Basic Information | |
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Family ID | F096068 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 105 |
Average Sequence Length | 55 residues |
Representative Sequence | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEID |
Number of Associated Samples | 87 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 39.05 % |
% of genes from short scaffolds (< 2000 bps) | 35.24 % |
Associated GOLD sequencing projects | 83 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (78.095 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater (25.714 % of family members) |
Environment Ontology (ENVO) | Unclassified (73.333 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (69.524 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 20.75% β-sheet: 13.21% Coil/Unstructured: 66.04% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Marine Oceanic Marine Seawater Marine Seawater Sackhole Brine Estuary Water Marine Seawater Estuarine Marine Marine Estuarine Pelagic Marine Diffuse Hydrothermal Flow Volcanic Vent Seawater Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
LPaug09P16500mDRAFT_10081821 | 3300000142 | Marine | MALLEDVVDFCKKELKIPQEILVSVEIEDISEDNVKGWTTDSAEDDEYDI |
LPjun09P16500mDRAFT_10467351 | 3300000179 | Marine | MALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGL |
LPjun08P4500mDRAFT_10449571 | 3300000181 | Marine | MALLKDVVDFCKIELNIPKDILVSVEIEDISEDNVKGWTTDSAEDDEYDIEI |
SI34jun09_120mDRAFT_10048971 | 3300000225 | Marine | MAFLEDVVLFCKRELNIPEEILVSIEQEDIYEDNVKGWTTDSAEDDEYDIEIDTHLGFKEAIIT |
SI36aug09_100mDRAFT_10075341 | 3300000238 | Marine | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYD |
SI34jun09_100mDRAFT_10200711 | 3300000254 | Marine | MAFLEDVVLFCKRELNIPEEILVSIEQEDIYEDNVKGWTTDSAEDDEYDIEIDTHLG |
LP_A_09_P04_1300DRAFT_10301271 | 3300000262 | Marine | MALLKDIVDFCKTELNIPQEVLVSVEVEDLSEDNVKGWTTDSAEDDEYDIEIDTRLSFKETIL |
LP_A_09_P04_500DRAFT_10466562 | 3300000264 | Marine | MALYEDIITFCKKELNIPQDILISIEQEDLSEDNVHGWTTDSAEDDEYDIEIDTGLGFKEAIL |
BBAY93_101505121 | 3300000973 | Macroalgal Surface | MALLEDIVNFCKKELSIPQEILVSVEVEDISEDNV |
JGI12074J15755_10025191 | 3300001584 | Deep Ocean | MALYEDIVLFCKRELNIPLDILISVEQADLSEDSVKGWAIDS |
JGI26114J46594_10646433 | 3300003271 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDVLVSVAVEDISEDNVKGWTVDSAEDDEYDIEIDTGLGFKE |
FS891DNA_101309865 | 3300003539 | Diffuse Hydrothermal Flow Volcanic Vent | MALLKDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDEYDIEIDSRLSFKETILTV |
FS896DNA_100992273 | 3300003540 | Diffuse Hydrothermal Flow Volcanic Vent | VEKIMALLEDIVDFCKKELKIPQDILVSVEREDISEDNVKGWT |
Ga0066837_100483781 | 3300005593 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDILVSVAVEDISEDNVKGWTVDSAEDDEYDIEIDTGLGFKETIITVCHEMV |
Ga0066833_100472914 | 3300005595 | Marine | MALYEDIVLFCKRELNIPLDILISVEQADLSEDSVKGWAIDSAEDDEYDIEIDTGLGFKEAIITVCHEMVH |
Ga0066842_100965541 | 3300005658 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDILVSVAVEDISEDNVKGLTVDSAEDDEYDIE |
Ga0070743_102230233 | 3300005941 | Estuarine | MALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSA |
Ga0082019_10315631 | 3300006093 | Marine | MALYEDIVLFCKRELNIPLDILISVEQADLSEDSVKGWAIDSAEDDEYD |
Ga0075441_100671011 | 3300006164 | Marine | MAYLEDVVLFCKKELNIPDEILVSLETEDLSEDNVK |
Ga0098033_10172708 | 3300006736 | Marine | MALYEDIITFCKKELNIPQDVLVSIEQEDLSEDSVKGWAIDSAEDDEYDIEIDTGLGFK |
Ga0098033_11571461 | 3300006736 | Marine | MALYEDIVLFCKRELNIPLDILISVEQEDLSEDSVKGWAIDSAEDDEYDIEIDTGLGFKEAIITV |
Ga0098057_10321975 | 3300006926 | Marine | MALYEDIVTFCKKELNIPQDVLVSIEQEDLSEDNVHGWTTDS |
Ga0102861_12058201 | 3300007544 | Estuarine | VEVTMALLEDIVDFCKKELNIPQEILVSVEVEDIS |
Ga0102906_10342931 | 3300007637 | Estuarine | MEVTMALLEDIVDFCKKELEIPQDILVSVEREDISE |
Ga0102906_11044204 | 3300007637 | Estuarine | VEVTMALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDT |
Ga0105741_11066653 | 3300007956 | Estuary Water | MEVTMALLEDIVDFCKKELKIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKETIL |
Ga0102887_11586541 | 3300008961 | Estuarine | MEVTMALLEDIVDFCKKELNIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLGF |
Ga0102813_10829654 | 3300009003 | Estuarine | VEKIMALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEY |
Ga0102812_107010753 | 3300009086 | Estuarine | MEVTMALLEDIVDFCKKELKIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKETILTLC |
Ga0117901_12339071 | 3300009103 | Marine | MALLEDIVNFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFK |
Ga0114994_107909833 | 3300009420 | Marine | MALLEDVVVFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKESII |
Ga0115008_101283501 | 3300009436 | Marine | MEVTMALLEDIVDFCKKELKVPQEILVSVEVTDISEDNVKGWTTDSAEDDEYDIEIDTGL |
Ga0115008_105764234 | 3300009436 | Marine | MEVTMALLEDIVDFCKKELSIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSF |
Ga0115007_105680781 | 3300009441 | Marine | MEVHMALLEDVMLFCKKELNIPDEILVSIEQEDISEDNVKGWTTDSAEDDEYDIEIDTHL |
Ga0115007_112809752 | 3300009441 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEI |
Ga0105236_10602473 | 3300009619 | Marine Oceanic | MEVTMALLEDIVDFCKKELSIPQDVLISVEREDISEDNVRGWTTDSAEDDEYDIEIDTRLGFKETI |
Ga0115000_104494275 | 3300009705 | Marine | MALLEDVVLFCKKELNIPEEILVSIEQEDIIEDNVKGW |
Ga0115002_109662171 | 3300009706 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHL |
Ga0098047_103106971 | 3300010155 | Marine | MALYEDIVLFCKRELNIPLDILISVEQADLSEDSVKGWAIDSAEDDEYDIEIDTGLGFKEAIIT |
Ga0181377_10614204 | 3300017706 | Marine | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNV |
Ga0181397_11800373 | 3300017744 | Seawater | MALLEDIVDFCKKELSIPQEILVSIEVEDISEDNVKGWTTDSAEDDEYDIEI |
Ga0181420_11701921 | 3300017757 | Seawater | MALLEDIVDFCKKELSIPQEILVSIEVEDISEDNVKGW |
Ga0181430_11660161 | 3300017772 | Seawater | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDE |
Ga0181432_10964074 | 3300017775 | Seawater | VVKVENSGGTMALYEDIITFCKKELSIPQDVLVSIEQEDLSEDNV |
Ga0181432_12653061 | 3300017775 | Seawater | MALLEDIVDFCKKELSIPQDILVSVEREDISEDNVKGWTTDSAEDDEYDIEIDAR |
Ga0211656_100100761 | 3300020375 | Marine | MALLEDVVDFCKIELNIPQEVLVSVEVEDISEDNVKGWTTD |
Ga0211646_103323861 | 3300020383 | Marine | MALLEDIVDFCKKELSIPQDVLVSVEREDISEDNVKGWTTDSAEDDEY |
Ga0211680_102680763 | 3300020389 | Marine | MALLEDIVDFCKIELNIPKDVLVSVEIEDISEDNVKGWTTDSAEDDEYDIEIDTGLGFKETILT |
Ga0211576_100844361 | 3300020438 | Marine | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLGFKETILTLCH |
Ga0206684_11033531 | 3300021068 | Seawater | MALLEDIVDFCKKELNIPQEVLVSVEVEDISEDNVKGWTTDSAEDDE |
Ga0206678_101396974 | 3300021084 | Seawater | MALLEDIVDFCKIELNIPKDVLVSVEIEDISEDNVKGWTTDSAEDD |
Ga0206678_105024551 | 3300021084 | Seawater | MEVTMALLEDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDE |
Ga0206683_103165174 | 3300021087 | Seawater | MALLEDVIDFCKIELNIPQEVLVSVEVEDISEDNVKGWTTDS |
Ga0206682_103021791 | 3300021185 | Seawater | MALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLGFKE |
Ga0206682_104474541 | 3300021185 | Seawater | MALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEI |
Ga0206680_101055281 | 3300021352 | Seawater | MALLEDIVDFCKKELNIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTG |
Ga0206681_100424591 | 3300021443 | Seawater | MALYEDIVTFCKKELNIPPDVLVSIEQEDLSEDNVHGWTTDSAEDDEYDIEIDTRLGFKEAI |
Ga0206681_102757981 | 3300021443 | Seawater | MALYEDIITFCKKELNIPQDVLVSIEQEDLSEDNVHGWTTDSAEDDEYDI |
Ga0228695_10680931 | 3300023699 | Seawater | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTRLSFKETI |
Ga0228637_10816033 | 3300024192 | Seawater | MALLEDIVDFCKKELSIPKEILVSIEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKE |
(restricted) Ga0233442_11525041 | 3300024257 | Seawater | MALLEDIVDFCKKELKIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEID |
Ga0228623_11045791 | 3300024267 | Seawater | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKETILTLCHEMV |
Ga0244777_106245053 | 3300024343 | Estuarine | MALYEDIITFCKKELNIPQDILISIEQEDLSEDNVHGWTTDSAEDDEYDIEI |
Ga0244776_102516831 | 3300024348 | Estuarine | MALLEDIVDFCKKELNIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLGF |
Ga0208669_10403661 | 3300025099 | Marine | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKE |
Ga0209631_101790225 | 3300025890 | Pelagic Marine | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEI |
Ga0207986_10217217 | 3300026192 | Marine | MALYEDIITFCKKELNIPQDVLVSIEQEDLSEDSVKGWAIDSAEDDEYDIEIDTGLGFKEAILTVCHEM |
Ga0208522_10422701 | 3300026254 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDILVSVAVEDISEDNVKGWTVDSAEDDE |
Ga0208764_104382583 | 3300026321 | Marine | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLSFKETILTLCH |
Ga0233395_11604441 | 3300026511 | Seawater | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEID |
Ga0208941_10338203 | 3300027077 | Marine | MALLEDIVDFCKKELKIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIE |
Ga0208680_10877593 | 3300027253 | Estuarine | MALLEDIVDFCKKELNIPQEILVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTRLSFKETILTVCHE |
Ga0208970_10503454 | 3300027298 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDVLVSVAVEDISEDNVKGWTVDSAEDDEYDIEIDTGLGFK |
Ga0208949_10432154 | 3300027315 | Marine | MIQEVTMALLEDVVNFCKKELSIPQDILVSVAVEDISEDNVKGWTVDSAEDDEYDIEIDT |
Ga0208948_10895801 | 3300027501 | Marine | MALLEDIVDFCKKELEIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTG |
Ga0209711_102131901 | 3300027788 | Marine | MALLEDVVVFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKESIITVCHEMV |
Ga0209302_101055681 | 3300027810 | Marine | MALLEDVMLFCKKELNIPDEILVSIEQEDISEDNVKGWTTDSAEDDEYDIEIDTHLGFKEAIITVCHEMV |
Ga0209092_102355114 | 3300027833 | Marine | MALLEDIVDFCKKELKVPQEILVSVEVTDISEDNVKGWTTDSAEDDEYDIEIDTGLG |
Ga0308025_12306021 | 3300031143 | Marine | MAYLEDVVLFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKEAIITVCHEMVH |
Ga0307488_103654243 | 3300031519 | Sackhole Brine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNV |
Ga0307996_11431981 | 3300031589 | Marine | MALLEDVVLFCKRELKIPDEILVSIEQEDIYEDNVKGWTTDSAEDDEYDIEIDTHLGFKEAIITVC |
Ga0302132_103997062 | 3300031605 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKE |
Ga0307999_10438095 | 3300031608 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKESIITVCHEMV |
Ga0308014_10608285 | 3300031628 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFK |
Ga0307985_103457511 | 3300031629 | Marine | MALLEDVVLFCKKELNIPDEILVSLETEDLSEDNVKGWTV |
Ga0307994_12090443 | 3300031660 | Marine | MALLEDVVIFCKKELNIPDEILVSLETEDLSEDNVKGWTTDSAEDDEYDIEIDTHLGFKESIITVCHEMVH |
Ga0308006_101637511 | 3300031683 | Marine | MALLEDVVLFCKRELNIPEEILVSIESEDISEDNVKGWTTDSAED |
Ga0315332_101145651 | 3300031773 | Seawater | MIQEVTMALLEDVVNFCKKELSIPQDILVSVAVEDISEDNVKGWTVDSAEDDEYDIEIDTGLGFKETI |
Ga0315319_102147651 | 3300031861 | Seawater | MALLEDVIDFCKIELNIPQEVLVSVEVEDISEDNVKGWTTDSAENDEYDIEIDTGLGF |
Ga0315318_100811331 | 3300031886 | Seawater | MEVTMALLEDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDEYDIEIDTRLSFKETILTV |
Ga0315324_100187401 | 3300032019 | Seawater | MEVTMALLEDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDEYDIEIDARLSFKETILTVCHEMVH |
Ga0315327_1001386310 | 3300032032 | Seawater | MALLEDIVDFCKKELEIPQDILVSVEREDISEDNVKGWT |
Ga0315327_102405854 | 3300032032 | Seawater | MALLEDIVDFCKKELSIPQEILVSVEVEDISEDNVKGWTTDSAEDDEY |
Ga0315329_100232971 | 3300032048 | Seawater | MALYEDIITFCKKELNIPQDVLVSIEQEDLSEDNVHGWTTDSAE |
Ga0315329_101777591 | 3300032048 | Seawater | MALLEDIVDFCKKELEIPQDILVSVEREDISEDNVKGWTTDSAEDDEYDIEIDTRLSFKE |
Ga0315329_102127231 | 3300032048 | Seawater | MEVTMALLEDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDEYDIEIDARLSFKETILTVCHEMV |
Ga0315329_105474743 | 3300032048 | Seawater | MALYEDIVLFCKKELNIPQDILISIEQEDLSEDNVKGWTTDSAEDDEYDIEIDTRLG |
Ga0315329_107047851 | 3300032048 | Seawater | MALYEDIITFCKKELNIPQDILISIEQEDLSEDNVHGWTTDSAEDDEYDIEIDTGLGFKEAI |
Ga0315333_100766845 | 3300032130 | Seawater | MALLEDIVDFCKKELNIPQEVLVSVEVEDISEDNVKGWTTDSAEDDEYDIEIDTGLGFKETILTVCHEMVHV |
Ga0315333_104993613 | 3300032130 | Seawater | MALLEDIVDFCKTELNIPKDVLVSVETEDISEDNVKGWTTDSAEDDEYDIE |
Ga0315334_102318365 | 3300032360 | Seawater | MALYEDIVTFCKKELNIPPDVLVSIEQEDLSEDNVHGWTTDSAEDDEYDIE |
Ga0315334_105341184 | 3300032360 | Seawater | MIQEVTMALLEDVVNFCKKELSIPQDVLVSVAVEDISEDNVKGW |
Ga0315334_106631304 | 3300032360 | Seawater | MALLKDIVDFCKTELNIPQEVLVSVEVEDLSEDNVKGWTTDSAEDDEYD |
Ga0315334_115164541 | 3300032360 | Seawater | MALYEDIITFCKKELNIPQDVLVSIEQEDLSEDSVKGWTIDSAEDDEYDIEI |
Ga0315334_117800631 | 3300032360 | Seawater | MALYEDIVLFCKKELNIPQDVLVSIEQEDLSEDNVHGWTTDSAEDDEYDIEIDT |
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