Metagenome Family F096100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096100
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	50 residues
Representative Sequence	MINQMRDHQMKILQAYIDRRNRLWVQIKAAYPTYTQPEIEARLEQFGA
Number of Associated Samples	76
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.84 %
% of genes near scaffold ends (potentially truncated)	22.86 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.32% β-sheet: 0.00% Coil/Unstructured: 48.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02775	TPP_enzyme_C	13.33
PF13570	PQQ_3	12.38
PF03401	TctC	6.67
PF04214	DUF411	6.67
PF02776	TPP_enzyme_N	4.76
PF04909	Amidohydro_2	2.86
PF00486	Trans_reg_C	1.90
PF01979	Amidohydro_1	1.90
PF01011	PQQ	0.95
PF04392	ABC_sub_bind	0.95
PF07969	Amidohydro_3	0.95
PF13360	PQQ_2	0.95
PF00990	GGDEF	0.95
PF03466	LysR_substrate	0.95
PF02786	CPSase_L_D2	0.95
PF00753	Lactamase_B	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3019	Uncharacterized metal-binding protein, DUF411 family	Function unknown [S]	6.67
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.67
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.14 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	4.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.81 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	1.90 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	1.90 %
unclassified Comamonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	4.76 %
Tardiphaga robiniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1.90 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.90 %
Comamonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10646901	Not Available	673	Open in IMG/M
3300004281\|Ga0066397_10055999	Not Available	726	Open in IMG/M
3300004633\|Ga0066395_10466901	Not Available	722	Open in IMG/M
3300004778\|Ga0062383_10282241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	792	Open in IMG/M
3300004780\|Ga0062378_10000944	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300005180\|Ga0066685_10874753	Not Available	602	Open in IMG/M
3300005332\|Ga0066388_100012640	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
3300005332\|Ga0066388_100292659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2272	Open in IMG/M
3300005332\|Ga0066388_100314574	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005332\|Ga0066388_101807753	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005332\|Ga0066388_103249270	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005332\|Ga0066388_103946516	Not Available	757	Open in IMG/M
3300005332\|Ga0066388_105214469	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005440\|Ga0070705_100530005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300005569\|Ga0066705_10534266	Not Available	730	Open in IMG/M
3300005713\|Ga0066905_100003899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5995	Open in IMG/M
3300005713\|Ga0066905_100093972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2014	Open in IMG/M
3300005713\|Ga0066905_100499920	Not Available	1010	Open in IMG/M
3300005764\|Ga0066903_103031015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	910	Open in IMG/M
3300005833\|Ga0074472_10013189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	1026	Open in IMG/M
3300005833\|Ga0074472_10027928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9460	Open in IMG/M
3300005833\|Ga0074472_10223488	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300005880\|Ga0075298_1036320	Not Available	516	Open in IMG/M
3300005937\|Ga0081455_10325627	Not Available	1093	Open in IMG/M
3300005983\|Ga0081540_1140247	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006163\|Ga0070715_10728145	Not Available	595	Open in IMG/M
3300006804\|Ga0079221_11186272	Not Available	592	Open in IMG/M
3300006806\|Ga0079220_11902288	Not Available	528	Open in IMG/M
3300006845\|Ga0075421_102393916	Not Available	553	Open in IMG/M
3300009012\|Ga0066710_101476290	Not Available	1050	Open in IMG/M
3300009090\|Ga0099827_10307049	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300009094\|Ga0111539_10118247	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300009137\|Ga0066709_100220628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2511	Open in IMG/M
3300009143\|Ga0099792_10063437	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300009147\|Ga0114129_13090451	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009803\|Ga0105065_1080483	Not Available	516	Open in IMG/M
3300010043\|Ga0126380_10167222	Not Available	1431	Open in IMG/M
3300010043\|Ga0126380_10773034	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300010046\|Ga0126384_11246751	Not Available	688	Open in IMG/M
3300010046\|Ga0126384_11808703	Not Available	580	Open in IMG/M
3300010046\|Ga0126384_12290621	Not Available	521	Open in IMG/M
3300010047\|Ga0126382_10157347	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300010358\|Ga0126370_11426954	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300010359\|Ga0126376_10219540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1592	Open in IMG/M
3300010359\|Ga0126376_13109406	Not Available	513	Open in IMG/M
3300010360\|Ga0126372_10841592	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300010360\|Ga0126372_11378040	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010360\|Ga0126372_12365887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	581	Open in IMG/M
3300010362\|Ga0126377_10018490	All Organisms → cellular organisms → Bacteria	5680	Open in IMG/M
3300010362\|Ga0126377_10115626	Not Available	2470	Open in IMG/M
3300010362\|Ga0126377_11825595	Not Available	683	Open in IMG/M
3300010362\|Ga0126377_13580808	Not Available	502	Open in IMG/M
3300010362\|Ga0126377_13593389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	502	Open in IMG/M
3300010397\|Ga0134124_10045049	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300010397\|Ga0134124_12577482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300010398\|Ga0126383_12386354	Not Available	614	Open in IMG/M
3300010400\|Ga0134122_10322898	Not Available	1334	Open in IMG/M
3300012199\|Ga0137383_11168606	Not Available	554	Open in IMG/M
3300012203\|Ga0137399_11576149	Not Available	545	Open in IMG/M
3300012206\|Ga0137380_11501452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300012210\|Ga0137378_11657405	Not Available	547	Open in IMG/M
3300012349\|Ga0137387_11117649	Not Available	560	Open in IMG/M
3300012359\|Ga0137385_10222284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1643	Open in IMG/M
3300012361\|Ga0137360_11034093	Not Available	709	Open in IMG/M
3300012582\|Ga0137358_10670287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	694	Open in IMG/M
3300012922\|Ga0137394_10027402	All Organisms → cellular organisms → Bacteria	4610	Open in IMG/M
3300012924\|Ga0137413_11161622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	614	Open in IMG/M
3300012924\|Ga0137413_11651561	Not Available	525	Open in IMG/M
3300012930\|Ga0137407_10828331	Not Available	874	Open in IMG/M
3300012930\|Ga0137407_11461963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	650	Open in IMG/M
3300012971\|Ga0126369_13250800	Not Available	532	Open in IMG/M
3300012989\|Ga0164305_12079086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300013297\|Ga0157378_11184749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	803	Open in IMG/M
3300014969\|Ga0157376_10076146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2866	Open in IMG/M
3300015241\|Ga0137418_10314344	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300015264\|Ga0137403_10013254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9012	Open in IMG/M
3300017947\|Ga0187785_10712234	Not Available	528	Open in IMG/M
3300018028\|Ga0184608_10016112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2640	Open in IMG/M
3300018066\|Ga0184617_1080935	Not Available	881	Open in IMG/M
3300018076\|Ga0184609_10330479	Not Available	712	Open in IMG/M
3300018433\|Ga0066667_10705451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	847	Open in IMG/M
3300018468\|Ga0066662_11687408	Not Available	662	Open in IMG/M
3300020170\|Ga0179594_10089469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300020170\|Ga0179594_10171879	Not Available	807	Open in IMG/M
3300021073\|Ga0210378_10294071	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300021078\|Ga0210381_10069533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	1095	Open in IMG/M
3300022756\|Ga0222622_11221251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300026088\|Ga0207641_12194476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	552	Open in IMG/M
3300027273\|Ga0209886_1024449	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300027383\|Ga0209213_1039889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	887	Open in IMG/M
3300027646\|Ga0209466_1013597	Not Available	1714	Open in IMG/M
3300027646\|Ga0209466_1087733	Not Available	628	Open in IMG/M
3300027716\|Ga0209682_10007910	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300027874\|Ga0209465_10425498	Not Available	664	Open in IMG/M
3300027903\|Ga0209488_10005798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9451	Open in IMG/M
3300027907\|Ga0207428_10061821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2963	Open in IMG/M
3300028536\|Ga0137415_10138538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2273	Open in IMG/M
3300031184\|Ga0307499_10053257	Not Available	998	Open in IMG/M
3300031184\|Ga0307499_10128440	Not Available	723	Open in IMG/M
3300031198\|Ga0307500_10010313	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300031198\|Ga0307500_10043641	Not Available	1061	Open in IMG/M
3300031740\|Ga0307468_100112038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1654	Open in IMG/M
3300031740\|Ga0307468_100931741	Not Available	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.48%
Host-Associated	Host-Associated	9.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.05%
Aquatic	Environmental → Aquatic	11.43%
Plants	Host-Associated → Plants	9.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.05%
Sediment	Environmental → Aquatic → Sediment	6.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.71%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Loam	Environmental → Terrestrial → Soil → Loam	19.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Sand	Environmental → Terrestrial → Soil → Sand	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.81%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.86%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_106469012	3300001686	Soil	MINQMRDHQMKILQAYIDRRNRLWAQIRATYPNYTQPQIEARLEQFGV*
Ga0066397_100559992	3300004281	Tropical Forest Soil	MINQMRDKQLKILQAYIDRRNRLWVQIKTANPTYTQFEIEARLEQFGA*
Ga0066395_104669012	3300004633	Tropical Forest Soil	MINQMHDKQLKILQAYIDRRNRLWAQIKAANPTYTQLDVEARLEQFGA*
Ga0062383_102822412	3300004778	Wetland Sediment	EGSMINQMREFKHSKILQAYIDRRNRLWAQIRVAHPTYTPLDIEARLEQLGA*
Ga0062378_100009443	3300004780	Wetland Sediment	MINQMREFKHSKILQAYIDRRNRLWAQIRVAHPTYTPLDIEARLEQLGA*
Ga0066685_108747531	3300005180	Soil	MINQMRDKQLKILQAYIERRNRLWVQIKTANPTYTQFDIEARLEQFGA*
Ga0066388_1000126403	3300005332	Tropical Forest Soil	MINQMRDKQLKILQAYIDRRNRLWEQIKIANPTYTQVDIEARLEQFGA*
Ga0066388_1002926591	3300005332	Tropical Forest Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKAAHPSYTQPEIEARLEQFGA*
Ga0066388_1003145742	3300005332	Tropical Forest Soil	MINQMRDYQTKILQSHIDRRNRLWAQIKAAHPSYTLPEIEARLEQFGA*
Ga0066388_1018077532	3300005332	Tropical Forest Soil	MINQMRDKQLKILQAYIERRNRLWEQIKVANPSYTQIEVEARLEQFGA*
Ga0066388_1032492702	3300005332	Tropical Forest Soil	MINQMRDQQMKILQAYIERRNRLWAQIKAANPTYTQFDIEARLEQFGA*
Ga0066388_1039465161	3300005332	Tropical Forest Soil	MINQMRDQQMKILQAYVDRRNRLWAQVKAAHPSYTQPEIEARLEQFGA*
Ga0066388_1052144691	3300005332	Tropical Forest Soil	SIELEGSMINQMRDQQMKILQAYVDRRNRLWAQIKATHPTYTQPEIEARLEQFGA*
Ga0070705_1005300051	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0066705_105342662	3300005569	Soil	MINQMRDHQMKTLQAYIDRRNRLWAQIKSTYPTYTQTEIEARLEQFGA*
Ga0066905_1000038992	3300005713	Tropical Forest Soil	MINQMRDKQLKILQAYIERRNRLWEQIKVANPTYTQIEVEARLEQFGA*
Ga0066905_1000939722	3300005713	Tropical Forest Soil	MIKMRQSWQSKTLQAFIDRRNRLWAQVKADHPAYTQAEIEARMEQFGA*
Ga0066905_1004999202	3300005713	Tropical Forest Soil	MINQMRDKQLKVLQAYIERRNRLWVQIKTANPTYTQFDIEARLEQFGA*
Ga0066903_1030310152	3300005764	Tropical Forest Soil	MINQMRDQQMKILQAYIDRRNRLWAQIKATHPTYSQPEIEARLEQFGA*
Ga0074472_100131892	3300005833	Sediment (Intertidal)	MINQMRERQWKILQASIDRRNRLWAQLRAAHPSFTPVEIEARLEQLGA*
Ga0074472_100279283	3300005833	Sediment (Intertidal)	MINQMREFKHSKILQAYIDRRNRLWAQIRVANPTYTQHDIEARLEQLGA*
Ga0074472_102234882	3300005833	Sediment (Intertidal)	MINQVREYKQSKMLQAHIDRRNRLWAQVRAAYPTYSQAEIEARLEQFGA*
Ga0075298_10363201	3300005880	Rice Paddy Soil	MINQMRERQLKILRAYVERRNRLWSQVRIANPTFTQLQVEARLEQFGA*
Ga0081455_103256272	3300005937	Tabebuia Heterophylla Rhizosphere	MINQMRDKQLKVLQAYIERRNRLWEQIKVANPTYTQIEVEARLEQFGA*
Ga0081540_11402471	3300005983	Tabebuia Heterophylla Rhizosphere	AYIDRRIRLWAQIKAAHPTYSQPEIEARLEQFGA*
Ga0070715_107281451	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MINQMRDHQMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0079221_111862721	3300006804	Agricultural Soil	IELEGSMINQMRDHQMKILQAYIDRRNRLWSQIKAAHPSYTQPEIEARLEQFGA*
Ga0079220_119022881	3300006806	Agricultural Soil	MINQMRDHHMKILQAYIDRRNRLWALIKAAHPSYTQPEIEARLEQFGA*
Ga0075421_1023939161	3300006845	Populus Rhizosphere	MINQMRDHQMKILQAYIDRRNRLWAQIKAAHPTYSQPEIEARLEQFGA*
Ga0066710_1014762902	3300009012	Grasslands Soil	MINQMRDKQLKILQAYIERRNRLWVQIKTANPTYTQFDIEARLEQFGA
Ga0099827_103070492	3300009090	Vadose Zone Soil	VSIELEGSMINQMRDHQMKILQAYIDRRNRLWAQIKAAYPTYTQPEIEARLEQFGV*
Ga0111539_101182472	3300009094	Populus Rhizosphere	MINQMRDHQMKILQAYIDRRNRLWTQIKAAHPTFTQPEIEARLEQFGA*
Ga0066709_1002206281	3300009137	Grasslands Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKATYPTYTQPEIEARLEQFGA*
Ga0099792_100634372	3300009143	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKAACPTYTQPEIEARLEQFGV*
Ga0114129_130904511	3300009147	Populus Rhizosphere	RARVSIELEGSMINQMRDHQMKILQAYIDRRNRLWTQIKAAHPTFTQPEIEARLEQFGA*
Ga0105065_10804831	3300009803	Groundwater Sand	MRESTQSKILQTYIDRRNRLWVQVKAANPTYTLGQVEARLEQLGA*
Ga0126380_101672221	3300010043	Tropical Forest Soil	MINQMRDHQIKILQAHIDRRNRLWAQIKTAYPSYTQPEIEARLEQFGA*
Ga0126380_107730342	3300010043	Tropical Forest Soil	MINQMRDHQLKILQAYIDRRNRLWVQIKAANPAYTQPEIEARLEQFGA*
Ga0126384_112467511	3300010046	Tropical Forest Soil	MINQMRDHQMKILQAHIDRRNRLWAQIKTAHPSYTQPEIEARLEQFGA*
Ga0126384_118087031	3300010046	Tropical Forest Soil	SIELEGSMINQMRDKQLKILQAYIERRNRLWEQIKVANPTYTQLDIEARLEQFGA*
Ga0126384_122906211	3300010046	Tropical Forest Soil	SNLEGSMINQMRDHQMKILQAYIDRRNRLWTQIKAAHPTYTQPEIEARLEQFGA*
Ga0126382_101573472	3300010047	Tropical Forest Soil	MINQMRDHQLKILQAYIDRRNRLWVQIKAANPAYTQPEIEARLEQFGV*
Ga0126370_114269541	3300010358	Tropical Forest Soil	MINQMHDKQLKILQAYIDRRNRLWAQIKTANPTYTQFELEARLEQFGA*
Ga0126370_118039752	3300010358	Tropical Forest Soil	MINQMRDRQMKILQAHIDRRNRLWAQIKTAYPSYT
Ga0126376_102195401	3300010359	Tropical Forest Soil	MVNKRDHSQKRLQAYIERRNRLWVQIKAAHPAFTPAEIDARLEVFGA*
Ga0126376_131094061	3300010359	Tropical Forest Soil	MIKVRQSWQSKTLQAFIDRRNRLWAQVKADHPAYTQAEIEARMEQFGA*
Ga0126372_108415922	3300010360	Tropical Forest Soil	MINQMRDQQIKILQAYIERRNRLWAQIKAANPTYTQFDIEARLEQFGA*
Ga0126372_113780402	3300010360	Tropical Forest Soil	MINQMRDQLKILQAYIDRRNRLWAQIKAAHPSYTQPEIEARLEQFGA*
Ga0126372_123658871	3300010360	Tropical Forest Soil	MINQMRDQQMKILQAYIDRRNRLWAQIKATHPSYTQPEIEARLEQFGA*
Ga0126377_100184906	3300010362	Tropical Forest Soil	FEDLVSNARVRLSIELEGSMINQMRDKQLKILQAYIERRNRLWEQIKVANPSYTQIEVEARLEQFGA*
Ga0126377_101156262	3300010362	Tropical Forest Soil	NFISNARARVSIELEGSMINQMRDHQMKILQVHIDRRNRLWAQIKTAHPSYTQPEIEARLEQFGA*
Ga0126377_118255951	3300010362	Tropical Forest Soil	MINQMRDKQLKILQAYIERRNRLWEQIKIANPTYTQVDIEARLEQFGV*
Ga0126377_135808081	3300010362	Tropical Forest Soil	QLKILQAYIDRRNRLWVQIKTANPTYTQFEIEARLEQFGA*
Ga0126377_135933892	3300010362	Tropical Forest Soil	NARARVSIELEGSMINQMRDHQMKILQAYIDRRNRLWAQIKAAHPSYTQPEIEARLEQFGA*
Ga0134124_100450491	3300010397	Terrestrial Soil	GFHFDSFGSNARARVSIELEGSMINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0134124_125774822	3300010397	Terrestrial Soil	LQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0126383_123863541	3300010398	Tropical Forest Soil	QMRDKQLKILQAYIDRRNRLWVQIKTANPTYTQFEIEARLEQFGA*
Ga0134122_103228982	3300010400	Terrestrial Soil	VNIESEGSMINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0137383_111686061	3300012199	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWTQIKAAYPTYTQPEIEARLEQFGA*
Ga0137399_115761491	3300012203	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWVQIKAAYPTYTQPEIEARLEQFGV*
Ga0137380_115014521	3300012206	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKSAYPTYTQPEIEARLEQFGA*
Ga0137378_116574051	3300012210	Vadose Zone Soil	MINQRRDHQMKILQAYIDRRNRLWVQIKAAYPTYTQPEIEA
Ga0137387_111176492	3300012349	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWVQIKAAYPTYTQPEIEARLEQFGA*
Ga0137385_102222842	3300012359	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQINSAYPTYTPPEIEARLEQFGA*
Ga0137360_110340931	3300012361	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWTQIKAAYPTYTQPEIEARLEQFGV*
Ga0137358_106702872	3300012582	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKAAYPTYTQPEIEARLEQFGV*
Ga0137394_100274023	3300012922	Vadose Zone Soil	MINQMRDHQMKILQAYVDRRNRLWAQIKAAYPTYTQPEIEARLEQFGA*
Ga0137413_111616221	3300012924	Vadose Zone Soil	MINQMRNHQLKILQAYIDRRNRLWAQIKAACPTYTQPEIEARLEQFGA*
Ga0137413_116515611	3300012924	Vadose Zone Soil	SNARARVSIELEGSMINQMRDHQMKILQAYIDRRNRLWAQIKAACPTYTQPEIEARLEQFGV*
Ga0137407_108283311	3300012930	Vadose Zone Soil	MINQMRYKQMKILQAYIERRNRLWVQIKTANPTYTQFDIEARLEQFGA*
Ga0137407_114619631	3300012930	Vadose Zone Soil	RSNGRARLNIELEGSMINQMRDKQLKILQAYIERRNRLWVQIKTANPTYTQFDIEARLEQFGV*
Ga0126369_132508001	3300012971	Tropical Forest Soil	QMRDQQMKILQAYIDRRNRLWAQIKTAYPSYTQPEIEARLEQFGA*
Ga0164305_120790862	3300012989	Soil	GFHFDSFVSNARARVNIESEGSMINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0157378_111847491	3300013297	Miscanthus Rhizosphere	HHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0157376_100761462	3300014969	Miscanthus Rhizosphere	VSIELEGSMINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA*
Ga0137418_103143442	3300015241	Vadose Zone Soil	VSIELEGSMINQMRDHQMKILQAYIDRRNRLWTQIKAAYPTYTQPEIEARLEQFGA*
Ga0137403_100132545	3300015264	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKAAYPTYTKPEIEARLEQFGA*
Ga0132258_116210151	3300015371	Arabidopsis Rhizosphere	MVTQVQDSKQSKTLQAYIARRDHLWVRVKADHPTYSHAQIEARLEQFGA*
Ga0187785_107122341	3300017947	Tropical Peatland	MINQMRDHQTKILQAYIDRRNRLWAQIKAAHPGFTQPEIEARLEQFGA
Ga0184608_100161122	3300018028	Groundwater Sediment	MINQMRNHQLKNLQAYIDRRNRLWAQIKAAFPTYTQPEIEARLEQFGA
Ga0184617_10809351	3300018066	Groundwater Sediment	MINQMRNHQLKNLQAYIDRRNRLWAQVRAAYPNYTQPEIEARLEQFGA
Ga0184609_103304792	3300018076	Groundwater Sediment	MRLVRLSIELEGSMINQMRNHQLKILQAYIDRRNRLWAQIKAAFPTYTQPEIEARLEQFG
Ga0066667_107054512	3300018433	Grasslands Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKSTYPTYTQTEIEARLEQFGA
Ga0066662_116874081	3300018468	Grasslands Soil	MINQMRDHQMKILQAYVDRRNRLWAQIKAAYPTYTQREIEARLEQFGA
Ga0179594_100894691	3300020170	Vadose Zone Soil	MINQMRNHQMKILQAYIDRRNRLWAQIKAAHPSYTKPEIEARLEQFGV
Ga0179594_101718791	3300020170	Vadose Zone Soil	MINQMRDHQMKILQAYVDRRNRLWAQIKAAYPTYTQPEIEARLEQFGA
Ga0210378_102940711	3300021073	Groundwater Sediment	MINQMRELKHSKILQAYIDRRTRLWVQIRVANPTYTQPDIEARLEQLGA
Ga0210381_100695331	3300021078	Groundwater Sediment	MINQMRNHQLKILQAYIDRRNRLWAQIKAAYPTYTQPEIEARLEQFGA
Ga0222622_112212512	3300022756	Groundwater Sediment	FVSNACARVNIELEGSMINQMRDHQMKILQAYIERRNRLWAHIKAAYPTYTQPEIEARLEQFGV
Ga0207641_121944762	3300026088	Switchgrass Rhizosphere	ETFVSNARARVNIESEGSMINQMRDHHMKILQAYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA
Ga0209886_10244492	3300027273	Groundwater Sand	MINQVREPRQSKTLQAYIDRRNRLWTQVKADNPAYTQAEIEARLEQFGA
Ga0209213_10398892	3300027383	Forest Soil	MINQMRDHQMKILQAYIDRRNRLSAQIKAAYPTYTQPEIEARLEQFGV
Ga0209466_10135971	3300027646	Tropical Forest Soil	MINQMRDKQLKILQAYIERRNRLWEQIKVANPTYTQIEVEARLEQFGA
Ga0209466_10877331	3300027646	Tropical Forest Soil	NTRVRLSIELEGSMINQMRDKQLKILQAYIDRRNRLWVQIKTANPTYTQFEIEARLEQFG
Ga0209682_100079101	3300027716	Wetland Sediment	MINQMREFKHSKILQAYIDRRNRLWAQIRVAHPTYTPLDIEARLEQLGA
Ga0209465_104254982	3300027874	Tropical Forest Soil	MINQMHDKQLKILQAYIDRRNRLWAQIKAANPTYTQLDVEARLEQFGA
Ga0209488_100057983	3300027903	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWAQIKAACPTYTQPEIEARLEQFGV
Ga0207428_100618212	3300027907	Populus Rhizosphere	MINQMRDHQMKILQAYIDRRNRLWTQIKAAHPTFTQPEIEARLEQFGA
Ga0137415_101385382	3300028536	Vadose Zone Soil	MINQMRDHQMKILQAYIDRRNRLWTQIKAAYPTYTQPEIEARLEQFGA
Ga0307499_100532572	3300031184	Soil	MINQMRDHQMKILQAYIERRNRLWAHIKAAYPTYTQPEIEARLEQFGV
Ga0307499_101284401	3300031184	Soil	DFISNAGVRLSIELEGSMINQIRDRQMKILQAYVDRRNRLWAQIKATHPSYTQREIEARLEQFGA
Ga0307500_100103131	3300031198	Soil	MINQIRDRQMKILQAYVDRRNRLWAQIKATHPSYTQREIEARLEQFGA
Ga0307500_100436412	3300031198	Soil	MINQMRDHQMKILQVYIDRRNRLWAQIKAAYPTYSQPEIEARLEQFGA
Ga0307468_1001120382	3300031740	Hardwood Forest Soil	MINQMRDKQLKILQAYIERRNRLWVQIKIANPTYTQFDIEARLEQFGA
Ga0307468_1009317411	3300031740	Hardwood Forest Soil	MINQMRDHQMKILQAYIDRRNRLWMQIKAAYPTYTQREIEARLEQFGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences