Basic Information | |
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Family ID | F095570 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 105 |
Average Sequence Length | 60 residues |
Representative Sequence | TEYLYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Eukaryota |
% of genes with valid RBS motifs | 1.90 % |
% of genes near scaffold ends (potentially truncated) | 83.81 % |
% of genes from short scaffolds (< 2000 bps) | 100.00 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.34 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Eukaryota (100.000 % of family members) |
NCBI Taxonomy ID | 2759 |
Taxonomy | All Organisms → cellular organisms → Eukaryota |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (20.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (51.429 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (63.810 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.34 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Lake Marine Seawater Seawater Marine Aqueous Seawater Estuarine Salt Marsh Marine Seawater Soil Forest Soil Delisea Pulchra Activated Sludge Activated Sludge Lab-Scale Ebpr Bioreactor Enhanced Biological Phosphorus Removal Bioreactor Wastewater Effluent Surface Ocean Water Ice Edge, Mcmurdo Sound, Antarctica Polar Marine |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
BIB12012_101391741 | 3300002037 | Delisea Pulchra | MTEYLYDRDNPKSNLRQKLTGVEGMLYGVPNLNERAEMINRSLLKHTDGDITKWVQQTQKPRDEA* |
Ga0007751_108557711 | 3300004794 | Freshwater Lake | LYDRENPKSHLRQRLTGIEGLMYGVPNINERADMIGRALAKETDGDFAKFILNTKKPRDNA* |
Ga0007756_115615841 | 3300004795 | Freshwater Lake | EYLYDRENPKSHLRQRLTGIEGLMYGVPNINERADMIGRALAKETDGDFAKFILNTKKPRDNA* |
Ga0074427_1068511 | 3300005678 | Lab-Scale Ebpr Bioreactor | IIMTEYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0074435_1150381 | 3300005686 | Lab-Scale Ebpr Bioreactor | LYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0074437_1006372 | 3300005688 | Lab-Scale Ebpr Bioreactor | PKTPFQFNIIIMTEYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0074438_10112141 | 3300005689 | Lab-Scale Ebpr Bioreactor | DSIMTEYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0075160_103814392 | 3300005988 | Wastewater Effluent | SLIIIIMTEYLYDRDNPKSPLRQRLTGIEGFFYGLPNINERAEMVNRALLRENDNDITKFVMQLKKPRDNA* |
Ga0075465_101002491 | 3300006037 | Aqueous | LFNVDIIINKMTEYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGDFGKFV* |
Ga0075163_111079573 | 3300006056 | Wastewater Effluent | PKPQNPKTPKPLSTLYIIIMTEYLYD*DNPKSSLRQRITGVEGFYYGLPNINERAEMVNRALLREYDNDVTKFANMLKKPRDEA* |
Ga0075163_112167111 | 3300006056 | Wastewater Effluent | PKTPKPQNPKTPFQFNIIIMTEYLYD*ENPKSNLRQKLTGIEGFFYGLPNINERAEMVNRALLKDNDNDVTKFMMQLKKPRDNA* |
Ga0075501_12412221 | 3300006355 | Aqueous | YDRENPKSHLRQRLTGIEGLMYGNPNHNERVEMIGRALAKETDGDFTKFVNKT* |
Ga0075498_13466572 | 3300006378 | Aqueous | YDRENPKSHLRQRLTGIEGLFHGVPNINERADMIGRALAKETDGDFGKFVENMKKPQDEA |
Ga0075506_17016642 | 3300006401 | Aqueous | YDRENPKSRLRQRITGIETIMRGTPNINERADMIGRALAKQTDGDWTKFVQNQKKP* |
Ga0069787_105348041 | 3300006417 | Enhanced Biological Phosphorus Removal Bioreactor | EYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0075471_102919972 | 3300006641 | Aqueous | MTEYLYDRENPKSHLRQRLTGVEGFFWGNPNINERAEMVYRALAKETDGEITKFVQKTAKPRDNA* |
Ga0075471_103300812 | 3300006641 | Aqueous | MTEYLYDRENPKSHLRQRLTGIEGLMYGNPNHNERVEMIGRALAKETDGDFTKFVNKT* |
Ga0075467_103144192 | 3300006803 | Aqueous | MTEYLYDRENPKSHFRQRLTGIEGLMHGNPNMNERADMIGRALAKETDGDFTKFVAKTAKPRDMA* |
Ga0075473_101925301 | 3300006875 | Aqueous | MTEYLYDRENPKSHLRQRLTGIEGLFHGVPNINERADMIGRALAKETDGDFGKFVENMKKPQDEA* |
Ga0105019_12575472 | 3300007513 | Marine | MTEYLYDRENPKSHFRDRLTGIEGLMYGNPNMAERADMIGRALAKDTDGDFTKFVMKTGKPRDDA* |
Ga0102867_10899462 | 3300007716 | Estuarine | MTEYLYDRENPKSHFRQRLTGIEGLMYGNPNMNERADMIGRALAKETDGDFTKFVAKTAKPRDMAQK* |
Ga0103873_10620601 | 3300009265 | Surface Ocean Water | EYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVTQMKKP* |
Ga0103742_10234812 | 3300009402 | Ice Edge, Mcmurdo Sound, Antarctica | MTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV* |
Ga0115103_15305201 | 3300009599 | Marine | YDRDNPKSALRQKSTGIEGFFYGVPNINERADMIGRSLAKHTDGDFTKFVDE* |
Ga0115103_16820793 | 3300009599 | Marine | EYLYDRENPKSALQTKGIGIEGFMYGNPNMMERADMIGRALAKDTDGDFTKFVQKTNKPRDEA* |
Ga0115103_16836011 | 3300009599 | Marine | EYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVQQMKKP* |
Ga0115102_101874781 | 3300009606 | Marine | LYDRENPKSNFRQRLTGIEGLMYGNPNMNERADMIGRALAKETDGDYTKFVTRT* |
Ga0115102_104071421 | 3300009606 | Marine | YDRDNPKSHFRQRTTGIEGLFFGVPNINERADMIGRALAKETDGDFAKFVNNTKKPRDNA |
Ga0115100_108281651 | 3300009608 | Marine | DRDNPKSHFRQRTTGIEGLFFGVPNINERADMIGRALAKETDGDFAKFVNNTKKPRDNA* |
Ga0115104_108421182 | 3300009677 | Marine | KSRLRERITGIETLMRGVPNIHERADMIGRALARDTDGDWTKFVQNTKKP* |
Ga0129319_10449393 | 3300010307 | Aqueous | TEYLYDRDNAKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGDFGKFVLNTKKPRDNA* |
Ga0138316_108700041 | 3300010981 | Marine | TEYLYDRENPKSHFRQRLLGIEGFFFGNPNTNERADMIGRALAKGTDGDFTKFVMKT* |
Ga0138266_11975651 | 3300012412 | Polar Marine | MTEYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGEFSKFVD* |
Ga0138264_17347261 | 3300012414 | Polar Marine | TEYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGEFSKFVD* |
Ga0138259_15029482 | 3300012416 | Polar Marine | NMTEYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGEFSKFVD* |
Ga0138262_13896292 | 3300012417 | Polar Marine | SNMTEYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGEFSKFVD* |
Ga0129334_10859891 | 3300012471 | Aqueous | DRDNPKSAFHQRTTGIEGLFYGLPNMNERADMIARALVRETDGDFTKFV* |
Ga0138257_11182242 | 3300012935 | Polar Marine | LGYLYDRENPKSHLRQRLTGIEGLFYGVPNINERADMIGRALAKETDGEFSKFVD* |
Ga0119927_1101571 | 3300013282 | Activated Sludge | PQNPKTPFQFNIIIMTEYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0119916_1047782 | 3300013289 | Activated Sludge | IMTEYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA* |
Ga0181379_13370671 | 3300017783 | Seawater | KMTEYLYDRENPKSHFRQRLMGIEGMMYGLPNMNERAEMIGRALAKETDGDFTKFVMKTQKPRDEA |
Ga0193355_10129641 | 3300018628 | Marine | HGDNIKMTEYLYDRSNPKSALQTRGSGIEGFMYGTPNLNERADMIGRALSKETDGDFSKFVARTNKPRDDA |
Ga0192967_10342241 | 3300018730 | Marine | TWGLINLIKKMTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0193253_10901351 | 3300018846 | Marine | TEYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVQQMKKP |
Ga0192894_101133982 | 3300018968 | Marine | MTEYLYDRENPKSNFRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVMRTAKPRDMA |
Ga0193254_100848383 | 3300018976 | Marine | STEYLYDRDNPKSALRQRGTGIEGFMYGVPNINERADMIGRALAKQTDGDFTKFVDDLNKPRDNA |
Ga0192961_101163591 | 3300018980 | Marine | MTEYLYDRENPKSKLRQRITGIETLMRGVPNINERADMVARSLAKETDGDWAKFVQNQKK |
Ga0192947_101289161 | 3300018982 | Marine | MTEYLYDRENPKSHFRQRLTGIEGLMYGNPNMNERADMIGRALAKETDGDFTKFVARTQKPRDMA |
Ga0193030_101315731 | 3300018989 | Marine | MTEYLYDRENPKSNFRQRLTGIEGLMYGNPNMNERAVMIHRALHKQCDGDYQKFVNTMAKPRDMA |
Ga0193257_101301451 | 3300018997 | Marine | IKMSTEYLYDRDNPKSALRQRGTGIEGFMYGVPNINERADMIGRALAKQTDGDFTKFVDDLNKPRDNA |
Ga0193569_102374551 | 3300019017 | Marine | TEYLYDRDNPKSVMRQRLTGIEGFMYGVPNINERADMIGRALAKDTDGDFFKFVNNAKKPRDNA |
Ga0192951_101787602 | 3300019022 | Marine | MTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0192869_102157482 | 3300019032 | Marine | HGNLYLIINMTEYLYDRDCPKSNFRQRLTGIEGLMYGNPNMNERTDMIARALCKETDGDL |
Ga0192981_101888552 | 3300019048 | Marine | MTEYLYDRENPKSHLRQRLTGIEGFMHGNPNMNERADMIGRALAKDTDGDYTKFVLRT |
Ga0192966_101786581 | 3300019050 | Marine | TWGLLINLIKKMTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0188866_10207012 | 3300019095 | Freshwater Lake | ENPKSNFRQRLTGIEGFFYGNPNMMERADMIGRALAKETDGDFGKMVGKT |
Ga0182068_13013632 | 3300019280 | Salt Marsh | TEYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVTQMKKP |
Ga0206687_16888071 | 3300021169 | Seawater | EYLYDRENPKSKLRQQITGIETMLRGVPNINERADMIGRALAKETDGDWTKFVQA |
Ga0210308_10026623 | 3300021303 | Estuarine | TEYLYDRENPKSHLRQRLTGIEGLFHGVPNINERADMIGRALAKETDGDFTKFV |
Ga0206692_13523182 | 3300021350 | Seawater | YLYDRENPKSKLRQQITGIETMLRGVPNINERADMIGRALAKETDGDWTKFVQA |
Ga0206692_15687732 | 3300021350 | Seawater | MTEYLYDREHPKSNFRQRLTGIEGLMWGNPNMNERADMIGRALAKETDGDFTKFVTKT |
Ga0206692_18944341 | 3300021350 | Seawater | MTEYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVQQMKK |
Ga0063146_1272781 | 3300021875 | Marine | TEYLYDRENPKSNFRQRLTGIEGFFYGNPNMMERADMIGRALAKETDGDFGKMVGKT |
Ga0063086_10119511 | 3300021902 | Marine | MTEYLYDRENPKSHMRQRLTGMEGFMYGNPNMNERADMIGRALAKETDGDFSKFVLRT |
Ga0063096_10113401 | 3300021925 | Marine | XKMTEYLYDRENPKSHLRQRMTGIEGFMFGNPNMNERADMIGRALAKETDGDFTKFVLRTAKPRDMA |
Ga0063102_10528921 | 3300021941 | Marine | TEYLYDRENPKSHMRQRLTGMEGFMYGNPNMNERADMIGRALAKETDGDFSKFVLRT |
Ga0063101_10874051 | 3300021950 | Marine | EYLYDRENPKSHMRQRLTGMEGFMYGNPNMNERADMIGRALAKETDGDFSKFVLRT |
Ga0063101_11336871 | 3300021950 | Marine | LYDRNNPKSHLRERLTGIEGFMYGNPNMYERADMIGRSLAKEADGDISKWV |
Ga0232122_10848231 | 3300023709 | Salt Marsh | EYLYDRENPKSHFRQRLTGIEGLYYGVPNINERADMIGRALAKQTDGDFAKFV |
Ga0208784_11100132 | 3300025732 | Aqueous | MTEYLYDRENPKSHLRQRLTGIEGLFHGVPNINERADMIGRALAKETDGDFGKFVENMKKPQDEA |
Ga0247594_10433452 | 3300026448 | Seawater | FEYKMTEYLYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Ga0247592_11808721 | 3300026500 | Seawater | YLYDRENPKSNFRQRLTGIEGFFYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Ga0247590_11966611 | 3300026513 | Seawater | YLYDRENPKSNFRQRLTGIEGLMYGNPNMNERADMIGRALAKETDGDYTKFVTRT |
Ga0247596_10947052 | 3300028106 | Seawater | TEYLYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Ga0256412_11942251 | 3300028137 | Seawater | LYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Ga0256412_12470461 | 3300028137 | Seawater | YLYDRDNPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVQQMKKP |
Ga0256412_12987901 | 3300028137 | Seawater | MTEYLYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRT |
Ga0256417_11398141 | 3300028233 | Seawater | NPKSHFRQRLMGIEGMMYGLPNMNERAEMIGRALAKETDGDFTKFVMKT |
Ga0247572_11391401 | 3300028290 | Seawater | YKMTEYLYDRENPKSHMRQRLTGIEGFMYGNPNMNERADMIGRALAKETDGDFTKFVLRTQKPRDMA |
Ga0304731_116588351 | 3300028575 | Marine | TEYLYDRENPKSHFRQRLLGIEGFFFGNPNTNERADMIGRALAKGTDGDFTKFVMKT |
Ga0272412_13155202 | 3300028647 | Activated Sludge | EYLYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDNA |
Ga0119925_1079281 | 3300029936 | Activated Sludge | LYDRDNPKSALRQRITGIEGFFYGLPNINERAEMVNRALLKENDNDITKFANQLKKPRDN |
Ga0210256_102159991 | 3300030564 | Soil | ITIKMTEYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRALAKETDGDFGKFVTTTRKPRDMA |
Ga0247650_11592671 | 3300030601 | Soil | TEYLYDRDNPKSHFRQRITGIQSLFYGVPNINERVDMIGRALAKDTDGDFGKFVFTTRKPRDMA |
Ga0247627_101045121 | 3300030635 | Soil | EYLYDRDNPKSHFRQRITGIEGLFYGVPNINERADMIGRSLAKLTDGDFGKFVNTTRKPRDTA |
Ga0307401_102708151 | 3300030670 | Marine | KKMTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0307400_105419903 | 3300030709 | Marine | TEYLYDRENPKSHLRQRLTGIEGFMHGNPNMNERADMIGRALAKDTDGDYTKFVLRT |
Ga0307400_106638921 | 3300030709 | Marine | LIKKMTEYLYDRNNPKSHLRERQTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0265459_111535221 | 3300030741 | Soil | EIITIKMTEYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRALAKETDGDFGKFVTTTRKPRDMA |
Ga0265459_117373001 | 3300030741 | Soil | TEYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRSLAKETDGDFGKFILSTRKPRDNA |
Ga0265459_140115621 | 3300030741 | Soil | KSHFRQRISGIQSLFYGVPNINERADMISRSLAKETDGDFGKFVASTRKPRDNA |
Ga0265461_110122942 | 3300030743 | Soil | TEYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRALAKETDGDFGKFVTTTRKPRDMA |
Ga0073964_111090792 | 3300030788 | Marine | YDRSNPKSGLQTRGSGIEGFMYGTPNLNERADMIGRALAKETDGDFAKFVNKTGKPRDEA |
Ga0138296_16270051 | 3300030923 | Soil | EYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRSLAKETDGDFAKFVQTTRKPRDMA |
Ga0073974_16803212 | 3300031005 | Marine | EYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVANMKKP |
Ga0073978_14888001 | 3300031036 | Marine | MTEYLYDRENPKSRLRERITGIETIMRGVPNIHERADMIGRALAKDTDGDFTKFVANMKK |
Ga0074028_112518741 | 3300031050 | Soil | EYLYDRDNPKSHFRQRISGIQGLFYGVPNINERADMIGRALAKETDGDFTKFVMATRKPRDYA |
Ga0170819_171556531 | 3300031469 | Forest Soil | PKSHFRQRITGIQSLFYGVPNINERADMICRALAKETDGDLGKFVNTLKKPRDMA |
Ga0307388_108791401 | 3300031522 | Marine | KMTEYLYDRNNPKSHLRERLTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0308134_10831921 | 3300031579 | Marine | LYDRENPKSHLRQRMTGIEGFMFGNPNMNERADMIGRALAKETDGDFTKFVLRTAKPRDM |
Ga0307391_105070861 | 3300031729 | Marine | KMTEYLYDRNNPKSHLRERQTGIEGFMYGNPNMHERAEMVGRSLAKEADGDISKWV |
Ga0307391_107324461 | 3300031729 | Marine | DRENPKSKLRQRITGIETLMRGVPNINERADMVARSLAKETDGDWAKFVQNQKKP |
Ga0314675_103619972 | 3300032491 | Seawater | YDRENPKSKLRQQITGIETMLRGVPNINERADMIGRALAKETDGDWTKFVQA |
Ga0314699_103040541 | 3300032730 | Seawater | NMTEYLYDRENPKSNFRQRLTGIEGFFYGNPNMMERADMIGRALAKETDGDFGKMVGKT |
Ga0314714_106377602 | 3300032733 | Seawater | EYLYDRENPKSALRTRGTGIEGFFYGNPNMMERAEMVGRALAKDADGDFGKFV |
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