLARRRRSKELELLLLRHEPAILRRQ
Ga0132257_1038102931	3300015373	Arabidopsis Rhizosphere	VYVVVREGRLLWSFIYLAARNLFAFVLLFVRRRRSKELEILV
Ga0184619_100404873	3300018061	Groundwater Sediment	VYLVVRNLFALVWLLGRPRRSKELEILILRHELAILRRQTSR
Ga0190272_109355271	3300018429	Soil	LLWSFVYLVVRNLFALVWLLARPRRSKELEILVLRHELAILR
Ga0222622_111711841	3300022756	Groundwater Sediment	VLWSLAYLVVRNLFALVWLLARPRRSNELEILVLRHELLMLR
Ga0208850_10504131	3300025457	Arctic Peat Soil	VLWSVAYLVVRRLFELMMLCCRSSGSKELEILVLRHELSILRR
Ga0209913_10006547	3300026272	Soil	LLWSFVYLVVRNLFALVWLLGRPRRSKELEILVLRHELAILR
Ga0209469_11341601	3300026307	Soil	VLWSFAYLVVRRLFQLIVICCRSSGSKELEILVLRHELSILR
Ga0209879_10693621	3300027056	Groundwater Sand	LLWSFAYLAIRNLFALVWLLTRSGRSKELEILVLRH
Ga0209887_10569541	3300027561	Groundwater Sand	LLWSFVYLMLRNLFALVWLLARPRRSKEFEILLLRHELAVLRRQ
Ga0209887_10692992	3300027561	Groundwater Sand	LLWTFVYLIVRNLFALVWLLARPRRSKEFEILLLRHELAVLR
Ga0307416_1003344761	3300032002	Rhizosphere	LLWSFVYLIGRNVFALIWLLARQRRSKEMELLLLRHELA