Metagenome / Metatranscriptome Family F095979

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095979
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	REPRTSGAAGRAALELAERVMASIQEHGERVQLLAFAAAQKTDK
Number of Associated Samples	85
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (31.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.39% β-sheet: 0.00% Coil/Unstructured: 48.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13103	TonB_2	7.62
PF16360	GTP-bdg_M	2.86
PF01715	IPPT	1.90
PF01745	IPT	1.90
PF13167	GTP-bdg_N	0.95
PF01346	FKBP_N	0.95
PF01066	CDP-OH_P_transf	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	1.90
COG0545	FKBP-type peptidyl-prolyl cis-trans isomerase	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.95
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.95
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.43 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.67 %
Unclassified	root	N/A	8.57 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.19 %
Unclassified	root	N/A	8.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	8.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.71 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	8.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.71 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01CJ660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1094584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300001867\|JGI12627J18819_10122560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300002912\|JGI25386J43895_10105028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300002914\|JGI25617J43924_10133729	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300002914\|JGI25617J43924_10316038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300003505\|JGIcombinedJ51221_10038549	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300004635\|Ga0062388_101292964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005367\|Ga0070667_100229386	Not Available	1655	Open in IMG/M
3300005439\|Ga0070711_101421412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005518\|Ga0070699_101069498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300005538\|Ga0070731_10929398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300006174\|Ga0075014_100611636	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300006176\|Ga0070765_101549551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300006800\|Ga0066660_10674017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300006800\|Ga0066660_10835581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300006904\|Ga0075424_102402361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009012\|Ga0066710_103542523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300009088\|Ga0099830_10044785	All Organisms → cellular organisms → Bacteria → Acidobacteria	3089	Open in IMG/M
3300009088\|Ga0099830_10622600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300009088\|Ga0099830_11367566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300009090\|Ga0099827_10050696	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300009137\|Ga0066709_102806773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300009143\|Ga0099792_10587505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300009792\|Ga0126374_11570003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010335\|Ga0134063_10284792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300010358\|Ga0126370_10133209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1783	Open in IMG/M
3300010359\|Ga0126376_10147231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1881	Open in IMG/M
3300010396\|Ga0134126_11852718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300010858\|Ga0126345_1032665	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300011269\|Ga0137392_10040319	All Organisms → cellular organisms → Bacteria → Acidobacteria	3455	Open in IMG/M
3300012096\|Ga0137389_10756042	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300012189\|Ga0137388_10954091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300012351\|Ga0137386_10834272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012363\|Ga0137390_11833736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012582\|Ga0137358_10235957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1246	Open in IMG/M
3300012918\|Ga0137396_10042821	All Organisms → cellular organisms → Bacteria → Acidobacteria	3069	Open in IMG/M
3300012918\|Ga0137396_10249164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300012918\|Ga0137396_10333722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1122	Open in IMG/M
3300012922\|Ga0137394_10838194	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300012923\|Ga0137359_11054253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012944\|Ga0137410_10378401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300014199\|Ga0181535_10175482	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300016750\|Ga0181505_10274173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300017955\|Ga0187817_10380386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300017959\|Ga0187779_10281929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300020579\|Ga0210407_10857016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300020579\|Ga0210407_11087965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300020580\|Ga0210403_10066084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2902	Open in IMG/M
3300020583\|Ga0210401_10054196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3784	Open in IMG/M
3300020583\|Ga0210401_10354229	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300020583\|Ga0210401_11022979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300021046\|Ga0215015_10823242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300021086\|Ga0179596_10145613	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300021086\|Ga0179596_10585632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300021170\|Ga0210400_11462608	Not Available	543	Open in IMG/M
3300021178\|Ga0210408_11017696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300021401\|Ga0210393_10053798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3167	Open in IMG/M
3300021401\|Ga0210393_11232290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300021402\|Ga0210385_10957075	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300021403\|Ga0210397_10075475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2221	Open in IMG/M
3300021403\|Ga0210397_10967085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300021404\|Ga0210389_10699162	Not Available	794	Open in IMG/M
3300021406\|Ga0210386_10222346	All Organisms → cellular organisms → Bacteria → Acidobacteria	1605	Open in IMG/M
3300021406\|Ga0210386_10694104	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300021474\|Ga0210390_10393871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300021475\|Ga0210392_10246409	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300021475\|Ga0210392_10431438	Not Available	964	Open in IMG/M
3300021475\|Ga0210392_10457025	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300021478\|Ga0210402_10045489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3827	Open in IMG/M
3300021479\|Ga0210410_11026328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300021559\|Ga0210409_11562598	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300021560\|Ga0126371_10995554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300024182\|Ga0247669_1039299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300025986\|Ga0207658_10203325	Not Available	1655	Open in IMG/M
3300026316\|Ga0209155_1188322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300026542\|Ga0209805_1284937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027097\|Ga0208861_103380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300027370\|Ga0209010_1066682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300027512\|Ga0209179_1084525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300027535\|Ga0209734_1042729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300027562\|Ga0209735_1125294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300027635\|Ga0209625_1061671	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300027767\|Ga0209655_10000127	All Organisms → cellular organisms → Bacteria	27662	Open in IMG/M
3300027842\|Ga0209580_10117396	Not Available	1296	Open in IMG/M
3300027846\|Ga0209180_10024170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3235	Open in IMG/M
3300027869\|Ga0209579_10740435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300027895\|Ga0209624_10276718	All Organisms → cellular organisms → Bacteria → Acidobacteria	1117	Open in IMG/M
3300027986\|Ga0209168_10243618	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300028536\|Ga0137415_10601455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300028906\|Ga0308309_10325917	Not Available	1304	Open in IMG/M
3300028906\|Ga0308309_11152220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300028906\|Ga0308309_11657791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300030596\|Ga0210278_1142322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031057\|Ga0170834_114039466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300031231\|Ga0170824_103675591	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300031754\|Ga0307475_10265685	Not Available	1375	Open in IMG/M
3300031754\|Ga0307475_10593764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300031823\|Ga0307478_10070495	All Organisms → cellular organisms → Bacteria → Acidobacteria	2642	Open in IMG/M
3300031823\|Ga0307478_11542501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031962\|Ga0307479_10708169	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300031962\|Ga0307479_10839953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300032205\|Ga0307472_100915701	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300032515\|Ga0348332_10292312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.19%
Host-Associated	Host-Associated	2.86%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.52%
Aquatic	Environmental → Aquatic	6.67%
Plants	Host-Associated → Plants	2.86%
Solid Waste	Engineered → Solid Waste	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.57%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Sediment	Environmental → Aquatic → Sediment	1.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%
Grass	Engineered → Solid Waste → Grass	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.33%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%
Composting	Engineered → Solid Waste → Grass → Composting	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027097	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF019 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00034680	2170459016	Switchgrass, Maize And Mischanthus Litter	AVRTRREPRTNGAAGRAALELASRVMASIQEHGERVQVAAFASKEKAGK
AF_2010_repII_A100DRAFT_10945841	3300000655	Forest Soil	RKEPPTNGAAGRAALELAGRVMASIQEHAARVQPEALAARENTTL*
JGI12627J18819_101225601	3300001867	Forest Soil	VRTRTEPRVNGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTEK*
JGI25386J43895_101050281	3300002912	Grasslands Soil	EPRTNGAAGRAALELASRVMASIQEHAARVQXGSFATQDKTR*
JGI25617J43924_101337292	3300002914	Grasslands Soil	FIDAARSRKEPRTNGAAGRAALELASRVMASIQEHAARVQIGSFATQDKTR*
JGI25617J43924_103160382	3300002914	Grasslands Soil	RREPRTNGAAGRAALELAGRVMASIQEHAARVQIGTFAIQDKTR*
JGIcombinedJ51221_100385491	3300003505	Forest Soil	NGAAGRAVLELATRVMASIQEHGERVQLAAFASQEKAGK*
Ga0062388_1012929641	3300004635	Bog Forest Soil	LEAARTRREPRTNGTAGRAALELATRVMASIQEHGERVQLAAFASQEKAGR*
Ga0070667_1002293861	3300005367	Switchgrass Rhizosphere	SGSAGRAALEVAERVMASIQEHGERVQLLAFSAAQKTEK*
Ga0070711_1014214122	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PRTSGTAGRAALEVAERVMASIQEHGERVQLLAFSTAQKTER*
Ga0070699_1010694982	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AAGRAALELAGRVMASIQEHSERVQLVAFAAAQKIENDS*
Ga0070731_109293982	3300005538	Surface Soil	GRAALELASRVMASIHEHADRVQVGAFAAQAKTDK*
Ga0075018_107415822	3300006172	Watersheds	RAALELAGRVMTSILEHAERVQLGAFSTQQKANL*
Ga0075014_1006116362	3300006174	Watersheds	EAARTRREPRTSGRSGRAALELAERVMASIQEHGERVQLSAFAAAQKTDE*
Ga0070765_1015495511	3300006176	Soil	RAALELAERVMASIQEHGERVQLSSFAAAQKTDE*
Ga0066660_106740171	3300006800	Soil	NGAAGRAALELATRVMASIQEHAARVQIGSFATQDKTR*
Ga0066660_108355812	3300006800	Soil	PTNGAAGREALALAGRVMASIQEHAARVQPEALAAREITTL*
Ga0075424_1024023611	3300006904	Populus Rhizosphere	RTSGTAGRAALEVAERVMASIQEHGQRVQLLAFSTAQKTER*
Ga0066710_1035425232	3300009012	Grasslands Soil	NGPAGRAALELATRVMASIQEHGDRVQLGAFSTQQKANR
Ga0099830_100447854	3300009088	Vadose Zone Soil	SFVDAVRMRSEPRVNGEAGRADLELAGRVMARIKEHGERVQLVAFAAAQKTEK*
Ga0099830_106226001	3300009088	Vadose Zone Soil	SGAAGRAALELAGRVMSSIQEHAERVQLSALAAPSKTGK*
Ga0099830_113675661	3300009088	Vadose Zone Soil	GAAGRAALELAGRVMASIQEHAARVQLGSFATQAKTR*
Ga0099827_100506965	3300009090	Vadose Zone Soil	VRIGASPRVDGAAGRRALELADRVVASILDHGRRVQLGAFAIH*
Ga0066709_1028067732	3300009137	Grasslands Soil	HAELEAFIDAVRPRRQPRTSGKAGRAALEVAESVMASIQEHGERVQLLAFSATQKIEK*
Ga0099792_105875052	3300009143	Vadose Zone Soil	LNAVRTRNEPRTNGAAGRAALELAVRVMASIQEHAARVQIGSFATQDKTR*
Ga0126374_115700032	3300009792	Tropical Forest Soil	RTSGAAGRIALELAERVMASIQEHGERVQLLAFASAQKTEK*
Ga0134063_102847921	3300010335	Grasslands Soil	KEPRTNGTAGRAALELATRVMASIQEHAARVQIGSFATQDKTR*
Ga0126370_101332091	3300010358	Tropical Forest Soil	KEPPTNGTAGRAALALAGRVMASIQEHAARVQPEALAARENTRE*
Ga0126376_101472311	3300010359	Tropical Forest Soil	AVRAALELAGRVMASIQEHAARVQPEALAARENTTL*
Ga0134126_118527182	3300010396	Terrestrial Soil	AVRTRREPRTSGTAGRAALEVAERVMASIQEHGERVQLLAFSAAQKTEK*
Ga0126345_10326652	3300010858	Boreal Forest Soil	AELQAFLDSVGTRREPRTSGASGRAALELASRVMASIQEHGERVQLAAFASQEKAGK*
Ga0137392_100403195	3300011269	Vadose Zone Soil	FVDAARSRQEPRTNGAAGRAALELAGRVMASIQEHAARVQIGSFATQDKTR*
Ga0137389_107560421	3300012096	Vadose Zone Soil	VNGAAGRAALELAARVMTSIQEHGERVQLVAFAAAQKIDK*
Ga0137388_109540911	3300012189	Vadose Zone Soil	EPRTNGAAGRAAIELASRVMANIQEHAARVQIGSFATQDKTR*
Ga0137386_108342721	3300012351	Vadose Zone Soil	TRKEPPTNGAAGRAALALAGRVMASIQEHAARVQPEALAARENSTT*
Ga0137390_118337362	3300012363	Vadose Zone Soil	FVDSVRTRKEPRVNGAAGRAALELAARVMTSIQEHGERVQLVAFAAAQKIDK*
Ga0137358_102359571	3300012582	Vadose Zone Soil	RTEPRVNGAAGRAALELAARVMASIQERGERVQLVAFAAAQKTENDS*
Ga0137396_100428214	3300012918	Vadose Zone Soil	GRAALELAARVMASIQEHGERVQLLAFAAAQKTEK*
Ga0137396_102491642	3300012918	Vadose Zone Soil	AGRAALELAARVMASIQEHGERVQLVAFAAAQKTEK*
Ga0137396_103337222	3300012918	Vadose Zone Soil	VNASRSRKEPRTNGAAGRAALELATRVMASIQEHAARVQIGSFATQDKTR*
Ga0137394_108381941	3300012922	Vadose Zone Soil	GRAALELAARVMASIQEHGERVQLVAFAAAQKTEK*
Ga0137359_110542531	3300012923	Vadose Zone Soil	AFVDAARTRKEPKTNGAAGRAALELASRVMASIQEHAERVQLEAVSSHEKATR*
Ga0137410_103784012	3300012944	Vadose Zone Soil	RAALELASRVMASIQEHAERVQLEAVSSQEKTTR*
Ga0181535_101754821	3300014199	Bog	VRTRVAPKTDGAAGRAALELANAVMASIREHAARVQPVALTGVEKT*
Ga0181505_102741732	3300016750	Peatland	DGAAGRAALELANAVMASIREHAARVQPVALTGVEKT
Ga0187817_103803861	3300017955	Freshwater Sediment	AVRTRREPRTNGAAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0187779_102819291	3300017959	Tropical Peatland	EAGRAALELASRVMASILEHGDRVQLAAFSAPQKVN
Ga0210407_108570161	3300020579	Soil	AVRTRREPPTNGAAGRAALELATRVMASIQEHGERVQLAAFASQEKAGK
Ga0210407_110879651	3300020579	Soil	WLAEQFGRAALELASRVMASIQEHCERVQLAAFASQEKAGK
Ga0210403_100660845	3300020580	Soil	WRAALELASRVMESIREHEARVQPVAQSKREKMNQ
Ga0210401_100541961	3300020583	Soil	REPRTNGTAGRAALELASRVMASIQEHGARVQVAAFASQEKAGK
Ga0210401_103542291	3300020583	Soil	TRREPPTNGAAGRAALELATRVMASIQEHGERVQIAAFASQEKAGK
Ga0210401_110229792	3300020583	Soil	RTSGRSGRAALELAQRVMASIQEHGERVQLSAFAAAQKTDE
Ga0215015_108232422	3300021046	Soil	VDAVRTGSEPRVDGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTET
Ga0179596_101456131	3300021086	Vadose Zone Soil	RTEPRVNGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTEK
Ga0179596_105856322	3300021086	Vadose Zone Soil	FINAVRSRKEPRTNGVAGRAALELAGRVMASIQEHAERVQIGTFAIQDKTR
Ga0210400_114626082	3300021170	Soil	RAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210408_110176962	3300021178	Soil	REPRTSGAAGRAALELAERVMASIQEHGERVQLLAFAAAQKTDK
Ga0210393_100537984	3300021401	Soil	AAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0210393_112322902	3300021401	Soil	FLEAVGTRREPPTNGAAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0210385_109570751	3300021402	Soil	GGRAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210397_100754751	3300021403	Soil	TEPRTNGAAGRAALELASRVMASIQEHGARVQVAAFASQEKAGK
Ga0210397_109670851	3300021403	Soil	AGRAALELATRVMASIQEHGERVQLAAFASQEKAGK
Ga0210389_106991622	3300021404	Soil	AGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210386_102223461	3300021406	Soil	GAAGRAALELATRVMASIQEHGERVQLAAFASQEKAGK
Ga0210386_106941042	3300021406	Soil	TGGRAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210390_103938711	3300021474	Soil	PTNGAAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0210392_102464092	3300021475	Soil	CVRTRREPRTGGRAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210392_104314382	3300021475	Soil	ELEEFLDCIRTRREPRTGGRAGRAALDLAQRVMTSIHEHGERVQLLAFAAAQKIDE
Ga0210392_104570252	3300021475	Soil	EPGTAGRAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0210402_100454891	3300021478	Soil	EPRTNGAAGRAALELASRVMASIQEHAARVQIGTFATQDKTR
Ga0210410_110263282	3300021479	Soil	GTAGRAALELASRVMASIQEHGARVQVAAFASQEKAGK
Ga0210409_115625981	3300021559	Soil	RTRSEPRVNGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTDK
Ga0126371_109955542	3300021560	Tropical Forest Soil	VRTRREPRTDGVAGRAALELASRVMASIHEHADRVQVGAFAAQAKTDK
Ga0247669_10392991	3300024182	Soil	RREPRTNGAAGRAALELASRVMASIQEHGERVQVAAFASREKARK
Ga0207658_102033253	3300025986	Switchgrass Rhizosphere	SGSAGRAALEVAERVMASIQEHGERVQLLAFSAAQKTEK
Ga0209155_11883222	3300026316	Soil	AAGRAALALAGRVMASIQEHAARVQPEALAARENSTT
Ga0209805_12849371	3300026542	Soil	RTSGKAGRAALEVAESVMASIQEHGERVQLLAFSATQKIEK
Ga0208861_1033801	3300027097	Forest Soil	QFGRAASELASHVLASIQEHGERVQLAAFASQEKAGK
Ga0209010_10666821	3300027370	Forest Soil	TGRAALELAERVMASIQEHGERVQLLAFATAQKTDK
Ga0209179_10845252	3300027512	Vadose Zone Soil	RTRTEPRVNGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTEK
Ga0209734_10427291	3300027535	Forest Soil	AVRTRTEPRVNGAAGRAALELAARVMASIQEHGERVQLAAFAAAQKIDK
Ga0209735_11252941	3300027562	Forest Soil	TRSEPRVNGEAGRAALELAGRVMASIQEHGERVQLLAFAAAQKTEK
Ga0209625_10616711	3300027635	Forest Soil	ELEAFVESVRSRHEPRTSGRSGRAALELAERVMASIQEHGERVQLSAFAAAQKTDE
Ga0209655_100001271	3300027767	Bog Forest Soil	TRREPPTSGAAGRAALELATRVMGSIQEHGERVQLAAFASQEKAGK
Ga0209580_101173961	3300027842	Surface Soil	SSSAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTDK
Ga0209180_100241701	3300027846	Vadose Zone Soil	VRTRREPRTNGAAGRAALELASRVMASIQEHGERVQLAAFATEEKAKK
Ga0209579_107404351	3300027869	Surface Soil	GAAGRAALELASRVMASIHEHADRVQVGAFAAQAKTDK
Ga0209624_102767181	3300027895	Forest Soil	PRTSGRAGRAALELAERVMSSIQEHGERVQLLAFATAQKTNE
Ga0209168_102436181	3300027986	Surface Soil	RTGGRAGRAALDLAQRVMTSIQEHGERVQLLAFAAAQKIDE
Ga0137415_106014551	3300028536	Vadose Zone Soil	SRKEPRTNGAAGRAALELAGRVMASIQEHAARVQIGSLATQDKAR
Ga0308309_103259172	3300028906	Soil	PRTGGRAGRAALELAERVMASIQEHGERVQLSSFAAAQKTDE
Ga0308309_111522202	3300028906	Soil	RTNGAAGRAALELATRVMASIQEHGERVQLAAFASQEKAGK
Ga0308309_116577911	3300028906	Soil	VGTRREPRTNGAAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0210278_11423221	3300030596	Soil	AFLEAVGTRREPPTNGAAGRAALELASGVMASIQEHGERVQLAAFVSQEKAGK
Ga0170834_1140394661	3300031057	Forest Soil	GRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0170824_1036755911	3300031231	Forest Soil	DAVRTRREPRTGGRAGRAALDLAERVMASIQGHAERVQLLAFAAAQKIDE
Ga0307475_102656851	3300031754	Hardwood Forest Soil	VRTRSEPRVNGAAGRAALELAARVMASIQEHGERVQLVAFAAAQKTDK
Ga0307475_105937642	3300031754	Hardwood Forest Soil	GAAGRAALELASRVMASIQEHGERVQLAAFASQEKAGK
Ga0307478_100704951	3300031823	Hardwood Forest Soil	GAAGRAALELAGRVMASIQEHAARVQLGTFATQDKTR
Ga0307478_115425012	3300031823	Hardwood Forest Soil	AEQFGRTALELASRVMASIQEHHERVQLAAFASQEKAGK
Ga0307479_107081691	3300031962	Hardwood Forest Soil	AGRAALELAVRVMASIQEHGERVQLVAFAAAQKTEK
Ga0307479_108399532	3300031962	Hardwood Forest Soil	FLDAVSTRCEPRTSGTAGRAALELAARVMTSIQEHGERVQLLAFAATQKTDK
Ga0307472_1009157012	3300032205	Hardwood Forest Soil	SFVDSVRTRNEPRVNGAAGRAALELAGRVMASIQEHGERVQLVAFAGAQKSEK
Ga0348332_102923122	3300032515	Plant Litter	FLEAVGTRREPPTNGAAGRAALELASRVMASIQEHGERVQPAAFASQEKAGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095979

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences