Metagenome / Metatranscriptome Family F095571

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095571
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	58 residues
Representative Sequence	MPRDGAIIFSDLIGKLDLLRVACDKCERDGCYGLHRLIEERGRDAKLIDWLDELI
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.08 %
% of genes near scaffold ends (potentially truncated)	56.19 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.28% β-sheet: 16.87% Coil/Unstructured: 63.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00216	Bac_DNA_binding	11.43
PF12071	DUF3551	5.71
PF13467	RHH_4	4.76
PF01068	DNA_ligase_A_M	0.95
PF04977	DivIC	0.95
PF02643	DUF192	0.95
PF03330	DPBB_1	0.95
PF13751	DDE_Tnp_1_6	0.95
PF14023	DUF4239	0.95
PF11159	DUF2939	0.95
PF13406	SLT_2	0.95
PF00313	CSD	0.95
PF06823	DUF1236	0.95
PF01075	Glyco_transf_9	0.95
PF00589	Phage_integrase	0.95
PF00535	Glycos_transf_2	0.95
PF14659	Phage_int_SAM_3	0.95
PF01209	Ubie_methyltran	0.95
PF01042	Ribonuc_L-PSP	0.95
PF06411	HdeA	0.95
PF06325	PrmA	0.95
PF08238	Sel1	0.95
PF13356	Arm-DNA-bind_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	11.43
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.95
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.95
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.95
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.95
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.95
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.95
COG2919	Cell division protein FtsB	Cell cycle control, cell division, chromosome partitioning [D]	0.95
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG4839	Cell division protein FtsL	Cell cycle control, cell division, chromosome partitioning [D]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.24 %
Unclassified	root	N/A	44.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	8.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.95 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.95 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.95 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	8.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.95 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.95 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.95 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	7.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.95 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.95 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.95 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.95 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	7.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.95 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.95 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	0.95 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.95 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	7.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Syntrophobacter fumaroxidans MPOB	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	0.95 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.95 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.95 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	0.95 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_179198	Not Available	541	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1018531	Not Available	1112	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10059219	Not Available	983	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1005485	Not Available	1316	Open in IMG/M
3300000955\|JGI1027J12803_100522424	Not Available	562	Open in IMG/M
3300005093\|Ga0062594_100500286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1027	Open in IMG/M
3300005332\|Ga0066388_105078475	Not Available	668	Open in IMG/M
3300005356\|Ga0070674_100785179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	821	Open in IMG/M
3300005764\|Ga0066903_100939299	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300005764\|Ga0066903_102961022	Not Available	920	Open in IMG/M
3300005764\|Ga0066903_102988102	Not Available	916	Open in IMG/M
3300005764\|Ga0066903_107206750	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_109062704	Not Available	503	Open in IMG/M
3300006354\|Ga0075021_11101272	Not Available	520	Open in IMG/M
3300006576\|Ga0074047_11217450	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300006852\|Ga0075433_10076523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2947	Open in IMG/M
3300006852\|Ga0075433_10834832	Not Available	804	Open in IMG/M
3300006852\|Ga0075433_11436007	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300006854\|Ga0075425_100235192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2108	Open in IMG/M
3300006854\|Ga0075425_101289841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300006914\|Ga0075436_100702718	Not Available	749	Open in IMG/M
3300010358\|Ga0126370_11206702	Not Available	704	Open in IMG/M
3300010359\|Ga0126376_13094880	Not Available	514	Open in IMG/M
3300010360\|Ga0126372_12898335	Not Available	532	Open in IMG/M
3300010361\|Ga0126378_10095587	All Organisms → cellular organisms → Bacteria → Proteobacteria	2919	Open in IMG/M
3300012198\|Ga0137364_10718607	Not Available	754	Open in IMG/M
3300012200\|Ga0137382_10633229	Not Available	765	Open in IMG/M
3300012208\|Ga0137376_10438345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300012208\|Ga0137376_11088370	Not Available	684	Open in IMG/M
3300012906\|Ga0157295_10087167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	829	Open in IMG/M
3300012938\|Ga0162651_100030940	Not Available	783	Open in IMG/M
3300012948\|Ga0126375_12011587	Not Available	511	Open in IMG/M
3300012951\|Ga0164300_11013601	Not Available	535	Open in IMG/M
3300012961\|Ga0164302_10532804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300012971\|Ga0126369_10988777	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012971\|Ga0126369_11549723	Not Available	752	Open in IMG/M
3300012989\|Ga0164305_10674935	Not Available	841	Open in IMG/M
3300013296\|Ga0157374_10366867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300015371\|Ga0132258_12089984	Not Available	1424	Open in IMG/M
3300015373\|Ga0132257_101132520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	989	Open in IMG/M
3300015374\|Ga0132255_105884720	Not Available	519	Open in IMG/M
3300016445\|Ga0182038_10018470	All Organisms → cellular organisms → Bacteria → Proteobacteria	4139	Open in IMG/M
3300016445\|Ga0182038_11009245	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300018000\|Ga0184604_10153078	Not Available	762	Open in IMG/M
3300018073\|Ga0184624_10031991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	2038	Open in IMG/M
3300018081\|Ga0184625_10173014	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300019867\|Ga0193704_1057641	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300019876\|Ga0193703_1017068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1107	Open in IMG/M
3300020018\|Ga0193721_1106396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	715	Open in IMG/M
3300021344\|Ga0193719_10460431	Not Available	516	Open in IMG/M
3300021560\|Ga0126371_11875581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	719	Open in IMG/M
3300021560\|Ga0126371_13364317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300022756\|Ga0222622_10917844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300022883\|Ga0247786_1131706	Not Available	555	Open in IMG/M
3300025927\|Ga0207687_10848065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300025936\|Ga0207670_11207070	Not Available	640	Open in IMG/M
3300025942\|Ga0207689_10200895	Not Available	1645	Open in IMG/M
3300026023\|Ga0207677_11616107	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300026116\|Ga0207674_12121691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	526	Open in IMG/M
3300026452\|Ga0256821_1008134	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300027252\|Ga0209973_1024002	Not Available	828	Open in IMG/M
3300027874\|Ga0209465_10164049	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300028589\|Ga0247818_10667006	Not Available	719	Open in IMG/M
3300028711\|Ga0307293_10168731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	697	Open in IMG/M
3300028713\|Ga0307303_10140396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	575	Open in IMG/M
3300028791\|Ga0307290_10114489	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300028793\|Ga0307299_10321296	Not Available	581	Open in IMG/M
3300028793\|Ga0307299_10330624	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300028799\|Ga0307284_10306562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	638	Open in IMG/M
3300028807\|Ga0307305_10002864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	7166	Open in IMG/M
3300028811\|Ga0307292_10531082	Not Available	505	Open in IMG/M
3300028819\|Ga0307296_10081616	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300028885\|Ga0307304_10313392	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300030966\|Ga0075383_11079935	Not Available	557	Open in IMG/M
3300031199\|Ga0307495_10060622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	803	Open in IMG/M
3300031226\|Ga0307497_10106035	Not Available	1104	Open in IMG/M
3300031226\|Ga0307497_10140951	Not Available	990	Open in IMG/M
3300031226\|Ga0307497_10172689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	915	Open in IMG/M
3300031421\|Ga0308194_10021341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1422	Open in IMG/M
3300031469\|Ga0170819_17437786	Not Available	546	Open in IMG/M
3300031545\|Ga0318541_10138186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1331	Open in IMG/M
3300031546\|Ga0318538_10339200	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300031573\|Ga0310915_10237729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1280	Open in IMG/M
3300031719\|Ga0306917_10191518	All Organisms → cellular organisms → Bacteria → Proteobacteria	1543	Open in IMG/M
3300031719\|Ga0306917_10862464	Not Available	709	Open in IMG/M
3300031744\|Ga0306918_10269759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1303	Open in IMG/M
3300031771\|Ga0318546_10383400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	980	Open in IMG/M
3300031795\|Ga0318557_10391667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300031819\|Ga0318568_10547108	Not Available	722	Open in IMG/M
3300031854\|Ga0310904_10184606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1243	Open in IMG/M
3300031879\|Ga0306919_10057742	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300031896\|Ga0318551_10947455	Not Available	503	Open in IMG/M
3300031959\|Ga0318530_10294786	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300032013\|Ga0310906_11420395	Not Available	510	Open in IMG/M
3300032094\|Ga0318540_10115182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1273	Open in IMG/M
3300032179\|Ga0310889_10161363	Not Available	1011	Open in IMG/M
3300032205\|Ga0307472_100027057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3258	Open in IMG/M
3300032261\|Ga0306920_100107589	All Organisms → cellular organisms → Bacteria → Proteobacteria	4131	Open in IMG/M
3300032828\|Ga0335080_11042386	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300033290\|Ga0318519_10026582	All Organisms → cellular organisms → Bacteria	2673	Open in IMG/M
3300033412\|Ga0310810_10061969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4532	Open in IMG/M
3300033433\|Ga0326726_10679201	Not Available	993	Open in IMG/M
3300034090\|Ga0326723_0317829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	700	Open in IMG/M
3300034820\|Ga0373959_0194059	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.81%
Host-Associated	Host-Associated	16.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.10%
Plants	Host-Associated → Plants	16.19%
Aquatic	Environmental → Aquatic	5.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Sediment	Environmental → Aquatic → Sediment	4.76%
Peat	Environmental → Terrestrial → Peat	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03055920	2199352025	Soil	MPHDGAIVFADLIGKLDLLRVSCVKCGRDGCYGLSRLIERRGRDAKLVDWLDEIIADCAK
AF_2010_repII_A01DRAFT_10185313	3300000580	Forest Soil	PADSSISPSGGVSCPGDGAIIFSDLIRKLDLLRVRCDKCGRDGCYELIDKLGRDGKIID*
AF_2010_repII_A1DRAFT_100592192	3300000597	Forest Soil	VSCPGDGAIIFSDLIRKLDLLRVRCDKCGRDGCYELIDKLGRDGKIID*
AF_2010_repII_A10DRAFT_10054851	3300000816	Forest Soil	MKTRPGDGAIIFSDLIGKLDPLRVCCDKCGRDGCYELIDKLGGDGKIID*
JGI1027J12803_1005224242	3300000955	Soil	MPRDGAIIFADLICKLDMLCVARDKCARDGCYGLNRLIERRGRDAKLIDWLDELTADCAKKRAGN
Ga0062594_1005002863	3300005093	Soil	MARDGAIIFSDLVGKLDVLQVAYEKCGRDGRYILARLIRNRGRDAKLIDWLDELTAECPKKIAHNT*
Ga0066388_1050784752	3300005332	Tropical Forest Soil	LPYPPPSDRGGDGAIVFGDLIGKLDMLRVSCDKCGRDGCYGLAKLIDKRGRDGKLVD*
Ga0070674_1007851791	3300005356	Miscanthus Rhizosphere	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPDWLNDVA
Ga0066903_1009392993	3300005764	Tropical Forest Soil	MPRDGAITFGDLIGKLDMLCVSCEKCGRDGCYGLAMLIDKRGRDSKIVDWLDEITADCP
Ga0066903_1029610222	3300005764	Tropical Forest Soil	MPSNGAIIFGDLIGKLDRLRVSCEKCGRDGCYGLAKLIDKRGRDGKLVDWPEELTADCPRRSHYSI*
Ga0066903_1029881022	3300005764	Tropical Forest Soil	MPRDGAIVFGDLIGKLDMLRASCEKCGRDGRYGLAKLIDKGGRDGKLVDWLDELTADCPRRKSLTTQYE*
Ga0066903_1072067502	3300005764	Tropical Forest Soil	MPRDGAIIFGDLIGKLDMLRVSCEKCWRDGCYGLAMLIDKRGRDSKIVDWLDQITADCPKKSALNCQAKK*
Ga0066903_1090627041	3300005764	Tropical Forest Soil	TRPGDGAIIFSDLIGKLDPLRVCCDKCGRDGCYELIDKLGGDGKIID*
Ga0075021_111012722	3300006354	Watersheds	MPRDGATVFGDLIGKLDLLQVSCEKCRREGRYSLTYLITERGRDAKLIDWLDELT
Ga0074047_112174501	3300006576	Soil	MPRDGAIIFSDLIGKLDMLRVACDKCGRDGRYRLPRLILDRGADTKLPDWLNDIA
Ga0075433_100765236	3300006852	Populus Rhizosphere	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPDWLNDVAAGCP
Ga0075433_108348323	3300006852	Populus Rhizosphere	MARDGAIIFSDLVGKLDVLQVAYEKCERDGRYILARLIRNRGRDAKLIDWLDELIAECPKKIAHNT*
Ga0075433_114360072	3300006852	Populus Rhizosphere	VTMPRDGAIIFADLIGKLDLLRIACDKCGRDGCYGLNRLIERRGRNAQLKIWLDERTADCAKKREVSVVL*
Ga0075425_1002351922	3300006854	Populus Rhizosphere	MARDGAIIFSDLVGKLDVLQVAYEKCERDGRYILARLIRNRGRDAKLIDWLDELTAECPKKIAHNT*
Ga0075425_1012898412	3300006854	Populus Rhizosphere	MMKPRLLNNLDGAILFGDLIGKLDVLRVSCEKCGRDGCYGLAKLIDKGGRDGKSVDWL
Ga0075436_1007027182	3300006914	Populus Rhizosphere	MPRDGAIIFSDLIGKLRVACEKCGRDGCYGLNRLIERRGRDAKLIAIGS
Ga0126370_112067022	3300010358	Tropical Forest Soil	MKTRPGDGAIIFSDLIGKLDLLRVCCDKCGRDGCYELIDKLGRDGKIID*
Ga0126376_130948801	3300010359	Tropical Forest Soil	MPRDGAIVFGDLIGKLDMLRVSCDKCGRDGCYGLAKLIDKRGRDGKLVD*
Ga0126372_128983351	3300010360	Tropical Forest Soil	MPRDGAIVFGDLIGKLDMLRVSCEKCGRDGRYGLAKLIDKRSRDGKLVDWLDELTADCPKKRGEVSA
Ga0126378_100955871	3300010361	Tropical Forest Soil	MKTRPGDGAIIFSDLIGNLDLLRVCCDKCGRDGCYELIDKLGRDGKIID*
Ga0137364_107186072	3300012198	Vadose Zone Soil	MPRDGAIIFSDLIGKLDLLRVACDKCGRDGCSGLHRLIEKRGRDAKLIDWLDELTAEKMCTT*
Ga0137382_106332292	3300012200	Vadose Zone Soil	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDAKLIDWRDELTTECPRRLRTTHE*
Ga0137376_104383451	3300012208	Vadose Zone Soil	SGATLPRDRAIIFSDLIGKLYLLRVACDKCGRDGCSGLHRLIEKRGSDAKLIDWLDELTAECPKKMCTT*
Ga0137376_110883702	3300012208	Vadose Zone Soil	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDAKLIDWLDELTAECPRRLRTTHE*
Ga0157295_100871672	3300012906	Soil	LWSIIPRDGAIIFADLIGKLDVLRVHCDKCERDGCYGLSRLIHKRGRDGKVIDWLDELTAEVPEEDRVQYE*
Ga0162651_1000309401	3300012938	Soil	VPRDGAIIFSDLIGKLDMLRVACDKCGRDGCYGLNRLIEKRGREAKLIDWL
Ga0126375_120115872	3300012948	Tropical Forest Soil	MPRDGAIIFGDLYGRLDVLRVTCDKCGRGGSYGLSRLINQRGRDGKIVDWLIELTAACPN
Ga0164300_110136012	3300012951	Soil	MPRGGATVFSDLISKLDVLRVSCSKCDRDGCYGLSRLINQRGRDAKLIDWLDIY*
Ga0164302_105328042	3300012961	Soil	MARDGAIIFSDLVGKLDVLQVAYEKCGRDGRYILARLIRNRGRDAKLIDWLDELTVECPKKIAHNT*
Ga0126369_109887772	3300012971	Tropical Forest Soil	MKTRPGDGAIIFSDLIGKLDLLRVCCDKCGRDGCYELID
Ga0126369_115497231	3300012971	Tropical Forest Soil	MPRDGAIVFGDLIGKLDMLRASCEKCGRDGRYGLAKLIDKRGRDGKLVDWLDELTAD
Ga0164305_106749351	3300012989	Soil	MPRDGAIIFSDLLGKLDSLRVACTKCGRDGRYQVQRLINDRGRDAKL
Ga0157374_103668672	3300013296	Miscanthus Rhizosphere	MPRDGAIIFSDLLGKLDSLRVACAKCDRAGTYRLTGLIERRGR
Ga0132258_120899842	3300015371	Arabidopsis Rhizosphere	MPRDDAIIFSDLIGKLDMIRVACDKCGRDGCYGLARLTDKRGRDAKLTDWLDELIDTVRRSKHTI*
Ga0132257_1011325202	3300015373	Arabidopsis Rhizosphere	MPRDGAIIFSDLIGKLDDVRVSCETCGRSGRYQVQRLIKDRGRDAKLIDWIDELTADCRK
Ga0132255_1058847201	3300015374	Arabidopsis Rhizosphere	LPRDGAITFSDLISKLDVPHVSCEKCGREGRYSLTYLILDRGRDAKIIDWLDELTVECPKKIVQ
Ga0182038_100184708	3300016445	Soil	MPSNGAIIFGDLIGKVDRLRVSCEKCGRDGCYGLAKLIDKRGRDRKLVYWPES
Ga0182038_110092451	3300016445	Soil	MPRDGAIVFGDLIGKLDRLQVSCGKCGRDGSYGLTKLIDRRGRDGKLVD
Ga0184604_101530782	3300018000	Groundwater Sediment	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDAKLIDWLDELTAECPRRLRTTHE
Ga0184624_100319913	3300018073	Groundwater Sediment	MPRDGGDLTGKLGVLRVSCKKCGRDGRYILARLIRNSGRDAKLIDWLDELTAEYPKKIAHNT
Ga0184625_101730141	3300018081	Groundwater Sediment	MLMPRDGAIIFSDLIGKLDMLRVACDKCGRDGCYGLHRLIEKRGREAKLIDWLDELTAECPKKI
Ga0193704_10576413	3300019867	Soil	MIAPMPRDGAIIFSDLIGKLEVLQVACEKCERDGRYILARLIRNRGRD
Ga0193703_10170682	3300019876	Soil	MPRDGAIIFGDLIGKLDMLRVSCEKRGRDGCYGLGRLIEKRGRDAKLTDWLDEITAECPK
Ga0193721_11063961	3300020018	Soil	MSRDGAIIFADLIGKADLVRVACEKCGRDGSFRLHRLIEDRGRGAKLIDWLDELT
Ga0193719_104604311	3300021344	Soil	MPRNGAITFSDLIGKLDLLRVSCEKCGRDGCYGLRRLIAKRGRDGKLTDWLGELPASVRRRLHTT
Ga0126371_118755812	3300021560	Tropical Forest Soil	MPRDGAITFGDLIGKLDMLCVSCEKCGRDGCYGLAMLIDKRGRDSKIVDWLDEITADCPKKETVS
Ga0126371_133643172	3300021560	Tropical Forest Soil	VPRDGAIVFSDLIGKLDDLRVSCDKCGRSGRYQVQRLINDRGRDAKVIDWLDQITAAPTPDSIHR
Ga0222622_109178441	3300022756	Groundwater Sediment	AIIFSDLIGKLDLLRVACDKCGRDGCSGLHRLIEKRGRDAKLIDWLDELTAECPKKMCTT
Ga0247786_11317061	3300022883	Soil	MPRDGAIIFSDLIGKLDLLRVRCDKCWRDGRYRLPRLILDRGADTKLPD
Ga0207687_108480652	3300025927	Miscanthus Rhizosphere	MARDGAIIFSDLVGKLDVLQVAYEKCGRDGRYILARLIRNRGRDAKSLIG
Ga0207670_112070701	3300025936	Switchgrass Rhizosphere	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPDWLNDVAA
Ga0207689_102008955	3300025942	Miscanthus Rhizosphere	MPRDGATIFSDLIGKLDVLRVACDKRGRDGCYGLNRLIGQRGRDGKLIDWLDKL
Ga0207677_116161072	3300026023	Miscanthus Rhizosphere	MPRDGAIIFADLIGKLDMLRVTCEKCDREGSYRVNGLIGTRGDGKIIDWLDELT
Ga0207674_121216911	3300026116	Corn Rhizosphere	MARDGAIIFSDLVGKLDVLQVAYEKCGRDGRYILARLIRNRGRDAKLIDWLDELTAECPKKIARNPVSASR
Ga0256821_10081341	3300026452	Sediment	MPRDGTILFSDLIGKLDLLRVRCEKCGRDGCYGLSRLIDKRGRDAKVIDWLDEL
Ga0209973_10240022	3300027252	Arabidopsis Thaliana Rhizosphere	MPRDGAIIFADLIGKLDVLRVHCDKCERDGCYGLSRLIHKRGRDGKVIDWLDELTAEVPEEDRVQYE
Ga0209465_101640492	3300027874	Tropical Forest Soil	MKTRPGDGAIIFSDLIGKLDLLRVCCDKCGRDGCYELIDKLGRDGKIID
Ga0247818_106670062	3300028589	Soil	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPD
Ga0307293_101687311	3300028711	Soil	MPRDGAIIFADLIGKADLVRVACEKCGRDGSFRLHRLIEDRGRDAKLIDWLDELTATCPKKIA
Ga0307303_101403961	3300028713	Soil	MPRDGAIIFSDLIGKLDLLRVACDKCERDGCYGLHRLIEERGRDAKLIDWLDELI
Ga0307290_101144891	3300028791	Soil	MIVAMPRDGAIIFSDLIGKLDVLRVACEKCGRDGSYRLNALIEKRGRDAKLIDWLDEIATDLR
Ga0307299_103212962	3300028793	Soil	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDAKLIDWLDELTAECP
Ga0307299_103306242	3300028793	Soil	MIVAMCCDGAIIFRRVIGKPDLLRVACDKCGPDGGYDQGRLIEKRGRDAKR
Ga0307284_103065621	3300028799	Soil	MPRDGAIIFSDLIGKLDLLRVACDKCERDGCYGLHRLIEERGRDAKLIDWLDELIAECPK
Ga0307305_100028649	3300028807	Soil	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDA
Ga0307292_105310822	3300028811	Soil	MPRDGAIIFSDLIGKLDVLRVACAKCGRDGSYRLDALIEKRGRDAKLIDWLDELTAECPRRLR
Ga0307296_100816164	3300028819	Soil	MIVAVCCDGAIIFRRVIGKPDLLRVACDKCGPDGGYDQGRLIEKRGRDAKRIDWLDDVTAECRRRLHTYQ
Ga0307304_103133921	3300028885	Soil	MIVAMPRDGAIIFSDLIGKLDVLRVACEKCGRDGSYRLNALIEKRGRDAK
Ga0075383_110799352	3300030966	Soil	MPRDGAIIFGDIVGKLGVLHVSCEKCGRDGHYILARLIRKRGRNAKIIDW
Ga0307499_102775701	3300031184	Soil	MSGMPCDGATLFSDLIGKLDVLRVVCSKCERGGGYGLAARKDVV
Ga0307495_100606221	3300031199	Soil	MPRDGPIIFGDLTGKLDMLRVSCEKRGRDGCYGLGRLIEKRGRDAELTDWLDEITAECPK
Ga0307497_101060352	3300031226	Soil	MPRDGATIFSDLIGKLVLLRVACDKCGRDGCYGLYRIIEKRGRDAKPIDWLDELTAECPKKIAHT
Ga0307497_101409513	3300031226	Soil	MPRDGGDLTGKLGVLRVSCKKCGRDGRYILARFIRNSGRDAKLIDWLDELTAEYPKKIAHNT
Ga0307497_101726893	3300031226	Soil	MPRDGAIIFGDLIGKLDMLRVSCEKRGRDGCYGLGRLIEKRGRDAELTDWLDEITAECPK
Ga0308194_100213413	3300031421	Soil	MPRDGAIIFADLIGKLDLLRVACDKCGRDGCYGLNRLIKRRGRDAKLVDWLDEIT
Ga0170819_174377861	3300031469	Forest Soil	IASLFSASALRPMPRDGGDLTGKLGMLRVSCKKCGRDGRYILARLIRNSGRDAKLIDWLDELTAEYPKKIAHNT
Ga0318541_101381862	3300031545	Soil	MLSNGAIIFGDLIGKVDRLRVSCEKCGRDGCYGLAKLIDKRGRDRKLVYWPES
Ga0318538_103392001	3300031546	Soil	MKTRPGDGAIIFSDLIGKLDLLRVCCDKCGRDGCYELIDKLGRDGKII
Ga0310915_102377291	3300031573	Soil	MAENLMPRDGAIIFVDLIGKLDVLRVSCDKCGRDGCYGLAKLIDKRGRHGKIVDWLEELTADCPKKKSL
Ga0306917_101915181	3300031719	Soil	AIVFGDLIGKLDMLRVSCEKCGRDGRYGLAKLIDKRGRDGKLPTGAS
Ga0306917_108624642	3300031719	Soil	MPRDGAIVFGDLIGKLDMLRVSCEKCGRDGRYGLAKLIDKRGRDGKLVDWL
Ga0306918_102697591	3300031744	Soil	LSNGAIIFGDLIGKVDRLRVSCEKCGRDGCYGLAKLIDKRGRDRKLVYWPES
Ga0318546_103834002	3300031771	Soil	MLSNGAIIFGDLIGKVDRLRVSCEKCGRDGCYGLARLIDKRGRDRKLVYWPES
Ga0318557_103916672	3300031795	Soil	MLSNGAIIFGDLIGKVDRLRVSCEKCGRDGCYGLAKLIDKRGRDRE
Ga0318568_105471082	3300031819	Soil	MIVAMPRDDAIIFSDLIGKLDMLRVARHKCGRDGCYGLAKLIDKRGRDRKLVYWPES
Ga0310904_101846063	3300031854	Soil	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPDWLNDVAAG
Ga0306919_100577424	3300031879	Soil	MPRDGAIVFGDLIGKLDMLRVSCEKCGRDGRYGLAKLIDKRGRDGKLPTGAS
Ga0318551_109474551	3300031896	Soil	MPRDGAIVFGDLIGKLDMLRVSCEKCGRDDRYGLAKLIYKRGRDGKLPTGAS
Ga0318530_102947861	3300031959	Soil	MKTRPGDGAIIFSDLIGKLDLLRVCCDKCGRDGCYELIDKLG
Ga0310906_114203951	3300032013	Soil	MPRDGAIIFSDLIGKLDLLRAACDKCGRDGCYGLSRLINKRGRDAKLVDWLDEVTAD
Ga0318540_101151822	3300032094	Soil	TRVMPRDGAIVFGDLIGKLDMLRVSCEKCGRDGRYGLAKLIDKRGRDGKLPTGAS
Ga0310889_101613631	3300032179	Soil	MPRDGAIIFSGLIGKLDLLRVRCEKCGRDGCYGLAKLIDKRGRDAKLIDWVDELTGDCPKKLTR
Ga0307472_1000270572	3300032205	Hardwood Forest Soil	MPRDGAIIFSDLLGKLDSLRVACTKCGRDGRYQVQRLINDRGRDAKLIDWLGEITAGCPKKNQRTI
Ga0306920_1001075892	3300032261	Soil	MPRDGAIVFGDLIGKLDMLRVSCEKCGRDRRYGLAKLIDKRGRDGKLPTGAS
Ga0335080_110423863	3300032828	Soil	MPRDGAITFGDLIGKLDALRVICEKCGRDGHYMLIRLIRKRGRDVKIIDWLDELTAACPKKIAR
Ga0318519_100265825	3300033290	Soil	VPRDGAIVFGDLIGKLDVLRVSCDKCGRDGCCGLAKLIDKRGRDGKLVDWLDELTGDCPKKKSLLN
Ga0310810_100619694	3300033412	Soil	MPRGGATVFSDLISKLDVLRVSCSKCDRDGCYGLSRLINQRGRDAKLIDWLDIY
Ga0326726_106792012	3300033433	Peat Soil	MPRDGAIILSDLIAKLDVLRVACDKCGRDGSYGLARLINQRGRDAKLIDWLDELTAECPKKMAHNT
Ga0326723_0317829_33_245	3300034090	Peat Soil	MPRDGAIIFADLIGKLDVLRVACEKCGRDGCYGLSRLIDKRGSDAKVIDWLDELPAVCHPMRHRYFDQLW
Ga0373959_0194059_343_531	3300034820	Rhizosphere Soil	MPRDGAIIFSDLIGKLDLLRVRCDKCGRDGRYRLPRLILDRGADTKLPDWLNDVAAGRPKRHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095571

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences