Metagenome / Metatranscriptome Family F096103

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096103
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	93 residues
Representative Sequence	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC
Number of Associated Samples	95
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.62 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	84.76 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.190 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (27.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 0.00% Coil/Unstructured: 68.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13646	HEAT_2	3.81
PF03401	TctC	2.86
PF00668	Condensation	2.86
PF05974	DUF892	1.90
PF12833	HTH_18	0.95
PF03988	DUF347	0.95
PF00724	Oxidored_FMN	0.95
PF09347	DUF1989	0.95
PF07813	LTXXQ	0.95
PF07690	MFS_1	0.95
PF07883	Cupin_2	0.95
PF09339	HTH_IclR	0.95
PF00999	Na_H_Exchanger	0.95
PF13384	HTH_23	0.95
PF00239	Resolvase	0.95
PF03069	FmdA_AmdA	0.95
PF00890	FAD_binding_2	0.95
PF13565	HTH_32	0.95
PF00149	Metallophos	0.95
PF13091	PLDc_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.81
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.86
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.86
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.90
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.95
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.95
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.95
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.95
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.95
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.95
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.95
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.95
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.95
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.95
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
All Organisms	root	All Organisms	43.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
cellular organisms	root	All Organisms → cellular organisms	43.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.86 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	10.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.90 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	10.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Fungi incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis	10.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.52 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.67 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	2.86 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.95 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.95 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Mucoromycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	2.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.90 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.95 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Mucoromycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.95 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.95 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Endogonomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
unclassified Euzebyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.95 %
Tautonia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia	0.95 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.95 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Endogonales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.95 %
Tautonia sociabilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia sociabilis	0.95 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.95 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Endogonales incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
Rhizobium sp. P38BS-XIX	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P38BS-XIX	0.95 %
Tautonia sociabilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia sociabilis	0.95 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.95 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Bifiguratus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
Rhizobium sp. P38BS-XIX	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P38BS-XIX	0.95 %
Tautonia sociabilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia sociabilis	0.95 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.95 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.19 %
Bifiguratus adelaidae	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	10.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.67 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	2.86 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.90 %
Rhizobium sp. P38BS-XIX	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P38BS-XIX	0.95 %
Tautonia sociabilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia sociabilis	0.95 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.95 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.95 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_13038383	Not Available	540	Open in IMG/M
3300001661\|JGI12053J15887_10022991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3493	Open in IMG/M
3300001661\|JGI12053J15887_10028304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3147	Open in IMG/M
3300001661\|JGI12053J15887_10178848	Not Available	1093	Open in IMG/M
3300001661\|JGI12053J15887_10489586	Not Available	587	Open in IMG/M
3300001867\|JGI12627J18819_10376549	Not Available	576	Open in IMG/M
3300002906\|JGI25614J43888_10031714	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300002910\|JGI25615J43890_1078297	Not Available	576	Open in IMG/M
3300005172\|Ga0066683_10192077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1260	Open in IMG/M
3300005186\|Ga0066676_10354154	Not Available	982	Open in IMG/M
3300005436\|Ga0070713_101146876	Not Available	752	Open in IMG/M
3300005437\|Ga0070710_10440985	Not Available	881	Open in IMG/M
3300005439\|Ga0070711_101280253	Not Available	636	Open in IMG/M
3300005445\|Ga0070708_100151366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2158	Open in IMG/M
3300005468\|Ga0070707_101370940	Not Available	674	Open in IMG/M
3300005471\|Ga0070698_100800563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300005518\|Ga0070699_100021928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5505	Open in IMG/M
3300005536\|Ga0070697_101408195	Not Available	622	Open in IMG/M
3300005552\|Ga0066701_10928796	Not Available	515	Open in IMG/M
3300005554\|Ga0066661_10253177	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1090	Open in IMG/M
3300005561\|Ga0066699_11218378	Not Available	517	Open in IMG/M
3300006028\|Ga0070717_11313514	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	657	Open in IMG/M
3300006049\|Ga0075417_10111124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1251	Open in IMG/M
3300006163\|Ga0070715_10692033	Not Available	608	Open in IMG/M
3300006172\|Ga0075018_10468357	Not Available	652	Open in IMG/M
3300006175\|Ga0070712_100029719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3665	Open in IMG/M
3300006175\|Ga0070712_100771970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300006797\|Ga0066659_10571975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300006800\|Ga0066660_11244752	Not Available	583	Open in IMG/M
3300006871\|Ga0075434_100172835	Not Available	2180	Open in IMG/M
3300006903\|Ga0075426_11300304	Not Available	552	Open in IMG/M
3300007076\|Ga0075435_100904764	Not Available	770	Open in IMG/M
3300007255\|Ga0099791_10264224	Not Available	817	Open in IMG/M
3300007788\|Ga0099795_10384727	Not Available	634	Open in IMG/M
3300009038\|Ga0099829_10465524	Not Available	1048	Open in IMG/M
3300009088\|Ga0099830_10049971	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300009089\|Ga0099828_11899498	Not Available	522	Open in IMG/M
3300009094\|Ga0111539_12567836	Not Available	591	Open in IMG/M
3300009100\|Ga0075418_10051840	All Organisms → cellular organisms → Bacteria	4402	Open in IMG/M
3300009143\|Ga0099792_11185904	Not Available	518	Open in IMG/M
3300009162\|Ga0075423_11857350	Not Available	650	Open in IMG/M
3300010905\|Ga0138112_1028620	Not Available	731	Open in IMG/M
3300011270\|Ga0137391_10496298	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1034	Open in IMG/M
3300012096\|Ga0137389_10665856	Not Available	894	Open in IMG/M
3300012169\|Ga0153990_1141177	Not Available	537	Open in IMG/M
3300012180\|Ga0153974_1012259	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1819	Open in IMG/M
3300012198\|Ga0137364_10915248	Not Available	664	Open in IMG/M
3300012200\|Ga0137382_10848355	Not Available	658	Open in IMG/M
3300012200\|Ga0137382_11115282	Not Available	563	Open in IMG/M
3300012202\|Ga0137363_11301188	Not Available	615	Open in IMG/M
3300012203\|Ga0137399_10880277	Not Available	754	Open in IMG/M
3300012208\|Ga0137376_10646787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300012211\|Ga0137377_10165787	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	2120	Open in IMG/M
3300012362\|Ga0137361_10050822	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3418	Open in IMG/M
3300012362\|Ga0137361_10654856	Not Available	961	Open in IMG/M
3300012582\|Ga0137358_10222470	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1286	Open in IMG/M
3300012683\|Ga0137398_10553810	Not Available	793	Open in IMG/M
3300012918\|Ga0137396_10413115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300012923\|Ga0137359_10736756	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012924\|Ga0137413_10546647	Not Available	859	Open in IMG/M
3300012925\|Ga0137419_10868652	Not Available	741	Open in IMG/M
3300012927\|Ga0137416_11092769	Not Available	715	Open in IMG/M
3300012951\|Ga0164300_10975377	Not Available	543	Open in IMG/M
3300012957\|Ga0164303_11298053	Not Available	538	Open in IMG/M
3300012960\|Ga0164301_10708478	Not Available	758	Open in IMG/M
3300012987\|Ga0164307_11320356	Not Available	604	Open in IMG/M
3300015371\|Ga0132258_12463278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P38BS-XIX	1302	Open in IMG/M
3300020580\|Ga0210403_11303192	Not Available	555	Open in IMG/M
3300020581\|Ga0210399_10803259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	768	Open in IMG/M
3300021086\|Ga0179596_10665173	Not Available	528	Open in IMG/M
3300021168\|Ga0210406_10161136	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia sociabilis	1880	Open in IMG/M
3300021170\|Ga0210400_11018440	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	673	Open in IMG/M
3300021178\|Ga0210408_10454378	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1019	Open in IMG/M
3300021178\|Ga0210408_11086708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	616	Open in IMG/M
3300021432\|Ga0210384_10674617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300021478\|Ga0210402_11465929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	610	Open in IMG/M
3300024288\|Ga0179589_10187592	Not Available	899	Open in IMG/M
3300024347\|Ga0179591_1217302	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	2362	Open in IMG/M
3300025910\|Ga0207684_10758235	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	822	Open in IMG/M
3300025915\|Ga0207693_10314370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1226	Open in IMG/M
3300026304\|Ga0209240_1051822	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Mucoromycotina → Endogonomycetes → Endogonales → Endogonales incertae sedis → Bifiguratus → Bifiguratus adelaidae	1546	Open in IMG/M
3300026494\|Ga0257159_1087256	Not Available	543	Open in IMG/M
3300026538\|Ga0209056_10329629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1024	Open in IMG/M
3300026557\|Ga0179587_10051422	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300027326\|Ga0209731_1050449	Not Available	629	Open in IMG/M
3300027381\|Ga0208983_1025261	Not Available	1162	Open in IMG/M
3300027383\|Ga0209213_1005779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2176	Open in IMG/M
3300027388\|Ga0208995_1018631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1197	Open in IMG/M
3300027616\|Ga0209106_1016941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1564	Open in IMG/M
3300027616\|Ga0209106_1017055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1560	Open in IMG/M
3300027633\|Ga0208988_1036657	Not Available	1262	Open in IMG/M
3300027663\|Ga0208990_1062891	Not Available	1085	Open in IMG/M
3300027669\|Ga0208981_1010594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2336	Open in IMG/M
3300027681\|Ga0208991_1017453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2164	Open in IMG/M
3300027738\|Ga0208989_10005544	All Organisms → cellular organisms → Bacteria → Proteobacteria	4242	Open in IMG/M
3300027748\|Ga0209689_1293578	Not Available	633	Open in IMG/M
3300027873\|Ga0209814_10203482	Not Available	855	Open in IMG/M
3300027903\|Ga0209488_10141647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	1815	Open in IMG/M
3300027903\|Ga0209488_10192658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1537	Open in IMG/M
3300028047\|Ga0209526_10895003	Not Available	540	Open in IMG/M
3300028047\|Ga0209526_10983312	Not Available	506	Open in IMG/M
3300028787\|Ga0307323_10318949	Not Available	558	Open in IMG/M
3300028878\|Ga0307278_10170979	Not Available	972	Open in IMG/M
3300032174\|Ga0307470_11755417	Not Available	524	Open in IMG/M
3300032180\|Ga0307471_101637687	Not Available	799	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Plants	Host-Associated → Plants	8.57%
Fungi	Host-Associated → Fungi	1.90%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.62%
Mycelium	Host-Associated → Fungi → Mycelium	1.90%
Sediment	Environmental → Aquatic → Sediment	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.10%
Loam	Environmental → Terrestrial → Soil → Loam	30.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_130383831	3300000789	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSXTWTVALAQQPGPVTQQSDXAPIGYVXPRMQDLXPSVAQDEKEXEPELDAXAKELDKLENRICRGC*
JGI12053J15887_100229913	3300001661	Forest Soil	MNRPYLDRPIGSAMGVSRSGVLAATVAAAILANSGTWTTTLAEQPGPVAQQRDEAPIGYPQPRIRDLPPSVVQYEKKMEPELD*
JGI12053J15887_100283042	3300001661	Forest Soil	MNRLCLGRSIRSARGVSRSGVLAGTVAAAILANSATWTAALAQQPPVNQQRDXAPIGXQQPRIQDLSPSVLQDEKKMEPELDAIAKELEKLENRICRGC*
JGI12053J15887_101788483	3300001661	Forest Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQRRDEAPIGNQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC*
JGI12053J15887_104895862	3300001661	Forest Soil	MNRLCLGRSIRSAMGVSLSGVLAGTVAATILANSATWTAALAQQAPINQQRDEAPIGNQQPRIQDLSPNVLQDEKKMEPELDAIGKELEKLENRICRGC*
JGI12627J18819_103765491	3300001867	Forest Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILASSATWTVALAQQPGPVTQQSDQAPVGYVQPRMQDLPPSVAXDEKEVEPELDAVAKELDKLENRICRGC*
JGI25614J43888_100317142	3300002906	Grasslands Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
JGI25615J43890_10782971	3300002910	Grasslands Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEXEPELDAIAKELDKLENRICRGC*
Ga0066683_101920773	3300005172	Soil	MNRHCLERSIRSVMGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLEKRICRGC*
Ga0066676_103541541	3300005186	Soil	MNRHCLERSIRSVMGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELDELENRICRGC*
Ga0070713_1011468762	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0070710_104409852	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0070711_1012802531	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVAVAQQPGPVTQQSNQVPIGYVQPRMQDLPPSVAQDEKEVEPEL
Ga0070708_1001513664	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSGSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0070707_1013709401	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0070698_1008005631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENSICRGC*
Ga0070699_1000219284	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNRHCLERSIRSVMGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEARIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLENRICRGC*
Ga0070697_1014081952	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLEN
Ga0066701_109287961	3300005552	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANAATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0066661_102531772	3300005554	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0066699_112183781	3300005561	Soil	MNRHCLERSIRSVMGLFHSGALAATFAAVILANFATWTVALAQHPGPVTQQRDEAPIGYVQPRMQDMPPSVAQDEKEVEPELDAIAKELDKLEN
Ga0070717_113135142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0075417_101111241	3300006049	Populus Rhizosphere	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVARDEKEAEPELDAIAKELDKLENRICRGC*
Ga0070715_106920332	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVAVAQQPGPVTQQSNQVPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0075018_104683572	3300006172	Watersheds	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0070712_1000297197	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNGLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRVQDLPPSVAQEEKEVEPELDAIAKELNKLDNRICRGC*
Ga0070712_1007719701	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0066659_105719752	3300006797	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0066660_112447522	3300006800	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAGPELDDIA
Ga0075434_1001728352	3300006871	Populus Rhizosphere	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTHQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0075426_113003042	3300006903	Populus Rhizosphere	SRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0075435_1009047641	3300007076	Populus Rhizosphere	MNRLCLERSRRSEMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0099791_102642241	3300007255	Vadose Zone Soil	VVGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0099795_103847271	3300007788	Vadose Zone Soil	MGVSLSGVLAGTVAATILANSATRTAALAQQAPINQQRDEAPIGNQQPRIQDLSPNVLQDEKKMEPELDAIGKELEKLENRICRGC*
Ga0099829_104655242	3300009038	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0099830_100499714	3300009088	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0099828_118994981	3300009089	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQHPGPVSQQRDEARIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLENRICRGC*
Ga0111539_125678362	3300009094	Populus Rhizosphere	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELHKLENRICRGC*
Ga0075418_100518403	3300009100	Populus Rhizosphere	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVARDEKEAEPELDAIAKELDKLENRICRGC*
Ga0099792_111859041	3300009143	Vadose Zone Soil	MGVSRSGVLAGTVAATILANSATRTAALAQQAPINQQRDEAPIGNQQPRIQDLSPNVLQDEKKMEPELDAIGKELEKLENRICRGC*
Ga0075423_118573501	3300009162	Populus Rhizosphere	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMEDLPPSVAQDEKEMEPELDAIAKELDKLENRICRGC*
Ga0138112_10286202	3300010905	Grasslands Soil	MGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAPIGYVQPRMQDLPPSVARDEKEVEPELDAIAKELEKLEKRICRGC*
Ga0137391_104962981	3300011270	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDKAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0137389_106658561	3300012096	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVVLAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC*
Ga0153990_11411771	3300012169	Attine Ant Fungus Gardens	MNRLCLERSSRSVMGASRSGVLAATFVAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKELEPELDAIAKELDKLENRICRGC*
Ga0153974_10122591	3300012180	Attine Ant Fungus Gardens	LERSSRSVMGASRSGLLAATFVAAILANFATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKELEPELDAIAKELDKLENRICHGC*
Ga0137364_109152481	3300012198	Vadose Zone Soil	MGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAPIGYVQPRMQDMPPSVAQDEKEVEPELDAIAKELEKLEKRICRGC*
Ga0137382_108483552	3300012200	Vadose Zone Soil	MGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLEKRICRGC*
Ga0137382_111152821	3300012200	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICCGC*
Ga0137363_113011881	3300012202	Vadose Zone Soil	RSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137399_108802771	3300012203	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137376_106467871	3300012208	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDMPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137377_101657871	3300012211	Vadose Zone Soil	EFSMNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSNQAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137361_100508222	3300012362	Vadose Zone Soil	MGLFHFGALAATFAAAILANSATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLENRICRGC*
Ga0137361_106548561	3300012362	Vadose Zone Soil	MGVSRSGVLAATFAAALLVNSATWTVALEQQPGPVTQQRDEARIAYQQPRMQDLPPSVAQDEKKVEPELDAIAKELDKLENGICRGC*
Ga0137358_102224701	3300012582	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRMQDMPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137398_105538101	3300012683	Vadose Zone Soil	MGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQRRDEAPIGNQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC*
Ga0137396_104131151	3300012918	Vadose Zone Soil	VVGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDAAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKDLDKLENRICRGC*
Ga0137359_107367562	3300012923	Vadose Zone Soil	SIRSVMGLFHSCALAATFAAAILANFATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLEKRICRGC*
Ga0137413_105466471	3300012924	Vadose Zone Soil	MGVSRSGVLAGTVAATILANSATRTAALAQQAPINQQRDEAPIGNQQPRIQDLSPNVLQDEKKMEPELDAIGKELEKLENRI
Ga0137419_108686522	3300012925	Vadose Zone Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVAQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC*
Ga0137416_110927691	3300012927	Vadose Zone Soil	MGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQQRDEAPIGNQQPRIQDLSPSVLRDEKKMEPEIDAIGKELEK
Ga0164300_109753771	3300012951	Soil	MGASRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQSNQVPIGYVQPRMQDLPPSVAQDEKEVEPELDAVAKELDKLENRICRSC*
Ga0164303_112980531	3300012957	Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAITKELDKLENRICRSC*
Ga0164301_107084782	3300012960	Soil	MNRLCLERSSRSVMGPSRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQRDEAPIGYVQPRMQDLPPSVAQDEKEVEPEL
Ga0164307_113203561	3300012987	Soil	MGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGYVQPRVQDLPPSVAQDEKEVEPELDVIAKELNKLENRVCRGC*
Ga0132258_124632782	3300015371	Arabidopsis Rhizosphere	MGASRSGVLAATFAAAILASSATWTVALAQQPGPVTQQSDQAPVGYVQPRMQDLPPSVAQDEKEVEPELDAVAKELDKLENRICRGC*
Ga0210403_113031921	3300020580	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAIAKELEKLENRICR
Ga0210399_108032591	3300020581	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAIAKELEKLENRICRGC
Ga0179596_106651732	3300021086	Vadose Zone Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVVLAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0210406_101611363	3300021168	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC
Ga0210400_110184401	3300021170	Soil	LERSSRSVMGASRSGVLAATFAAAILASSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0210408_104543781	3300021178	Soil	RSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0210408_110867081	3300021178	Soil	LERSSRSVMGASRSGVLAATFAAAILANSAMWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSVAQDEKEVEPELDAIAKELEKLENRICRGC
Ga0210384_106746171	3300021432	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQRDEAPIGSVQPRMQDLPPSGAQDEKEVEPELDAIAKELDKLENRICRGC
Ga0210402_114659291	3300021478	Soil	MGASRSGVLAATFAAAILANSATWTVAVAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELEKLENRICRGC
Ga0179589_101875921	3300024288	Vadose Zone Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC
Ga0179591_12173021	3300024347	Vadose Zone Soil	FSMNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLGNRICRGC
Ga0207684_107582352	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0207693_103143702	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNGLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSNQVPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0209240_10518221	3300026304	Grasslands Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0257159_10872561	3300026494	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPE
Ga0209056_103296291	3300026538	Soil	MNRHCLERSIRSVMGLFHSGALAATFAAAILANFATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLEKRICRGC
Ga0179587_100514224	3300026557	Vadose Zone Soil	MNRLCLERSSRSEMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLGN
Ga0209731_10504491	3300027326	Forest Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILASSATWTVALAQQPGPVTQQSDQAPVGYVQPRMQDLPPSVAQDEKEVESELDAIAKELDKLENRICRGC
Ga0208983_10252611	3300027381	Forest Soil	MNRLCLGRSIRSARGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQQRDEAPIGNQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0209213_10057793	3300027383	Forest Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQAPINQQRDEAPIGNQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0208995_10186311	3300027388	Forest Soil	MNRPYLDRPIGSAMGVSRSGVLAATVAAAILANSGTWTTTLAEQPGPVAQQRDEAPIGYPQPRIRDLPPSVVQYEKKMEPELDAIAKELEKLENRMCRGC
Ga0209106_10169412	3300027616	Forest Soil	MNRPYLDRPIGSAMGVSRSGVLAATVAAAILANSGTWTTTLAEQPGPVAQQRDEAPIGYPQPRIRDLPPSVVQYEKKMEPELD
Ga0209106_10170553	3300027616	Forest Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQRRDEAPIGNQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0208988_10366573	3300027633	Forest Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQPPVNQQRDQAPIGTQQPRIQDLSPSVLQDEKKMEPELDAIAKELEKLENRICRGC
Ga0208990_10628911	3300027663	Forest Soil	MNRLCLGRSIRSARGVSRSGVLAGTVAAAILANSATWTAALAQQPPVNQQRDQAPIGTQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0208981_10105942	3300027669	Forest Soil	MNRPYLDRPIGSAMGISRSGVLAATVAAAILANSGTWTTTLAEQPGPVAQQRDEAPIGYPQPRIRDLPPSVVQYEKKMEPELD
Ga0208991_10174533	3300027681	Forest Soil	MGVSRSGVLAATVAAAILANSGTWTTTLAEQPGPVAQQRDEAPIGYPQPRIRDRPPSVVQYEKKMEPELDAIAKELEKLENRMCRGF
Ga0208989_100055446	3300027738	Forest Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQPPVNQQRDQAPIGTQQPRIQDLSPSVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0209689_12935781	3300027748	Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQHPGPVTQQRDEAGIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLEKRICRGC
Ga0209814_102034821	3300027873	Populus Rhizosphere	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVARDEKEAEPELDAIAKELDKLENRICRGC
Ga0209488_101416471	3300027903	Vadose Zone Soil	KRSIRSVMGLFHFGALAATFAAAILANSATWTVALAQHPGPVSQQRDEARIAYQQPRMQDLPPNVAQDEKNVEPELDAIAKELEKLENRICRGC
Ga0209488_101926581	3300027903	Vadose Zone Soil	MNRLCLGRSIRSAMGVSLSGVLAGTVAATILANSATRTAALAQQAPINQQRDEAPIGNQQPRIQDLSPNVLQDEKKMEPELDAIGKELEKLENRICRGC
Ga0209526_108950031	3300028047	Forest Soil	RAGVLAAAVAAAILVDSATWTAALAQQPGPVAQRRDKAPIWHQQPRLQDLPPSVAQDEKNVESELDAIAKDIEKLETRICRGC
Ga0209526_109833122	3300028047	Forest Soil	SRSGVLAATFVAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEAEPELDAIAKELDKLENRICRGC
Ga0307323_103189491	3300028787	Soil	MNRLCLGRSIRSAMGVSRSGVLAGTVAAAILANSATWTAALAQQAPVNQRRDEALIGNQQPRIQDLSPSVLQDEKKMEPEL
Ga0307278_101709792	3300028878	Soil	VFSPQLSRAILANSVTWSAAAAPQPGPVTPQRDEARIAYQQPRMQDLPPSVAQDEKKVEPELDAIAKDLNKLENRICRGC
Ga0307470_117554171	3300032174	Hardwood Forest Soil	VLMNRLCLERSSRSVMGASRSGLLAATFAAAILANSATWTVALAQQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC
Ga0307471_1016376871	3300032180	Hardwood Forest Soil	MNRLCLERSSRSVMGASRSGVLAATFAAAILANSATWTVALGRQPGPVTQQSDEAPIGYVQPRMQDLPPSVAQDEKEVEPELDAIAKELDKLENRICRGC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096103

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences