NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095547

Metagenome Family F095547

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095547
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 68 residues
Representative Sequence AGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALPIRRRIKTRKQVLIRVRPDEPNPLAGVTDPVF
Number of Associated Samples 84
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.65 %
% of genes near scaffold ends (potentially truncated) 88.57 %
% of genes from short scaffolds (< 2000 bps) 89.52 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.714 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(11.429 % of family members)
Environment Ontology (ENVO) Unclassified
(24.762 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.762 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 38.71%    β-sheet: 0.00%    Coil/Unstructured: 61.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF01266DAO 7.62
PF00072Response_reg 4.76
PF04191PEMT 2.86
PF04075F420H2_quin_red 1.90
PF07681DoxX 1.90
PF00011HSP20 1.90
PF02586SRAP 1.90
PF00239Resolvase 1.90
PF00141peroxidase 0.95
PF03466LysR_substrate 0.95
PF01797Y1_Tnp 0.95
PF04014MazE_antitoxin 0.95
PF13442Cytochrome_CBB3 0.95
PF07508Recombinase 0.95
PF01274Malate_synthase 0.95
PF11867DUF3387 0.95
PF13751DDE_Tnp_1_6 0.95
PF00589Phage_integrase 0.95
PF11249DUF3047 0.95
PF01609DDE_Tnp_1 0.95
PF09084NMT1 0.95
PF13489Methyltransf_23 0.95
PF00582Usp 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 2.86
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 1.90
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 1.90
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.90
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.90
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.90
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.95
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.95
COG5421TransposaseMobilome: prophages, transposons [X] 0.95
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.95
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.95
COG3293TransposaseMobilome: prophages, transposons [X] 0.95
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.95
COG2225Malate synthaseEnergy production and conversion [C] 0.95
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.95
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.95
COG0376Catalase (peroxidase I)Inorganic ion transport and metabolism [P] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.71 %
UnclassifiedrootN/A14.29 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig570792All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101112922All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300000789|JGI1027J11758_12745450All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005167|Ga0066672_10560928Not Available740Open in IMG/M
3300005294|Ga0065705_10405341All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300005294|Ga0065705_10862712All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005332|Ga0066388_102816677Not Available888Open in IMG/M
3300005332|Ga0066388_105013318All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005332|Ga0066388_105185599All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum661Open in IMG/M
3300005344|Ga0070661_101035661All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005347|Ga0070668_100177742All Organisms → cellular organisms → Bacteria1737Open in IMG/M
3300005451|Ga0066681_10070500All Organisms → cellular organisms → Bacteria1950Open in IMG/M
3300005467|Ga0070706_101117536Not Available725Open in IMG/M
3300005526|Ga0073909_10368493All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005536|Ga0070697_100575055All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300005540|Ga0066697_10244492All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Harrisonbacteria → Candidatus Harrisonbacteria bacterium RIFOXYD1_FULL_40_91063Open in IMG/M
3300005545|Ga0070695_100594104All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria868Open in IMG/M
3300005554|Ga0066661_10127922All Organisms → cellular organisms → Bacteria1541Open in IMG/M
3300005568|Ga0066703_10268270All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1034Open in IMG/M
3300005713|Ga0066905_101910405All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005764|Ga0066903_101433475All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300005764|Ga0066903_102120934All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300005764|Ga0066903_103282273All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300005937|Ga0081455_10212487All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300006034|Ga0066656_10420740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium866Open in IMG/M
3300006358|Ga0068871_100967600Not Available791Open in IMG/M
3300006806|Ga0079220_10042192All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300006954|Ga0079219_10014837All Organisms → cellular organisms → Bacteria → Proteobacteria2735Open in IMG/M
3300006954|Ga0079219_10505583All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium848Open in IMG/M
3300006969|Ga0075419_10931512All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300006969|Ga0075419_11275568All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300007004|Ga0079218_13613284All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300009094|Ga0111539_11161138All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300009137|Ga0066709_100326137All Organisms → cellular organisms → Bacteria2098Open in IMG/M
3300009147|Ga0114129_10123888All Organisms → cellular organisms → Bacteria3554Open in IMG/M
3300009147|Ga0114129_10783003All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300009147|Ga0114129_12544269All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300009147|Ga0114129_12869631All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300009157|Ga0105092_10352566All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium834Open in IMG/M
3300009168|Ga0105104_10872758All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300010046|Ga0126384_11480988All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300010358|Ga0126370_11107326All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300010358|Ga0126370_11810090All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300010360|Ga0126372_10242662Not Available1539Open in IMG/M
3300010361|Ga0126378_12580579Not Available580Open in IMG/M
3300010362|Ga0126377_10999676All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium903Open in IMG/M
3300010376|Ga0126381_104640128All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300012349|Ga0137387_10148344All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Harrisonbacteria → Candidatus Harrisonbacteria bacterium RIFOXYD1_FULL_40_91668Open in IMG/M
3300012349|Ga0137387_11251249All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012483|Ga0157337_1005555All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300012501|Ga0157351_1005201All Organisms → cellular organisms → Bacteria → Acidobacteria1036Open in IMG/M
3300012501|Ga0157351_1006540All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300012517|Ga0157354_1067872All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012519|Ga0157352_1055826All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300012532|Ga0137373_10348846Not Available1162Open in IMG/M
3300012685|Ga0137397_10056421All Organisms → cellular organisms → Bacteria2828Open in IMG/M
3300012685|Ga0137397_10109669All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300012685|Ga0137397_10379529Not Available1053Open in IMG/M
3300012929|Ga0137404_11651685All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012944|Ga0137410_10948159All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300012948|Ga0126375_10600494Not Available840Open in IMG/M
3300012948|Ga0126375_11751543All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012957|Ga0164303_10612420All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300012984|Ga0164309_10642952Not Available834Open in IMG/M
3300012989|Ga0164305_10788420All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300015241|Ga0137418_11018834All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300015356|Ga0134073_10059717All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1044Open in IMG/M
3300015372|Ga0132256_100757433All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300015372|Ga0132256_103932568All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300016387|Ga0182040_11080475All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300017654|Ga0134069_1155718All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300018053|Ga0184626_10046547Not Available1810Open in IMG/M
3300018054|Ga0184621_10083323Not Available1115Open in IMG/M
3300018072|Ga0184635_10011843All Organisms → cellular organisms → Bacteria3061Open in IMG/M
3300018073|Ga0184624_10424793All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300018074|Ga0184640_10234206All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium832Open in IMG/M
3300018074|Ga0184640_10392756All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300018482|Ga0066669_12420963All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300022756|Ga0222622_11139983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300022756|Ga0222622_11378586All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300025931|Ga0207644_11243382Not Available626Open in IMG/M
3300026328|Ga0209802_1031357All Organisms → cellular organisms → Bacteria2788Open in IMG/M
3300026335|Ga0209804_1051056All Organisms → cellular organisms → Bacteria2018Open in IMG/M
3300026529|Ga0209806_1255011All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300026557|Ga0179587_10454824All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300027910|Ga0209583_10721033All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031198|Ga0307500_10233695All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300031226|Ga0307497_10314575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium723Open in IMG/M
3300031229|Ga0299913_10035289All Organisms → cellular organisms → Bacteria4729Open in IMG/M
3300031231|Ga0170824_106680431All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300031820|Ga0307473_10248678All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300031890|Ga0306925_11204391All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300031910|Ga0306923_11842124Not Available620Open in IMG/M
3300031912|Ga0306921_10306092All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300032003|Ga0310897_10631237All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300032076|Ga0306924_10384782All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1607Open in IMG/M
3300032174|Ga0307470_10672130All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300032174|Ga0307470_11911710All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300032261|Ga0306920_104131961All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300032783|Ga0335079_10379547All Organisms → cellular organisms → Bacteria → Proteobacteria1528Open in IMG/M
3300033412|Ga0310810_10336881All Organisms → cellular organisms → Bacteria → Proteobacteria1596Open in IMG/M
3300033412|Ga0310810_11141000All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300034176|Ga0364931_0203612All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300034354|Ga0364943_0431127All Organisms → cellular organisms → Bacteria512Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.67%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.67%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.71%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil3.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.90%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.90%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.95%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_128307902124908045SoilGLHIPGTAEIVMDRNAIWRVYRAYWKTQPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPAV
INPhiseqgaiiFebDRAFT_10111292213300000364SoilVFGTAEIVMGRDATLRVYRAYWKSHPLVMTFVALPIRRRIRNRKQVLVRVHPDEPNPLAGVTDPVV*
JGI1027J11758_1274545013300000789SoilVFGTAEIVMGRDATLRVYRAYWKSHPLVMTFVALPIRRRIRNRKQVLIRVHPDEPNPLAGVTDPVV*
Ga0066672_1056092813300005167SoilGPSVSGTGEIVMGRDAIWRVYRAYWKTHLLIMALIALPIRRRIKNRKQVLIRVSPDEPNPLAGMTHPVV*
Ga0065705_1040534123300005294Switchgrass RhizosphereNPRVVCYIGSKDGRSIPGTAEIVMGRDAAWHVYQAYWKAHPFVMAFIAFSIRRRIKTHKQVLIRVRPDEPNPLAGVTDPVV*
Ga0065705_1086271213300005294Switchgrass RhizosphereVICYIGDKEGPSVSGTAEIFMGRDAIWRVYRAYWKTHPLIMAFIAFPTRRRIRNHKEVLIRVRPNVPNPLARVTDPVV*
Ga0066388_10281667713300005332Tropical Forest SoilGSDSIWRVYRAYWKTHPLIMAFIALPIRKRIRNHKEVLIRVRPNVPNPLASVTDPVV*
Ga0066388_10501331823300005332Tropical Forest SoilMGRDAMLRAYRAYWKIYPLTMTFIGVPIRRRIRNHKQVLVRVYPDEPNPLAGVTDPVV*
Ga0066388_10518559913300005332Tropical Forest SoilEIFMGSDSIWRVYRAYWKTHPLIMAFIALSTRRRIRNHKEILIRVRPNVPNPLAGVTDPVV*
Ga0070661_10103566123300005344Corn RhizosphereAAWRVYQAYWKTHPFVMAVIAFPIQRRIKTHKQVLIRVRPDEPNPLAGVTDPVV*
Ga0070668_10017774213300005347Switchgrass RhizosphereKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0066681_1007050013300005451SoilRVICYIGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV*
Ga0070706_10111753623300005467Corn, Switchgrass And Miscanthus RhizosphereGTAEIVMGRDATLRVYRAYWKSHPLVMTFVALPIRRRIRNRKQVLIRVLSDEPNPLAGVTDPVV*
Ga0073909_1036849323300005526Surface SoilLRRNPRVICYIGDKEGPQIAGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALPIRRRIKTRKQVLIRVRPDEPNPLAGVTDPVF*
Ga0070697_10057505513300005536Corn, Switchgrass And Miscanthus RhizosphereGTAEIFMGSEAIWRVYRAYWKTHPLIMAFIAFSIRRRIRTHKQVLIRVRPNVPNPLTGVTDPIV*
Ga0066697_1024449233300005540SoilIGDKDGPLVSGPAEIVMGRNAAWRVYRAYWKMHPLIMEAFIAFSIRRRIETHKQVLIRVHPDEPNPLAGVTDPVV*
Ga0070695_10059410413300005545Corn, Switchgrass And Miscanthus RhizosphereVMGRDAVWRVYRSYWKAHPVVMTFIALPIRHRIKTRKQVLIRVRPDEPNPLAGVTDPAV*
Ga0066661_1012792223300005554SoilDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0066703_1026827023300005568SoilIGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV*
Ga0066905_10191040513300005713Tropical Forest SoilDSIWRVYRAYWKTHPLIMAFIALPIRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0066903_10143347523300005764Tropical Forest SoilMGRDTIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGATDPVI*
Ga0066903_10212093413300005764Tropical Forest SoilDKEGPSISGTAEIFMGSDSIWRVYRAYWKTHPLIMAFIALSTRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0066903_10328227323300005764Tropical Forest SoilEGPSISGTAEIFMGSDSIWRVYRAYWKTHPLIMAFIALPIRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0081455_1021248743300005937Tabebuia Heterophylla RhizosphereDKEGPSVSGTAEIFMGSDAIWRVYRAYWKMHPLIMPFIAFATRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0066656_1042074023300006034SoilGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV*
Ga0068871_10096760013300006358Miscanthus RhizosphereWRVYRAYWKTHPFVMVFLALPMRWRIKAHKNVVVRVRPDDPNPLLDITDPPA*
Ga0079220_1004219213300006806Agricultural SoilIGDGNGPSVPGTAEIVMGRDAIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGATDPVI*
Ga0079219_1001483723300006954Agricultural SoilMGRDAIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGATDPVI*
Ga0079219_1050558323300006954Agricultural SoilDKNGPSISGTAEIVMGREAMLQVYRAYWKTHRFVMTFLAVGIRFRIKTRKDLVIRVQPDEPNPLTGVTDPVI*
Ga0075419_1093151213300006969Populus RhizosphereKLSAHGGTRAQYYIGDKAGLHIPGTAEIVIDRNAIWRVYRAYWKTHPLNMALVAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPPV*
Ga0075419_1127556813300006969Populus RhizosphereNPRVICYIGDKEGPSVSGTAEIFMGRDAIWRVYRAYWKTHPLIMAFIAFPTRRRIRNHKEVLIRVRPNVPNPLARVTDPVV*
Ga0079218_1361328413300007004Agricultural SoilLHIPGTAEIVMGKNAIWRVYRAYWKTHPLIMALIAFSVRRRIESRKQVLIRVHPDEPNPLAGVTDPAV*
Ga0111539_1116113813300009094Populus RhizosphereIAGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALPIRWRIKTRKQVLIRVRPDEPNPLAGVTDPVL*
Ga0066709_10032613713300009137Grasslands SoilRVVCYLGSKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0114129_1012388833300009147Populus RhizosphereGDTDGPSVPGTAEIVMGRDATLCVYRAYWKSHPLVMAFVALPIRRRIGNRKQVLIRVLPDEPNPLAGVTDPAV*
Ga0114129_1078300313300009147Populus RhizosphereEAIWRVYRAYWKTHPLIMAFIAFSIRRRIRTHKQVLIRVRPNVPNLLAGVTDPIV*
Ga0114129_1254426923300009147Populus RhizosphereMGRNAIWRVYRAYWKTQPLIMALIAFSIRRRIETRKQVLIRVHRDEPNPLAGVTDPAV*
Ga0114129_1286963113300009147Populus RhizosphereMGRNAIWRVYRAYWKTQPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPPV*
Ga0105092_1035256613300009157Freshwater SedimentISVIRKVRLVSGTAEIYMGSDAIWRVYRAYWKTHPLIMPFIAFPIRRRIRNHKQVLIRVRPNVPNPLAGVTDPVV*
Ga0105104_1087275813300009168Freshwater SedimentRRNPRTVCYIGDKERPQITGTAEIVMGKKAIWRVYRAYWKTHPLVMALIAFSIRRRIGTRKQVLIRVHPDEPNPLAGVTDPAV*
Ga0126384_1148098813300010046Tropical Forest SoilSISGTAEIFMGSDSIWRVYRAYWKTHPLIMAFIALPIRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0126370_1110732623300010358Tropical Forest SoilTAEIVMGRDAIWRVYRAYWKTHSFIMAFIALPIRRRIRNRKNVLIRVHPDEPNPLAGVTDPLV*
Ga0126370_1181009013300010358Tropical Forest SoilAEIFMGSDSIWRVYRAYWKTHPLIMAFIALPTRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0126372_1024266213300010360Tropical Forest SoilSIWRVYRAYWKTHPLIMAFIALPIRKRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0126378_1258057913300010361Tropical Forest SoilVVIGRDAIWRVYQAYWKTHPLIMIFIALSIRRRIRNRKDVLIRVQPDEPNALAGVTDPVV
Ga0126377_1099967633300010362Tropical Forest SoilMGREAMLRVYRAYWETHRFVMTFLAVGIRFRIKTRKDVVIRVHPDAPNPLAGVTDPVL*
Ga0126381_10464012813300010376Tropical Forest SoilVICYIGDKEGPHIPGNADIVMGRDPIWRVYHAYWKTHPLIMAFIAFATRRRIRNRKDVLIRVRPDEPNPLAGVTDPVV*
Ga0137387_1014834413300012349Vadose Zone SoilMRLTLYVCHIGHKDGPLVSGTAEILMGRDAMWRVYRASWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTEPVI*
Ga0137387_1125124913300012349Vadose Zone SoilPHVICYIGDKDGPSVSGTAEIIIGRDAAWRVYRAYWKMHPLIMAFIAFSIRRRIETHKQVLIRVRPDEPNPLASVTDPVV*
Ga0157337_100555513300012483Arabidopsis RhizosphereVRANPRVVCYLGSKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0157351_100520123300012501Unplanted SoilNPRVVCYIGSKDGPSISGTAEIVMGRDAAWHVYQVYWKTHPFVMTFIAFPIRRRIKTHKQVLIRVRPDEPNPLAGVTDP*
Ga0157351_100654013300012501Unplanted SoilSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0157354_106787223300012517Unplanted SoilYIGSKDGPSISGTAEIIMGRDAAWRVYQAYWKTHPFVMAVIAFPIQRRIKTHKQVLIRVRPDEPNPLAGVTDP*
Ga0157352_105582613300012519Unplanted SoilRVICYIGDKDGPCIPGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALPIRRRIKTRKQVLIRVRPDEPNPLAGVTDPVL*
Ga0137373_1034884613300012532Vadose Zone SoilKDGPSVSGTAEIVMGRDATLRVYRAYWKSHPLVMTFVALPIRRRIGTHKQVLIRVRPDEPNPLASVTDPAV*
Ga0137397_1005642143300012685Vadose Zone SoilAEIVMGGNAIWRVYRAYRKTHPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPPV*
Ga0137397_1010966913300012685Vadose Zone SoilRYSRAICYIGDKDGPSISGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0137397_1037952923300012685Vadose Zone SoilKEGPQIPGTAEIVMERNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPMV*
Ga0137404_1165168523300012929Vadose Zone SoilEIFMGSEAIWRVYRAYWKTHPLIMAFIAFSIRRRIRTHKQVLIRVRPNVPNPLTGVTDPIV*
Ga0137410_1094815923300012944Vadose Zone SoilCYLGSKDGSSIAGTAEIVMGSDAMCRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0126375_1060049413300012948Tropical Forest SoilIPGTGYRAYWKTHPLIMALFAFSIRKRIDRKRIETHKQVLIRVHPDEPNPLAGVTDLVV*
Ga0126375_1175154323300012948Tropical Forest SoilEIFMGSDSIWRVYRAYWKTHPLIMAFIALPTRRRIRNHKEVLIRVRPNVPNPLAGVTDPVV*
Ga0164303_1061242013300012957SoilPSISGTAEIIMGRVAAWRVYQAYWKTHPFVMAVMAFPIQRRIKTHKQVLIRVRPDEPNPLAGVTDP*
Ga0164309_1064295223300012984SoilTVCYIGDKEGPQIPGTAETVMGKNAIWRVYRAYWKTHPLIMVFIAFSVRRRIGTHKQVLIRVHPDEPNPLAGVTDPMV*
Ga0164305_1078842023300012989SoilRVICYIGDKEGPHIPGTAEIVMGRNAIWRVYRAYWKTHPLIMVFIAFSVRRRIGTHKQVLIRVHPDEPNPLAGVTDPMV*
Ga0137418_1101883423300015241Vadose Zone SoilVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV*
Ga0134073_1005971713300015356Grasslands SoilEIVMDRTAIWRVYRAYRKTHPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPAV*
Ga0132256_10075743333300015372Arabidopsis RhizosphereLRRRLTLYESSSDKEGPQIAGTAEIVMGRDALWRVYRAYWKTHPLVMPVIALPIRWRIKTRKQVLIRVRPDEPNPLAGVTDPVL*
Ga0132256_10393256813300015372Arabidopsis RhizosphereGRDAAWRVYQAYWKTHPFVMAVIAFPIRRRIKTHKQVLIRVRPDEPNPMGGVTDPVV*
Ga0182040_1108047523300016387SoilMGRDASWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLVRVHPDEPNPLAGATEPVI
Ga0134069_115571813300017654Grasslands SoilRVICYVGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV
Ga0184626_1004654713300018053Groundwater SedimentIWRVYRAYWKTHPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPMV
Ga0184621_1008332313300018054Groundwater SedimentRVYRAYWKTHPLIMALIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTVPAV
Ga0184635_1001184313300018072Groundwater SedimentICYIGDKEGPQIAGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALLIRRRIKTRKQVLILVRPDEPNPLAGVTDPVF
Ga0184624_1042479313300018073Groundwater SedimentAEIVMGRNAARRVYRAYWKTHPLIMVFIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPAV
Ga0184640_1023420623300018074Groundwater SedimentDALWRVYRAYWKTHPLVMAVIALLIRRRIKTRKQVLIRVHPDEPNPSAGMTDPVF
Ga0184640_1039275623300018074Groundwater SedimentGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLMRVRPDEPNPLAGVTDPVV
Ga0066669_1242096313300018482Grasslands SoilAPRAICYIGDKDGPSIPGAAEILMGRDAMWRVYRASWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV
Ga0222622_1113998323300022756Groundwater SedimentPQIAGTAEIVMGRDALWRVYRVYWKTHPLVMAVIALPVRRRIKTRKQVLIRVRPDEPNPLAGVTDPVF
Ga0222622_1137858623300022756Groundwater SedimentGSKDGPSIAGTAEIVMGSDAMWRAYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV
Ga0207644_1124338213300025931Switchgrass RhizosphereVMGSGALWRVYRAYWKTHPFVMVFLALPMRWRIKAHKNVVVRVRPDDPNPLLDITDPPA
Ga0209802_103135753300026328SoilYIGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV
Ga0209804_105105643300026335SoilKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV
Ga0209806_125501123300026529SoilIGDKEGPQIPGTAEIVMGRNAIWRVYRAYWKTHPLIMALIAFSIRRRIETRKRVLVRVHPDEPNPLAGVTDPAV
Ga0179587_1045482423300026557Vadose Zone SoilVCYLGSKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV
Ga0209819_1026651323300027722Freshwater SedimentRIRRDPCVICYIGDKEGAHIPGTAEIVMGRNAIWRVYRANWKSHPLIMPLIAVSIRRRIGTHKQVLIRVHPDEPNPLAGVTDPAV
Ga0209583_1072103313300027910WatershedsMGRNAIWRVYRAYWKTHPLIMLLIAFSIRRRIENRKQVLIRVNPDEPNPLAGVTDPPV
Ga0307500_1023369523300031198SoilICYLGSKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV
Ga0307497_1031457523300031226SoilAGTAEIVMGRDALWRVYRAYWKTHPLVMAVIALPIRRRIKTRKQVLIRVRPDEPNPLAGVTDPVF
Ga0299913_1003528973300031229SoilGDKDGLSVVGTAEVVMGRDAVCRVYRAYWKTHPLVMTIIAFAIRRRIRNRKQVLVRVRPDEPNPLTGVMDPVV
Ga0170824_10668043123300031231Forest SoilTAEIFMGSDAIWRVYRAYWKTHPLIMAFIAFSIRRRIRTHKQVLIRVRPNVPNPLTGVTDPIV
Ga0307473_1024867823300031820Hardwood Forest SoilVVCYLGSKDGPSIAGTAEIVMGSDAMWRVYRAYWKTHPLVMAVIALATRRRIKTHKDVLIRVRPDEPNPLAGVTDPVV
Ga0306925_1120439113300031890SoilGDKEGPHIPGAAEIVMGRNAIWRVYRAYWKTHPLIMAFIAFSIRRRIGTHKQVLIRIHPDEPNPLAGVTDPTVS
Ga0306923_1184212423300031910SoilTAEIVIGRDAAWHGYQAYWKTHPFVMAVIALPIRRRLKTHKQVLIRVHPDEPNPLASVTDPVV
Ga0306921_1030609233300031912SoilMGRDAIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGATDPVI
Ga0310897_1063123713300032003SoilDAAWHVYQAYWKTHPFVMTFIAFPIRRRIKTHKQVLIRVRPDEPNPLAGVTDPMV
Ga0306924_1038478213300032076SoilSGTAEIVIGRDAAWHGYQAYWKTHPFVMAVIALPIRRRLKTHKQVLIRVHPDEPNPLASVTDPVV
Ga0307470_1067213013300032174Hardwood Forest SoilMGKNAIWRVYRAYWKTHPLIMALIAFSIRRRIENRKQVLIRVNPDEPNPLAGVTDPPV
Ga0307470_1191171013300032174Hardwood Forest SoilIGDKEGPHIPGTAEIVMGRNAIWRVYRAYWKTHPLIMVFIAFSVRRRIGTHKQVLIRVHPDEPNPLAGVTDPMV
Ga0306920_10413196113300032261SoilMGRDAIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGAT
Ga0335079_1037954713300032783SoilGTAEIVMGKDAIWRVYRANWKTHSLVMAFIALPTRRRIRNGKNILIRVQPDEPNPLAGVTDPVV
Ga0310810_1033688113300033412SoilVPGTAEFVMGRDAIWRVYRAYWKTHPAIMVFIAFSIRRRIGTRKQVLIRVHPDEPNPLAGATDPVI
Ga0310810_1114100023300033412SoilVCYIGSKDGPSISGTAEIIMGRDAAWRVYQAYWKTHPFVMAVIAFPIQRRIKTHKQVLIRVRPDEPNPLAGVTDP
Ga0364931_0203612_46_2223300034176SedimentMGKNAARRVYRAYWKTHPLIMVLIAFSIRRRIETRKQVLIRVHPDEPNPLAGVTDPAV
Ga0364943_0431127_2_1633300034354SedimentIWRVYRAYWKTHPLIMAFIAFSIRRRIRTHKQVLIRVRPNVPNPLTGVTDPIV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.