Basic Information | |
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Family ID | F095530 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 105 |
Average Sequence Length | 43 residues |
Representative Sequence | MSTCDITSGFTLGCRDNTGGIANIYILSGSIDSVTDASEGLIQTI |
Number of Associated Samples | 88 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 24.10 % |
% of genes near scaffold ends (potentially truncated) | 78.10 % |
% of genes from short scaffolds (< 2000 bps) | 69.52 % |
Associated GOLD sequencing projects | 81 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.17 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | unclassified viruses (65.714 % of family members) |
NCBI Taxonomy ID | 12429 |
Taxonomy | All Organisms → Viruses → unclassified viruses |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (31.429 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.905 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (64.762 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.17 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Lake Freshwater Freshwater Lake Freshwater, Surface Ice Sediment Marine Plankton Marine Marine Sediment Deep Subsurface Marine Aqueous Seawater Sea-Ice Brine Marine Salt Marsh Estuarine Water Pelagic Marine Seawater Marine Seawater Sediment Marine Harbor Saline Water Pond Water Saline Water And Sediment Sediment Soil Macroalgal Surface Epidermal Mucus |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100214811 | 3300000115 | Marine | MACDISSGFSLACRDNSGGIKNIYILSGSVSTVTEASEGLIS |
DelMOSpr2010_102004141 | 3300000116 | Marine | MSTCDITSGFTLGCRDNTGGIRNIYILSGSVDSVTGSGATGL |
BBAY94_100080561 | 3300000949 | Macroalgal Surface | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDTITDASEGLIN |
BBAY88_10400472 | 3300001183 | Macroalgal Surface | MACDISSGFSLACRDNSGGIKNIYILSGSTPVISESSEGLISDL |
RCM30_10538811 | 3300001842 | Marine Plankton | MACSITAGFQLGCRNNTGGIKNIYILSGSISSISGSQGL |
Ga0066177_104680841 | 3300004096 | Freshwater Lake | MACEISSGFTLGCRDNTGGIKNIYILSGSITATNGTEGLITSI |
Ga0066612_13001702 | 3300004642 | Marine | MSTCDITSGFTLGCRDNTGGIKNLYILSGSISSVADASEGLINGITGSG |
Ga0007759_115121972 | 3300004836 | Freshwater Lake | MPCAITSGFQLGCRDNTGGIKNIYILSGSISNITGSQGLITSIS |
Ga0074647_10478281 | 3300005611 | Saline Water And Sediment | MATCDITSGFTLGCRDNTGGIRKLYILSGSISSVSGSTGYIESI |
Ga0075483_12708072 | 3300006373 | Aqueous | MSCQITSGRSIPCRQSLGGIKNIYILSGSVAGTTAA |
Ga0075510_109645531 | 3300006405 | Aqueous | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDTIVDASEGLISEMTGS |
Ga0075486_10081382 | 3300006425 | Aqueous | MSCQITSGRSIPCRQSLGGIKNIYILSGSVAGVTAASG |
Ga0070749_100733904 | 3300006802 | Aqueous | MSTCDITSGFTLGCRDNTGGIANIYILSGSIDSVTD |
Ga0070749_101638413 | 3300006802 | Aqueous | MSCQITSGRSILCRQSLGGIKNIYILSGSVAGVTAASGAIS |
Ga0070749_102346631 | 3300006802 | Aqueous | MSTCDITSGFTLGCRDNTGGIANIYILSGSIDSVTDASEGLIQTI |
Ga0070754_102366952 | 3300006810 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSITSVAD |
Ga0070754_104133722 | 3300006810 | Aqueous | MSTCDITSGFTLGCRDNTGGIKNVYILSGSVDSVTGS |
Ga0075463_100872142 | 3300007236 | Aqueous | MSSCDITSGFTLGCRDNTGGLKNIYILSGSISSTSGTTGLLSAV |
Ga0070745_11431441 | 3300007344 | Aqueous | MSTCDITSGFTLGCRDNTGGIRNLYILSGSVAGLTG |
Ga0070753_10594193 | 3300007346 | Aqueous | MACDITSGFTLGCRDNSGGIKNIYILSGSVAGITEASEGLISDISG |
Ga0070753_10887881 | 3300007346 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSITTVAD |
Ga0070753_12097581 | 3300007346 | Aqueous | SGFTLGCRDNSGGIKNIYILSGSVAGITEASEGLISDISG* |
Ga0099851_11028191 | 3300007538 | Aqueous | MSTCDITSGFTLGCRDNTGGLKNIYILSGSISSTSGTTGLLSQISGSG |
Ga0099851_12586221 | 3300007538 | Aqueous | MATCDITSGFTLGCRDNSGGIKNIYILSGSITSIDEVSDGLISAISGSGTFF |
Ga0099846_12412442 | 3300007542 | Aqueous | MACDITSGFTLGCRDNVGSIKQIYILSGSVTSVVDASEGLI |
Ga0099846_12849761 | 3300007542 | Aqueous | MSSCDITSGFTLGCRDNTGGLKNIYILSGSISSTS |
Ga0102963_13312181 | 3300009001 | Pond Water | MSTCDITSGFTLGCRDNSGGIKNLYILSGSITSVGDASEGLINSISGSG |
Ga0118687_101819932 | 3300009124 | Sediment | MSCDITSGFTLGCRDNTGGLKNIYILSGSISSTGGATGLLDAISG |
Ga0115545_10793413 | 3300009433 | Pelagic Marine | MSTYDITSGFTLGCRDNTGGIANLYILSGSITSVTDA |
Ga0118731_1085166932 | 3300010392 | Marine | MACDITSGFTLGCRDNSGGIKNVYILSGSISTVNEVSDGLISGIT |
Ga0114922_111605961 | 3300011118 | Deep Subsurface | MSCDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGL |
Ga0129326_14484501 | 3300012522 | Aqueous | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDSVTGSGDVGLITAISGS |
Ga0129331_14884331 | 3300012524 | Aqueous | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDSVTGSGDVGLITAISGSGTF |
Ga0157498_10527591 | 3300012666 | Freshwater, Surface Ice | MPTPCQITSGFTLGCRDNVGSIKNIYILSGSITAVN |
Ga0129340_11074642 | 3300012963 | Aqueous | MATCDITSGFTLGCRDNTGGLKNIYILSGSVDSVTGSGATGLITAIS |
(restricted) Ga0172367_101915331 | 3300013126 | Freshwater | MSCDITSGFQLGCRDNTGGLKAIYILSGSITSISGSQGLITAISGSG |
(restricted) Ga0172365_100850534 | 3300013127 | Sediment | MACSITSGFQLGCRDNTGGIKNIYILSGSISSISGSQGLITAISGS |
(restricted) Ga0172365_105162192 | 3300013127 | Sediment | MSCDITSGFQLGCRDNTGGLKALYILSGSITTINTAADGT |
Ga0117790_10707182 | 3300014042 | Epidermal Mucus | MACDITSGFQLGCRDNTGGLKAIYILSGSIETIDGTQGLIT |
(restricted) Ga0172376_102670451 | 3300014720 | Freshwater | MPAPCQITSGYTLGCRDNIGSIKNIFILSGSVTAVVAPTEGLITQ |
Ga0182085_10746042 | 3300016723 | Salt Marsh | MSTCDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGLLNELSGSGTF |
Ga0182085_11439471 | 3300016723 | Salt Marsh | MACDVTAGFQLGCRDNSGGIKSVYILSGSVTTVTESSGEITDISG |
Ga0182045_14076311 | 3300016726 | Salt Marsh | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDSVVGS |
Ga0182094_13376171 | 3300016731 | Salt Marsh | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDTITDASEGLINAISGSGTF |
Ga0182057_14281813 | 3300016732 | Salt Marsh | MSTCDITSGFSLGCRDNSGGIKNLFILSGSISAVADESEGLINSISGS |
Ga0182092_10740322 | 3300016734 | Salt Marsh | MACDVTAGFQLGCRDNSGGIKSVYILSGSITTITESSDEITDI |
Ga0182095_11699831 | 3300016791 | Salt Marsh | MSTCDISSGFTLGCRDNSGGIKNIYILSGSIDTITDAS |
Ga0181391_10756281 | 3300017713 | Seawater | MACDITSGFQLGCRDNMGGLRQIYILSGSVVSVTGATNGLITDISG |
Ga0181347_11002992 | 3300017722 | Freshwater Lake | MPCAITSGFQLGCRDNTGGIKNIYILSGSISSISGSQGL |
Ga0181419_10816052 | 3300017728 | Seawater | MACDITSGFQLGCRDNSGGISNIYILSGSVTSVTEASGEITDLSGDGV |
Ga0181399_10288471 | 3300017742 | Seawater | MACDITSGFTLGCRDNSGGIKNIYILSGSIDTVTGYENGYITD |
Ga0181346_12619322 | 3300017780 | Freshwater Lake | MPCAITSGFQLGCRDNTGGIKNIYILSGSISSISGSQGLI |
Ga0181607_100728744 | 3300017950 | Salt Marsh | MSTCDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGLL |
Ga0181564_107260952 | 3300018876 | Salt Marsh | MACDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGT |
Ga0182077_16246032 | 3300019281 | Salt Marsh | MACEITSGFTLECRDNAGGIKNIYILSGSIAGTTGETNGLLTDISG |
Ga0182058_12206911 | 3300019283 | Salt Marsh | MSTCDITSGFSLGCRDNSGGIKNLFILSGSISAVADESEG |
Ga0181562_105259141 | 3300019459 | Salt Marsh | MACDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGLID |
Ga0181359_11362172 | 3300019784 | Freshwater Lake | MPCAITSGFQLGCRDNTGGIKNIYILSGSISSISGSQGLITSISG |
Ga0182044_14409421 | 3300020014 | Salt Marsh | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDTVTDESTGLIGALSGSGT |
Ga0206131_100289791 | 3300020185 | Seawater | MSCDITSGFTLGCRDNTGGIANLYILSGSIDSVVDASEGLIET |
Ga0206131_101521313 | 3300020185 | Seawater | MSTCDITSGFTLGCRDNTGGIANLYILSGSIDSVVDASEGLIET |
Ga0206131_101879191 | 3300020185 | Seawater | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDTIVDASEG |
Ga0181604_104235162 | 3300020191 | Salt Marsh | MSTCDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGLLN |
Ga0181598_13187912 | 3300020810 | Salt Marsh | MSTCDITSGFTLGCRDNTGGLKNIYILSGSIDSTSGTTGL |
Ga0194123_102802581 | 3300021093 | Freshwater Lake | MSCDITSGFTLGCRDNVGSIKQIYILSGSVTNVVDASEGLINAITGSG |
Ga0222718_103208862 | 3300021958 | Estuarine Water | MATCDITSGFTLGCRDNTGGIRKLYILSGSISSVSGSTGYIESISGSGD |
Ga0222714_105742971 | 3300021961 | Estuarine Water | MSTCDITSGFTLGCRDNSGGIKNIYILSGSITTISEVSDGLIGGI |
Ga0222713_102740751 | 3300021962 | Estuarine Water | MACDITSGLTLGCRDNVGSIKQIYILSGSVSNVTDASEGLINSITGSGVF |
Ga0196883_10340421 | 3300022050 | Aqueous | MSTCDITSGFTLGCRDNTGGIANIYILSGSIDSVTDASEK |
Ga0212024_10148473 | 3300022065 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSITSVTDASEGLSFFFSFP |
Ga0212024_10228872 | 3300022065 | Aqueous | MSTCDITSGFTLGCRDNTGGIRNIYILSGSVDSVTGSGASYP |
Ga0212021_10950551 | 3300022068 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSITSVVDASEGL |
Ga0196885_1038192 | 3300022140 | Aqueous | MSCQITSGRSIPCRQSLGGIKNIYILSGSVAGTTAASGAISDISGSK |
Ga0196897_10317651 | 3300022158 | Aqueous | MSTCDIASGFTLGCRDNTGGLKNIYILSGSISSTSGTTGLLSQVSSSG |
Ga0212027_10117571 | 3300022168 | Aqueous | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDSVTGSGTTGLISAMSG |
Ga0224504_102538932 | 3300022308 | Sediment | MACDISSGFQLGCRDNSGGIQNVYILSGSVTSVTDSSGEISTIS |
Ga0222673_10087624 | 3300022821 | Saline Water | MSCNITKGFELGCRDNTGGIKRAYILGGSITSVTVADVATAPF |
Ga0214923_103082741 | 3300023179 | Freshwater | MPSPCQITSGTTLGCRDNVGSIKNIWILSGSITNIVETSEGLITQITGSAGSQFWK |
Ga0208793_10861991 | 3300025108 | Marine | MSCDITSGFELGCRDNSGGIKNLYILGASGSVAGTIESVTDASE |
Ga0208303_10815021 | 3300025543 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSIDSVTDA |
Ga0208643_11299411 | 3300025645 | Aqueous | MSTCDIIAGFTLGCRDNVGGITNLYILSGSITTVN |
Ga0209653_11977592 | 3300025695 | Marine | MACDITSGFELGCRDNAGGIKNLYILSGSIDTITGADSGLISDV |
Ga0209137_11653441 | 3300025767 | Marine | MSCDITSGFTLGCRDNTGGLKNIYILSGSVDSTSGTTGLL |
Ga0208767_11106052 | 3300025769 | Aqueous | MSTCDITSGFTLGCRDNTGGIKNLYILSGSIDTVTDASEGVISGITGSGG |
Ga0208767_11490482 | 3300025769 | Aqueous | MSCQITSGRSIPCRQSLGGIKNIYILSGSVAGVTAASGAIS |
Ga0208645_10550541 | 3300025853 | Aqueous | MSTCDITSGFTLGCRDNTGGIANLYILSGSITSVADASEGLISGITGSGEF |
Ga0208645_12128242 | 3300025853 | Aqueous | MACDITSGFTLGCRDNSGGIKNIYILSGSIAGITEASEGLISDISGSG |
Ga0209929_10542812 | 3300026187 | Pond Water | MSTCDITSGFTLGCRDNTGGIKNIYILSGSVDSVTGSGADGLI |
Ga0209929_11356492 | 3300026187 | Pond Water | MATCDITSGFTLGCRDNTGGITNLYILSGSIDTVTTASEGLIDAI |
Ga0247600_11088921 | 3300026461 | Seawater | MSTCDITSGFSLGCRDNTGGIANLYILSGSIDSVVDASEGLIETISG |
Ga0209536_1029159131 | 3300027917 | Marine Sediment | MSTCDITSGFTLGCRDNTGGIKNVYILSGSVDTVTGSGSTGLISAISGS |
Ga0256368_10735331 | 3300028125 | Sea-Ice Brine | MSTCDITSGFTLGCRDNVGGITNLYILSGSITTVTDVSDG |
Ga0228648_10880192 | 3300028126 | Seawater | MACNISSGFTLACRDNSGGIKNIYILSGSVSSVVEASEGL |
(restricted) Ga0247844_10503691 | 3300028571 | Freshwater | MSCQITSGFTLGCRDNTGGIKSVYILSGSVTSVTDASEGLINAITA |
Ga0135227_10344141 | 3300029302 | Marine Harbor | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDTITDASETTND |
Ga0307380_101016404 | 3300031539 | Soil | MSSCDITSGFTLGCRDNTGGLKNIYILSGSISSTSGTTGLLSAISGSGT |
Ga0307379_103798451 | 3300031565 | Soil | MSTCDITSGFTLGCRDNTGGIANLYILSGSITSVTDASEGLISGITGSGEF |
Ga0307376_100287241 | 3300031578 | Soil | MSTCDITSGFTLGCRDNTGGIKNLYILSGSIDTIDTASEGLINGITGSGV |
Ga0307375_102816911 | 3300031669 | Soil | MATCDITSGFTLSCRDNSGGIRNLYILSGSVSSITNASEGLINAMTGSG |
Ga0307377_101490971 | 3300031673 | Soil | MACDITSGFALGCRDNTGGITNLYILSGSITTVNTVSEGLING |
Ga0307377_101513551 | 3300031673 | Soil | MSTCDITSGFTLGCRDNSGGIKNLYILSGSIDTLGTASEGLINAM |
Ga0307377_106199401 | 3300031673 | Soil | MSTCDITSGFTLGCRDNSGGIKNLYILSGSVDSIATA |
Ga0335028_0638097_431_565 | 3300034071 | Freshwater | MSTTCDIVSGFTLGCRDNTGGLKNIYILSGSISSTGGTEGLISTI |
Ga0335027_0040352_3_155 | 3300034101 | Freshwater | MPAGCDITSGFALGCRDNTGGIRNIYILSGSISNITYQSSAQGLITGISGS |
Ga0335048_0075228_1_105 | 3300034356 | Freshwater | MACDITSGFQLGCRDNTGGLKSIYILSGSITSVSG |
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