Metagenome / Metatranscriptome Family F095561

Basic Information
Family ID	F095561
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	45 residues
Representative Sequence	GNYFKLNLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEK
Number of Associated Samples	92
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (81.905 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (44.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.429 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 12224059787 2DelMOSum2010_101450252 3BBAY92_101625301 4GOS2243_10804451 5Ga0078893_117392321 6Ga0075502_14863132 7Ga0070744_102086331 8Ga0098055_10013451 9Ga0098055_10014341 10Ga0102855_11684872 11Ga0102825_11190651 12Ga0102825_11375791 13Ga0105737_10738041 14Ga0105737_11665351 15Ga0105738_10077511 16Ga0105740_11015862 17Ga0105748_105079512 18Ga0102811_11902192 19Ga0102830_11184552 20Ga0115552_13351851 21Ga0114980_104260982 22Ga0114997_106926642 23Ga0115008_105101242 24Ga0115563_12238291 25Ga0115557_13894482 26Ga0115553_10158754 27Ga0181391_11178161 28Ga0181390_10079594 29Ga0181373_10883481 30Ga0181431_10097361 31Ga0181402_11804792 32Ga0181389_11179512 33Ga0181410_11502651 34Ga0181385_10460911 35Ga0181386_12401841 36Ga0181395_10329481 37Ga0181423_10749701 38Ga0181552_106135512 39Ga0181581_100719591 40Ga0181585_101094141 41Ga0181576_100375901 42Ga0181576_102268851 43Ga0181576_103295482 44Ga0181569_101881261 45Ga0181559_100381681 46Ga0181558_101272353 47Ga0181563_101542583 48Ga0181563_107770062 49Ga0181591_105162801 50Ga0181566_109254121 51Ga0181568_104209532 52Ga0181564_100140624 53Ga0211658_10448761 54Ga0211504_11482472 55Ga0211532_102003993 56Ga0211659_102150582 57Ga0211558_101897341 58Ga0211643_102360262 59Ga0206692_13452301 60Ga0222718_103662522 61Ga0222715_104042642 62Ga0255771_10669853 63Ga0255762_102710981 64Ga0255761_100890961 65Ga0255766_101519552 66Ga0255766_104750902 67Ga0255772_100214854 68Ga0255772_103088472 69Ga0255759_105092742 70Ga0255768_101141821 71Ga0228667_10991842 72Ga0233399_10732162 73Ga0228653_10314271 74Ga0228623_10798962 75Ga0228629_11321841 76Ga0228672_10155251 77Ga0244775_111257712 78Ga0244775_115649761 79Ga0244776_101084371 80Ga0255142_10751531 81Ga0255144_10553532 82Ga0208157_11265221 83Ga0208793_10023261 84Ga0208793_10100551 85Ga0209535_12129892 86Ga0209136_10735122 87Ga0209136_11040692 88Ga0209198_11567651 89Ga0209771_10387111 90Ga0209771_11639372 91Ga0209602_10489233 92Ga0208899_11441042 93Ga0208767_11837061 94Ga0209555_100733793 95Ga0209555_103899901 96Ga0208949_10485572 97Ga0208923_10585501 98Ga0209071_10518781 99Ga0247582_11879941 100Ga0228649_11475782 101Ga0308001_101605811 102Ga0307997_101704162 103Ga0315322_106412941 104Ga0308000_102371812 105Ga0310130_0143304_19_168
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 12224059787 2DelMOSum2010_101450252 3GOS2243_10804451 4Ga0098055_10013451 5Ga0102855_11684872 6Ga0102825_11375791 7Ga0105737_10738041 8Ga0105740_11015862 9Ga0102811_11902192 10Ga0102830_11184552 11Ga0181431_10097361 12Ga0181402_11804792 13Ga0181385_10460911 14Ga0181564_100140624 15Ga0206692_13452301 16Ga0233399_10732162 17Ga0244775_115649761 18Ga0255142_10751531 19Ga0255144_10553532 20Ga0208157_11265221
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0208793_10100551 22224059787 3DelMOSum2010_101450252 4BBAY92_101625301 5Ga0070744_102086331 6Ga0102825_11375791 7Ga0102811_11902192 8Ga0114980_104260982 9Ga0115008_105101242 10Ga0181431_10097361 11Ga0181402_11804792 12Ga0181385_10460911 13Ga0181581_100719591 14Ga0181566_109254121 15Ga0181568_104209532 16Ga0181564_100140624 17Ga0211659_102150582 18Ga0211558_101897341 19Ga0211643_102360262 20Ga0206692_13452301 21Ga0222715_104042642 22Ga0255762_102710981 23Ga0255772_100214854 24Ga0244775_115649761 25Ga0255144_10553532 26Ga0307997_101704162
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.54% Coil/Unstructured: 77.46%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03567	Sulfotransfer_2	0.95
PF01807	zf-CHC2	0.95
PF02183	HALZ	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	18.10 %
Unclassified	root	N/A	81.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.90 %
Unclassified	root	N/A	81.90 %
Viruses	superkingdom	All Organisms → Viruses	16.19 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.95 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.95 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.95 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.95 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.95 %
Candidatus Dadabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria	0.95 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.95 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.95 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.95 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.24 %
Unclassified	root	N/A	81.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.95 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084006\|2223606661	Not Available	535	Open in IMG/M
3300000101\|DelMOSum2010_c10145025	Not Available	882	Open in IMG/M
3300000947\|BBAY92_10162530	Not Available	585	Open in IMG/M
3300001965\|GOS2243_1080445	All Organisms → Viruses → Predicted Viral	1743	Open in IMG/M
3300005837\|Ga0078893_11739232	Not Available	759	Open in IMG/M
3300006357\|Ga0075502_1486313	All Organisms → Viruses → Predicted Viral	1449	Open in IMG/M
3300006484\|Ga0070744_10208633	Not Available	555	Open in IMG/M
3300006793\|Ga0098055_1001345	Not Available	13414	Open in IMG/M
3300006793\|Ga0098055_1001434	Not Available	12966	Open in IMG/M
3300007647\|Ga0102855_1168487	Not Available	585	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	0.95%
Aquatic	Environmental → Aquatic	98.10%
Terrestrial	Environmental → Terrestrial	0.95%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.95%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Green Algae	Host-Associated → Algae → Green Algae	0.95%
Marine	Environmental → Aquatic → Marine	95.24%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	16.19%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.95%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	38.10%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.95%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.48%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.71%
River	Environmental → Aquatic → Freshwater → River	1.90%
Strait	Environmental → Aquatic → Marine → Strait	9.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.67%
Oil-Contaminated	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated	0.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	22.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.86%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.67%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.86%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.90%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	4.76%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.95%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.95%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.95%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.57%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.62%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine	0.95%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.95%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.95%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.71%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	22.86%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.52%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.62%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.95%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084006	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - oil_dispersant_7	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006357	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2224059787	2222084006	Marine	VSCDSNGNYFKLNLTNFETERDYYIEVKTERNGVIEYFSDKDLTFTVER
DelMOSum2010_101450252	3300000101	Marine	GEVVVPFNDDFTKVSCDSKGNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFIDKDLTFTVEK*
BBAY92_101625301	3300000947	Macroalgal Surface	EEVVVPFNDDFTKVSCDANGNYFKLNLTNFESNRDYYIEIKTVRDGVIEYFGDKDLTFTVEV*
GOS2243_10804451	3300001965	Marine	LTNWEYNRDYYIQIKVERGGVIEYFEDRDLTFTIEK*
Ga0078893_117392321	3300005837	Marine Surface Water	CDANGNYFKLNLTNFESNRDYYIEIKTVRDGVIEYFGDKDLTFTVEV*
Ga0075502_14863132	3300006357	Aqueous	VPFSDEYTKVSCDSNGNYFKLNLSNFEYNRDYYIEIKVNRNGVIEYFTDKELTFTVEK*
Ga0070744_102086331	3300006484	Estuarine	CDSNGNFFKLNLSNWETNREYYIEIKVDRDGVIEYFSDKDLTFTVEK*
Ga0098055_10013451	3300006793	Marine	NYFKLNLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEK*
Ga0098055_10014341	3300006793	Marine	NYFKLNLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEL*
Ga0102855_11684872	3300007647	Estuarine	FFKLNLANWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL*
Ga0102825_11190651	3300007655	Estuarine	NGNYFNLNLTNFEYNRDYYIEIKTVRSGVVEYFVDKDLTFTVEK*
Ga0102825_11375791	3300007655	Estuarine	KVSCDSNGNYFKLNLKNWEINRDYYIEIKIDRDGVIEYFEDRDLTFTIEK*
Ga0105737_10738041	3300007862	Estuary Water	NNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK*
Ga0105737_11665351	3300007862	Estuary Water	NLTNWEYNRDYYIEIKIDRDGVIEYFEDKDLTFTIEK*
Ga0105738_10077511	3300007953	Estuary Water	VIGNYFKLNLNNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK*
Ga0105740_11015862	3300007955	Estuary Water	IVTGEVVVPFDDNYTKVSCDANGHFFKLNLANWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL*
Ga0105748_105079512	3300007992	Estuary Water	TNWEYNRDYYIQIKTNRDGVIEYFDDKDLTFTIEK*
Ga0102811_11902192	3300009024	Estuarine	LKNWETNRSYYIEIKTDRNGVVEYFLDDKLTFTVEK*
Ga0102830_11184552	3300009059	Estuarine	KLNLTNWETNRSYYVEIKIDRSGVIEYFSDKDLTFTIEK*
Ga0115552_13351851	3300009077	Pelagic Marine	SCDSNGNYFKLNLSNFEYNRDYYIEIKVNRNGVIEYFTDKELTFTVEK*
Ga0114980_104260982	3300009152	Freshwater Lake	DGNYFKLNLTNWETNRSYYIEIKIDRSGVIEYFSDKDLTFTIEK*
Ga0114997_106926642	3300009425	Marine	KLNLTNWEINRDYYIEIKINRNGVVEYFEDKDLTFTVEM*
Ga0115008_105101242	3300009436	Marine	FNDNYTKVSCDSIGNYFKLDLSNFEYNRDYFIEIKTVRSGIVEYFSDKELTFTVEK*
Ga0115563_12238291	3300009442	Pelagic Marine	IVTGEVVVPFNDDFTKVSCDSKGNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFIDKDLTFTVEK*
Ga0115557_13894482	3300009443	Pelagic Marine	NGNYFKLNLSNFEYNRDYYIEIKTNRSGVIEYFTDKDLTFTVEK*
Ga0115553_10158754	3300009445	Pelagic Marine	NFEYNRDYYIEIKTNRSGVIEYFTDKDLTFTVEK*
Ga0181391_11178161	3300017713	Seawater	NYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFSDKDLTFTVEK
Ga0181390_10079594	3300017719	Seawater	GNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFSDKDLTFTVEK
Ga0181373_10883481	3300017721	Marine	SCDSNGNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFIDKDLTFTVEK
Ga0181431_10097361	3300017735	Seawater	GIPFSNYTKVSCDSNGNYFKLNLDSWEINRNYYIEIKTNRDGVIEYFIDKELTFIVEE
Ga0181402_11804792	3300017743	Seawater	DNGNFIRLNLENWETNREYYLEIKVDRDGVVEYFSDKDLTFLVEK
Ga0181389_11179512	3300017746	Seawater	NFFKLDLTNWEYNRDYYIQIKTNRDGVIEYFDDKDLTFTIEK
Ga0181410_11502651	3300017763	Seawater	IPFNDNYTKVSCDANGNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0181385_10460911	3300017764	Seawater	VSCDSNGNFFKIDLSNFEINRDYYFEIKVDRSGEIDYFTEKDLTFTVEK
Ga0181386_12401841	3300017773	Seawater	CDANGNYFNLNLTNFEYNRDYYIEIKTVRSGVVEYFVDKDLTFTVEK
Ga0181395_10329481	3300017779	Seawater	NYFKLNLTNWEYNRDYYIEIKIDRDGVIEYFEDKDLTFTIEK
Ga0181423_10749701	3300017781	Seawater	FKLNLTNWEYNRDYYIEIKIDRDGVIEYFEDKDLTFTIEK
Ga0181552_106135512	3300017824	Salt Marsh	PFSDYTKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVVEYFEDKDLTFTIEK
Ga0181581_100719591	3300017962	Salt Marsh	YFKLNLSNWEYNRDYYFEIKVDRDGVIEYFEDKDLTFTIEK
Ga0181585_101094141	3300017969	Salt Marsh	NYFKLNLTNWEYNRDYYLEIKIDRDGVIEYFTDKDLTFTVEK
Ga0181576_100375901	3300017985	Salt Marsh	TNWEYSRDYYIEIKVDRDGVIEYFEDKDLTFTIEK
Ga0181576_102268851	3300017985	Salt Marsh	NLTNWEYSRDYYIEIKVDRDGVIEYFEDKDLTFTVEK
Ga0181576_103295482	3300017985	Salt Marsh	YSKVSCDSNGNFIRLNLENWETNREYYIEIKVDRDGVVEYFSDKDLTFLVEK
Ga0181569_101881261	3300017986	Salt Marsh	GNYFKLNLTNWEYSRDYYIEIKVDRDGVIEYFEDKDLTFTVEK
Ga0181559_100381681	3300018415	Salt Marsh	TKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVVEYFEDKDLTFTIEK
Ga0181558_101272353	3300018417	Salt Marsh	CDSNGNFFKLNLSNWEYNRDYYIEIKVERDGVIEYFEDKDLTFTVEK
Ga0181563_101542583	3300018420	Salt Marsh	DSNGNFFKLNLKNWETLRDYYLEIKVERDGVIEYFEDKDLTFTVEK
Ga0181563_107770062	3300018420	Salt Marsh	VVVPFSDDYTKVSCDSNGNYFKLNLSNFEYNRDYYIEIKVNRNGVIEYFTDKELTFTVEK
Ga0181591_105162801	3300018424	Salt Marsh	TNWEYNRDYYIQIKVDRNGVIEYFEDKDLTFTIEK
Ga0181566_109254121	3300018426	Salt Marsh	SGNFFKLNLTNFEYNRDYYIEIKTIRSGVIEYFEDKDLTFTVEK
Ga0181568_104209532	3300018428	Salt Marsh	SCDSNGNYFKLNLSNFEYNRDYYIEIKVNRSGVIEYFADKDLTFTVEK
Ga0181564_100140624	3300018876	Salt Marsh	IIPFSDYTKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVVEYFEDKDLTFTIEK
Ga0211658_10448761	3300020274	Marine	NLSNFEYNRDYYIEIKVDRSGVIEYFADKDLTFTVEK
Ga0211504_11482472	3300020347	Marine	NYFKLNLSNFEYNRDYYIEIKTNRSGVIEYFADKELTFTVEK
Ga0211532_102003993	3300020403	Marine	NLSNFEYNRDYYIEIKVNRSGVIEYFADKDLTFTVEK
Ga0211659_102150582	3300020404	Marine	SCDANGHFFKLNLQNWEINRDYYIEIKINRNGVVEYFDDKDLTFTVEL
Ga0211558_101897341	3300020439	Marine	RLENWEPNRDYYIEIKVDRDGVVEYFSDKDLTFTVES
Ga0211643_102360262	3300020457	Marine	NLTNWEPNRNYYIEIKIDRDGVIEYFADKDLTFTVER
Ga0206692_13452301	3300021350	Seawater	FNLNLINFETERDYYIEVKTERSGVIEYFADKDLTFTVER
Ga0222718_103662522	3300021958	Estuarine Water	SNFEYNRDYYIEIKTNRNGVIEYFADKELTFTVEK
Ga0222715_104042642	3300021960	Estuarine Water	GNYFKLDLTNWEYNRDYYIEIKVDRSGVVEYFEDKDLTFTIEK
Ga0255771_10669853	3300022900	Salt Marsh	SDYTKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVVEYFEDKDLTFTIEK
Ga0255762_102710981	3300023119	Salt Marsh	LNLTNWEYSRDYYIEIKVDRDGVIEYFEDKDLTFTVEK
Ga0255761_100890961	3300023170	Salt Marsh	VVVPFNDDYTKVSCDSNGNYFKLNLSNFEYNRDYYIEIKVNRSGVIEYFADKDLTFTVEK
Ga0255766_101519552	3300023172	Salt Marsh	KLNLSNFEYNRDYYIEIKVNRSGVIEYFADKDLTFTVEK
Ga0255766_104750902	3300023172	Salt Marsh	NLENWETNREYYIEIKVDRDGVVEYFSDKDLTFLVEK
Ga0255772_100214854	3300023176	Salt Marsh	SNSNFFKLDLTNWEYNRDYYIQIKVDRDGVIEYFEDKDLTFTIEK
Ga0255772_103088472	3300023176	Salt Marsh	LTNWEYNRDYYIQIKVDRNGVIEYFEDKDLTFTIEK
Ga0255759_105092742	3300023178	Salt Marsh	FKLDFNNWEYNRDYYIQIKVDRDGVIEYFEDKDLTFTIEK
Ga0255768_101141821	3300023180	Salt Marsh	GNYFKLNLTNWEYNRDYYLEIKIDRDGVIEYFTDKDLTFTVEK
Ga0228667_10991842	3300024226	Seawater	GNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0233399_10732162	3300024231	Seawater	FKLNLDSWEINRNYYIEIKTNRDGVIEYFIDKELTFIVEE
Ga0228653_10314271	3300024237	Seawater	VVPFNDNYTKVSCDAIGNYFKLNLNNFEYNRDYYIEIKTVRIGVVEYFSDKDLTFTVEK
Ga0228623_10798962	3300024267	Seawater	EVVVPFNDNYTKVSCDAIGNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFSDKDLTFTVE
Ga0228629_11321841	3300024296	Seawater	NDNYTKVSCDANGNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0228672_10155251	3300024335	Seawater	SNGNYFNLNLINFETERDYYIEVKTERSGVIEYFADKDLTFTVER
Ga0244775_111257712	3300024346	Estuarine	IPFSDYTKVSCDSNGNFFKLNLSNWETNREYYIEIQVDRDGVIEYFSDKDLTFTVEK
Ga0244775_115649761	3300024346	Estuarine	VTDDIIVPFGDYTKVSCDVSGNYFKINLINWETNRDYYVEIKIDRDGEVEYFSDKDLTFLVEK
Ga0244776_101084371	3300024348	Estuarine	CDTNGNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0255142_10751531	3300024352	Freshwater	NQWETNREYYIEIKVEKDGEVEYFSDKDLTFLLEK
Ga0255144_10553532	3300024513	Freshwater	VVTDEIIIPFSNYSKVSCDSNGNFFKLNFNQWETNREYYIEIKVERDGEIEYFSDKDLTFLLEK
Ga0208157_11265221	3300025086	Marine	TNWEPNRNYYIEIKIDRDGVIEYFADKDLTFTVER
Ga0208793_10023261	3300025108	Marine	GNYFKLNLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEL
Ga0208793_10100551	3300025108	Marine	GNYFKLNLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEK
Ga0209535_12129892	3300025120	Marine	YFKLNLTNWEYNRDYYIEIKIDRDGVIEYFEDKDLTFTIEK
Ga0209136_10735122	3300025636	Marine	ANGHFFKLNLTNWEINRDYYIETKINRNGVVEYFEDRDLTFTVEL
Ga0209136_11040692	3300025636	Marine	IIPFSDYTKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVIEYFEDKDLTFTIEK
Ga0209198_11567651	3300025640	Pelagic Marine	LNNFEYNRDYYIEIKTVRSGVVEYFIDKDLTFTVEK
Ga0209771_10387111	3300025701	Marine	CDSNGNFFKLNLKNWETERDYFIEIKVERDGVVEYFEDRDLTFTIEKQ
Ga0209771_11639372	3300025701	Marine	NGHFFKLNLTNWEINRDYYIEIKINRNGVIEYFEDKDLTFTVEL
Ga0209602_10489233	3300025704	Pelagic Marine	NLTNWEYNRDYYIEIKTDRDGVVEYFVDKDLTFTVEK
Ga0208899_11441042	3300025759	Aqueous	KVSCDSTGNYFKLNLDSWEINRNYYIEIKTNRDGVIEYFIDKELTFIVEE
Ga0208767_11837061	3300025769	Aqueous	SCDSTGNYFKLNLDSWEINRNYYIEIKTNRDGVIEYFIDKELTFIVEE
Ga0209555_100733793	3300025879	Marine	TKVSCDSNGNFFKLNLKNWETQRDYYLEIKVERDGVIEYFEDKDLTFTIER
Ga0209555_103899901	3300025879	Marine	SNGNYFKLNLTNWEYSRDYYIEIKVDRDGVIEYFEDKDLTFTVEK
Ga0208949_10485572	3300027315	Marine	TKVSCDANGNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0208923_10585501	3300027320	Estuarine	YFKLNLTNWETNRSYYVEIKIDRSGVIEYFSDKDLTFTIEK
Ga0209071_10518781	3300027686	Marine	FFKLNLTNWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL
Ga0247582_11879941	3300028109	Seawater	GNYFKLNLTNWEYNRDYYLEIKIDRDGVVEYFVDKDLTFTVEK
Ga0228649_11475782	3300028132	Seawater	AIGNYFKLNLNNFEYNRDYYIEIKTVRSGVVEYFSDKDLTFTVEK
Ga0308001_101605811	3300031644	Marine	GHFFKLNLTNWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL
Ga0307997_101704162	3300031706	Marine	TNWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL
Ga0315322_106412941	3300031766	Seawater	YTKVSCDANGNYFKLDLSNFEYNRDYYIEIKTIRSGVVEYFSDKDLTFTVEK
Ga0308000_102371812	3300031848	Marine	CDVNGHFFKLNLTNWEINRDYYIETKINRNGVIEYFEDKDLTFTVEL
Ga0310130_0143304_19_168	3300034073	Fracking Water	VSCDGDGNFFKLNLSNWEYNRDYYIEIKVERDGVIEYFEDKDLTFTVEK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences