Metagenome / Metatranscriptome Family F095831

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095831
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	44 residues
Representative Sequence	MLKLRPAIRYGIDALLILVPLLGMTYFLFDPEAFNAFLAWLARVL
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.95 %
% of genes near scaffold ends (potentially truncated)	32.38 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.238 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.05% β-sheet: 0.00% Coil/Unstructured: 47.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02811	PHP	5.71
PF12276	DUF3617	3.81
PF00005	ABC_tran	3.81
PF07733	DNA_pol3_alpha	1.90
PF02687	FtsX	0.95
PF04454	Linocin_M18	0.95
PF03459	TOBE	0.95
PF13669	Glyoxalase_4	0.95
PF06186	DUF992	0.95
PF02586	SRAP	0.95
PF01068	DNA_ligase_A_M	0.95
PF12096	DUF3572	0.95
PF12762	DDE_Tnp_IS1595	0.95
PF00144	Beta-lactamase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	1.90
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	1.90
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
All Organisms	root	All Organisms	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
cellular organisms	root	All Organisms → cellular organisms	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.52 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.95 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.81 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.95 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3.81 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.95 %
Actinomyces dentalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → Actinomyces dentalis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3.81 %
Microcystis aeruginosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	0.95 %
Actinomyces dentalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → Actinomyces dentalis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3.81 %
Microcystis aeruginosa Ma_OC_H_19870700_S124	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa → Microcystis aeruginosa Ma_OC_H_19870700_S124	0.95 %
Actinomyces dentalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → Actinomyces dentalis	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100120041	All Organisms → cellular organisms → Bacteria → Proteobacteria	2475	Open in IMG/M
3300003505\|JGIcombinedJ51221_10471195	Not Available	507	Open in IMG/M
3300004092\|Ga0062389_100339049	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300004092\|Ga0062389_101261035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	925	Open in IMG/M
3300005332\|Ga0066388_101969428	Not Available	1046	Open in IMG/M
3300005537\|Ga0070730_11074980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → Actinomyces dentalis	500	Open in IMG/M
3300005764\|Ga0066903_100143572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3404	Open in IMG/M
3300005764\|Ga0066903_102482793	Not Available	1003	Open in IMG/M
3300005764\|Ga0066903_102627701	Not Available	976	Open in IMG/M
3300005764\|Ga0066903_106511249	Not Available	608	Open in IMG/M
3300006175\|Ga0070712_101744766	Not Available	545	Open in IMG/M
3300006176\|Ga0070765_101639179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300006845\|Ga0075421_102438925	Not Available	546	Open in IMG/M
3300006893\|Ga0073928_10014555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8680	Open in IMG/M
3300006893\|Ga0073928_10165270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1770	Open in IMG/M
3300009100\|Ga0075418_12308988	Not Available	587	Open in IMG/M
3300009520\|Ga0116214_1134272	Not Available	918	Open in IMG/M
3300009525\|Ga0116220_10576005	Not Available	516	Open in IMG/M
3300009553\|Ga0105249_10176674	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300009764\|Ga0116134_1060293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1429	Open in IMG/M
3300010360\|Ga0126372_12826710	Not Available	537	Open in IMG/M
3300010360\|Ga0126372_13238748	Not Available	506	Open in IMG/M
3300010360\|Ga0126372_13253429	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010376\|Ga0126381_101509346	Not Available	971	Open in IMG/M
3300010376\|Ga0126381_102590210	Not Available	726	Open in IMG/M
3300010376\|Ga0126381_103386145	Not Available	628	Open in IMG/M
3300010376\|Ga0126381_104756150	Not Available	522	Open in IMG/M
3300010379\|Ga0136449_101606855	Not Available	987	Open in IMG/M
3300010379\|Ga0136449_101702223	Not Available	950	Open in IMG/M
3300010396\|Ga0134126_10689874	Not Available	1161	Open in IMG/M
3300010398\|Ga0126383_10199229	Not Available	1921	Open in IMG/M
3300010398\|Ga0126383_12179597	Not Available	641	Open in IMG/M
3300010398\|Ga0126383_12948660	Not Available	556	Open in IMG/M
3300012180\|Ga0153974_1077489	Not Available	742	Open in IMG/M
3300012957\|Ga0164303_10295019	Not Available	953	Open in IMG/M
3300012971\|Ga0126369_12058667	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012980\|Ga0168315_119824	Not Available	620	Open in IMG/M
3300012989\|Ga0164305_10040572	All Organisms → cellular organisms → Bacteria → Proteobacteria	2643	Open in IMG/M
3300013296\|Ga0157374_12646685	Not Available	529	Open in IMG/M
3300014201\|Ga0181537_10570299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	773	Open in IMG/M
3300015371\|Ga0132258_11638881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1623	Open in IMG/M
3300016270\|Ga0182036_10624688	Not Available	866	Open in IMG/M
3300016294\|Ga0182041_11172629	Not Available	700	Open in IMG/M
3300016341\|Ga0182035_10512857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1025	Open in IMG/M
3300016404\|Ga0182037_12120911	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300016422\|Ga0182039_10552194	Not Available	1001	Open in IMG/M
3300017943\|Ga0187819_10107359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1667	Open in IMG/M
3300017961\|Ga0187778_11107899	Not Available	552	Open in IMG/M
3300017970\|Ga0187783_10044488	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300017970\|Ga0187783_10060129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2803	Open in IMG/M
3300017970\|Ga0187783_10598923	Not Available	797	Open in IMG/M
3300017970\|Ga0187783_10617090	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300017972\|Ga0187781_10119340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa → Microcystis aeruginosa Ma_OC_H_19870700_S124	1838	Open in IMG/M
3300017972\|Ga0187781_10273855	Not Available	1196	Open in IMG/M
3300017972\|Ga0187781_10857666	Not Available	660	Open in IMG/M
3300017975\|Ga0187782_10027608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4132	Open in IMG/M
3300017975\|Ga0187782_11138103	Not Available	610	Open in IMG/M
3300017975\|Ga0187782_11276637	Not Available	576	Open in IMG/M
3300018001\|Ga0187815_10106028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1186	Open in IMG/M
3300018044\|Ga0187890_10790075	Not Available	537	Open in IMG/M
3300018062\|Ga0187784_10250056	Not Available	1443	Open in IMG/M
3300020579\|Ga0210407_10136136	Not Available	1887	Open in IMG/M
3300020582\|Ga0210395_10164275	Not Available	1660	Open in IMG/M
3300020582\|Ga0210395_11087296	Not Available	590	Open in IMG/M
3300021168\|Ga0210406_10576890	Not Available	881	Open in IMG/M
3300021171\|Ga0210405_10406512	Not Available	1072	Open in IMG/M
3300021171\|Ga0210405_11135906	Not Available	582	Open in IMG/M
3300021180\|Ga0210396_11560447	Not Available	541	Open in IMG/M
3300021405\|Ga0210387_10961713	Not Available	749	Open in IMG/M
3300021477\|Ga0210398_10019102	All Organisms → cellular organisms → Bacteria	5873	Open in IMG/M
3300021477\|Ga0210398_11261169	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021560\|Ga0126371_12379840	Not Available	640	Open in IMG/M
3300022557\|Ga0212123_10434819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	869	Open in IMG/M
3300022557\|Ga0212123_10445612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	855	Open in IMG/M
3300025320\|Ga0209171_10415410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	686	Open in IMG/M
3300025939\|Ga0207665_10995870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M
3300027684\|Ga0209626_1138538	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027895\|Ga0209624_11004434	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300027908\|Ga0209006_10033767	All Organisms → cellular organisms → Bacteria	4632	Open in IMG/M
3300027908\|Ga0209006_10059693	All Organisms → cellular organisms → Bacteria	3413	Open in IMG/M
3300027915\|Ga0209069_10803724	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300029636\|Ga0222749_10157699	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300030707\|Ga0310038_10031237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3177	Open in IMG/M
3300031090\|Ga0265760_10052013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300031090\|Ga0265760_10365352	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031573\|Ga0310915_10251056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1245	Open in IMG/M
3300031573\|Ga0310915_10417898	Not Available	953	Open in IMG/M
3300031715\|Ga0307476_10996897	Not Available	617	Open in IMG/M
3300031744\|Ga0306918_10215243	Not Available	1454	Open in IMG/M
3300031910\|Ga0306923_11358000	Not Available	751	Open in IMG/M
3300031912\|Ga0306921_11052434	Not Available	915	Open in IMG/M
3300031912\|Ga0306921_11379984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	776	Open in IMG/M
3300031912\|Ga0306921_11462273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	749	Open in IMG/M
3300031941\|Ga0310912_10864749	Not Available	697	Open in IMG/M
3300031954\|Ga0306926_12091103	Not Available	634	Open in IMG/M
3300032001\|Ga0306922_12154552	Not Available	539	Open in IMG/M
3300032076\|Ga0306924_11438959	Not Available	734	Open in IMG/M
3300032076\|Ga0306924_11723970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300032160\|Ga0311301_10008034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34992	Open in IMG/M
3300032261\|Ga0306920_100739977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1447	Open in IMG/M
3300032261\|Ga0306920_101165872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1115	Open in IMG/M
3300032515\|Ga0348332_11980149	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300032805\|Ga0335078_11846580	Not Available	655	Open in IMG/M
3300032892\|Ga0335081_10199694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2770	Open in IMG/M
3300033402\|Ga0326728_10000046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	477730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	5.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Aquatic	Environmental → Aquatic	12.38%
Plants	Host-Associated → Plants	4.76%
Fungi	Host-Associated → Fungi	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.05%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Sediment	Environmental → Aquatic → Sediment	0.95%
Peat	Environmental → Terrestrial → Peat	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%
Geologic	Environmental → Terrestrial → Geologic	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%
Mycelium	Host-Associated → Fungi → Mycelium	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%
Mine	Environmental → Terrestrial → Geologic → Mine	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.43%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012980	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCW15	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001200416	3300002245	Forest Soil	MPAVRTIVRYAIDALLIFAPLSGMMYFLFNPDAFNAFLAWLVGVL*
JGIcombinedJ51221_104711951	3300003505	Forest Soil	MPKIPPAVRYTLDALLIVVPLILMTYFLFDPAAFNAFTAWLARVL*
Ga0062389_1003390492	3300004092	Bog Forest Soil	MPAPRTIVKYAIDVLLIFAPLSGVMYFLFDPDAFNVFLAWLVRVL*
Ga0062389_1012610353	3300004092	Bog Forest Soil	MPAARTIVRYAIDALLIFAPLSGVMYFLFNPDAFNAFLAWLVGVL*
Ga0066388_1019694282	3300005332	Tropical Forest Soil	VDIGVKVMPTAIKHSVDILLIAVPLFVMTYFLFNPAAFNAFTDWLARTL*
Ga0070730_110749801	3300005537	Surface Soil	MLKLRPAIRYGIDALLILVPLLGMMYFLFDPEAFNAFLAWLARVL*
Ga0066903_1001435723	3300005764	Tropical Forest Soil	MPKLRPAIRYGIDAVLILAPLLGMTYLLFNPAAFNAWLAWLARML*
Ga0066903_1024827932	3300005764	Tropical Forest Soil	MTAAVRYTLDTLLIMVPLIVMTYFVFDPAAFNVFTGWLARVL*
Ga0066903_1026277012	3300005764	Tropical Forest Soil	MTAAVRYTLDTLLVIVPLTVMTYFLFDPSAFNAFTAWLIRVL*
Ga0066903_1065112492	3300005764	Tropical Forest Soil	VRYTLDTLLIMVPLTVMTFFLFDPAAFNLFTGWLARVL*
Ga0070712_1017447661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GAMAKGWKAVRYGVDALLILVPLSGMTYFLFYPDAFNAVLAWLAHVL*
Ga0070765_1016391792	3300006176	Soil	MLRPAFKYGIDAILILVPLGGMTYFLFDPDAFNAFL
Ga0075421_1024389252	3300006845	Populus Rhizosphere	MAKGWKAVRYGVDALLILVPLSGMTYFLFYPDAFNAVLAWLAHVL*
Ga0073928_100145555	3300006893	Iron-Sulfur Acid Spring	MPAARTIVKYTIDVLLIFVPLAGVIYFLFEPDAFNAFLAWLVRVL*
Ga0073928_101652704	3300006893	Iron-Sulfur Acid Spring	MPAVRTIAKYAIDALLIFAPLSGVMYFLFNPDAFNAFLAWLVGVL*
Ga0075418_123089882	3300009100	Populus Rhizosphere	MAKLPPAARYTLDALLIVVPLIVMTYFLFDPAAFNAFTAWLARVL*
Ga0116214_11342722	3300009520	Peatlands Soil	MPPVRTMVKYAIDALLIFAPLCGVMYFLFNPDAFNAFLAWLARVL*
Ga0116220_105760051	3300009525	Peatlands Soil	TMVKYAIDALLIFAPLCGVMYFLFDPDAFNAFLAWLARVL*
Ga0105249_101766746	3300009553	Switchgrass Rhizosphere	GLFIRRPLSPMAKLPPAARYTLDALLIVVPLIVMTYFLFDPAAFNAFTAWLARVL*
Ga0116134_10602932	3300009764	Peatland	MPPRQIIKYAIDIVLVVAPLSGILYFLFDPDAFNAFLDWIVRAL*
Ga0126372_128267101	3300010360	Tropical Forest Soil	IKYGIDALLVAVPLLGMTYFLFDPEAFNAFTAWLVRVL*
Ga0126372_132387481	3300010360	Tropical Forest Soil	TAAVRYTLDTLLIMVPLIVMTYFVFDPAAFNVFTGWLARVL*
Ga0126372_132534291	3300010360	Tropical Forest Soil	MMPAAVKHTVDILLVAVPLFVMTYFLFNPAAFNAFTAWLARTL*
Ga0126381_1015093461	3300010376	Tropical Forest Soil	MTAVVRYTLDTLLIMVPLTVMTFFLFDPAAFNLFTGWLASVL*
Ga0126381_1025902101	3300010376	Tropical Forest Soil	LRPAIKYGIDTLLVAVPLFGMTYFLFDPEAFNAVTAWLVRVL*
Ga0126381_1033861452	3300010376	Tropical Forest Soil	MTAAVRYALDTLLVVVPLIVMTYFLFDPAAFNLFTGWLARVL*
Ga0126381_1047561502	3300010376	Tropical Forest Soil	MPKIPPAVRYTLDALLIAVPLILMTYFLFDPAAFNAFTAWLARVL*
Ga0136449_1016068552	3300010379	Peatlands Soil	MPPARTMVKYAIDALLIFAPLCGVMYFLFNPDAFNAFLAWLARVL*
Ga0136449_1017022231	3300010379	Peatlands Soil	MLKLRPAIRYGIDALLILVPLLGMTYFLFDPEAFNAFLAWLARVL*
Ga0134126_106898741	3300010396	Terrestrial Soil	MAKGWKAVRYGVDALLILVPLSGMTYFLFYLDAFNAVLARLAHVL*
Ga0126383_101992294	3300010398	Tropical Forest Soil	MPKMRPAIRYGIDALLILIPLLVMTYFLFYPEAFNACLAWLATVL*
Ga0126383_121795971	3300010398	Tropical Forest Soil	KLRPAIKYGIDTLLVAVPLLGMTYFLFDPEAFNAFTAWLMRVV*
Ga0126383_129486601	3300010398	Tropical Forest Soil	IDALLIVVPLFGMTYFLFDPEAFNGVTAWLCRVL*
Ga0153974_10774892	3300012180	Attine Ant Fungus Gardens	MPKVRTAVRYGIEALLILVPLSGMTYFLFDPDAFNAFLAWLAKVL*
Ga0164303_102950191	3300012957	Soil	MQKMPPAIRYGIDALLILVPLDAMTYFLSDPAAFNAFAAWLARVL*
Ga0126369_120586671	3300012971	Tropical Forest Soil	MPAAVKHTVDILLIALPLFVMTYFLFNPAAFDAFTAWLARTL*
Ga0168315_1198241	3300012980	Weathered Mine Tailings	AAMPRLPPAIGYGIDAVLILVPLLGMTYFLFNPAAFNAFLAWLVRVL*
Ga0164305_100405726	3300012989	Soil	MPKLRLAIRYGIDALLILIPLLGMTYFLFDPEAFNAFLAWLARIL*
Ga0157374_126466851	3300013296	Miscanthus Rhizosphere	MPKLPPAIRYGIDAVLILVPLLGMTYFLFNPAAFNAFTAWLARVL*
Ga0181537_105702993	3300014201	Bog	MPARRIVKYAFDVLLIFAPLAAVIYFLFNPDAFNAFSAWLVRVL*
Ga0132258_116388811	3300015371	Arabidopsis Rhizosphere	VEVMPATVKHTVDILLIAVPLFVMTYFLFNPAAFNAFTAWLARTL*
Ga0182036_106246881	3300016270	Soil	MSPPRMIVKYTIDLLLIFVPLAAVTYFLFNPSAFNAFTAWLAHVL
Ga0182041_111726292	3300016294	Soil	MPKLRPAIRYGIDAVLILALLLGMTYFSIKPVAFNAWLAWLARML
Ga0182035_105128571	3300016341	Soil	MTAALRYTLDTLLITVPLIVMTSFLFDPAAFNLFTAWLARVV
Ga0182037_121209112	3300016404	Soil	KYGIDALLVAVPLLGMTYFLFEPEAFNAFTAWLVRVL
Ga0182039_105521942	3300016422	Soil	MPKMRPAIRYGIDALLILIPLLVMTYFLFYPEAFNACLAWLATVL
Ga0187819_101073592	3300017943	Freshwater Sediment	MPPARTIVKYAIDALLIFAPLCGVMYFLFDPDAFNAFLAWLARVL
Ga0187778_111078992	3300017961	Tropical Peatland	MAEPRKIVQHTLDAVLIFAPLSGMLYFLFDSAAFNAFLAWLLSVL
Ga0187783_100444883	3300017970	Tropical Peatland	MPEPRKVIKYTFDAALIFAPLSGMLYFLFDPAAFNAFLAWLVSVL
Ga0187783_100601291	3300017970	Tropical Peatland	TRDTLLVIVPLTVMTYFLFDPSAFNAFTAWLTRVL
Ga0187783_105989232	3300017970	Tropical Peatland	MPKGWTAVRYAIDALLILVPLSGMLYFLFDPDAFNACLRWLAQVL
Ga0187783_106170903	3300017970	Tropical Peatland	MPEPRKIMRYTLDAALIFAPLTGMLYFLFDPAAFNAFLAWLVSVL
Ga0187781_101193402	3300017972	Tropical Peatland	MAVGVRYTVDMLLVGVPLLVMTYFLFDPAAFNAFTAWLARTL
Ga0187781_102738553	3300017972	Tropical Peatland	MPKGWTAVRYAIDALLIAVPLCGMLYFLFNPDAFNACLRWLAKVL
Ga0187781_108576662	3300017972	Tropical Peatland	GDPGESGDIRGMSKLPPAVRYGIDPLLILVPLGAMTFFLFDTAAFNAFTAWLAKIL
Ga0187782_100276085	3300017975	Tropical Peatland	MPEGWTAVRYAIDALLIAVPLCGMLYFLFNPDAFNACLRWLAKVL
Ga0187782_111381032	3300017975	Tropical Peatland	MLKIRQAIKYGIDVLLILVPLCGTMYFLFNPASFNAFLAWLVEVL
Ga0187782_112766372	3300017975	Tropical Peatland	MSKLRPAIRYGIEALLILVPLCGMMYFLFNPDDFNRSLAWLMRVL
Ga0187815_101060284	3300018001	Freshwater Sediment	MPPARTIVKYAIDALLIFAPLCGVMYFLFDPDAFNAFLAWLTRVL
Ga0187890_107900752	3300018044	Peatland	MPSRQIIKYAIDIVLVVAPLAGILYFLFDPDAFNAFLDWLMR
Ga0187784_102500561	3300018062	Tropical Peatland	QSDHIWPMLKIRQAIKYGIDVLLILVPLCGTLYFLFNPASFNAFLAWLVEVL
Ga0210407_101361361	3300020579	Soil	MQKMPPAIRYGIDALLILVPLDAMTYFLSDPAAFNAFAAWLARVL
Ga0210395_101642751	3300020582	Soil	MLRPAFKYGIDAVLILVPLGGMTYFLFDPDAFNAFLDWLMRLF
Ga0210395_110872962	3300020582	Soil	RPAFKYGIDAVLILVPLGGMTYFLFDPDAFNAFLDWLMRLF
Ga0210406_105768902	3300021168	Soil	MQKMLPAIRYGIDALLILVPLDAMTYFLSDPAAFNAFAAWLARVL
Ga0210405_104065123	3300021171	Soil	MPKIPPAVRYTLDALLIVVPLILMTYFLFDPAAFNA
Ga0210405_111359062	3300021171	Soil	MSKEMRPAIRYGIEALLILIPLLVMTYFLFYPDAFNMCLAWLAKVL
Ga0210396_115604472	3300021180	Soil	PSESVDIGRTRKMPPAIRYGIDALLILVPLVVLMYFLFDPAAFNAFTAWLARVL
Ga0210387_109617132	3300021405	Soil	KMPPAIRYGIDALLILVPLDAMTYFLSDPAAFNAFAAWLARVL
Ga0210398_100191025	3300021477	Soil	MPEPRKVIRYTLDAALIFAPLSGMLYFLFDPAAFNAFLAWLVSVL
Ga0210398_112611691	3300021477	Soil	RPAIRYGIDALLILIPLLGMTYFLFDPEAFNAFLAWLARIL
Ga0126371_123798402	3300021560	Tropical Forest Soil	IGNEPVPRIGGEVMTAVVRYTLDTLLIMVPLTVMTFFLFDPAAFNLFTGWLARVL
Ga0212123_104348192	3300022557	Iron-Sulfur Acid Spring	MPAARTIVKYTIDVLVIFVPLAGVIYFLFEPDAFNAFLAWLVRVL
Ga0212123_104456122	3300022557	Iron-Sulfur Acid Spring	MPAVRTIAKYAIDALLIFAPLSGVMYFLFNPDAFNAFLAWLVGVL
Ga0209171_104154102	3300025320	Iron-Sulfur Acid Spring	MPAARTIVKYTIDVLLIFVPLAGVIYFLFEPDAFNAFLAWLVRVL
Ga0207665_109958702	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPPAIRYGIDALLILVPLDAMTYFLSDPAAFNAFAAWLAR
Ga0209626_11385381	3300027684	Forest Soil	VIKSGPLMLRPAFKYGIDAALILVPLGGMTYFVFDPDAFNAFLDWLMRLL
Ga0209624_110044342	3300027895	Forest Soil	MLKLRPAIRYGIDALLILVPLLGMTYFLFDPEAFNAFLAWLARIL
Ga0209006_100337675	3300027908	Forest Soil	MPAVRTIVRYAIDALLIFAPLSGMMYFLFNPDAFNAFLAWLVGVL
Ga0209006_100596933	3300027908	Forest Soil	MLRPAFKYGIDAILILVPLGGMTYFLFDPDAFNAFLDWLMRLF
Ga0209069_108037242	3300027915	Watersheds	MLKLRPAIRYGIDALLILVPLLGMMYFLFDPEAFNAFLAWLARVL
Ga0222749_101576994	3300029636	Soil	RPAIRYGIDALLILIPLLGMTYFLFDPDAFNAFLAWLARIL
Ga0310038_100312374	3300030707	Peatlands Soil	MVKYAIDALLIFAPLCGVMYFLFNPDAFNAFLAWLARVL
Ga0265760_100520133	3300031090	Soil	LRPAFKYGIDAVLILVPLGGMTYFLFDPDAFNAFLDWLMRLF
Ga0265760_103653522	3300031090	Soil	ILAPMPKLRPAIRYGIDALLILIPLLGMTYFLFDPEAFNAFLAWLARIL
Ga0310915_102510562	3300031573	Soil	MTAALRYTLDTLLIIVPLIVMTYFLFDPAAFNLFTAWLARVV
Ga0310915_104178981	3300031573	Soil	ILRLMPKLRPAIRYGIDAVLILALLLGMTYFSIKPVAFNAWLA
Ga0307476_109968971	3300031715	Hardwood Forest Soil	SMSKEMRPAIRYGIEALLILIPLLVMTYFLFYPDAFNMCLAWLAKVL
Ga0306918_102152433	3300031744	Soil	MPKMGPSIRYGIEALLILIPLLLMTYFLFYPDAFNACLAWLARVL
Ga0306923_113580002	3300031910	Soil	MTAAVRYTLDTLLIVVPLTVMTFFLFDPAAFNLFTGWLARVL
Ga0306921_110524341	3300031912	Soil	MTAAVRYTLDTLLIVVPPTVMTFFLFDPAAFNLFTGWLARVL
Ga0306921_113799842	3300031912	Soil	CSAHWEMTAALRYTLDTLLIIVPLIVMTYFLFDPAAFNLFTAWLARVV
Ga0306921_114622732	3300031912	Soil	MTAAVRYMLDTLLIMVPLIVMTYFLFDPTAFSHLARRSRT
Ga0310912_108647491	3300031941	Soil	GPSIRYGIEALLILIPLLLMTYFLFYPDAFNACLAWLARLL
Ga0306926_120911031	3300031954	Soil	AVPRIGGEVMTAAVRYTLDTLLIVVPLTVMTFFLFDPAAFNLFTGWLARVL
Ga0306922_121545521	3300032001	Soil	TLDTLLIVVPPTVMTFFLFDPAAFNLFTGWLARVL
Ga0306924_114389592	3300032076	Soil	MPKLRPAIRYGIDAVLILAPLLGMTYFLFNPAAFNAWLAWLARML
Ga0306924_117239702	3300032076	Soil	MTAAFRYTRDTLLIIVPLCVMTYFLFDPAAFNFLTAWLARVL
Ga0311301_1000803440	3300032160	Peatlands Soil	MPPVRTMVKYAIDALLIFAPLCGVMYFLFNPDAFNAFLAWLARVL
Ga0306920_1007399772	3300032261	Soil	TLDTLLIIVLLIVMTYFLFDPAAFNLFTAWLARVV
Ga0306920_1011658722	3300032261	Soil	MTTAVRYTLDTLLIMVPLTVMTCFLFDPAAFNLFTGWLARVL
Ga0348332_119801493	3300032515	Plant Litter	LRKVIRYTLDAALIFAPLSGMLYFLFDPAAFNAFLAWLVSVL
Ga0335078_118465802	3300032805	Soil	MPKLPPAVRYGIDAVLILVPLLGMTYFLFNPAAFNAFTAWLARVL
Ga0335081_101996941	3300032892	Soil	MPEPRKVIRYTLEAALIFVPLAGMLYFLFDPAAFNAFLA
Ga0326728_1000004627	3300033402	Peat Soil	MPPRQTIKYAIDCVLVIAPLSGVLYFLFDPDAFNAFLDWLLRVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences