NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F096013

Metagenome Family F096013

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096013
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 67 residues
Representative Sequence SDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADGSGFDVVLEVSEMVWEGLA
Number of Associated Samples 81
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(30.476 % of family members)
Environment Ontology (ENVO) Unclassified
(37.143 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.952 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.20%    β-sheet: 29.89%    Coil/Unstructured: 60.92%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00174Oxidored_molyb 11.43
PF03795YCII 5.71
PF10282Lactonase 5.71
PF13302Acetyltransf_3 3.81
PF04542Sigma70_r2 2.86
PF08281Sigma70_r4_2 1.90
PF11578DUF3237 1.90
PF00999Na_H_Exchanger 1.90
PF12697Abhydrolase_6 1.90
PF07366SnoaL 1.90
PF13424TPR_12 0.95
PF12840HTH_20 0.95
PF01625PMSR 0.95
PF08241Methyltransf_11 0.95
PF01266DAO 0.95
PF10604Polyketide_cyc2 0.95
PF00723Glyco_hydro_15 0.95
PF13419HAD_2 0.95
PF13490zf-HC2 0.95
PF16701Ad_Cy_reg 0.95
PF07885Ion_trans_2 0.95
PF03412Peptidase_C39 0.95
PF03640Lipoprotein_15 0.95
PF01361Tautomerase 0.95
PF00970FAD_binding_6 0.95
PF04229GrpB 0.95
PF13565HTH_32 0.95
PF03480DctP 0.95
PF00491Arginase 0.95
PF13489Methyltransf_23 0.95
PF06224HTH_42 0.95
PF00582Usp 0.95
PF02627CMD 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG3915Uncharacterized conserved proteinFunction unknown [S] 11.43
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 11.43
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 5.71
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 2.86
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 2.86
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 2.86
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.86
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.90
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.90
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.90
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.90
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.90
COG2320GrpB domain, predicted nucleotidyltransferase, UPF0157 familyGeneral function prediction only [R] 0.95
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.95
COG1942Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.95
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.95
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.95
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.95
COG4315Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)Function unknown [S] 0.95
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.95
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 0.95


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil30.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.90%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.95%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.95%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.95%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.95%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.95%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.95%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015189Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_050751013300000033SoilHWEGLAAMTPSGMRALLGTIQHVADDDRYTWLNDQVCAVEGEVRPRADGAGFDVILDVSLMVWEPVSA*
JGI10216J12902_10137518823300000956SoilLFHWEGLAAMTPSGMRQLLGMVQHVTDDERYAWLNERVCTLEGEVRPRDEGDGFNVVLRVQLMTWEPVTDQREQPANVAGS*
JGI10216J12902_10633476513300000956SoilLLGAMHHTSDDERYRWLNDRVCTVEGEVRPRPEGTGFDVVLDVSLMTWEPISDAASASLTPTGR*
JGI10216J12902_11087779113300000956SoilGASILFHWEGLATLTETGMRQLIGLLQHMTEDQRYAWLNDRACAVEGEVRPRDGASGFDVVLDVSLITWDQIRDRSEHAANESGS*
F14TB_10976116623300001431SoilHDGASILFHWEGLASLTDTWMRQLLGSMQHLSDDDRYRWLNDRVCAVEGAVRPRGVGSGVDVVLDVSLMTWEPISAT*
Ga0063454_10174070813300004081SoilLTDSGMRRLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTDESGFDVVYEVSEMVWEGVA
Ga0062593_10345358013300004114SoilLATMTPSGMRQLLGMVQHVTDDERYLWLNDRVCALEGEVRPRDEGDGFNVVLRVHMMTWEPITDHA*
Ga0062589_10147051313300004156SoilFHWEGLAAMTPSGMRTLLGTIQHVADDDRYVWLNDKVCAVEGEVRPRAEGDGFDVVLNVSLMTWEPVTGRA*
Ga0062592_10152554913300004480SoilEGLAAMTPSGMRALLGTIQHVTDDDRYAWLNDRVCAVEGEVRPRADGAGFDVILDVRLMVWEPVSA*
Ga0062591_10136869923300004643SoilATILFHWDGLAAMTASGMRALLGTIQHVTDDERYVWLNDRVCALEGEVRPRGEGDGFDVVLDVSLMTWEPIRDVA*
Ga0066676_1065112213300005186SoilDGATILFHWEGLATVNESGIHQLLGMAQHTSDDERYRWLNDRVCAVEGEVRPRSDDSGFDVVLQVSDMVWEAVSA*
Ga0068868_10089559013300005338Miscanthus RhizosphereTILFQWDGLATMTPSGMRQLLGMIQHVTDDDRYAWLNDRVCALEGEVRPRAEGDGFNVVLRVHMMTWEPITDPCEQPANLAGS*
Ga0070688_10108241613300005365Switchgrass RhizosphereSGMRQLLGTVQHVSDDDRYEWLNDRVCAVEGEVRPRAHGDGFDVILDVSLMVWEPVGVA*
Ga0070667_10180907523300005367Switchgrass RhizosphereWDGLATMTPSGMRQLLGTIQHVTDDDRYTWLNDRVCALEGEVRPRAEGDGFNVVLRVHLMTWEPITDPREQPANIA*
Ga0070699_10117724723300005518Corn, Switchgrass And Miscanthus RhizosphereTDDGAAILFHWEGLARLTDSGMRQLLGTVQHVSDDARYEWLNDRVCAVEGEVRPRAQGDGFDVLLDVSLMVWEPVGVA*
Ga0070704_10015191813300005549Corn, Switchgrass And Miscanthus RhizosphereHWEGLARLTDSGMRQLLGTVQHVSDDDRYEWLNDRVCAVEGEVRPRAHGDGFDVILDVSLMVWEPVGVA*
Ga0066692_1064775113300005555SoilARLTDSGMRQLLGMAQHTSDDERYRWLNDRVYAVEGEVRPRSSGSGFDVVLEVSEMVWEVVSA*
Ga0066704_1068319633300005557SoilTILFHWEGLARLTDSGMRQLLGMAQHTSDDERYRWLNDRVYAVEGEVRPRSSGSGFDVVLEVSEMVWEAVSA*
Ga0058697_1027855923300005562AgaveAILFEWQGLAVLGDSGMRQLLGSLLHTTDDPRYRWLNDRVCAVEGEVRPRADGSGFDVELEVSEMVWEGLA*
Ga0066903_10536465223300005764Tropical Forest SoilSGMRQLVGIMQHVSDDERYRWLNDRVCAVEGEVRPRDGEAGFDVVLDVSLMTWEPVRREPAHA*
Ga0081538_1003311513300005981Tabebuia Heterophylla RhizosphereLFGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTDGSGFDVVLEVSEMVWEGLA*
Ga0066652_10038030523300006046SoilATVLFHWEGLAAMTPSGMRALLGTVQHVTDDARYVWLNDRVCALEGEVRPRARGDGFDVVLQISLMTWEPVTDPREQPAIGVGS*
Ga0075432_1032640713300006058Populus RhizosphereGLARLTPSGMRQLLGAMFHVSDDERYRWLNDRVCAVEGEVRPRPDDGFDVVLDVSLMSAS
Ga0082029_165903713300006169Termite NestLLGSLVHTTGDPRYRWLNDSVCAVEGEVRPRADGPGSEVVFEVSEMVWKGAPQG*
Ga0075431_10191494623300006847Populus RhizosphereLGSLVHTTDDPRYRWLNNRVCAVEGEVRPRTDGSGFDVVLEVSEMVWEGLA*
Ga0075425_10005612453300006854Populus RhizosphereASLTETGMRQLVGMMQHLTDDDRYLWLNDRACAVEGEVRPRDGGSSFDVVLDVSMITWEPLTVAEA*
Ga0079215_1034216323300006894Agricultural SoilGSLVHTTDAPRYRWLNDRVCAVEGEVRPRTDGSGFDVVLEVSEMVWEGLA*
Ga0079216_1177659623300006918Agricultural SoilGMRRLLGSLVHTTDDPRYRWLNDRVCAVEGEVHPRTDGSGFDVVLEVSEMVWEVLA*
Ga0075435_10061792923300007076Populus RhizosphereVIGLMQHVTDDDPYVWLNDRACAIDGEVRPRDCGSGFDVSLDVSMITWEPLVACA*
Ga0111539_1238306923300009094Populus RhizosphereLFEWQGLAVRTDSGMRQLLGSLVHTTGDPRYRWLNDRVCAVEGEVRPRTDGSGFEVVFEVSEMVWEGLA*
Ga0105245_1250539423300009098Miscanthus RhizosphereTDDGAAILFHWEGLARLTGSGMRQLLGTVQHVSDDERYEWLNDRVCAVEGEVRPRAHGDGFDVLLDVSMMVWEPVGVA*
Ga0105243_1066474433300009148Miscanthus RhizosphereLARLTGSGMRQLLGTVQHVSDDDRYEWLNDRVCTVEGEVRPRAHGDGFDVLLDVSMMVWEPVGVA*
Ga0075423_1126749413300009162Populus RhizosphereRALLGTIQHVADDDRYTWLNDQVGAVEGEVRPRADGAGFDVILNVSLMVWEPVSA*
Ga0126307_1018488433300009789Serpentine SoilGMRRLLGSLVHTTDAPRYRWLNERVCAVEGEARPRTDGSGFEVVLEGSEMVWEGVTRAKSVSG*
Ga0126307_1085837213300009789Serpentine SoilSDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADGSGFDVVLEVSEMVWEGLA*
Ga0126313_1141459413300009840Serpentine SoilVLTDSGMRQLLGSLLHTKDDPRYRWLNDRVCAVEGEVRPRTDGSGSHVVYEVSEMVWEGIA*
Ga0126305_1006610043300010036Serpentine SoilTDSGMRRLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTDGSGFQVMFEVSEMVWEGVA*
Ga0126305_1047967223300010036Serpentine SoilAAILFEWQGLAVLTDSVMRPLLGSLVHTTDDPRYCWLNDRVCAVEGEVRPRTDGSGSEVVLEVSEMVWEGV*
Ga0126304_1075980623300010037Serpentine SoilVLTDSGMRRLLGSLVHTTDDPRYRWLNDRLCAVEGEVRPRSDGSGSDVVFEVSEMVWEGVALARSVSA*
Ga0126304_1087945313300010037Serpentine SoilILFEWQGLAVLSDTGMRRLLGSLVHTTDDPRYRWLNDRVCTVEGEVRPRTEGSGFEVVLEVSEMVWEGVARARAGV*
Ga0126315_1109721713300010038Serpentine SoilWQGLAVLGDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRVDGSGFDVVLEVSEMVWEGLA*
Ga0126309_1007427043300010039Serpentine SoilILFEWQGLAVLSDSGMRQLLGSLLHTTDNPRYRGLNDRVCAVEGEVCPRTDGTGFDVVLEVSEMVWEGVA*
Ga0126308_1005225413300010040Serpentine SoilTDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADRSGSEVVFEVSEMVWEGAPQG*
Ga0126308_1053040323300010040Serpentine SoilMRQLLGSLMHTTDDPRYRWLNDRVCAVEGEVRPRGDGSGFDVVLEVSEMVWEGLA*
Ga0126308_1063436733300010040Serpentine SoilAVILFEWQGLAVLSDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADGSGFDVVFEVSEMVWEGLA*
Ga0126308_1068486713300010040Serpentine SoilILFEWQGLAVLTDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRSDGPGSEVVFEVSEMVWERVA*
Ga0126308_1105742323300010040Serpentine SoilQGLAVLGDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTHGSGFDVVLEVSEMVWEGLA*
Ga0126308_1137177223300010040Serpentine SoilLTDPGMLRLLGSLLHTTDDPRYRWLNDRVCAVEGEVRPRTDGSGSEVVLEVSEMVWEGVS
Ga0126312_1009747943300010041Serpentine SoilVLETDGGAAVLFEWQGLAEPNETGRRRLLGSLVHMTDDTRYRWLNDRVCAIEGEVRPRTDGSGSEVVFEVSEMVWEGVP*
Ga0126312_1022135543300010041Serpentine SoilSGMRQLLGSLVHTTSDPRYRWLNDRVCAVEGEVRPRSDGSGFDVVLEVSEMVWEGVA*
Ga0126312_1054371233300010041Serpentine SoilAVLDSSGMRRLLGSLVHTADAPRYRWLNDRVCAVEGEVRPRTDGSGFEVVFEVSEMVWEGVT*
Ga0126312_1098529313300010041Serpentine SoilVLETDDGGAILFEWQGLAVLTDSGMRRLLGSLVHTTDDPRYRWLNDRLCAVEGEVRPRAEGSGFKVVYEVSEMVWEGLA*
Ga0126314_1010348943300010042Serpentine SoilDGGVILFEWQGLAVLTDSGMRRLLGSLVHTTDVPRYRWLNDRVCALEGEVRPRTDGSGFEVVYEVSEMVWEKLG*
Ga0126314_1014966413300010042Serpentine SoilRRLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTAGTGFDVVLEVSEMVWEGVA*
Ga0126314_1015623223300010042Serpentine SoilVLETDDGGAILFEWQGLAVPTDSGMRRLLGSLVHTTDAPRYRWLNDRVCTVEGELRPRTDGSGFDVVIEVSEMVWEGLA*
Ga0126314_1147199723300010042Serpentine SoilDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTDGSGFDVVLEVSEMVWEGLG*
Ga0126310_1155825913300010044Serpentine SoilTILFEWQGLAVKTDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADRSGSEVVFEVSEMVWEGAPQG*
Ga0126310_1170228923300010044Serpentine SoilLETDDGGAILFEWQGLGVLTDSGMRKLLGSLVHTTDDTRFRWLNDLVCAVEGEVRPRTDGPGFEVVLEVSEMVWKGVG*
Ga0126311_1056245123300010045Serpentine SoilAVRTDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPGSDGPGYEVVFEVSEMVWKGVPLG*
Ga0126311_1064097513300010045Serpentine SoilILFEWQGLAVLSDSGMRQLLGSLVHTTSDPRYRWLNDRVCAVEGEVRSRADGPGYEVVFEVSEMVWEGLA*
Ga0126311_1170763913300010045Serpentine SoilTDDGGAILFEWQGLAVLGDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTNGSGFDVVLEVSEMVWEGLA*
Ga0126306_1010741113300010166Serpentine SoilMRRLLGSLVHTTDDPRYCWLNDRVCAVEGEVRPRSDGSGFDVVFEVSEMVWEGVA*
Ga0126306_1027553613300010166Serpentine SoilLLGSLVHTTDAPRYRWLNERVCAVEGEVRPRADGSGFDVVFEVSEMVWEGLA*
Ga0126306_1050223813300010166Serpentine SoilILFEWQGLAVLSDSGMRGLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRTDGSGFEVVLEVSEMVWEGVARGARSVSG*
Ga0126306_1052919513300010166Serpentine SoilGAILFEWQGLAVLGDSGMRQLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADRTGFDVVLEVSEMVWEGVA*
Ga0137378_1144773823300012210Vadose Zone SoilLSQLLGMAQHTSDDERYRWLNDRVYAVEGEVRPRSDDTGFDVLLVVSEMVWETVST*
Ga0150985_10786183123300012212Avena Fatua RhizosphereHGLVVRGEVGTLRLLGSLVHITDHPPYRWLNDRVCAVEGEVRRRADGSGSEVVFEVSDMVWEGVP*
Ga0150984_12050058313300012469Avena Fatua RhizosphereMRRLLGSLVHTTDAPRYRWLNDRVCAVEGEVHPRTDGYGFDVVFEVSEMVWEGVTRARSVSG*
Ga0157300_105206323300012884SoilRTVLGTIQHVADDDRYVWLNDRVCAVEGEVRPRGEGDGFDVVLNVSLMTWEPVTGRA*
Ga0157283_1033755613300012907SoilDGATILFHWEGLAAMTPSGMRALLGTVQHVTDDERYAWLNDRVCTVEGEVRPRETGDGFDVVLRVCLMTWEPVTGEREHAADIAGS*
Ga0164299_1093747613300012958SoilDGATILFQWDGLATMTPSGMRQLLGMIQHVTDDDRYAWLNDRVCALEGEVRPRAQGDGFNVVLRVHMMTWEPITDPREQPGTSPDLDRIP*
Ga0164309_1021571433300012984SoilLFHWEGLAAMTRSGMRALLGTIQHVADDDRYAWLNDQVCAVEGEVRPRAHGFGFDVILDVSLMVWEPVSA*
Ga0164304_1040402913300012986SoilLATMTPSGMRQLLGMVQHVTDDERYVWLNDRVCALEGEVRPRDEGDGFNVVLRVHMMTWEPITNRA*
Ga0075351_104715223300014318Natural And Restored WetlandsMRRLLGSITHTTSDERYRWLNDRVGAVEGEVRPRDGGGFDVVFDVAEMIWEPIG*
Ga0075352_113555323300014324Natural And Restored WetlandsTPSGMRAIVGTVEHVTDDERYRWLNDRLCAVEGEVRPRSDGRGFDVVLDIAAMRWEGTATVRSA*
Ga0182001_1018243423300014488SoilSGMRRLLGSLVHTTDDPRYRWLNDSVCAVEGEVRPRADGSGSDVVLEVSEMVWEGLA*
Ga0173483_1001749953300015077SoilRRLVGMIQHVSDDERYRWLNDRVCAVEGEVRPRSDGSGFDVVLEVSEMVWEPVSG*
Ga0167667_1000811113300015189Glacier Forefield SoilMRELVGGITHVTDDPRYSWLNNAYCALVGEVLPRSNGGGFDVVLEVSEVIWEPTP*
Ga0132258_1259762523300015371Arabidopsis RhizosphereLATMTPSGMRQLLGMVQHVTDDERYVWLNDRVCALEGEVRPRDEGDGFNVVLRVHMMSWEPITDRA*
Ga0132257_10092850113300015373Arabidopsis RhizosphereAILCEWQGLALPSDSGRRRLLGSLVHTTDHPRYRWLNDRVCAVEGEVHPRAAGTGSEVVFEVSEMVWEGVPSASSHRSLAE*
Ga0132255_10498001823300015374Arabidopsis RhizosphereASMTPSGMRRLLGMIQHVTDDDRYAWLNDQACAIEGEVRPRAAGDGFDVVLDVSLMVWEPIRDRRESVGHEGGS*
Ga0134083_1059160613300017659Grasslands SoilGMRQLLGMAQHTSDDDQYRWLNDRVCAVEGEVRPRSSGSGFDVVLEVSEMVWEAVSV
Ga0190269_1153023323300018465SoilEWQGLAVLTDSGMRRLLGSLVHTTDDPRYRWLNDRVCAVEGEVRPRADGSGFDVVFEVSEMVWEGLA
Ga0190268_1060218113300018466SoilGMRQLLGSLVHTTDDPRYRWLNDPVCAVEGEVRPRTPGSGFGVVLEVSEMVWEGLA
Ga0190268_1096823713300018466SoilMRRLLGSLVHTTDDVRYRWLNDRVCAVEGEVRPRADGAGFDVVFEVSEMIWERVA
Ga0190268_1125229413300018466SoilLSDSGMRQLLGSLVHTTDAPRYRWLNDRVCAVEGEVRPRADGSGFDVVLEVSEMVWEELA
Ga0190274_1069376413300018476SoilAAILFEWQGLAIRSDSGTRRLLGSLVHTTDHPHYRWLNDRVCAVEGEVRPRTDASGSEVVFEVSEMVWERVP
Ga0173481_1044160823300019356SoilRTVLGTIQHVADDDRYVWLNDRVCAVEGEVRPRGEGDGFDVVLNVSLMTWEPVTGRA
Ga0190264_1053919713300019377SoilDDGGAILFEWQGLAVLSDSGMRQLLGSLVHTTDAPRYRWLNDRVCAVEGEVRPRADGSGFDVVLEVSEMVWEELA
Ga0196959_1014282413300021184SoilGLGVLTDSGLRRLLGSLVHTTDDPRYRWLNERVYAVEGEVRPRTDGPGHEVVFEVSEMVWEGVARGARSNSG
Ga0213882_1021455623300021362Exposed RockTEDGATIPFEWQGLVVLTDSGMRRLLGSLVHTTDDPRYRELNDRACAVEGEVRPRTEGSGFEVVFEVSQMVWEGVACTSE
Ga0207663_1043640723300025916Corn, Switchgrass And Miscanthus RhizosphereILFQWEGLATMTPSGMRQLLGMVQHVTDDERYVWLNDRVCALEGEVRPHDEGDGFNVVLRVHMMTWEPITDRA
Ga0207662_1075478913300025918Switchgrass RhizosphereILFHWEGLAAMTPSGMRALLGTIQHVADDDRYAWLNDQVCAVEGEVRPRADGFDVILDVSLMVWEPVSA
Ga0207706_1066038823300025933Corn RhizosphereMTPSGMRALLGTIQHVADDDRYTWLNDQVCAVEGEVRPRTDGAGFDVILDVSLMVWEPVS
Ga0207669_1026280133300025937Miscanthus RhizosphereFHWEGLAAMTPSGMRALLGTIQHVADDDRYAWLNDQVCAVEGEVRPRADGAGFDVILDVSLMVWEPVSA
Ga0209152_1029151523300026325SoilHWEGVARMTETGMRRLLGMAQHTSNDERYRWLNDRVCAVEGEVRPRSDGSGFDVVLEVSEMVWEAVSA
Ga0268265_1204717813300028380Switchgrass RhizosphereGLATMTPSGMRQLLGMVQHLTDDDRYTWLNDRVCALEGEVRPRAEGDGFNVVLRVHMMTWEPITDPREQPANVAGS
Ga0307307_1000155133300028718SoilMTASGMRALLGSIQHVTDDDRYAWLNDRVCAVEGEVRPRADGAGFDVVLEVSEMVWEAVS
Ga0307315_1024365913300028721SoilFEWQGLAVLTDSGMRRLLGSLVHTTADPRYRWLNDRVCAVEGEVRPATDASGSEVVYEVLEMVWEGVS
Ga0307297_1006385013300028754SoilRRLLGSLVHTTADPRYRWLNDRVCAVEGEVRPATDASGSEVVYEVLEMVWEGVS
Ga0307292_1026429533300028811SoilAAILFHWEGLAAMKPSGMRALLGTIQHVADDDRYTWLNDQVCAVEGEVRPRADGAGFDVILDVSLMVWEPVSA
Ga0307405_1000967493300031731RhizosphereQGLAVRGDGGRLRLLGSLVHITDHAHYRWLNDHVCAVEGEVSRRAHGSGSEVVFEVSDMVWEGVS
Ga0307413_1084064333300031824RhizosphereILFEWQGLAVLTDSGMRKLLGSLVHTTEDSRYRWLNDRFCAVKGEVRPRTDGSGFDVVLEVSEMVWEGVG
Ga0308176_1030097423300031996SoilAAILFRWEGLAVMTPSGMRQLLGMVQHVTDDERYAWLNDRVCALEGEVRPRAEGDGFNVVLRVQLMTWEPLTDASEQLANVGGS
Ga0307416_10066295513300032002RhizosphereQGLAVLTDSGMRKLLGSLVHTTEDSRYRWLNERFCAVEGEVCPRTDGSGFDVVLEVSEMVWEGVG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.