Metagenome / Metatranscriptome Family F096003

Basic Information
Family ID	F096003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	48 residues
Representative Sequence	MPGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYNA
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.14 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	84.76 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (84.762 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.476 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.05% β-sheet: 0.00% Coil/Unstructured: 51.95%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07690	MFS_1	6.67
PF00158	Sigma54_activat	6.67
PF00083	Sugar_tr	5.71
PF00440	TetR_N	2.86
PF11737	DUF3300	2.86
PF12146	Hydrolase_4	2.86
PF13432	TPR_16	1.90
PF16363	GDP_Man_Dehyd	1.90
PF02954	HTH_8	1.90
PF14559	TPR_19	0.95
PF01566	Nramp	0.95
PF03547	Mem_trans	0.95
PF12704	MacB_PCD	0.95
PF02738	MoCoBD_1	0.95
PF04362	Iron_traffic	0.95
PF12833	HTH_18	0.95
PF13411	MerR_1	0.95
PF00710	Asparaginase	0.95
PF00561	Abhydrolase_1	0.95
PF13701	DDE_Tnp_1_4	0.95
PF13620	CarboxypepD_reg	0.95
PF00080	Sod_Cu	0.95
PF00375	SDF	0.95
PF13183	Fer4_8	0.95
PF02732	ERCC4	0.95
PF00501	AMP-binding	0.95
PF04307	YdjM	0.95
PF00072	Response_reg	0.95
PF03401	TctC	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.90
COG2924	Fe-S cluster biosynthesis and repair protein YggX	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	0.95
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.95
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.95
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.95
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.95
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.76 %
Unclassified	root	N/A	13.33 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.57 %
Unclassified	root	N/A	13.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.62 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	37.14 %
Unclassified	root	N/A	13.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.95 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.90 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.95 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.90 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Endopterygota	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Coleoptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Polyphaga	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Elateriformia	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Elateroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Lampyridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Luciolinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Abscondita	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	37.14 %
Unclassified	root	N/A	13.33 %
Abscondita terminalis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1.90 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.95 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10032246	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300005332\|Ga0066388_101513156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300005332\|Ga0066388_106104160	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005576\|Ga0066708_10731304	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005713\|Ga0066905_102072604	Not Available	529	Open in IMG/M
3300005993\|Ga0080027_10226240	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300006028\|Ga0070717_12098381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006050\|Ga0075028_100030633	All Organisms → cellular organisms → Bacteria → Proteobacteria	2465	Open in IMG/M
3300006050\|Ga0075028_100695962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300006172\|Ga0075018_10189490	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300006172\|Ga0075018_10581328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006176\|Ga0070765_100380824	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300006354\|Ga0075021_10006068	All Organisms → cellular organisms → Bacteria → Proteobacteria	6393	Open in IMG/M
3300006794\|Ga0066658_10666673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	571	Open in IMG/M
3300009088\|Ga0099830_11728158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300009523\|Ga0116221_1405599	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300009665\|Ga0116135_1103730	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010358\|Ga0126370_10788630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300010361\|Ga0126378_10114666	All Organisms → cellular organisms → Bacteria → Proteobacteria	2687	Open in IMG/M
3300010371\|Ga0134125_11843103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300010396\|Ga0134126_10085958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3884	Open in IMG/M
3300012202\|Ga0137363_11197939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300012205\|Ga0137362_11017291	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012349\|Ga0137387_11321833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012360\|Ga0137375_10456138	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012362\|Ga0137361_11009927	Not Available	751	Open in IMG/M
3300012683\|Ga0137398_10753750	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012918\|Ga0137396_10744162	Not Available	722	Open in IMG/M
3300012922\|Ga0137394_11254861	Not Available	604	Open in IMG/M
3300012927\|Ga0137416_11679187	Not Available	579	Open in IMG/M
3300013307\|Ga0157372_11276189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300014169\|Ga0181531_11072127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300014199\|Ga0181535_10660153	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300014200\|Ga0181526_10590104	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300014495\|Ga0182015_10515144	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	763	Open in IMG/M
3300014501\|Ga0182024_10326940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2014	Open in IMG/M
3300014657\|Ga0181522_10254778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300015259\|Ga0180085_1112841	Not Available	805	Open in IMG/M
3300017942\|Ga0187808_10175804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300017943\|Ga0187819_10029042	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300017943\|Ga0187819_10846306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017948\|Ga0187847_10204971	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300017966\|Ga0187776_10482870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300017972\|Ga0187781_11225751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300017972\|Ga0187781_11318917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018006\|Ga0187804_10097800	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300018022\|Ga0187864_10474570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300018034\|Ga0187863_10433482	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	734	Open in IMG/M
3300018038\|Ga0187855_10034187	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300018044\|Ga0187890_10304287	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300018086\|Ga0187769_10202770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1468	Open in IMG/M
3300019888\|Ga0193751_1002118	All Organisms → cellular organisms → Bacteria	12225	Open in IMG/M
3300020580\|Ga0210403_11150167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300020581\|Ga0210399_10073434	All Organisms → cellular organisms → Bacteria → Acidobacteria	2771	Open in IMG/M
3300020582\|Ga0210395_11120360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300020582\|Ga0210395_11183525	Not Available	562	Open in IMG/M
3300020583\|Ga0210401_11167763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300021170\|Ga0210400_10113479	All Organisms → cellular organisms → Bacteria → Acidobacteria	2156	Open in IMG/M
3300021171\|Ga0210405_10441429	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300021171\|Ga0210405_10823415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300021178\|Ga0210408_11002896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300021401\|Ga0210393_10365649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300021420\|Ga0210394_10879299	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300021432\|Ga0210384_11181443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300021432\|Ga0210384_11190753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300021433\|Ga0210391_10256629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300021474\|Ga0210390_10445990	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300021474\|Ga0210390_11304538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300021475\|Ga0210392_11518026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021477\|Ga0210398_10349791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300021559\|Ga0210409_10367828	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300022557\|Ga0212123_10074962	All Organisms → cellular organisms → Bacteria → Acidobacteria	2892	Open in IMG/M
3300024330\|Ga0137417_1120275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300025912\|Ga0207707_11656916	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300026304\|Ga0209240_1137752	Not Available	794	Open in IMG/M
3300026325\|Ga0209152_10106858	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300026359\|Ga0257163_1034581	Not Available	797	Open in IMG/M
3300026532\|Ga0209160_1113289	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300026880\|Ga0209623_1001883	Not Available	1091	Open in IMG/M
3300027432\|Ga0209421_1119679	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300027512\|Ga0209179_1051457	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300027651\|Ga0209217_1069610	Not Available	1035	Open in IMG/M
3300027651\|Ga0209217_1088203	Not Available	895	Open in IMG/M
3300027660\|Ga0209736_1137185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300027660\|Ga0209736_1207819	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027867\|Ga0209167_10342292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300027875\|Ga0209283_10372708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300027894\|Ga0209068_10005043	All Organisms → cellular organisms → Bacteria	6236	Open in IMG/M
3300027894\|Ga0209068_10022037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3109	Open in IMG/M
3300028906\|Ga0308309_10190465	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300029817\|Ga0247275_1100138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300030991\|Ga0073994_12412300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300031231\|Ga0170824_111720976	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300031474\|Ga0170818_112396334	Not Available	1338	Open in IMG/M
3300031708\|Ga0310686_105961461	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300031708\|Ga0310686_107691144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300031718\|Ga0307474_11059590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300031720\|Ga0307469_10048454	All Organisms → cellular organisms → Bacteria → Acidobacteria	2648	Open in IMG/M
3300031720\|Ga0307469_12130732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031740\|Ga0307468_100476602	Not Available	981	Open in IMG/M
3300031754\|Ga0307475_10094223	All Organisms → cellular organisms → Bacteria → Acidobacteria	2327	Open in IMG/M
3300032180\|Ga0307471_101993791	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300032805\|Ga0335078_12062024	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300032955\|Ga0335076_10870458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300033134\|Ga0335073_10648777	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.14%
Aquatic	Environmental → Aquatic	21.90%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.14%
Freshwater	Environmental → Aquatic → Freshwater	13.33%
Sediment	Environmental → Aquatic → Sediment	7.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.95%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.95%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.95%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_100322461	3300002917	Grasslands Soil	MPQFLSNLLRSLRGPGGTDMRLLCRQLLSQRGEASQTALAQRIIAEYK
Ga0066388_1015131561	3300005332	Tropical Forest Soil	MTQFIATLLRSLSGTRGTDMRSLCHQLLSQRGEVSQTVLAGRILQQYK
Ga0066388_1061041602	3300005332	Tropical Forest Soil	MPQFFANFLRNLRGARGTDMRLLCQQLLSQRGEASQTVLARRIIEQ
Ga0066708_107313041	3300005576	Soil	MLRERRGTDMGFLCHHLLSERGEASQTVLAQEIIKAY
Ga0066905_1020726042	3300005713	Tropical Forest Soil	MPEFLTNLLRSLRGARGADMRLLCRQLLSQRGEASQTVLAQRIIE
Ga0080027_102262401	3300005993	Prmafrost Soil	MPGFLTSLLQSLRDRRGTDMRYLCRHLLSERGEASQTALAQEIINTYRK
Ga0070717_120983811	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPGFLDKLLRVLRERRGTDMPFMCRHLLSERGEASQTALAQEIINAYRAMNDTQRL
Ga0075028_1000306335	3300006050	Watersheds	MPTLIANLFRMLREPRGTDMRFLCIRLLSERGEASQTVLAQEIIN
Ga0075028_1006959621	3300006050	Watersheds	MPRLITNLLRVLRERRGTDMRFLCLRLLSERGEAS
Ga0075018_101894902	3300006172	Watersheds	MPGFLSKLLRVLRERRGTDMSFICRHLLSERGEASQTALAQ
Ga0075018_105813281	3300006172	Watersheds	MPTLIANLFRMLREPRGTDMRFLCIRLLSERGEASQTVLAQEIINIY
Ga0070765_1003808241	3300006176	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYGAMNSGERRH
Ga0075021_100060689	3300006354	Watersheds	MPTLIANLFRMLREPRGTDMRFLCIRLLSERGEASQTVLAQEII
Ga0066658_106666731	3300006794	Soil	MPSFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAY
Ga0099830_117281581	3300009088	Vadose Zone Soil	MPGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYRAMNAAIA
Ga0116221_14055991	3300009523	Peatlands Soil	MPGFLTNLLESLRGRRTDMAFLCRKLLSERGEASQTALAHEIIIGYAAMSPAQRVS
Ga0116135_11037301	3300009665	Peatland	MGFLTNLLQSLRDRRGTDMRFLCRHLLSERGEASQTALAQEIINTYRRMNPGQRLAF
Ga0126370_107886301	3300010358	Tropical Forest Soil	MPEFLTNLLNSLRGARGNDMQLLCTQLLSQRGEASQTVLA
Ga0126378_101146661	3300010361	Tropical Forest Soil	MIVIAMPGFLSNLLQSLHRHRTDMPFLCRRLLSERGEASQTTIAQQ
Ga0134125_118431032	3300010371	Terrestrial Soil	MLMPGFLSNLLQILRERRGSDMLFLCRHLLSERGEASQTVLAERIIKAYMEMS
Ga0134126_100859581	3300010396	Terrestrial Soil	MAGFFSKLLRIIREQRGTNMPFMCHHLLSQRGEASQTALAQEIITSYRAMKPPQRLLFFEMLSRDF
Ga0137363_111979392	3300012202	Vadose Zone Soil	MPGFFQNLLRMLRERRGTDMRFLCRLLLSERGEASQTALAQEIINTYRNMNTAKRRDFFD
Ga0137362_110172911	3300012205	Vadose Zone Soil	MPGFLSNLLRLLRERSGTDMDFLCHHLLSERGEASQTVLAQEIIKAY
Ga0137387_113218332	3300012349	Vadose Zone Soil	MPGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVL
Ga0137375_104561382	3300012360	Vadose Zone Soil	MPQFLDKLLRGMRGPRAADVHLLSRQLLSQRGEASQTVLAQKF
Ga0137361_110099271	3300012362	Vadose Zone Soil	MPQFFSNLLRSLRGPGGTDMRLLCRQLLSQRGEASQTALAQRIIAEYKAM
Ga0137398_107537501	3300012683	Vadose Zone Soil	MPAFLDKLLKILQGRRGKDMRFLCRHLLSQRGEASQTALAQEIINTYAAMDSIQRIRFYKML
Ga0137396_107441621	3300012918	Vadose Zone Soil	MPAFLDKLLKILQGRGKDMRFLCRHLLSQRGEASQTALAQEVINTYAAMDS
Ga0137394_112548611	3300012922	Vadose Zone Soil	MPAFLDKLLKILQGRRGKDMRFLCSHLLSQRGEASQTALAQE
Ga0137416_116791872	3300012927	Vadose Zone Soil	MPAFLDKLLKRLQGRRGKDMRFLCRHLLSQRGEASQTAL
Ga0157372_112761892	3300013307	Corn Rhizosphere	MPRLFSNLLRGLRERRGSDMRFLCRHLLSERGEASQTALAQEIITSYRAMNGNDRTAFFQ
Ga0181531_110721271	3300014169	Bog	MGFLTNLLQSLRDRRGTDMRFLCKHLLSERGEASQTALAQEIITTYRKMNPL
Ga0181535_106601532	3300014199	Bog	MGFLTSLLQSLRERRGTDMRYLCRHLLSERGEASQTALAQEIINTYRKMNAAQRS
Ga0181526_105901041	3300014200	Bog	MGFLTSLLQSLRERRGTDMRYLCRHLLSERGEASQTALAQEII
Ga0182015_105151442	3300014495	Palsa	MGFLTNLLQSLRERRGTDMRFLCRHLLSERGEASQTALAQEIINTY
Ga0182024_103269403	3300014501	Permafrost	MSGFLSNLLRMLRAQRGKDMRFLCRHLLSERGEASQTALAEEIIN
Ga0181522_102547782	3300014657	Bog	MGFLTNLLQSLRDRRGTDMRFLCKHLLSERGEASQTAL
Ga0180085_11128412	3300015259	Soil	MPQFLTSLLRSLRGARGTDMRLLCRQLLSQRGEASQTVIA
Ga0187808_101758041	3300017942	Freshwater Sediment	MPGFLSNLLRVLGEGRGADMRFLCHQLLSERGEASQTVLAEEIIKTYAAMSPGKRRGFF
Ga0187819_100290421	3300017943	Freshwater Sediment	MPGLLGNLLRVLRERRGTDMHFLCRHLLSERGEASQ
Ga0187819_108463062	3300017943	Freshwater Sediment	MPGFLSNLLRVLSEGRGADMRFLCHQLLSERGEAS
Ga0187847_102049712	3300017948	Peatland	MGFLTNLLQSLRDRRGTDMRFLCRHLLSERGEASQTAL
Ga0187776_104828701	3300017966	Tropical Peatland	MPDFFSNLLRLLRGPRGSDVPFLCHKLLSERGEASQTALAQEIINAYQGMSA
Ga0187781_112257511	3300017972	Tropical Peatland	MPGLFANLLQLLQNRRGKDMRFLCRTLLSSRGEASQTVLAQEIICAYRDMNTAQRMD
Ga0187781_113189171	3300017972	Tropical Peatland	MPAFFDNLLRLLRGPRGSDVPFLCHKLLSERGEASQTALAQEIISAYHAMNLEKRL
Ga0187804_100978001	3300018006	Freshwater Sediment	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYGAMNSGERHHFFEM
Ga0187864_104745701	3300018022	Peatland	MPGLLTNLLRVLRERRGTDMRFLCRHLLSERGEASQTALAQEIINTYRAM
Ga0187863_104334822	3300018034	Peatland	MPGFLTSLLQSLRDRRGTDMRYLCRHLLSERGEASQTALAQEIINSYRKMNSAQRIGFFE
Ga0187855_100341871	3300018038	Peatland	MPGFLTNLLQALRERRGTDMRFLCRHLLSERGEASQTALAQEIINTYRKMNPTQRIAF
Ga0187890_103042872	3300018044	Peatland	MGFLTNLLQSLRERRGTDMRFLCRHLLSERGEASQ
Ga0187769_102027702	3300018086	Tropical Peatland	MPDFFSSLLRLLRGPRGSDVPFLCHKLLSEQGEASQTALAQEIISAYQG
Ga0193751_100211810	3300019888	Soil	MPAFLDKLLKILRSRRGKDMSFLCRHLLSQRGEASQTALAQEI
Ga0210403_111501671	3300020580	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTV
Ga0210399_100734341	3300020581	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYAA
Ga0210395_111203601	3300020582	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAY
Ga0210395_111835251	3300020582	Soil	MPGFLSKLLQALRERRGTDVSSLCRQLLSERGEASQTALAQEIINGYRVMKDG
Ga0210401_111677632	3300020583	Soil	LLQALRERRGTDMSFLCRHLLSERGEASQTALAQEIINGY
Ga0210400_101134793	3300021170	Soil	MPGILSKLLRVLRERRSTDMLFMCRHLLSERGEASQTALAQEIITAYNAMTDGRRLQFLEMVS
Ga0210405_104414291	3300021171	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQI
Ga0210405_108234151	3300021171	Soil	MPGFFSNLLRVLRNRRGSDMLFLCRHLLSSRGEASQTALAA
Ga0210408_110028961	3300021178	Soil	MPRFLDKLLRVLRERRGTDMPFMCRHLLSERGEASQTALAQEIINAYR
Ga0210393_103656491	3300021401	Soil	MAPRFLSKLLRVLRERRGTDMSFMCRQLLSERGEASQTALAQEIINAYRAMNDEQRLQFFAMLS
Ga0210394_108792991	3300021420	Soil	MPGFLSKLLRVLRERRGADISFMCRHLLSERGEASQTAL
Ga0210384_111814432	3300021432	Soil	MPGFLSKLLQALRERRGTDMSFLCRHLLSERGEASQTALAQEIINGYRAMND
Ga0210384_111907532	3300021432	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYAAMNSGERRHFFEMLCR
Ga0210391_102566292	3300021433	Soil	MPGFLSKLLRMLQERRGTDMPFICRHLLSERGEASQT
Ga0210390_104459901	3300021474	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYAAMNSGE
Ga0210390_113045382	3300021474	Soil	MPGFISNLLQSLQGRRKDMRFLCHRLLSERGEASQTAIAQQIISAYNSMEP
Ga0210392_115180261	3300021475	Soil	MGFLSNLIRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIRAYGAMNSGER
Ga0210398_103497912	3300021477	Soil	MPRFFASLLRILRDRRGADMQFLCRHLLSSRGEASQTALAQQIIAAVAAMNFN
Ga0210409_103678282	3300021559	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYAAMNSGERRHFFE
Ga0212123_100749623	3300022557	Iron-Sulfur Acid Spring	MPGFFNNLLHVLQGRRGRDMRFMCRHLLSERGEASQTALAQEIINTYTAMDSP
Ga0137417_11202751	3300024330	Vadose Zone Soil	MPGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYTAMNAGERRKFFE
Ga0207707_116569161	3300025912	Corn Rhizosphere	MPEFLTNLLRSLRGARGEDMQLLCRQLLSQRGEASQTVLA
Ga0209240_11377522	3300026304	Grasslands Soil	MPAFLDKLLKILQGRRGKDMRFLCSHLLSQRGEASQTALAQEIINTYAAMDSIQRIRFY
Ga0209152_101068581	3300026325	Soil	MPSFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYHVM
Ga0257163_10345812	3300026359	Soil	MPAFLDKLLKILQGRRGKDMRFLCRHLLSQRGEASQTALAQEIINTYAAMDSVQRIRFYK
Ga0209160_11132891	3300026532	Soil	MPSFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYNAMNSGERRNFFE
Ga0209623_10018832	3300026880	Forest Soil	MPAFLDKLLKILRSRRGKDMSFLCRHLLSQRGEASQ
Ga0209421_11196792	3300027432	Forest Soil	MPGFLTSLLQSLRDRRGTDMRYLCRHLLSERGEAS
Ga0209179_10514571	3300027512	Vadose Zone Soil	MPAFLDKLLKILQGRRGKDMRFLCSHLLSQRGEASQTALAQEIINTYAAMDSIQRIRFYKMLSGEFAPD
Ga0209217_10696102	3300027651	Forest Soil	MPGFLDKLLKILRSRRGKDMSFLCRHLLSQRGEASQ
Ga0209217_10882031	3300027651	Forest Soil	MPAFLDKLLKILQSRRGKDMRFLCRHLLSQRGEASQTALAQEIINSYAAMDSTQRV
Ga0209736_11371851	3300027660	Forest Soil	MPGFLRKLLRVLRERRGTDMSFMCHQLLSQRGEASQTALAQ
Ga0209736_12078191	3300027660	Forest Soil	MPAFLDKLLKILRSARGKDMRFLCRHLLSQRGEASQTALAQEIINTYAAMD
Ga0209167_103422922	3300027867	Surface Soil	MAGFLSKLLESLRGRRSDMRFLCRHLLSERGEASQTALA
Ga0209283_103727082	3300027875	Vadose Zone Soil	MPGFFKNLLRVLQNRRGTDTRFLCRHLLSERGEASQTALAQEIIDTYRAMNAAQRLGFFE
Ga0209068_100050431	3300027894	Watersheds	MPTLIANLFRMLREPRGTDMRFLCIRLLSERGEASQTVLAQE
Ga0209068_100220377	3300027894	Watersheds	MPGFLSKLLRILRERRGTDMRFLCRHLLSERGEASQTALAEEIINTYKSMNSM
Ga0308309_101904652	3300028906	Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQ
Ga0247275_11001382	3300029817	Soil	MPGFLTNLLESLRGRRTDMRFLCRRLLSERGEASQT
Ga0073994_124123001	3300030991	Soil	MPAFLDKLLKILRSRRGKDMSFLCRHLLSQRGEASQTALAQEIITTYTAMDSTQRLKFYEMLCGAFSP
Ga0170824_1117209761	3300031231	Forest Soil	MPDFLDKFLRILRTRRGKDMRFLCKHLLSQRGEASQTALAQEIINSYAAMDSAQKTRFYEMLCDEFS
Ga0170818_1123963341	3300031474	Forest Soil	MPDFLDKFLRILRTRRGKDMRFLCKHLLSQRGEASQTALAQEIINSYAAMDSAQKTRF
Ga0310686_1059614612	3300031708	Soil	MKVQYNLRIMPQFFGNLLRALRERRGTDMSFMCRHLLSERGEASQTALAQEIIVAYKA
Ga0310686_1076911442	3300031708	Soil	MPGFLSNMIQVLRERRGTDMNFLCRHLLSERGEASQTALAEEIITTYQAMS
Ga0307474_110595902	3300031718	Hardwood Forest Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKA
Ga0307469_100484541	3300031720	Hardwood Forest Soil	MPRFLDKLLRVLRERRGTDMSFMCRHLLSERGEASQTALAQ
Ga0307469_121307322	3300031720	Hardwood Forest Soil	MPGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQEIIKAYNA
Ga0307468_1004766022	3300031740	Hardwood Forest Soil	MTQIFSSLLRSLGGPRGADMRTLCHQLLSQRGEASQT
Ga0307475_100942231	3300031754	Hardwood Forest Soil	MGFLSNLLRLLRERRGTDMDFLCHHLLSERGEASQTVLAQQIIKAYAAMNSG
Ga0307471_1019937912	3300032180	Hardwood Forest Soil	MPGFLSKLLRVLRERRGTDMSFICRHLLSERGEASQTALAQEIITAYGA
Ga0335078_120620242	3300032805	Soil	MPGFFSNLLQSLQGRRRDMRFLCNRLLSERGEASQTVIAQEIISA
Ga0335076_108704582	3300032955	Soil	MAMPGFLSNLLRVLSEGRGADMRFLCHQLLSERGEASQTVLAEKIIKTYAA
Ga0335073_106487772	3300033134	Soil	MPGFFSNLVQSLQGRRTDMRFLCHRLLSERGEASQTAIAH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign