Metagenome / Metatranscriptome Family F095981

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095981
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	70 residues
Representative Sequence	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGERLEIQYAERNLHVAERMK
Number of Associated Samples	70
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.62 %
% of genes near scaffold ends (potentially truncated)	24.76 %
% of genes from short scaffolds (< 2000 bps)	74.29 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (31.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.10% β-sheet: 0.00% Coil/Unstructured: 44.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.1.3.1: delta-Endotoxin (insectocide), N-terminal domain	d1w99a1	1w99	0.77682
a.25.1.0: automated matches	d4cyba_	4cyb	0.76872
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.76337
a.47.2.1: t-snare proteins	d1vcsa1	1vcs	0.76128
a.118.8.6: SusD-like	d3cgha1	3cgh	0.7601

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13545	HTH_Crp_2	19.05
PF00072	Response_reg	13.33
PF12732	YtxH	1.90
PF07238	PilZ	1.90
PF00563	EAL	1.90
PF06827	zf-FPG_IleRS	1.90
PF04962	KduI	0.95
PF14361	RsbRD_N	0.95
PF02518	HATPase_c	0.95
PF00069	Pkinase	0.95
PF03030	H_PPase	0.95
PF04952	AstE_AspA	0.95
PF14748	P5CR_dimer	0.95
PF03965	Penicillinase_R	0.95
PF00877	NLPC_P60	0.95
PF00589	Phage_integrase	0.95
PF01740	STAS	0.95
PF11154	DUF2934	0.95
PF02705	K_trans	0.95
PF11645	PDDEXK_5	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.81
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.90
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.90
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.90
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.90
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.95
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.95
COG3717	5-keto 4-deoxyuronate isomerase	Carbohydrate transport and metabolism [G]	0.95
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	2.86 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.86 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.90 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.86 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	1.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.86 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1.90 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10008691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6919	Open in IMG/M
3300000567\|JGI12270J11330_10021690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3952	Open in IMG/M
3300001174\|JGI12679J13547_1001021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M
3300002245\|JGIcombinedJ26739_101120454	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300004082\|Ga0062384_100045381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2092	Open in IMG/M
3300004082\|Ga0062384_100675470	Not Available	708	Open in IMG/M
3300004091\|Ga0062387_100458463	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300004121\|Ga0058882_1006027	Not Available	702	Open in IMG/M
3300004139\|Ga0058897_10700699	Not Available	816	Open in IMG/M
3300004139\|Ga0058897_10889325	Not Available	644	Open in IMG/M
3300004631\|Ga0058899_11407407	Not Available	528	Open in IMG/M
3300004631\|Ga0058899_11621023	Not Available	583	Open in IMG/M
3300004631\|Ga0058899_12198142	Not Available	1876	Open in IMG/M
3300004635\|Ga0062388_100336100	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300005534\|Ga0070735_10214644	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005537\|Ga0070730_10703536	Not Available	640	Open in IMG/M
3300005541\|Ga0070733_10498352	Not Available	814	Open in IMG/M
3300005541\|Ga0070733_10834433	Not Available	619	Open in IMG/M
3300005591\|Ga0070761_10162939	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300005610\|Ga0070763_10334100	Not Available	840	Open in IMG/M
3300005712\|Ga0070764_10624595	Not Available	659	Open in IMG/M
3300005993\|Ga0080027_10013980	All Organisms → cellular organisms → Bacteria → Acidobacteria	2861	Open in IMG/M
3300006050\|Ga0075028_100024798	All Organisms → cellular organisms → Bacteria → Acidobacteria	2691	Open in IMG/M
3300006059\|Ga0075017_100311208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1165	Open in IMG/M
3300006172\|Ga0075018_10701189	Not Available	547	Open in IMG/M
3300006755\|Ga0079222_11814964	Not Available	591	Open in IMG/M
3300007982\|Ga0102924_1127076	Not Available	1223	Open in IMG/M
3300007982\|Ga0102924_1175322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	958	Open in IMG/M
3300009524\|Ga0116225_1064315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1738	Open in IMG/M
3300010379\|Ga0136449_100021631	All Organisms → cellular organisms → Bacteria	16341	Open in IMG/M
3300010379\|Ga0136449_100047791	All Organisms → cellular organisms → Bacteria	9701	Open in IMG/M
3300010379\|Ga0136449_100652068	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300011120\|Ga0150983_10728345	Not Available	501	Open in IMG/M
3300011120\|Ga0150983_10850929	Not Available	652	Open in IMG/M
3300011120\|Ga0150983_11431308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	530	Open in IMG/M
3300011120\|Ga0150983_11846129	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300011120\|Ga0150983_12208548	Not Available	622	Open in IMG/M
3300011120\|Ga0150983_12212708	Not Available	522	Open in IMG/M
3300011120\|Ga0150983_12276256	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300011120\|Ga0150983_12347419	Not Available	659	Open in IMG/M
3300011120\|Ga0150983_12735881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1710	Open in IMG/M
3300011120\|Ga0150983_13177070	Not Available	602	Open in IMG/M
3300011120\|Ga0150983_13294928	Not Available	729	Open in IMG/M
3300011120\|Ga0150983_13389879	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300011120\|Ga0150983_14522615	All Organisms → cellular organisms → Bacteria	2906	Open in IMG/M
3300011120\|Ga0150983_15977957	Not Available	500	Open in IMG/M
3300011120\|Ga0150983_16157274	Not Available	599	Open in IMG/M
3300011120\|Ga0150983_16270204	Not Available	707	Open in IMG/M
3300014200\|Ga0181526_10013982	All Organisms → cellular organisms → Bacteria	5382	Open in IMG/M
3300017822\|Ga0187802_10101757	Not Available	1081	Open in IMG/M
3300017934\|Ga0187803_10244580	Not Available	710	Open in IMG/M
3300017955\|Ga0187817_10241721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1150	Open in IMG/M
3300018033\|Ga0187867_10565366	Not Available	623	Open in IMG/M
3300018034\|Ga0187863_10070816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1970	Open in IMG/M
3300018037\|Ga0187883_10739941	Not Available	514	Open in IMG/M
3300020021\|Ga0193726_1039336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2303	Open in IMG/M
3300020021\|Ga0193726_1103087	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290	Open in IMG/M
3300020579\|Ga0210407_10004118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11546	Open in IMG/M
3300020579\|Ga0210407_10212208	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300020579\|Ga0210407_10878741	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300020580\|Ga0210403_10503394	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300020580\|Ga0210403_11129494	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300020581\|Ga0210399_10845876	Not Available	745	Open in IMG/M
3300021170\|Ga0210400_10293263	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300021180\|Ga0210396_10015237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7150	Open in IMG/M
3300021180\|Ga0210396_10676210	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300021181\|Ga0210388_10044583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3685	Open in IMG/M
3300021181\|Ga0210388_10472457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1101	Open in IMG/M
3300021401\|Ga0210393_10008208	All Organisms → cellular organisms → Bacteria	8189	Open in IMG/M
3300021401\|Ga0210393_10176348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1724	Open in IMG/M
3300021420\|Ga0210394_10539974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300021432\|Ga0210384_10039030	All Organisms → cellular organisms → Bacteria → Acidobacteria	4377	Open in IMG/M
3300021433\|Ga0210391_10045516	All Organisms → cellular organisms → Bacteria	3498	Open in IMG/M
3300021478\|Ga0210402_10447171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1200	Open in IMG/M
3300021478\|Ga0210402_11223686	Not Available	678	Open in IMG/M
3300021479\|Ga0210410_10000384	All Organisms → cellular organisms → Bacteria → Acidobacteria	51850	Open in IMG/M
3300021479\|Ga0210410_10001206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	24814	Open in IMG/M
3300022532\|Ga0242655_10309236	Not Available	517	Open in IMG/M
3300022557\|Ga0212123_10551156	Not Available	737	Open in IMG/M
3300022881\|Ga0224545_1048404	Not Available	600	Open in IMG/M
3300026281\|Ga0209863_10022142	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300027565\|Ga0209219_1005426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2753	Open in IMG/M
3300027565\|Ga0209219_1173129	Not Available	512	Open in IMG/M
3300027591\|Ga0209733_1105910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300027604\|Ga0208324_1014068	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300027641\|Ga0208827_1012397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3245	Open in IMG/M
3300027660\|Ga0209736_1011599	All Organisms → cellular organisms → Bacteria → Acidobacteria	2815	Open in IMG/M
3300027768\|Ga0209772_10099681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	893	Open in IMG/M
3300027812\|Ga0209656_10063085	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300027842\|Ga0209580_10412089	Not Available	674	Open in IMG/M
3300027853\|Ga0209274_10475997	Not Available	646	Open in IMG/M
3300027857\|Ga0209166_10479345	Not Available	640	Open in IMG/M
3300027908\|Ga0209006_10855630	Not Available	733	Open in IMG/M
3300027915\|Ga0209069_11030039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	507	Open in IMG/M
3300028047\|Ga0209526_10195367	Not Available	1403	Open in IMG/M
3300028906\|Ga0308309_10033204	Not Available	3562	Open in IMG/M
3300030878\|Ga0265770_1077059	Not Available	646	Open in IMG/M
3300031040\|Ga0265754_1026720	Not Available	572	Open in IMG/M
3300031090\|Ga0265760_10002865	All Organisms → cellular organisms → Bacteria → Acidobacteria	5035	Open in IMG/M
3300031708\|Ga0310686_105377090	Not Available	1150	Open in IMG/M
3300031718\|Ga0307474_10000042	All Organisms → cellular organisms → Bacteria → Acidobacteria	96552	Open in IMG/M
3300032160\|Ga0311301_10173406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3799	Open in IMG/M
3300032160\|Ga0311301_11200709	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300032515\|Ga0348332_12317823	Not Available	535	Open in IMG/M
3300032739\|Ga0315741_10302561	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.95%
Aquatic	Environmental → Aquatic	19.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.05%
Freshwater	Environmental → Aquatic → Freshwater	12.38%
Sediment	Environmental → Aquatic → Sediment	3.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.86%
Peat	Environmental → Terrestrial → Peat	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.81%
Loam	Environmental → Terrestrial → Soil → Loam	33.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	28.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100086915	3300000567	Peatlands Soil	MFPKEENKWLALYKAALLELDLKKMPERIALASKALQERSRELQGSCGYYGEKLEIEYAIRNLHAAERMK*
JGI12270J11330_100216902	3300000567	Peatlands Soil	MFPNQEKSWLTLYKAALLELDLRKMPERIVLATKALQDRSLELQGSSGHYGEKLEIEYAVRNLHVAERMR*
JGI12679J13547_10010212	3300001174	Forest Soil	MFAYEQKKWLALYSAALLESDLQKMPGRIVLAGKALQKRLRELQGSSGHYGERLDIEYAMRNLKAAERMK*
JGIcombinedJ26739_1011204541	3300002245	Forest Soil	MFSKEQGNWLALYRAALLELDLQKMPERIALANKALQKRSRELQGVGGYYGEKLEIQYAERNLQVAERMK*
Ga0062384_1000453812	3300004082	Bog Forest Soil	VKRWLTLYRAALLELDVQKMPERIVIASKALQERERELQGSSGRYVERLEIEYAMRNLRVAERMK*
Ga0062384_1006754701	3300004082	Bog Forest Soil	MFPNEQQRWLTLYKAALLELDPDKMPERIVLANKALQERSQELQGSSGHYGERLEIEYAIRNLHVAERMK*
Ga0062387_1004584631	3300004091	Bog Forest Soil	PHEVKRWLTLYRAALLELDVQKMPERIVIASKALQERERELQGSSGRYVERLEIEYAMRNLRVAERMK*
Ga0058882_10060271	3300004121	Forest Soil	SDQARSPMFPNEQENWLALYKAALLELDLQKMPARIALANKALLDRSREIQKSDGYYWEKLEIQYAKQNLQAAERMK*
Ga0058897_107006991	3300004139	Forest Soil	YDQTGGRMFPNEQKRWLSLYKAALLELDLQKMPERIVLANRALQERSRQLQGSSGHYGEKLEIEYAMRNLHVAERMR*
Ga0058897_108893251	3300004139	Forest Soil	MIPDQQKRWLTLYKAALLELDLQKMPERIVLASKALQERSRELRGASGHYGEKLEIEYAMRNLHVAERMK*
Ga0058899_114074071	3300004631	Forest Soil	LPNEQQRWLTLYKAALLELDLQKMPERIVLASKALQKRSRELQQSSGHYGERLEIEYAIRNLHVAQRMW*
Ga0058899_116210232	3300004631	Forest Soil	KRWLTLYKAALLELDLHKMPERIGLASKALRKRARELQGSSGHYGERLEIEYAIRNLHVAERMK*
Ga0058899_121981421	3300004631	Forest Soil	ALYKAALLELDLQKMPERIALANKALQERSRELRGVGGYYGEKLEMQYAERNLQVAERMK
Ga0062388_1003361001	3300004635	Bog Forest Soil	MFPNKQKKWLTLYRAALLELDLHKMPERIVLAIKALKERSRELQGSSGHYVEQLEIEYATRNLHVAERMK*
Ga0070735_102146442	3300005534	Surface Soil	MFPNEQENWLALYKAALLELDLQKMPERIALASRALQERSRELQKSIGHYGEKLEIQYAERNLQVAERMK*
Ga0070730_107035362	3300005537	Surface Soil	MFPNEQKRWLTLYREALLELDLQKMPERIVLASRALQKRLRELQGSGGHYGEKLEIEYALRNLHVAERMK*
Ga0070733_104983522	3300005541	Surface Soil	MFPNKQENWLALYKAALLELDLQKMPERIALANKALQERSRELRGVGGYYGEKLEMQYAERNLQVAERMK*
Ga0070733_108344331	3300005541	Surface Soil	MIPNRQKRWLTLYKAALLELDLKKMPERIVLASGALRKRARELQASSGHYGEQLEIEYAIRNLQVAERMK*
Ga0070761_101629392	3300005591	Soil	MFPNQQENWLELYKAALLELDLQKMPGRIALANKALQERSRELQKSCGDYAEKLEIQYAERNLHVAKRMK*
Ga0070763_103341002	3300005610	Soil	MFPNQQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK*
Ga0070764_106245951	3300005712	Soil	MFPYEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK*
Ga0080027_100139806	3300005993	Prmafrost Soil	MFANGQREKRWLGLYKAALLESDLQKMPERIVLASKALQERSRKLQGSGSHYGEKLEIEYAIRNLHVAKRMK*
Ga0075028_1000247983	3300006050	Watersheds	MLPDGQNRWLTLYRDALLELDLQKMPDRIVRASRALQKRSRELQGSGGHYGEKLEIEYAIRNLHVAQRMK*
Ga0075017_1003112081	3300006059	Watersheds	MLPDGKKKWITLYRDALLELDLQKMPERIVLASRALQKRWQELQGSAGHFGEKLEIEYAIRNLHVAQRMK*
Ga0075018_107011892	3300006172	Watersheds	MLPDGQNRWLTLYRDALLELDLQKMPDRIVRASRALQKRSRELQGSGGHYGEKLEIEYAIRNL
Ga0079222_118149642	3300006755	Agricultural Soil	VLYKAALLESDLQKMRLRIVLAGRALQERLRKLQGTNGHYIERLEIEYAIRNLRVAERMK
Ga0102924_11270761	3300007982	Iron-Sulfur Acid Spring	MFPDKRANWVALYKAALLELDLQKMPERIALANKALQERSRELQNSYGHYGEKLEIQYAERNLHVAERMK*
Ga0102924_11753221	3300007982	Iron-Sulfur Acid Spring	YKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK*
Ga0116225_10643152	3300009524	Peatlands Soil	MSKRGSMFPNQEKSWLTLYKAALLELDLRKMPERIVLATKALQDRSLELQGSSGHYGEKLEIEYAVRNLHVAERMR*
Ga0136449_1000216316	3300010379	Peatlands Soil	MFPKEENKWLALYKAALLELDLKKMPERIALASKALQERSRELQGSCGYYGEKLEIEYVIRNLHAAERMK*
Ga0136449_1000477914	3300010379	Peatlands Soil	MFPNGQKRWLTLYREALLEMDLQKMPERIVLASRALQKRSRELQGSGGHYAEKLEIEYALRNLHVAKRMK*
Ga0136449_1006520682	3300010379	Peatlands Soil	MFPDEQKSWLTLYKAALLELDLQKMPERIVLASKALQERSRQLQGSSGHYGERLEIEYAIRNLHVAERMK*
Ga0150983_107283451	3300011120	Forest Soil	FDQARSPMFPYEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK*
Ga0150983_108509291	3300011120	Forest Soil	KRGVPMFPSEQRKWLALYKAALLELDLQKMPERIVQASRALHERSRQLQGSSGHYGEKLEIEYAMRNLHVAEKMK*
Ga0150983_114313082	3300011120	Forest Soil	MFPNKQKKWLAPYKAALLELDLKKMPERIGLARKVLQERSRELQGSNGHYGERLEIEYAIRNLHAA*
Ga0150983_118461291	3300011120	Forest Soil	CRPSEVPMFRDEQQDWLALYKAALLELDVHKMPERIALANKALQERSRELQKSCGHYGEKLEIQYAERNLQVAQRMK*
Ga0150983_122085482	3300011120	Forest Soil	MYPTEQKRWLTLYRAALLELDLQKMPERIVQASQELRKRARELQGSSGHYVERLEIEYAIRNLHVAERMK*
Ga0150983_122127082	3300011120	Forest Soil	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQKRSRELQKSCGHYGEKLEIQYAERNLQVAERMK*
Ga0150983_122762563	3300011120	Forest Soil	MYPDKQKRWLTLYKAALLELDLHKMPERIGLASKALRKRARELQGSSGHYGERLEIEYAIRNLHVAERMK*
Ga0150983_123474192	3300011120	Forest Soil	MFPKAQKKWLAPYKAALLELDLQKMPERIALASKALQERSRELQTCGGYDGEKLEIDYAMRNLQAAKRMT*
Ga0150983_127358812	3300011120	Forest Soil	MIPDQQKRWLTLYKASLLELDLQKMPERIVLASKALQERSRELRGASGHYGEKLEIEYAMRNLHVAERMK*
Ga0150983_131770702	3300011120	Forest Soil	MFPNKQKRWLTLYKAALLELDLQKMPQRIVLASKALQERSRELQGSSGHCVERLEIEYAIRNLHVAERMK*
Ga0150983_132949281	3300011120	Forest Soil	IDDQMGCPMFPNGEKRWLTLYRDALLELDLRKMPERIVLASRALQKRSRELQGTGGHYGEKLEIEYAIRNLHVAERMK*
Ga0150983_133898792	3300011120	Forest Soil	MFRNEQKRWLTLYKAALLEPDLQKMPERIVRASRALHERSRELQGSGGHYGERLEIEYAIRNLHVAERMK*
Ga0150983_145226154	3300011120	Forest Soil	MIPKQKKRWLTLYKAALLEMDLQKMPERIVMASQALQQRSRELQGASGHYVERLEIGYAIQNLHAAERMK*
Ga0150983_159779571	3300011120	Forest Soil	DDQTGCPMLPNGEKRWLTLYRNALLERDLRKMPERIVLASRALQKRSRELKGTGGHYGEKLEIEYAIRNLHVAERMK*
Ga0150983_161572741	3300011120	Forest Soil	PMFSNGQKQKRWLALYKAALLELDLQKMPERIIRASKALQERSQQLQGSGGHYGERLEIEYAMRNLHVAEKMK*
Ga0150983_162702042	3300011120	Forest Soil	FDQGRSPMFPNEQENWLALYKAALLELDLQKMPGRIALANKALQERSRELQKSCGQYGEKLEIQYAQRNLQVAERMK*
Ga0181526_100139826	3300014200	Bog	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGERLEIQYAERNLHVAERMK*
Ga0187802_101017571	3300017822	Freshwater Sediment	MLPNGQQNWLDLYRAALLELDLEKMPERIALAKKALQERWEEIQKSCGHYGEKLEIEYAKRNLQVAKRMR
Ga0187803_102445802	3300017934	Freshwater Sediment	MFPDEQKSWLTLYKAALLELDLQKMPERIVLASEALQERSRQLQGSSGHYGERLEIEYAIRNLHVAERMK
Ga0187817_102417211	3300017955	Freshwater Sediment	GVAMFPDEQKSWLTLYKAALLELDLQKMPERIVLASEALQERSRQLQGSSGHYGERLEIEYAIRNLHVAERMK
Ga0187867_105653662	3300018033	Peatland	MFPNQQENWLALYKAALLELDLQKMPERIALANKALQERLRELQKSCGHYGERLEIQYAERNLHVAERMK
Ga0187863_100708161	3300018034	Peatland	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGERLEIQYAERNLHVAERMK
Ga0187883_107399412	3300018037	Peatland	MFPNQQENWLTLYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGERLEIQYAERNLHVAERMK
Ga0193726_10393362	3300020021	Soil	MFPNGQRQRRWIALYRAALLELDPQKMPERILLASKALRERSRKLQGSGGHYGEKLEIEYAIRNLHVAEKMK
Ga0193726_11030872	3300020021	Soil	MLPPQQNKQNKWLALYKAALLESDLRKMPDRIVRAGKALQNRLRDLQGSSGHYGERIDIEYAIRNLKAAERMK
Ga0210407_100041187	3300020579	Soil	MYPDKQKRWLTLYKAALLELDLHKMPERIGLASKALRKRARELQGSSGHYGERLEIEYAIRNLHVAERMK
Ga0210407_102122082	3300020579	Soil	MFRDEQQDWLALYKAALLELDVHKMPERIALANKALQERSRELQKSCGHYGEKLEIQYAERNLQVAQRMK
Ga0210407_108787412	3300020579	Soil	MYPTEQKRWLTLYRAALLELDLQKMPERIVQASQELRKRARELQGSSGHYVERLEIEYAIRNLHVAERMK
Ga0210403_105033941	3300020580	Soil	MYPDKQKRWLTLYKAALLELDLHKMPERIGLASKALRKRARELQGSSGHYGERLEIEYAI
Ga0210403_111294941	3300020580	Soil	LYKAALLELDVHKMPERIALANKALQERSRELQKSCGHYGEKLEIQYAERNLQVAQRMK
Ga0210399_108458762	3300020581	Soil	MFPNKQENWLALYKAALLELDLQKMPERIALANKALQERSRELRGVGGYYGEKLEMQYAERNLQVAERMK
Ga0210400_102932633	3300021170	Soil	MSPNEQENWLALYRAALLELDLQKMPERIALANKALQERSRELQGVGGHYGEKLEIQYAERNLQVAERMK
Ga0210396_100152373	3300021180	Soil	MFPNEQENWLALYKAALLELDLQKMPQRIALANKALQERSQELQKSCGHYGEKLEIQYAERNLQVAERMK
Ga0210396_106762102	3300021180	Soil	MFPYEQENWIALYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGEKLEIQYAERNLHVAKRMK
Ga0210388_100445833	3300021181	Soil	VLRPSEESDVPQQQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAGRMR
Ga0210388_104724571	3300021181	Soil	SDVPQQQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK
Ga0210393_100082087	3300021401	Soil	MFPYEQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAERMK
Ga0210393_101763483	3300021401	Soil	MFPNKQKRWLTLYKAALLESDLQKMPERIVRASKALQERSRELQGSGGHYGERLEIEYAIRNLHVAERMK
Ga0210394_105399741	3300021420	Soil	HYQPEGPMYPDKQKRWLTLYKAALLELDLHKMPERIGLASKALRKRARELQGSSGHYGERLEIEYAIRNLHVAERMK
Ga0210384_100390305	3300021432	Soil	MIPKQKKRWLTLYKAALLEMDLQKMPERIVMASQALQQRSRELQGASGHYVERLEIGYAIQNLHAAERMK
Ga0210391_100455162	3300021433	Soil	MFPNQQENWLALYKAALLELDLQKMPERIALANKALQERSRELRGVGGYYGEKLEMQYAERNLQVAERMK
Ga0210402_104471711	3300021478	Soil	MFPNKQKKWLAPYKAALLELDLKKMPERIGLARKVLQERSRELQGSNGHYGERLEIEYAIRNLHAAERMTSLGTSKT
Ga0210402_112236862	3300021478	Soil	MIPNGQKTWLTLYRDALLELDLRKMPERIGLASRALQKRSRELQQSGGHYGEKLEIEYAMRNLHIAERMK
Ga0210410_1000038450	3300021479	Soil	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQKRSRELQKSCGHYGEKLEIQYAERNLHVAERMK
Ga0210410_100012069	3300021479	Soil	MFRNEQKRWLTLYKAALLEPDLQKMPERIVRASRALHERSRELQGSGGHYGERLEIEYAIRNLHVAERMK
Ga0242655_103092361	3300022532	Soil	CPMLPNGEKRWLTLYRNALLERDLRKMPERIVLASRALQKRSRELKGTGGHYGEKLEIEYAIRNLHVAERMK
Ga0212123_105511561	3300022557	Iron-Sulfur Acid Spring	MFPDERAKWVALYKAALLELDLQKMPERIALANKALQERSRELQNSYGHYGEKLEIQYAERNLHVAERMK
Ga0224545_10484041	3300022881	Soil	RWLHLYRAALLELDLQKMPERIVLASKALQQRSRELQGSGNHHGERLEIEYAIRNLRVAKRMQ
Ga0209863_100221422	3300026281	Prmafrost Soil	MFANGQREKRWLGLYKAALLESDLQKMPERIVLASKALQERSRKLQGSGSHYGEKLEIEYAIRNLHVAKRMK
Ga0209219_10054262	3300027565	Forest Soil	MFAYEQKKWLALYSAALLESDLQKMPGRIVLAGKALQKRLRELQGSSGHYGERLDIEYAMRNLKAAERMK
Ga0209219_11731292	3300027565	Forest Soil	NEQQKWLNLYKAALLELDLQKMPERIVVASKALHERSRELQGSGGHYGERLEIECAIRNLQVAERMK
Ga0209733_11059102	3300027591	Forest Soil	MFSNKQDNWLALYKAALLELDLQKMPERIALANKALQERSRELQGVGGYYGEKLEIQYAERNLLVAERMK
Ga0208324_10140682	3300027604	Peatlands Soil	MFPKEENKWLALYKAALLELDLKKMPERIALASKALQERSRELQGSCGYYGEKLEIEYAIRNLHAAERMK
Ga0208827_10123971	3300027641	Peatlands Soil	MFPNQEKSWLTLYKAALLELDLRKMPERIVLATKALQDRSLELQGSSGHYGEKLEIEYAVRNLHVAERMR
Ga0209736_10115992	3300027660	Forest Soil	MFPYEQKKWLALYSAALLESDLQKMPGRIVLAVKALQKRLRELQGSSGHYGERLDIQYAMRNLKAAERMK
Ga0209772_100996812	3300027768	Bog Forest Soil	MFPNEQQRWLTLYKAALLELDPDKMPERIVLANKALQERSQELQGSSGHYGERLEIEYAIRNLHVAERMK
Ga0209656_100630853	3300027812	Bog Forest Soil	MFPNKQQAWLSLYKAALLELDLQKMPERIVLASKALEERSRQLQGSSGHYGERLEIEYAIRNLHVAKRMK
Ga0209580_104120892	3300027842	Surface Soil	MFPNEQENWLALYKAALLELDLQKMPERIALASRALQERSRELQKSIGHYGEKLEIQYAERNLQVAERMK
Ga0209274_104759971	3300027853	Soil	MFPNQQENWLELYKAALLELDLQKMPGRIALANKALQERSRELQKSCGDYAEKLEIQYAERNLHVAKRMK
Ga0209166_104793452	3300027857	Surface Soil	MFPNEQKRWLTLYREALLELDLQKMPERIVLASRALQKRLRELQGSGGHYGEKLEIEYALRNLHVAERMK
Ga0209006_108556301	3300027908	Forest Soil	MFSEGQKGWFDLYRAALLELDLQKMPKRIVLASKALQRRSQELQVSSGEWGEKLEINYAIRNLHVAERMK
Ga0209069_110300392	3300027915	Watersheds	MTKRGVPMLLNGQKRWLTLYRDALLELDLQKMPERIVLACEALQKRSRELQGSGGHYGEKLEIEYALRNLHVAERMK
Ga0209526_101953671	3300028047	Forest Soil	MFSKEQGNWLALYRAALLELDLQKMPERIALANKALQKRSRELQGVGGYYGEKLEIQYAERNLQVAERMK
Ga0308309_100332046	3300028906	Soil	MFPNEQENWLALYKAALLELDLQKMPARIALANKALQERSREIQKSSGYYWEKLEIQYAKQNLQAAERMK
Ga0265770_10770592	3300030878	Soil	SEESDVPQQQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGYYGERLDIQYAERNLHVAGRMR
Ga0265754_10267201	3300031040	Soil	MFPNEQENWLALYKAALLELDLQKMPERIALANKALQERSREIQKSCGYYWEKLEIQYAKQNLQAAERMK
Ga0265760_100028651	3300031090	Soil	MFPNEQENWLALYKAALLELDLQKMPARIALANKALQERSREIQKSCGYYWEKLEIQYAKQNLQAAERMK
Ga0310686_1053770901	3300031708	Soil	MFPHKEENWLALYKAALLELDLQKMPERIALANKALQERSRELQGVGGYYGEKLEIQYAERNLQVAERMK
Ga0307474_1000004223	3300031718	Hardwood Forest Soil	MFPNEQENWLTLYKAALLELDLKKMPERIALANKALQERSRELQKSCGYYGEKLEIQYAKQNLQVAERMK
Ga0311301_101734063	3300032160	Peatlands Soil	MFPNGQKRWLTLYREALLEMDLQKMPERIVLASRALQKRSRELQGSGGHYAEKLEIEYALRNLHVAKRMK
Ga0311301_112007092	3300032160	Peatlands Soil	MFPDEQKSWLTLYKAALLELDLQKMPERIVLASKALQERSRQLQGSSGHYGERLEIEYAIRNLHVAERM
Ga0348332_123178231	3300032515	Plant Litter	MFPNQQENWLALYKAALLELDLQKMPERIALANKALQERSRELQKSCGHYGEKLEIQYAERNLHVAERMK
Ga0315741_103025611	3300032739	Forest Soil	LYRAALLELDLHKMPERIVLAIKALKERSRELQGSSGHYVEQLEIEYATRNLHVAERMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences