Basic Information | |
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Family ID | F096039 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 53 residues |
Representative Sequence | MNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Number of Associated Samples | 56 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 72.12 % |
% of genes near scaffold ends (potentially truncated) | 14.42 % |
% of genes from short scaffolds (< 2000 bps) | 74.29 % |
Associated GOLD sequencing projects | 43 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.56 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Predicted Viral (45.192 % of family members) |
NCBI Taxonomy ID | 10239 (predicted) |
Taxonomy | All Organisms → Viruses → Predicted Viral |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.905 % of family members) |
Environment Ontology (ENVO) | Unclassified (60.952 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (93.333 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.72% β-sheet: 24.05% Coil/Unstructured: 58.23% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.56 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Marine Oceanic Marine Surface Seawater Marine Seawater Marine Seawater Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25128J35275_10247863 | 3300002488 | Marine | MQDDEGTLISEMLTLTALLGGKMERTEVYESKGRQYKKIVIEYDSQEWVRNEI* |
JGI25128J35275_10459994 | 3300002488 | Marine | MNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWVRNEI* |
Ga0066856_1000602810 | 3300005404 | Marine | MNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYERNEI* |
Ga0066856_100347762 | 3300005404 | Marine | MNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDEKEWKRNE* |
Ga0066856_100471123 | 3300005404 | Marine | MDNRSTSEENQMSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND* |
Ga0066856_101491132 | 3300005404 | Marine | MENDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI* |
Ga0066856_102086753 | 3300005404 | Marine | MTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI* |
Ga0066371_101706662 | 3300006024 | Marine | MNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI* |
Ga0066836_100476386 | 3300006166 | Marine | MTFNDGDLIAELLTITAEMGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL* |
Ga0100228_11800523 | 3300006565 | Marine | MTTEEDKFHKLPEGDLIAELLCISGELGGTMERREVYESQGRKYKKIVIEYDSQEWVRNEI* |
Ga0100228_13273901 | 3300006565 | Marine | MNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSTEWKRNEI* |
Ga0100228_13992451 | 3300006565 | Marine | MNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI* |
Ga0098038_10351064 | 3300006735 | Marine | MSNGDLIAELLVITAELGGKMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK* |
Ga0098038_11578122 | 3300006735 | Marine | MNDGDLIAELLAITAELGGTMERREVYESTGRQYKKIVIEYDSTEWERNEI* |
Ga0098042_10057666 | 3300006749 | Marine | MSNGDLIAELLVITAELGGSMERTEVYESTGRQYKKIVIEYDVKEWERNHKANLK* |
Ga0098040_10049579 | 3300006751 | Marine | MTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNEI* |
Ga0098040_10852892 | 3300006751 | Marine | MRNQMNDGDLIAELLTITAELGGKMERREVYESTGRKYKKIVIKYDSQEWVRNEI* |
Ga0098041_10058218 | 3300006928 | Marine | MSRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV* |
Ga0098041_10202246 | 3300006928 | Marine | MSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK* |
Ga0098041_10791804 | 3300006928 | Marine | MNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI* |
Ga0111541_100937592 | 3300008097 | Marine | MSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWKRND* |
Ga0111541_101230265 | 3300008097 | Marine | MVNDSDLIEELRTIAEGLGGTMDRIDGYKSEGRQYKKIVIEYDSREWKRNEI* |
Ga0114932_1000393413 | 3300009481 | Deep Subsurface | MANDSDLIQELRTIVERLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI* |
Ga0114932_108218212 | 3300009481 | Deep Subsurface | MSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDEKEWERNV* |
Ga0115011_101142594 | 3300009593 | Marine | MNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV* |
Ga0115011_101578115 | 3300009593 | Marine | MRNQMNDGDLIAELLTITAELGGKMERREVYESTGRQYKKIVIEYDSQEWKRNEI* |
Ga0115011_104368462 | 3300009593 | Marine | MNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV* |
Ga0115012_101376314 | 3300009790 | Marine | MSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND* |
Ga0115012_101870501 | 3300009790 | Marine | MTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEW |
Ga0115012_104923193 | 3300009790 | Marine | GDLISELLTITALLGGTMERQDVYDSTGRQYKKIVIKYDEKGWERNEI* |
Ga0115012_108051212 | 3300009790 | Marine | MKMHDDEGTLISEMLTLTDLLGGRMERTEVYESKGRQYKKIVIEYDSKEWKRNEV* |
Ga0105189_10123893 | 3300009794 | Marine Oceanic | MNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI* |
Ga0105189_10201452 | 3300009794 | Marine Oceanic | MNRQDEGELIAELLCITGELGGKMKRLDCYESTGRRYKKIVIEYDSTEYKRDEV* |
Ga0114934_100063042 | 3300011013 | Deep Subsurface | MVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI* |
Ga0163180_101340822 | 3300012952 | Seawater | MNEGDLIAELLQITAELGGTMERVDGYKSEGRQYKKIVIEYDSKEWKRNEI* |
Ga0163180_101540406 | 3300012952 | Seawater | MENKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYDSAEWERNEI* |
Ga0163180_108304814 | 3300012952 | Seawater | MSNGDLIAELLVITAELGGSMERTEVYESKGRQYKKIVIEYDVKEWERNV* |
Ga0163180_112735022 | 3300012952 | Seawater | MSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWERNHKANLK* |
Ga0163180_114145362 | 3300012952 | Seawater | MNEGDLIAELSKITAKIGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI* |
Ga0163179_105731412 | 3300012953 | Seawater | MNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI* |
Ga0163179_110302331 | 3300012953 | Seawater | MSNGDLIAELLTITAELGGTMERRDVYDSTGRQYKKIVIEYDSAEWERNEI* |
Ga0163179_116409683 | 3300012953 | Seawater | MSNGDLIAELLVITAELGGKMERTEVYESNGRQYKKIVIEYDVEEWERNHKANLK* |
Ga0163111_104892785 | 3300012954 | Surface Seawater | MSNGDLIAELSKITAELGGTMERRDVYDSTGRQYKKIVIEYDVKEWERNEI* |
Ga0181428_11154431 | 3300017738 | Seawater | MVNGSDLIEELRTIAERLGGTIERIDGYKSEGRQYKKIVIEYDSQDWIRNEI |
Ga0181428_11713062 | 3300017738 | Seawater | MKNKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI |
Ga0181414_10408292 | 3300017759 | Seawater | MNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI |
Ga0181413_11833461 | 3300017765 | Seawater | TEHVATQLRSKMNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI |
Ga0181406_11719791 | 3300017767 | Seawater | KRGLMVNGSDLIEELRTIAERLGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI |
Ga0211671_10386962 | 3300020270 | Marine | MSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANVK |
Ga0211520_10024812 | 3300020294 | Marine | MSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDEKEWERNV |
Ga0211515_10624172 | 3300020310 | Marine | MTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNEI |
Ga0211626_11574903 | 3300020343 | Marine | MDNXSTSEEKQMSNGDLIAELLVITAELGGSMERTEVYESKGRQYKKIVIEYDVKEWERN |
Ga0211706_11096112 | 3300020345 | Marine | MNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYERNEI |
Ga0211652_100053453 | 3300020379 | Marine | MNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDLKEWKRNA |
Ga0211652_100857661 | 3300020379 | Marine | MSRQDEADLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRD |
Ga0211652_101504512 | 3300020379 | Marine | MTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI |
Ga0211705_100473283 | 3300020395 | Marine | MNEGDLIAELLQITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Ga0211653_100043625 | 3300020421 | Marine | MNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDLKEWKRNA |
Ga0211653_101117184 | 3300020421 | Marine | MNRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV |
Ga0211576_100002866 | 3300020438 | Marine | MKNKMNDGDLIAELLTITAELGGTMERREVYESTGRQYKKIVIEYDSTEWERNEI |
Ga0211576_101321053 | 3300020438 | Marine | MSNGDLIAELLVITAELGGKMERTEVYESKGRQYKKIVIEYDVEEWERNHKANLK |
Ga0211576_104495741 | 3300020438 | Marine | MVNGSDLIEELRTIAERLGGTMERREVYESTGRQYKKIVIEYNSTEWERNEI |
Ga0211564_10000009103 | 3300020445 | Marine | MTFNDGDLIAELLTITAELGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL |
Ga0211564_100088263 | 3300020445 | Marine | MSNGDLIAELLTITAKLGGTMERRDVYDSKGRQYKKIVIEYDSKEWKRNEI |
Ga0211564_102707462 | 3300020445 | Marine | MNEVNLVSELESITDQLGGNLERITGYRSDGRQYKKIVIEYDLKEWKRNEI |
Ga0211564_103688412 | 3300020445 | Marine | MNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI |
Ga0211564_105736082 | 3300020445 | Marine | MSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIEYDVKEWERNEI |
Ga0211473_101420031 | 3300020451 | Marine | MVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI |
Ga0211548_103759352 | 3300020454 | Marine | MDNXSTSEEKQMSNGDLIAELLVITAELGGSMERTEVYESTGRQYKKIVIEYDEKEWERN |
Ga0211514_100113003 | 3300020459 | Marine | MSNGDLIAELLTITAELGGTMERRDVYDSTGRQYKKIVIEYDSKEWKRNEI |
Ga0211514_102305753 | 3300020459 | Marine | MQDDEGTLISEMLTLTALLGGKMERTEVYESKGRQYKKIVIEYDSQEWVRNEI |
Ga0211694_100423994 | 3300020464 | Marine | MSNGDLIAELLVITAELGGKMERRDVYDSTGRQYKKIVIEYDVKEWKRND |
Ga0211640_101309923 | 3300020465 | Marine | MTTEEDKFHKLPEGDLIAELLCISGELGGTMERREVYESQGRKYKKIVIEYDSQEWVRNE |
Ga0211543_103379673 | 3300020470 | Marine | MSNGDLIAELLVITAELGGTMERLDGCTSDGRQYKKIVIKYDEKEWERNV |
Ga0211579_100090987 | 3300020472 | Marine | MIEYDEGELIAELLCITGELNGKMERIDGYRSDGRQYKKIVIEYDSKEWKRNEI |
Ga0211579_101199076 | 3300020472 | Marine | MKNKMNDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Ga0211579_101692042 | 3300020472 | Marine | MVNGSDLIEELRTIAERLGGTIERIDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Ga0211579_108021143 | 3300020472 | Marine | MTNKINEGDLIAELLTITAELGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEI |
Ga0211579_108533542 | 3300020472 | Marine | MSNGDLIAELLTITAELGGTMERRDVYDSKGRQYKKIVIEYDSKEWKRNEI |
Ga0206682_100630602 | 3300021185 | Seawater | MSNGDLIAELLIITAELGGKMERRDVYDSTGRQYKKIVIEYDSKEWKRNEI |
Ga0209992_1000491418 | 3300024344 | Deep Subsurface | MANDSDLIQELRTIVERLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNEI |
Ga0208157_100065811 | 3300025086 | Marine | MSNGDLIAELLVITAELGGKMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK |
Ga0208157_11101651 | 3300025086 | Marine | MSNGDLIAELLVITAELGGSMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLKXVNN |
Ga0208159_10050163 | 3300025101 | Marine | MSNGDLIAELLVITAELGGRMERTEVYDSTGRQYKKIVIEYDVKEWERNHKANLK |
Ga0208158_10020284 | 3300025110 | Marine | MTNKINEGDLIAELLTITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Ga0208158_10130035 | 3300025110 | Marine | MSRQDEGDLIAELLCITGELGGKMRRLDCYESTGRRYKKIVIEYDSTEYKRDEV |
Ga0209232_10368981 | 3300025132 | Marine | MNEGDLIAELSKITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEW |
Ga0208261_10559621 | 3300026076 | Marine | MVNDSDLIEELRTIAEGLGGTMDRIDGYKSEGRQYKKIVIEYDSREWKRNEI |
Ga0208815_10013646 | 3300026134 | Marine Oceanic | MHDDEGTLISELLTITALLGGKMERTEVYESKGRQYKKIVIEYDSHEWVRNEI |
Ga0208815_10116732 | 3300026134 | Marine Oceanic | MNEGDLIAELLEITAELGGTMERIDGYKSEGRQYKKIVIEYDSKEWIRNEI |
Ga0208277_10252721 | 3300026292 | Marine | MNEGNLVAELESITDQLGGKLERITGYRSDGRQYKKIV |
Ga0208277_11072733 | 3300026292 | Marine | MSNGDLIAELLVITAELGGRMERRDVYDSTGRQYKKIVIKYDEKEWERND |
Ga0208277_11257852 | 3300026292 | Marine | MENDSDLIEELRTIAERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI |
Ga0208277_12025241 | 3300026292 | Marine | NEGDLIAELLCITGELGGTMERIDGYKSEGRQYKKIVIEYDSQEWVRNEI |
Ga0208764_101350844 | 3300026321 | Marine | IKMTFNDGDLIAELLTITAEMGGKMERRDVYESTGRQYKKIVIEYDSKEWKRNDKL |
Ga0208941_10069505 | 3300027077 | Marine | MSNGDLIAELLVITAELGGKMERTEVYESKGRQYKKIVIEYDVEEWERNH |
Ga0209359_100550406 | 3300027830 | Marine | VLYCKKRGSMVNDSDLIEELRTIAEGLGGTMERIDGYKSEGRQYKKIVIEYDSREWKRNE |
Ga0209404_100031322 | 3300027906 | Marine | MNEGNLVSELESITDQLGGKLERITGYRSDGRQYKKIVIEYDSKEWKRNEI |
Ga0209404_100913566 | 3300027906 | Marine | MRNQMNDGDLIAELLTITAELGGKMERREVYESTGRQYKKIVIEYDSQEWKRNEI |
Ga0209404_101956982 | 3300027906 | Marine | MHDDEGTLISEMLTLTDLLGGRMERTEVYESKGRQYKKIVIEYDSKEWKRNEV |
Ga0209404_107036583 | 3300027906 | Marine | LSSIEHVATLLRSKMNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV |
Ga0183757_10049826 | 3300029787 | Marine | MNEGDLIAELLQITAELGGTMERVDGYKSEGRQYKKIVIEYDSKEWKRNEI |
Ga0315331_106765061 | 3300031774 | Seawater | NDSDLIEELRTITERLGGTMERIDGYKSEGRQYKKIVIEYDSQEWIRNEI |
Ga0315326_105116713 | 3300031775 | Seawater | MNEGDLIAELRTIAERLGGTMERIDGYKSEGSQYKKIVIEYDSKEWKRNEV |
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