Metagenome / Metatranscriptome Family F095896

Basic Information
Family ID	F095896
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	80 residues
Representative Sequence	MSMDPGNTSRTPRPPDHLEREESRLWRWALGFMVLLAVALAGLLWERLENIPFQLRAIPIGVLVLSILFAVYAYGRRRE
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.46 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (96.190 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.429 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.952 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.07% β-sheet: 0.00% Coil/Unstructured: 43.93%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13541	ChlI	34.29
PF02687	FtsX	0.95
PF00989	PAS	0.95
PF00881	Nitroreductase	0.95
PF00135	COesterase	0.95
PF07238	PilZ	0.95
PF02517	Rce1-like	0.95
PF12876	Cellulase-like	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.95
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.43 %
Unclassified	root	N/A	3.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.57 %
Unclassified	root	N/A	3.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.57 %
Unclassified	root	N/A	3.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.57 %
Unclassified	root	N/A	3.81 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.57 %
Unclassified	root	N/A	3.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.95 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.57 %
Unclassified	root	N/A	3.81 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.57 %
Unclassified	root	N/A	3.81 %
Streptomyces mobaraensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mobaraensis	0.95 %
Bacillus alveayuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus alveayuensis	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1058419	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300003505\|JGIcombinedJ51221_10442980	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005165\|Ga0066869_10063039	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005177\|Ga0066690_10238142	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300005177\|Ga0066690_10790047	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005454\|Ga0066687_10892733	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005526\|Ga0073909_10117062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300005526\|Ga0073909_10425063	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005538\|Ga0070731_10296769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300005542\|Ga0070732_10352280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300005542\|Ga0070732_10415563	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300005587\|Ga0066654_10867826	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005591\|Ga0070761_10351164	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005602\|Ga0070762_10255189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300005764\|Ga0066903_101021040	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005764\|Ga0066903_108960340	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005994\|Ga0066789_10355698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300006162\|Ga0075030_100699066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006174\|Ga0075014_100489056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300006358\|Ga0068871_102096882	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006893\|Ga0073928_11208357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mobaraensis	509	Open in IMG/M
3300006914\|Ga0075436_101543051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus alveayuensis	505	Open in IMG/M
3300009174\|Ga0105241_11384303	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009519\|Ga0116108_1240809	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009524\|Ga0116225_1327352	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009628\|Ga0116125_1190402	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009698\|Ga0116216_10460409	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300009792\|Ga0126374_11411263	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009839\|Ga0116223_10091210	Not Available	1935	Open in IMG/M
3300010048\|Ga0126373_10217020	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300010048\|Ga0126373_10726269	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300010343\|Ga0074044_10843746	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010361\|Ga0126378_11994288	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010379\|Ga0136449_102513184	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300010876\|Ga0126361_10262776	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012206\|Ga0137380_11036583	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012927\|Ga0137416_12250560	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012955\|Ga0164298_10259475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300012984\|Ga0164309_11949182	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300014168\|Ga0181534_10752883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300015373\|Ga0132257_100942749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300015373\|Ga0132257_103531050	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300016357\|Ga0182032_11007596	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300016404\|Ga0182037_10680589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300016422\|Ga0182039_11778412	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300017822\|Ga0187802_10152595	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300017930\|Ga0187825_10300036	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300017934\|Ga0187803_10176178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300017955\|Ga0187817_10628333	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300017959\|Ga0187779_10656737	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300017975\|Ga0187782_10806967	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300017975\|Ga0187782_11255343	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017993\|Ga0187823_10323295	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300018086\|Ga0187769_11095457	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300018468\|Ga0066662_10530505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300020580\|Ga0210403_10475025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300020581\|Ga0210399_10537214	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300021181\|Ga0210388_10121917	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300021401\|Ga0210393_10515916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300021401\|Ga0210393_11679888	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021403\|Ga0210397_10380102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300021432\|Ga0210384_10524175	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300021474\|Ga0210390_10672809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300021478\|Ga0210402_11068063	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300021479\|Ga0210410_11473981	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300021560\|Ga0126371_11532361	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300022518\|Ga0224548_1031416	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300025612\|Ga0208691_1069818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300025898\|Ga0207692_10192501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300025906\|Ga0207699_11192680	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025910\|Ga0207684_10515178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300026025\|Ga0208778_1010396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300026217\|Ga0209871_1067718	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300026551\|Ga0209648_10730718	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026675\|Ga0208068_100590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300027570\|Ga0208043_1079051	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300027629\|Ga0209422_1053338	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300027821\|Ga0209811_10086670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300027842\|Ga0209580_10283131	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300027853\|Ga0209274_10731145	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300027867\|Ga0209167_10122088	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300027869\|Ga0209579_10189173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300027882\|Ga0209590_10260798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300027903\|Ga0209488_10863943	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300027905\|Ga0209415_10099376	All Organisms → cellular organisms → Bacteria	3205	Open in IMG/M
3300028800\|Ga0265338_10497347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300029943\|Ga0311340_10869928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300030399\|Ga0311353_11670830	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300030509\|Ga0302183_10357285	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300030659\|Ga0316363_10052007	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300031090\|Ga0265760_10308599	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031231\|Ga0170824_114272173	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031233\|Ga0302307_10422838	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031715\|Ga0307476_10602438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300031753\|Ga0307477_10457793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300031823\|Ga0307478_10266025	Not Available	1396	Open in IMG/M
3300031833\|Ga0310917_10308596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300031946\|Ga0310910_11071926	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031962\|Ga0307479_11657558	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300032076\|Ga0306924_11537958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300032160\|Ga0311301_12277438	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300032828\|Ga0335080_11232649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300032828\|Ga0335080_11611406	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032895\|Ga0335074_10208366	Not Available	2369	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	5.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Aquatic	Environmental → Aquatic	12.38%
Plants	Host-Associated → Plants	5.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.14%
Freshwater	Environmental → Aquatic → Freshwater	9.52%
Peat	Environmental → Terrestrial → Peat	4.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Sediment	Environmental → Aquatic → Sediment	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.48%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026675	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN344 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10584191	3300000579	Forest Soil	MTQDSGKPSSRPPATLEREESQLWRWLLGFMLLLAVALTALLWERLDSIPYSLRAIPIGVLVLSVLFAVYAAGRRREVSELKVVLKGLQEHVG
JGIcombinedJ51221_104429802	3300003505	Forest Soil	MTTDPLNPSPAPHPPGNLEQEESQLWRWVLLFLVFLAVALAALLWERLEGIPYALRAIPIGVLILSI
Ga0066869_100630391	3300005165	Soil	MTPDPVNTSNTPRVPGNLEQEESQLWRWALGFMVLLSVALAGLLWERLENIPFQLRAIPIGIVFLSILFAAYAY
Ga0066690_102381421	3300005177	Soil	MTSDPDRPTRPSRTPGNLEREESQLWRWVLSFLILLAVALTGLLWERLENIPYQLRAIPVGILVLSILFAVYAYGRRREVAD
Ga0066690_107900471	3300005177	Soil	MSPDRNPTSQRSPGHLEEQESQLWRWTLLFMILLAVALAGLMWERLETVPFHLRAIPLGVLALSVLFAVYAFGRRREVSELKDALRGLQEHVG
Ga0066687_108927331	3300005454	Soil	MSPDRNPTSQRSPGHLEEQESQLWRWTLLFMILLAVALAGLMWERLETVPFHLRAIPLGVLALSVLFAVYAFGRRREVS
Ga0073909_101170622	3300005526	Surface Soil	MTADLSQTPRTPREPGTLEKEESQLWRWILGFMLLLAVALTVLLWERLDTIPYQLRAIPIGVLVLSILFAVYAYGRRQE
Ga0073909_104250631	3300005526	Surface Soil	MSVEFDSSPPPSKPAGNLDQEESQLWRWALLFMIFLAAALAALLWERLENIPFQLRAIPIGVLALSVLFAIYA
Ga0070731_102967692	3300005538	Surface Soil	MKSDRNDAARRSQGTLEQEESQLWRWVLGFMLLLAVALTALMWERLEAIPYQLRAIPIGVLLLSVLFAVYAAGRRREVTELKG
Ga0070732_103522801	3300005542	Surface Soil	MTPDPSHSSSKAQPTGSLEREESQLWRWLLGFMVLLSVALAALLWERLENIPFSLRAIPIGVLALSVLFAVYAYGRRRE
Ga0070732_104155631	3300005542	Surface Soil	MSLDPGKPSRTPRPPDNLDREESQLWRWALGFMILLAVALSGLLWERLENIPFQLRAIPVGVLALSVLFAVYAYGRRREVNELKGLLHGLQ
Ga0066654_108678261	3300005587	Soil	MTPDPLSGSRSPGSSGNLEREESQLWRWVLWFFVFMAVALAALLWERLDTIPYQLRAIPIGVLFLAILFAVYASGRRREVT
Ga0070761_103511641	3300005591	Soil	MNSDPASPRPRPPGNLDREESQLWRWVLGFMLLLAVALTGLLWERLESIPYQLRAIPIGVLALSVLFAVYAMGRRREVGDLKT
Ga0070762_102551891	3300005602	Soil	MSLDFDSPPRAPRPTANFDKEESQLWRWALLFMILLASALAALMWERLENIPFQLRAIPIGILVLSILFAV
Ga0066903_1010210401	3300005764	Tropical Forest Soil	MSTDPGLPRRPNHPGGNLDREESQLWRWILGFMVLLAVALSVVLWERLETIPYQLRAIPIGVLALSILFAVYAYGRRREVSELKGLLRGL
Ga0066903_1089603402	3300005764	Tropical Forest Soil	MSLDFDTPPKAPRPPANLDREESQLWRWAPLFMILLAAALAALLWERLENIPFQLRAIPIGVLVLSILFAVYAYGRRREVHELKGLL
Ga0066789_103556982	3300005994	Soil	MTPDPVNSSRSPRPPGHLEREESQLWRWLLLFMVLLSVALAGLLWERLESIPYSLRAIPIGVLALSL
Ga0075030_1006990661	3300006162	Watersheds	MTHDPDHSSRKAEPPRSLEREESQLWRWTLLFMILLAAALAALLWERLDNIPFQLRAIPIGVLALS
Ga0075014_1004890562	3300006174	Watersheds	MSLDPVNTSRSPRPPDNLAREESQLWRWILGFMLLLAVALTALLWERLETIPYQLRAIPLGVLVLSVLLAVYAAGRRR*
Ga0068871_1020968821	3300006358	Miscanthus Rhizosphere	MSPDPVNTSNPPRVPGNLDQEESQLWRWALGFMVLLSVALAALLWERLENIPFQLRAIPIGIVFLSILFAAYAYGRR
Ga0073928_112083571	3300006893	Iron-Sulfur Acid Spring	MSLDPTNTPRRPRPSDHLEREESQLWRWALGFMVLLAFALSGLLWERLESIPFQLRAIPIGVLVLSILFAVYAYGR
Ga0075436_1015430511	3300006914	Populus Rhizosphere	MTPDLNNAPQAPRPTGNLDQEESQLWRWALGFMILLAVALAALLWERLENIPYHLRLIPLGLLFLSVLFAVYAAGRRREVNELKGALRGLQE
Ga0105241_113843031	3300009174	Corn Rhizosphere	MSPDRNPTSQRPPGHLEQQESQLWRWTLLFMILLAVALAGLMWERLETVPFHLRAIPLGVLALSILFAAYAFGRR
Ga0116108_12408091	3300009519	Peatland	MIPDQTGGSPDSHPEGILEQEESRLWRWVLGFFILLAFALAALLWERLESIPYQLRAIPIGVLALSILFAVYAYGRRREV
Ga0116225_13273522	3300009524	Peatlands Soil	MSLDPSDDSRPNPSPGGLEREESQLWRWVLGLMILLAVALAGLLWERLENIPYSLRAIPIGVLVLSILFAVYAYGRRQEVGNL
Ga0116125_11904021	3300009628	Peatland	MKNRLPDNRPPDKLDTEESQLWRWALLFMVLMAVALSGLLWERLENIPYSLRAIPVGILVLSILFAVYAYGRRREVSELKTLLHGLQEH
Ga0116216_104604091	3300009698	Peatlands Soil	MTPPDPRPPDKLDREESQLWRWALLFMVLLAVALSGLLWERLENIPYSLRAIPIGVLVLSILFAVYAYGRRREVTELKTLLHG
Ga0126374_114112631	3300009792	Tropical Forest Soil	MSTDPGLPRRPNNPGGNFDREESQLWRWILGFMVLLAVALTVLLWERLETIPYQLRAIPIGVLALSILFAVYAHG
Ga0116223_100912102	3300009839	Peatlands Soil	MIPDQTGGSPDSHPEGILEQEESQLWRWVLGFFILLAFALAALLWERLENIPFSLRAIPIGVLALSILFAVYAYGRR
Ga0126373_102170201	3300010048	Tropical Forest Soil	MDLDPNNPRKPSPGNLDREESQLWRWLLGFMLLLAFALTGLLWERLERIPYSLRAAIPIGILVLSVLFAVYAAGRRREVGE
Ga0126373_107262691	3300010048	Tropical Forest Soil	MTTDSPQPPRTSREPGSLENEESQLWRWILGFMLLLAVALTGLLWERLEAIPYQLRAIPIGVLALSM
Ga0074044_108437461	3300010343	Bog Forest Soil	MKTGLPDNRPPDKLDKEESQLWRWALLFMVLMAVALSGLLWERLENIPYSLRAIPVGILALSILFAVYAYGRRREVT
Ga0126378_119942881	3300010361	Tropical Forest Soil	MSLDFDTPPKAPRPPANLDQEESQLWRWALLFMILLATALAALLWERLENIPFQLRAIPIGVLVLSILFAVYAYGR
Ga0136449_1025131841	3300010379	Peatlands Soil	MSPDFDSSPTPRPPGNLDREESQLWRWLLGFMLLLAVALTALLWERLDAIPYQLRAIPIGVLALSLLFAVYAAGRRREVGELKGLLRGLQEH
Ga0126361_102627761	3300010876	Boreal Forest Soil	MSLDRPNPSRTSRGPDNLEREESQLWRWALGFMLVLAVALSGLLWERLENIPFQLRAIPIGVLILSVLFTVYAYGRRRQVSELK
Ga0137380_110365832	3300012206	Vadose Zone Soil	MTPDRMNNPPTPRVPGNLEQEESQLWRWALGFMVLLSVALAGLLWERLENIPFQLRAIPIGIVFLSILFAVYAYGRRREVSELK
Ga0137416_122505601	3300012927	Vadose Zone Soil	MTPNNPRSPAPPRPPGNLEREESQLWRWSLGFLILLAVALAGLLWERLEGIPFQLRAIPIGVLALSILFVAYAY
Ga0164298_102594751	3300012955	Soil	MSPDRNPTSQRSPGHLEQQESQLWRWTLLFMILLAVALAGLMWERLETVPFHLRAIPLGVLALSILFAAYAFGRRREV
Ga0164309_119491822	3300012984	Soil	MTPDPVNTSNTPRVPGNLEQEESQLWRWVLGFMVLLSVALVGLLWECLENILFQLRAIPIGIVFLSILFAAYVYGRRREVSELKGLLRGL
Ga0181534_107528831	3300014168	Bog	MNSDPASSRTPRPGNLDREESQLWRWVLGFMLLLAVALTGLLWERLESIPYQLRAIPIGVLALSVLFAVYAMGRRREV
Ga0132257_1009427491	3300015373	Arabidopsis Rhizosphere	MSVEFDSSPPPSKPAGNLDQEESQLWRWALLFMIFLAAALAALLWERLENIPFQLRAIPIGVLALSVLFAI
Ga0132257_1035310501	3300015373	Arabidopsis Rhizosphere	MAPDLNSAPGRPPGNLEREESQLWRWTLLFMIFLAVALAAVMWERLEAIPFHLRAIPLGVLILSILFAVYAYGRRREVS
Ga0182032_110075961	3300016357	Soil	MSTAPGLPPRPPRAPGSLDREESQLWRWAHWFTILLAFALAALLWVRLESFPFSVRAIPVGVLALSILFTIYAYGRRQE
Ga0182037_106805891	3300016404	Soil	MGIQEATTILMSSDPGLPQRPTRPAENLDREESQLWRWILGFMLLLAVALTVLLWERLDAIPYQLRAIPIGV
Ga0182039_117784121	3300016422	Soil	MSTDPGLPRRANHPAGNFDREESQLWRWILGFMLLLAVALTVLLWERLETIPFQLRAIPIGVLVLSILFAVYAYGRRREVS
Ga0187802_101525953	3300017822	Freshwater Sediment	MAQDPLSSPRKPRNPGNLEREESQLWRWLLGFMLLLAVALAGLLWERLENIPYSLRAIPIGVLALSVLFVVYAYGRRREVSELKGLLRD
Ga0187825_103000361	3300017930	Freshwater Sediment	MSSTSPNAPRAPRPPDRLEREESQLWRWALGFMILLAVALAGLLWERLENIPFSLRAIPVGILVLSILFAVYAYGRRREVSELK
Ga0187803_101761782	3300017934	Freshwater Sediment	MPTDPTAGPPDSRPEGILEQEESQLWRWVLGFLIVLAVALAGVLWERLESIPYFLRAIPIAVLALSILF
Ga0187817_106283331	3300017955	Freshwater Sediment	MSLDPTSTSNTPRPPGNLDREESQLWRWLLLFMVLLSVALAALLWERLENIPYSLRAIPIGVAALSVLFAVYAYGRRR
Ga0187779_106567372	3300017959	Tropical Peatland	MTPDPSQSPRPPRASGTLEKEESQLWRWVLGFMVLLAVALSALLWERLDSIPYQLRAIPIGVMALAILFAVYAYGRRSEVTELKTLL
Ga0187782_108069672	3300017975	Tropical Peatland	MTPDPGNGAPNPRPPGTLEKEESQLWRWLLWFMVFLAVALAGLLWERLETIPYSLRAIPIGVLVLSILFAVYAY
Ga0187782_112553432	3300017975	Tropical Peatland	MDLDPNNPSRKPSAPGNLDREESQLWRWLLGFMLLLAFALTGLLWERLERIPYSLRAIPIGVLVLSVLFAVYAAGRRREVGELKDALRGLQ
Ga0187823_103232951	3300017993	Freshwater Sediment	MSMDPGNTSRTPRPPDHLEREESRLWRWALGFMVLLAVALAGLLWERLENIPFQLRAIPIGVLVLSILFAVYAYGRRRE
Ga0187816_101306032	3300017995	Freshwater Sediment	MIPDPTGGSTDPQPEGSLEREESQLWRWVLGFLILLAFALAALLWERLENIPFSLRAIPI
Ga0187769_110954571	3300018086	Tropical Peatland	MTPDPTDGPTEPRPEGILEQEESQLWRWVLWFLMLLAFALAALMWERLDNIPYSLRAIPVGVLALSVLFAIYAYGRRREVAELKS
Ga0066662_105305052	3300018468	Grasslands Soil	MTSDFNNASQSSRPPGRLEREESQLWRWTLLFMVLLAVALAALMWERLDGIPFHLRAIPIGVLALSVLFAFYAYGRRREVG
Ga0210403_104750251	3300020580	Soil	MTPDPVNSSRSPRPPGNLEREESQLWRWLLLFMVLLAVALAALLWERLENIPYSLRAIPIGVLVLSILF
Ga0210399_105372141	3300020581	Soil	MSLDFDSPPRAPRPTANFDKEESQLWRWALLFMILLASALAALMWERLENIPFQLRAIPIGILVLSILFAVYAYGRR
Ga0210388_101219172	3300021181	Soil	MTPDPVNSSRTSRPPGNLEREESQLWRWALGFMILLSVALAGLLWERMENIPFYLRAIPIAILFLSLFFAVYAYGRRREVSELKGL
Ga0210393_105159162	3300021401	Soil	MTMDPSQPRRPPRSSGNFDQEESQLWRWALLFMIFLAVALAALLWERLENIPYQLRAIPIGVLALSVLFAIYAYGRRREV
Ga0210393_116798881	3300021401	Soil	MMQDPLNSPHKPRVPERFEREESQLWRWALGFMILLAVALAGLLWERLENVPFELRAIPIGVLVLSFLFAAYSFGWRR
Ga0210397_103801022	3300021403	Soil	MTQDPEIPRPTAQPGNLERQESQLWRWVLGFMVLLAFALSAMLWERLESIPYSLRAIPIGVLALSVLFAFYAFGRRREV
Ga0210384_105241751	3300021432	Soil	MMQDPLNSPHKPRVPERFEREESQLWRWALGFMILLAVALAGLLWERLENVPFELRAIPIGVLVLSFLFAAY
Ga0210390_106728091	3300021474	Soil	MTSDPVNNPQTPGTPGNLEREESQLWRWALLFMVFLSVALAAMLWERLENIPFGLRVIPIAVLSLSILFAVYAYGRRREVSELKGLLRGLQH
Ga0210402_110680631	3300021478	Soil	MSNLPQRPRANRPSGNLDKEESQLWRWVLSFFVLLAVALAGLLWERLDNIPYSLRAIPFGILALAILFAVYAWGRKREVTDLKILL
Ga0210410_114739811	3300021479	Soil	MKTDRSENRGTRPPDRLEREESQLWRWALWFMVLLAFALSALLWERLENIPYHLRLIPFVVLALSILFAV
Ga0126371_115323612	3300021560	Tropical Forest Soil	MSLDFDTPPKSPRQPGNLDQEESQLWRWILLFMILLASALAALLWERLENIPYQLRAIPIGVLVLSILFAVYAYGRR
Ga0224548_10314161	3300022518	Soil	MIKIGSSFMSLGPSNPPRSSRPPDNLEREESQLWRWALGFMILLAFALSGLLWERLENIPYSLRAIPIGILGL
Ga0208691_10698182	3300025612	Peatland	MTLDPVNNKPKSGTPGNLEREESQLWRWALWFMVFLSVALAALLWERLENIPFGLRAIPIGVLALSILFAVYAYGRR
Ga0207692_101925011	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTPDPVNTSNKPRVPGNLEQEESQLWRWALGFMVLLSVALAGLLWERLENIPFQLRAIPIGIVFLSILFAAYAYGRRREVSELKGLLRGL
Ga0207699_111926801	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDPALPSRPNPPGNLDREESQLWRWVLLFMVFLSVALVALLWERLEGVPFQLRAIPVGVLALSILFVAYAYGRRREVNELKGLLRGL
Ga0207684_105151782	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDQPARPSRTPSNLEREESQLWRWVLGFLILLAVALTSLLWERLENIPYQLRAIPIGILVLSILFAVYAYGRRREVADLKQLLQGLQE
Ga0208778_10103962	3300026025	Rice Paddy Soil	MAPNLNSAPGRPPGNLEREESQLWRWTLLFMIFLAVALAAVMWERLEAIPFHLRAIPLGVLILSILFAVYAYGRRR
Ga0209871_10677182	3300026217	Permafrost Soil	MTPDPVNSSRSPRPPGHLEREESQLWRWLLLFMVLLSVALAGLLWERLESIPYSLRAIPIGVLALSLLFAVYA
Ga0209648_107307181	3300026551	Grasslands Soil	MSSDQPVRPSRTPGNLEREESQLWRWVLGFLILLAVALTGLLWERLENIPYQLRAIPIGILVLSILFAVYAYGRRREVADLKQLLQGLQEHV
Ga0208068_1005901	3300026675	Soil	MSTDPGLPRRPNHSAGNFDREESQLWRWILGFMLLLAVALTVLLWERLETIPYQLRAIPIGV
Ga0208043_10790511	3300027570	Peatlands Soil	MPLDPRKFSHSPRPPGNLEREESQLWRWVLGFMLLLAVALTALLWERLEAIPYQLRAIPIGVLALSVLFAVYAAGRRREV
Ga0209422_10533381	3300027629	Forest Soil	MMQDPLNSPHKSRVPERFEQEESQLWRWALGFMILLAVALAGLLWERLQNVPFELRAIPIGVLTLSFLFAAYAYG
Ga0209811_100866702	3300027821	Surface Soil	MTADLSQTPRTPREPGTLEKEESQLWRWILGFMLLLAVALTVLLWERLDTIPYQLRAIPIGVLVLSILFAVYAYGRRQEVSELKGLLRG
Ga0209580_102831311	3300027842	Surface Soil	MSLDPGKPSRTPRPPDNLDREESQLWRWALGFMILLAVALSGLLWERLENIPFQLRAIPVGVLALSVLFAVYAYGRRREVNELK
Ga0209274_107311451	3300027853	Soil	MDPSSSARPPRSSGNFDKEESQLWRWALLFMIFLAVALAALLWERLENIPYQLRAIPIGVLALSILFAI
Ga0209167_101220882	3300027867	Surface Soil	MSPDSNQSPRSSPPKGSLDREESQLWRYTLWFMIFLAFALAVLLWERLESIPYSLRAIPIGVLTLSVLFAIYAYGRRREVSELKGLLRG
Ga0209579_101891731	3300027869	Surface Soil	MKSDRNDASSRSQGTLEQEESQLWRWVLGFMLLLAVALTALMWERLETIPYQLRAIPIGVLVLSVLFAVYAAGRRREVTELKG
Ga0209590_102607981	3300027882	Vadose Zone Soil	MSPDPVNTSHTSRPPGNLDREESQLWRWALGFMLLLSFALAGLLWERLENIPFQLRAIPIGIVFLSILFAVYAYGRRRE
Ga0209488_108639431	3300027903	Vadose Zone Soil	MTPNNPHSPAPPRPPGNLEREESQLWRWSLGFLILLAVALAGLLWERLEGIPFQLRAIPIGVLALSILFVAYAYGRRREVADLKTVLQG
Ga0209415_100993761	3300027905	Peatlands Soil	MSLDPVNTSNSPRPPGNLEREESQLWRWLLLFMVLLSVALAALLWERLENIPYSLRAIPIGVAALSVLFAVYAYGRRREVSELKGLL
Ga0265338_104973471	3300028800	Rhizosphere	MCPDPAKPGRNPSTPGNLEREESQLWRFVLGFLILLSVALAALLWERLENIPYQLRAIPIGVLVLSILFAAYAYGRRREV
Ga0311340_108699282	3300029943	Palsa	MKTRLPDNRPPDKLDKEESQLWRWALLFMVLMAVALSGLLWERLENIPYSLRAIPVGILALSILFAVYAYG
Ga0311353_116708301	3300030399	Palsa	MASKSHPSTDPSRAPSSFEREESQLWRWALGFLILLAFALAGLLWERLQGIPYELRAIPIGVLALSLLFAVYAYGRRRE
Ga0302183_103572851	3300030509	Palsa	MASKSHPSTDPSRAPSSFEREESQLWRWTLGFLILLAFALAGLLWERLQGIPYELRAIPIGVLALSLLFAVYAYGRRRE
Ga0316363_100520072	3300030659	Peatlands Soil	MIPDQTGGSPDSHPEGILEQEESQLWRWVLGFFILLAFALAALLWERLENIPFSLRAIPIGVLALSILFAVYAYGRRREVSELKG
Ga0265760_103085991	3300031090	Soil	MIPNSRLPSGPPRPPSSFEREESQLWRWALGFLILLAVALAGLLWERLSGIPYELRAIPMGVLALSLLFAVYAYGRRREVTDLKL
Ga0170824_1142721731	3300031231	Forest Soil	MTPDPVNSSRSPRPSGNLEREESKLWRWLLLFMVFLSVALAALLWERLETIPYSLRAIPIGVLALSLLFAVYAYGRRR
Ga0302307_104228381	3300031233	Palsa	MKTRLPDNRPPDKLDKEESQLWRWALLFMVLMAVALSGLLWERLENIPYSLRAIPVGILALSILFAVYAYGR
Ga0307476_106024382	3300031715	Hardwood Forest Soil	MTPDPLNSSRTSRPPGNLEREESQLWRWALGFMILLSVALAGVLWERMENIPFYLRAIPIAILFLSLFFAVYAYGRRREVSELK
Ga0307477_104577931	3300031753	Hardwood Forest Soil	MGLQEKSLFLMSPDPVLPPRPNPPGSLDQEESQLWRWVLLFMVFLSVALVALLWERLEGIPFQLRAIPVGVLALSILFAAYAYGRRREVNE
Ga0307478_102660251	3300031823	Hardwood Forest Soil	MTTDPLNPSPAPRPPGNLEQEESQLWRWVLLFLVFLAVALAALLWERLEGIPYALRAIPIGVLILSILFAVYAYGR
Ga0310917_103085962	3300031833	Soil	MSQDPVSPTQPPRPSGSLEREESQLWRWALLFMIFLAVALAALLWERLEGIPYSLRAIPIGVMALSILFAVYAYGRRREVSELKGL
Ga0310910_110719261	3300031946	Soil	MGIQEATTILMSSDPGLPQRPTRPAENLDREESQLWRWILGFMLLLAVALTVLLWERLDAIPYQLRAIPIGVLVLSILFAVYAYGRRQEVSEL
Ga0307479_116575581	3300031962	Hardwood Forest Soil	MKPDRNDAARNPRPQGTLEQEESQLWRWVLGFMLLLAVALTALMWERLETIPYQLRAIPLGVLVLSVLFAVYAAGRRREVTELKG
Ga0306924_115379582	3300032076	Soil	MSQDPVSPTQPPRPSGSLEREESQLWRWALLFMIFLAVALAALLWERLEGIPYSLRAIPIGVMALSILFA
Ga0311301_122774382	3300032160	Peatlands Soil	MSPDPSESSRTPRPPGNLDREESQLWRWALLFMVFLAVALTALLWERLENIPFNLRVIPFGVLVLIVLFAAYAWGR
Ga0335080_112326492	3300032828	Soil	MTQDPGKPSSPRPPATLEREESQLWRWLLAFMLLLAFALTALLWERLEAIPYALRAIPIGVLVLSVLFAVYAAGR
Ga0335080_116114061	3300032828	Soil	MTPDSVNSSRTPRPPGNLEREESQLWRWVLWFLVFLAVAVSALLWERLENIPYFLRAIPVGLLALSILFAVYASGRRREVGELKGLL
Ga0335074_102083661	3300032895	Soil	MAQDPLSPPGKPHAPGNLEREESQLWRWTLWFMVLLAVALAGLLWERLENIPYQLRAIPIGVLALSVLFAIYAQGRRRE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095896

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign