Metagenome Family F095628

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095628
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	42 residues
Representative Sequence	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI
Number of Associated Samples	68
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	40.95 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (59.048 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (39.048 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.70% β-sheet: 0.00% Coil/Unstructured: 49.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00202	Aminotran_3	49.52
PF13414	TPR_11	5.71
PF03144	GTP_EFTU_D2	1.90
PF13370	Fer4_13	0.95
PF13432	TPR_16	0.95
PF01865	PhoU_div	0.95
PF02737	3HCDH_N	0.95
PF13431	TPR_17	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.95
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.95
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.95
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.95
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.95
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.81 %
Unclassified	root	N/A	36.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.81 %
Unclassified	root	N/A	36.19 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	59.05 %
Unclassified	root	N/A	36.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	20.95 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	15.24 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Thermococci	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci	20.95 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	15.24 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Thermococcales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales	20.95 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	6.67 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	1.90 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Thermococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae	20.95 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	6.67 %
Candidatus Nitrosotenuis	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	1.90 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Pyrococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus	20.95 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	5.71 %
Candidatus Nitrosotenuis chungbukensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	0.95 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Pyrococcus horikoshii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii	20.95 %
Nitrosopumilus maritimus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3.81 %
Candidatus Nitrosopumilus koreensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	0.95 %
Candidatus Nitrosotenuis chungbukensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	0.95 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.19 %
Pyrococcus horikoshii OT3	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	20.95 %
Nitrosopumilus maritimus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3.81 %
Candidatus Nitrosopumilus koreensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	0.95 %
Candidatus Nitrosotenuis chungbukensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	0.95 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573026\|GS311G0146KB_1112118313163	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	837	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1064274	Not Available	576	Open in IMG/M
3300000247\|LPaug09P26500mDRAFT_1016426	All Organisms → cellular organisms → Archaea	1106	Open in IMG/M
3300000247\|LPaug09P26500mDRAFT_1025463	Not Available	791	Open in IMG/M
3300000248\|LPfeb09P12500mDRAFT_1003773	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2544	Open in IMG/M
3300000252\|LPjun08P161000mDRAFT_1000042	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	9479	Open in IMG/M
3300000259\|LP_J_08_P26_500DRAFT_1001294	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	4935	Open in IMG/M
3300000264\|LP_A_09_P04_500DRAFT_1002240	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3231	Open in IMG/M
3300000322\|LPaug08P121000mDRAFT_1033252	Not Available	593	Open in IMG/M
3300000323\|LPaug09P202000mDRAFT_1016086	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1262	Open in IMG/M
3300000323\|LPaug09P202000mDRAFT_1035634	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	701	Open in IMG/M
3300001783\|Vondamm_10029524	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1849	Open in IMG/M
3300001783\|Vondamm_10061796	Not Available	1097	Open in IMG/M
3300001974\|GOS2246_10049508	Not Available	1338	Open in IMG/M
3300002177\|JGI24816J26688_1036823	Not Available	912	Open in IMG/M
3300002956\|JGI26059J44795_1068048	Not Available	503	Open in IMG/M
3300002965\|JGI26063J44948_1090551	Not Available	540	Open in IMG/M
3300003147\|Ga0052235_1054488	All Organisms → cellular organisms → Archaea	5674	Open in IMG/M
3300003538\|FS904DNA_1117822	Not Available	699	Open in IMG/M
3300005399\|Ga0066860_10083330	All Organisms → cellular organisms → Archaea	1151	Open in IMG/M
3300005431\|Ga0066854_10038075	Not Available	1587	Open in IMG/M
3300005592\|Ga0066838_10015820	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300005593\|Ga0066837_10040578	Not Available	1785	Open in IMG/M
3300005594\|Ga0066839_10042592	Not Available	1582	Open in IMG/M
3300005594\|Ga0066839_10127498	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	882	Open in IMG/M
3300005603\|Ga0066853_10053894	Not Available	1390	Open in IMG/M
3300005951\|Ga0066379_10224727	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300006012\|Ga0066374_10090152	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	877	Open in IMG/M
3300006013\|Ga0066382_10120579	All Organisms → cellular organisms → Archaea	914	Open in IMG/M
3300006019\|Ga0066375_10119322	All Organisms → cellular organisms → Archaea	838	Open in IMG/M
3300006077\|Ga0081594_1296973	Not Available	507	Open in IMG/M
3300006077\|Ga0081594_1296996	Not Available	507	Open in IMG/M
3300006078\|Ga0081595_1022965	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2107	Open in IMG/M
3300006078\|Ga0081595_1170231	Not Available	792	Open in IMG/M
3300006303\|Ga0068490_1096838	All Organisms → cellular organisms → Archaea	1227	Open in IMG/M
3300006303\|Ga0068490_1172801	Not Available	611	Open in IMG/M
3300006304\|Ga0068504_1211797	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	671	Open in IMG/M
3300006308\|Ga0068470_1176728	Not Available	1720	Open in IMG/M
3300006308\|Ga0068470_1285198	Not Available	886	Open in IMG/M
3300006308\|Ga0068470_1298816	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3494	Open in IMG/M
3300006308\|Ga0068470_1323973	All Organisms → cellular organisms → Archaea	763	Open in IMG/M
3300006308\|Ga0068470_1758616	All Organisms → cellular organisms → Archaea	730	Open in IMG/M
3300006310\|Ga0068471_1091713	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	23685	Open in IMG/M
3300006310\|Ga0068471_1200543	Not Available	2784	Open in IMG/M
3300006310\|Ga0068471_1258795	All Organisms → cellular organisms → Archaea	1484	Open in IMG/M
3300006310\|Ga0068471_1546252	Not Available	1756	Open in IMG/M
3300006310\|Ga0068471_1566850	All Organisms → cellular organisms → Archaea	1441	Open in IMG/M
3300006310\|Ga0068471_1567441	All Organisms → cellular organisms → Archaea	1051	Open in IMG/M
3300006311\|Ga0068478_1121731	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	11454	Open in IMG/M
3300006315\|Ga0068487_1020778	All Organisms → cellular organisms → Archaea	3554	Open in IMG/M
3300006316\|Ga0068473_1373383	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300006316\|Ga0068473_1564599	Not Available	634	Open in IMG/M
3300006316\|Ga0068473_1678503	Not Available	677	Open in IMG/M
3300006318\|Ga0068475_1048920	All Organisms → cellular organisms → Archaea	1473	Open in IMG/M
3300006325\|Ga0068501_1405248	Not Available	617	Open in IMG/M
3300006326\|Ga0068477_1481146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	550	Open in IMG/M
3300006326\|Ga0068477_1508490	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	622	Open in IMG/M
3300006327\|Ga0068499_1496093	Not Available	1234	Open in IMG/M
3300006330\|Ga0068483_1144621	All Organisms → cellular organisms → Archaea	1618	Open in IMG/M
3300006331\|Ga0068488_1135512	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	912	Open in IMG/M
3300006331\|Ga0068488_1261694	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	1139	Open in IMG/M
3300006335\|Ga0068480_1132931	Not Available	4928	Open in IMG/M
3300006335\|Ga0068480_1313880	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3650	Open in IMG/M
3300006338\|Ga0068482_1319115	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	670	Open in IMG/M
3300006338\|Ga0068482_1335678	All Organisms → cellular organisms → Archaea	799	Open in IMG/M
3300006339\|Ga0068481_1214839	Not Available	2364	Open in IMG/M
3300006339\|Ga0068481_1364218	Not Available	2407	Open in IMG/M
3300006339\|Ga0068481_1440423	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → Candidatus Nitrosotenuis chungbukensis	4198	Open in IMG/M
3300006339\|Ga0068481_1484519	All Organisms → cellular organisms → Archaea	1437	Open in IMG/M
3300006339\|Ga0068481_1570933	Not Available	1804	Open in IMG/M
3300006340\|Ga0068503_10196947	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Candidatus Nitrosopumilus koreensis	5864	Open in IMG/M
3300006340\|Ga0068503_10207965	Not Available	1986	Open in IMG/M
3300006340\|Ga0068503_10463541	Not Available	507	Open in IMG/M
3300006341\|Ga0068493_10269495	All Organisms → cellular organisms → Archaea	1262	Open in IMG/M
3300006344\|Ga0099695_1030596	All Organisms → cellular organisms → Archaea	4902	Open in IMG/M
3300006346\|Ga0099696_1151743	Not Available	1886	Open in IMG/M
3300006346\|Ga0099696_1153208	All Organisms → cellular organisms → Archaea	1812	Open in IMG/M
3300006346\|Ga0099696_1178520	Not Available	1891	Open in IMG/M
3300006346\|Ga0099696_1306021	Not Available	551	Open in IMG/M
3300006346\|Ga0099696_1309239	All Organisms → cellular organisms → Archaea	663	Open in IMG/M
3300006347\|Ga0099697_1432934	All Organisms → cellular organisms → Archaea	874	Open in IMG/M
3300006414\|Ga0099957_1061633	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis	7050	Open in IMG/M
3300006567\|Ga0099958_1123577	Not Available	2301	Open in IMG/M
3300006567\|Ga0099958_1123897	Not Available	1167	Open in IMG/M
3300006902\|Ga0066372_10706677	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	606	Open in IMG/M
3300006902\|Ga0066372_10906342	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	537	Open in IMG/M
3300007160\|Ga0099959_1039807	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	18981	Open in IMG/M
3300007160\|Ga0099959_1132298	All Organisms → cellular organisms → Archaea	1305	Open in IMG/M
3300007291\|Ga0066367_1046126	Not Available	1532	Open in IMG/M
3300007508\|Ga0105011_1128013	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	917	Open in IMG/M
3300007509\|Ga0105012_1140859	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	917	Open in IMG/M
3300008464\|Ga0115336_157550	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300009703\|Ga0114933_10799628	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	601	Open in IMG/M
3300020432\|Ga0211556_10315467	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	702	Open in IMG/M
3300020447\|Ga0211691_10352284	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	589	Open in IMG/M
3300020449\|Ga0211642_10405589	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	587	Open in IMG/M
3300021065\|Ga0206686_1004114	All Organisms → cellular organisms → Bacteria	4078	Open in IMG/M
3300024344\|Ga0209992_10363445	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	579	Open in IMG/M
3300029149\|Ga0119977_101035	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	725	Open in IMG/M
3300031775\|Ga0315326_10469596	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	811	Open in IMG/M
3300031861\|Ga0315319_10446842	All Organisms → cellular organisms → Archaea	647	Open in IMG/M
3300032360\|Ga0315334_10123649	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	2019	Open in IMG/M
3300032360\|Ga0315334_11422278	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	595	Open in IMG/M
3300032820\|Ga0310342_102510243	All Organisms → cellular organisms → Archaea → Euryarchaeota → Thermococci → Thermococcales → Thermococcaceae → Pyrococcus → Pyrococcus horikoshii → Pyrococcus horikoshii OT3	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.05%
Bioremediation	Engineered → Bioremediation	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Hydrocarbon	Engineered → Bioremediation → Hydrocarbon	0.95%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.05%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.67%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	6.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.86%
Coastal	Environmental → Aquatic → Marine → Coastal	1.90%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.90%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	39.05%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	21.90%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	17.14%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.67%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	4.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.95%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	39.05%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	21.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	16.19%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.76%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.86%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.90%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	1.90%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	1.90%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.90%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Deep-Ocean Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep-Ocean Sediment	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.95%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine	0.95%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.95%
Sediment	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified → Sediment	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573026	Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-FOS-0p8-Deep1200	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000247	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500m	Environmental	Open in IMG/M
3300000248	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P12 500m	Environmental	Open in IMG/M
3300000252	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 1000m	Environmental	Open in IMG/M
3300000259	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_08_P26_500	Environmental	Open in IMG/M
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental	Open in IMG/M
3300000322	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P12 1000m	Environmental	Open in IMG/M
3300000323	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000m	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002177	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m	Environmental	Open in IMG/M
3300002956	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - 250m_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300002965	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003147	Planktonic microbial communities from North Pacific Subtropical Gyre	Environmental	Open in IMG/M
3300003538	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS904_Marker33_DNA	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006077	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid B	Environmental	Open in IMG/M
3300006078	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid C	Environmental	Open in IMG/M
3300006303	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_1_1000m	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006315	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006318	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0200m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006327	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0125m	Environmental	Open in IMG/M
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental	Open in IMG/M
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007509	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300008464	Deep sea sediment microbial communities from the Gulf of Mexico ? treatment with crude oil and Corexit	Engineered	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300020432	Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300029149	Marine sediment microbial communities from University of Hong Kong - Deep-ocean Sediment	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS311G0146KB_00562190	2189573026	Marine Estuarine	MVYMYSMNLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI
LPjun09P12500mDRAFT_10642742	3300000222	Marine	MVYMYSTNVNFCIRNARAALVMKYGNEPFYDLRASSYA
LPaug09P26500mDRAFT_10164262	3300000247	Marine	MVYMYSINLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
LPaug09P26500mDRAFT_10254632	3300000247	Marine	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRI*
LPfeb09P12500mDRAFT_10037731	3300000248	Marine	MYSIYLTFCIRNARAALVMKYGIEPFYDSQASSYA
LPjun08P161000mDRAFT_100004215	3300000252	Marine	MVYMYSIHLTFCIRNARAALVMKYGNGPFYDLQASSYAYKMRI*
LP_J_08_P26_500DRAFT_10012947	3300000259	Marine	MVYMYSIISPFAYVTQEPLVMKYGIEPFYDSQASSYAYKMRI*
LP_A_09_P04_500DRAFT_10022404	3300000264	Marine	MYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMR
LPaug08P121000mDRAFT_10332522	3300000322	Marine	MYSTNFFLCIRNTSAALVMNYGNEPVYDLQASSYAYKMRI*
LPaug09P202000mDRAFT_10160861	3300000323	Marine	MVYMYSINLNFCIRNARAALVMKYGNEPFYDLRASSYAY
LPaug09P202000mDRAFT_10356342	3300000323	Marine	MVYMYSTNFFLCIRNTSAALVMNYGNEPVYDLQASSYAYKMRI*
Vondamm_100295243	3300001783	Hydrothermal Vent Plume	MVYMYLINLNFCIRNARAALVMKYGIGPFYDLQASSY
Vondamm_100617961	3300001783	Hydrothermal Vent Plume	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSY
GOS2246_100495082	3300001974	Marine	MIAIKDHFWKICCIVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
JGI24816J26688_10368232	3300002177	Marine	MVYMYSIYLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRI*
JGI26059J44795_10680482	3300002956	Marine	MVYMYSIHLTFCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
JGI26063J44948_10905512	3300002965	Marine	MVYMYSMNVNFCIRNARAALVMKYGNEPFYDLRASSYAYKMW
Ga0052235_10544884	3300003147	Marine	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKIGFDQNDQI*
FS904DNA_11178222	3300003538	Diffuse Hydrothermal Flow Volcanic Vent	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI*
Ga0066860_100833302	3300005399	Marine	MYSTDFFLCIRNSSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0066854_100380752	3300005431	Marine	MYSIHVTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRFDKLFKS
Ga0066838_100158203	3300005592	Marine	MYSIHVTFCIRNARAALVMKYGSEPVYDLQASSYAYKMWI*
Ga0066837_100405782	3300005593	Marine	MIAIKDHFRKICCTVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0066839_100425922	3300005594	Marine	MYSTNFFLCIRNSSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0066839_101274982	3300005594	Marine	MVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0066853_100538942	3300005603	Marine	MVYMYSIHVTFCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
Ga0066379_102247272	3300005951	Marine	MVYMYLINLTSCIRNARAALVMKYGIGPFYDLRAS
Ga0066374_100901522	3300006012	Marine	MYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0066382_101205792	3300006013	Marine	MVYMYSTNFFLCIRNSSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0066375_101193221	3300006019	Marine	MYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKM
Ga0081594_12969731	3300006077	Diffuse Hydrothermal Fluid	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYA
Ga0081594_12969962	3300006077	Diffuse Hydrothermal Fluid	MVYMYLINLNFCIRNARAALVMKYGIGPFYDLQPPVTH
Ga0081595_10229653	3300006078	Diffuse Hydrothermal Fluids	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYK
Ga0081595_11702312	3300006078	Diffuse Hydrothermal Fluids	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMWI*
Ga0068490_10968381	3300006303	Marine	YSTNFFLCIRNSSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0068490_11728012	3300006303	Marine	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
Ga0068504_12117971	3300006304	Marine	MYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKM*
Ga0068470_11767283	3300006308	Marine	MVYMYSINLNYCIRNARAALVMKYGNEPFYDLRASSYAYKM
Ga0068470_12851982	3300006308	Marine	MYSIHVTFCIRNARAALVMKYGNEPFYDLQASSYAYKMRI*
Ga0068470_12988165	3300006308	Marine	MVYMYSIHLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068470_13239732	3300006308	Marine	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDSQAS
Ga0068470_17586161	3300006308	Marine	MVYMYLINLTFCIRNARAALVMKYGIGPFYDLEPPITH
Ga0068471_109171318	3300006310	Marine	MYSIHVTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRI*
Ga0068471_12005432	3300006310	Marine	MVYMYSIHLTFCIRNARAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0068471_12587952	3300006310	Marine	ICCTVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0068471_15462522	3300006310	Marine	MYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRI*
Ga0068471_15668502	3300006310	Marine	MYSTNFFQLLRNTSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0068471_15674412	3300006310	Marine	MYSIDVTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI*
Ga0068471_15873672	3300006310	Marine	MVYMYLINLTSCIRNARAALVMKYGIGPFYDLEPPITHTK*
Ga0068478_112173120	3300006311	Marine	MYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI*
Ga0068487_10207781	3300006315	Marine	MVYMYSIELNFCIRNARAALVMKYGSGPFYDLQASSYAYKMWI*
Ga0068473_13733832	3300006316	Marine	VYMYLINLNLCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068473_15645992	3300006316	Marine	MVYMYSTNLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWIRPNTQI*
Ga0068473_16785032	3300006316	Marine	MVYMYSINLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWF
Ga0068475_10489202	3300006318	Marine	MVYMYSISLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMWI*
Ga0068501_14052482	3300006325	Marine	MYFLFSFCTVYKYLLHQSFRIRHSRAALVMKYGIEPFYDSQASSYAYNMRI*
Ga0068477_14811461	3300006326	Marine	MVYMYSININFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068477_15084901	3300006326	Marine	IYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0068499_14960932	3300006327	Marine	LNGLYVFNDLNFCIRNARAALVMKYGSGPFYDLQASSYAYKMWI*
Ga0068483_11446212	3300006330	Marine	MVYMYSMNVNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068488_11355121	3300006331	Marine	MVYMYSMNVNFCIRNASAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068488_12616942	3300006331	Marine	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASNYAYKMRI*
Ga0068480_11329313	3300006335	Marine	MVYKYIFYQGFRIVTSSAALVMKYGNGPFYDLQASSYAYKMWI*
Ga0068480_13138804	3300006335	Marine	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRFDRMIKSEM*
Ga0068482_13191152	3300006338	Marine	MYFIHPTLCIRNARAALVMKYGNEPFYDLQASSYAYKMRF*
Ga0068482_13356781	3300006338	Marine	MVYMYSINLNFCIRNARAALVMKYGSGPFYDLQASSYAYKMW
Ga0068481_12148392	3300006339	Marine	MVYMYSIHLSFCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
Ga0068481_13642182	3300006339	Marine	MVYMYSIHVTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI*
Ga0068481_14404232	3300006339	Marine	MYSIHVTFCIRNARAALVMKYGIEPFYDSQAPVTHTK*
Ga0068481_14845192	3300006339	Marine	MVYMYLINLTFCIRNARAALVMKYGNGPFYDLQASSYAYKMWI*
Ga0068481_15709333	3300006339	Marine	MVYMYSINLNLCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0068503_101969479	3300006340	Marine	MYSIHLTFCIRNARAALVMKYGNGPFYDLQASSYAYKMSFDKL
Ga0068503_102079652	3300006340	Marine	MVYMYSMNLNFCIRNTSAALVMNYGNEPVYDLQASSYAYKMRI*
Ga0068503_104635412	3300006340	Marine	MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMWI
Ga0068493_102694952	3300006341	Marine	MYFIYVESCIRNTSAALVMKYGIVPLYDLQDSSYAYKMRI*
Ga0099695_10305963	3300006344	Marine	IIFKVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0099696_11517432	3300006346	Marine	MVYMYSTECQLLHSNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0099696_11532082	3300006346	Marine	MVYMYSTKIDFCIRNARAALVMKYGSEPFYDLRASSYAYKMWI*
Ga0099696_11785202	3300006346	Marine	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMWI*
Ga0099696_13060212	3300006346	Marine	MVYMYSTNVNFCIRNARAALVMKYGNEPFYDLQASSYAYKM*
Ga0099696_13092392	3300006346	Marine	MYLINFTSCIRNARAALVMKYGIVPFYDLQASSYAYKMRI*
Ga0099697_14329342	3300006347	Marine	MVYMYSTDVNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI*
Ga0099957_10616332	3300006414	Marine	MYSIHVTFCIRNARAALVMKYGIEPFYDLQASSYAYKMRI*
Ga0099958_11235772	3300006567	Marine	MVYMYSMNLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMRI*
Ga0099958_11238971	3300006567	Marine	MVYMYSIHLTFCIRNARAALVMKYGIGPFYDLQAS
Ga0066372_107066771	3300006902	Marine	KICCTVYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI*
Ga0066372_109063422	3300006902	Marine	SINVNSCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
Ga0099959_103980725	3300007160	Marine	MYSIHLTFCIRNARAALVMKYGIGPFYDLQASSYAYKMRI*
Ga0099959_11322982	3300007160	Marine	MYSIHLTFCIRNARAALVMKYGNGPFYDLQASSYAYKMWI*
Ga0066367_10461261	3300007291	Marine	MYSINFFLCIRNTSAALVMNYGNEPVYDLQASSYA
Ga0105011_11280131	3300007508	Marine	VYMYLMNLNFCIRNARAALVMKYGSGPFYDLQASSYAYKMWV*
Ga0105012_11408591	3300007509	Marine	VYMYLMNLNFCIRNARAALVMKYGSGPFYDLQASSYAYKMWI*
Ga0115336_1575501	3300008464	Sediment	YMYLRDFCFCIRNPSAALAMKYGSEPFYDSWASSYAYKMRI*
Ga0114933_107996282	3300009703	Deep Subsurface	YMYFIYVESCIRNTSAALVMKYGIVPLYDLQASNYAYKMRI*
Ga0211556_103154672	3300020432	Marine	YLMNLNFCIRNARAALVMKYGSGPFYDLQASSYAYKMWI
Ga0211691_103522841	3300020447	Marine	MYSINFFLCIRNTSAALVMNYGNEPVYDLQASNYAYKMRI
Ga0211642_104055891	3300020449	Marine	YSTNFFLCIRNTSAALVMNYGNEPVYDLQASSYAYKMRI
Ga0206686_10041143	3300021065	Seawater	MVYMYSIHLTFCIRNARAALVMKYGIEPFYDSQASSYAYKMRI
Ga0209992_103634452	3300024344	Deep Subsurface	INLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI
Ga0119977_1010351	3300029149	Deep-Ocean Sediment	VYMYLRDFCFCIRNPSAALAMKYGSEPFYDSWASSYAYKMRI
Ga0315326_104695962	3300031775	Seawater	MYSINLNFCIRNARAALVMKYGNEPFYDLRASSYAYKMWI
Ga0315319_104468421	3300031861	Seawater	MYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYA
Ga0315334_101236491	3300032360	Seawater	MYSIHVTFCIRNARAALVMKYGIEPFYDLQASSYA
Ga0315334_114222782	3300032360	Seawater	VYMYFIYVESCIRNTSAALVMKYGIVPLYDLQASSYAYKMRI
Ga0310342_1025102432	3300032820	Seawater	QPISSYCIRNTSAALVMNYGNEPVYDLQASSYAYKMRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095628

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences